Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene98670.t1 | AES79590.1 | 94.6 | 350 | 19 | 0 | 1 | 350 | 1 | 350 | 6.20E-195 | 689.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene98670.t1 | G7KT89 | 94.6 | 350 | 19 | 0 | 1 | 350 | 1 | 350 | 4.5e-195 | 689.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene98670.t1 | MTR_7g070100 | 94.571 | 350 | 19 | 0 | 1 | 350 | 1 | 350 | 0.0 | 665 |
MS.gene98670.t1 | MTR_4g133490 | 60.458 | 349 | 132 | 4 | 3 | 348 | 1 | 346 | 2.26e-136 | 392 |
MS.gene98670.t1 | MTR_3g006120 | 58.309 | 343 | 139 | 4 | 8 | 347 | 8 | 349 | 5.89e-136 | 391 |
MS.gene98670.t1 | MTR_3g006100 | 57.849 | 344 | 141 | 4 | 8 | 348 | 8 | 350 | 2.55e-135 | 389 |
MS.gene98670.t1 | MTR_3g006140 | 55.460 | 348 | 151 | 4 | 5 | 349 | 27 | 373 | 1.82e-129 | 375 |
MS.gene98670.t1 | MTR_3g006180 | 57.522 | 339 | 140 | 4 | 14 | 349 | 1 | 338 | 2.71e-129 | 374 |
MS.gene98670.t1 | MTR_3g006010 | 56.105 | 344 | 147 | 4 | 7 | 347 | 124 | 466 | 1.43e-128 | 376 |
MS.gene98670.t1 | MTR_4g133320 | 59.871 | 309 | 118 | 4 | 43 | 348 | 1 | 306 | 2.39e-115 | 337 |
MS.gene98670.t1 | MTR_3g045700 | 53.693 | 352 | 149 | 8 | 6 | 350 | 6 | 350 | 2.50e-114 | 336 |
MS.gene98670.t1 | MTR_3g068220 | 51.695 | 354 | 158 | 6 | 5 | 348 | 5 | 355 | 7.44e-112 | 330 |
MS.gene98670.t1 | MTR_6g091830 | 49.438 | 356 | 165 | 7 | 6 | 350 | 104 | 455 | 1.47e-107 | 322 |
MS.gene98670.t1 | MTR_7g083950 | 53.390 | 354 | 148 | 10 | 5 | 350 | 88 | 432 | 1.18e-106 | 319 |
MS.gene98670.t1 | MTR_6g092140 | 49.157 | 356 | 166 | 7 | 6 | 350 | 104 | 455 | 1.90e-106 | 319 |
MS.gene98670.t1 | MTR_1g100280 | 48.023 | 354 | 138 | 11 | 9 | 350 | 18 | 337 | 6.46e-90 | 273 |
MS.gene98670.t1 | MTR_6g088340 | 47.468 | 316 | 147 | 9 | 46 | 348 | 122 | 431 | 1.84e-85 | 265 |
MS.gene98670.t1 | MTR_3g085910 | 44.860 | 321 | 115 | 6 | 5 | 312 | 4 | 275 | 2.29e-83 | 254 |
MS.gene98670.t1 | MTR_6g011110 | 48.746 | 279 | 130 | 4 | 82 | 350 | 2 | 277 | 2.47e-82 | 251 |
MS.gene98670.t1 | MTR_3g086480 | 49.027 | 257 | 122 | 5 | 88 | 341 | 2 | 252 | 2.42e-74 | 230 |
MS.gene98670.t1 | MTR_1g109340 | 51.779 | 253 | 113 | 4 | 102 | 349 | 106 | 354 | 3.14e-73 | 231 |
MS.gene98670.t1 | MTR_1g109520 | 55.696 | 158 | 65 | 3 | 197 | 349 | 19 | 176 | 1.06e-46 | 157 |
MS.gene98670.t1 | MTR_1g089620 | 58.974 | 117 | 46 | 1 | 178 | 294 | 34 | 148 | 9.30e-40 | 142 |
MS.gene98670.t1 | MTR_1g089085 | 53.571 | 140 | 59 | 3 | 5 | 142 | 40 | 175 | 2.83e-37 | 132 |
MS.gene98670.t1 | MTR_1g109090 | 54.622 | 119 | 52 | 2 | 6 | 122 | 18 | 136 | 3.26e-34 | 123 |
MS.gene98670.t1 | MTR_0128s0040 | 51.471 | 136 | 65 | 1 | 33 | 168 | 3 | 137 | 7.67e-34 | 122 |
MS.gene98670.t1 | MTR_6g023220 | 27.666 | 347 | 236 | 8 | 8 | 347 | 17 | 355 | 2.13e-31 | 122 |
MS.gene98670.t1 | MTR_1g106050 | 58.000 | 100 | 41 | 1 | 3 | 101 | 1 | 100 | 2.49e-30 | 112 |
MS.gene98670.t1 | MTR_1g012330 | 53.571 | 112 | 52 | 0 | 90 | 201 | 10 | 121 | 1.65e-29 | 114 |
MS.gene98670.t1 | MTR_1g093300 | 52.475 | 101 | 46 | 2 | 181 | 280 | 7 | 106 | 1.37e-25 | 100 |
MS.gene98670.t1 | MTR_6g091850 | 46.535 | 101 | 48 | 3 | 256 | 350 | 1 | 101 | 6.69e-19 | 81.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 76 sgRNAs with CRISPR-Local
Find 86 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACCTTCTTTCTTCTTCTAAA+AGG | 0.124409 | 7.1:-31794907 | None:intergenic |
TCCAAACTTCTTCATATTCT+AGG | 0.200364 | 7.1:+31794743 | MS.gene98670:CDS |
GAAGAAGTTTGGAAAATTAA+AGG | 0.234327 | 7.1:-31794733 | None:intergenic |
GATGATCTCTTTCAATTTGC+TGG | 0.255762 | 7.1:+31794646 | MS.gene98670:CDS |
GAAATGATATCTAGCATTTC+CGG | 0.264535 | 7.1:-31794607 | None:intergenic |
GCTTGAAGATGGGTAGCTTT+TGG | 0.282022 | 7.1:+31794809 | MS.gene98670:CDS |
GTCTATCAATCTCGCGATTC+TGG | 0.288124 | 7.1:+31795054 | MS.gene98670:CDS |
CCCTAGAATATGAAGAAGTT+TGG | 0.288192 | 7.1:-31794744 | None:intergenic |
ATCATCGAAATCTAGATTCT+TGG | 0.315769 | 7.1:-31794629 | None:intergenic |
CGAAAACACATTGTGCCTTC+TGG | 0.321255 | 7.1:+31795510 | MS.gene98670:CDS |
TTCCAGCTTCTCATAATTCA+TGG | 0.322422 | 7.1:-31795337 | None:intergenic |
TTCTAGTGGCTATCTAATTA+TGG | 0.328308 | 7.1:+31794852 | MS.gene98670:CDS |
CGGTAACTTTCTCGTGCCTT+AGG | 0.343966 | 7.1:+31795232 | MS.gene98670:CDS |
TCTTCAAGCGGTAAGCTCTT+TGG | 0.347884 | 7.1:-31794795 | None:intergenic |
TTTGGGGATATTCCTATTCC+GGG | 0.388542 | 7.1:+31794827 | MS.gene98670:CDS |
TTTGGAAAATTAAAGGTGCT+TGG | 0.394702 | 7.1:-31794726 | None:intergenic |
TACACATCCAATACTTTCTC+GGG | 0.395877 | 7.1:-31795297 | None:intergenic |
GTACACATCCAATACTTTCT+CGG | 0.396731 | 7.1:-31795298 | None:intergenic |
TGCAGAATGCCATGTGTATT+CGG | 0.401310 | 7.1:+31795470 | MS.gene98670:CDS |
CCTTCTTTCTTCTTCTAAAA+GGG | 0.403461 | 7.1:-31794906 | None:intergenic |
CAAACTTCTACTGGTTAGAT+TGG | 0.405019 | 7.1:+31795556 | MS.gene98670:CDS |
TATGAGAAGCTGGAAACTTT+GGG | 0.406395 | 7.1:+31795345 | MS.gene98670:CDS |
TTGGAAAATTAAAGGTGCTT+GGG | 0.406624 | 7.1:-31794725 | None:intergenic |
CTCTCATATCCCCACCTGCT+CGG | 0.408009 | 7.1:-31795420 | None:intergenic |
ATGGAATGTTGTGGACTTTG+TGG | 0.412572 | 7.1:+31795107 | MS.gene98670:CDS |
AAGCGGTAAGCTCTTTGGTT+TGG | 0.413393 | 7.1:-31794790 | None:intergenic |
GACAAACTCTTCAGAACCTT+TGG | 0.426895 | 7.1:-31794995 | None:intergenic |
CCAAACTTCTTCATATTCTA+GGG | 0.427155 | 7.1:+31794744 | MS.gene98670:CDS |
CACAGGGGAAAAGATGATAA+TGG | 0.427700 | 7.1:+31794561 | None:intergenic |
TTATGAGAAGCTGGAAACTT+TGG | 0.436869 | 7.1:+31795344 | MS.gene98670:CDS |
GGTTGGCGTACTCATTCCAT+AGG | 0.441891 | 7.1:+31795075 | MS.gene98670:CDS |
AAGAGCTTACCGCTTGAAGA+TGG | 0.452320 | 7.1:+31794798 | MS.gene98670:CDS |
CTAGTAGATCAAACTTCTAC+TGG | 0.455579 | 7.1:+31795547 | MS.gene98670:CDS |
TTGCTGGTGTGTGCAAGAAC+TGG | 0.471044 | 7.1:+31794662 | MS.gene98670:CDS |
TCTCATATCCCCACCTGCTC+GGG | 0.471064 | 7.1:-31795419 | None:intergenic |
AACCATGAATTATGAGAAGC+TGG | 0.471305 | 7.1:+31795335 | MS.gene98670:CDS |
ATCAATCTCGCGATTCTGGT+TGG | 0.493165 | 7.1:+31795058 | MS.gene98670:CDS |
CAGTAGAAGTTTGATCTACT+AGG | 0.493687 | 7.1:-31795546 | None:intergenic |
AACTTTCTCGTGCCTTAGGT+TGG | 0.499150 | 7.1:+31795236 | MS.gene98670:CDS |
GCCACTAGAAGACCCGGAAT+AGG | 0.505957 | 7.1:-31794839 | None:intergenic |
GTTGGCGTACTCATTCCATA+GGG | 0.510856 | 7.1:+31795076 | MS.gene98670:CDS |
TAGTGGCTATCTAATTATGG+TGG | 0.514391 | 7.1:+31794855 | MS.gene98670:CDS |
GTGCTTTGAGCAACCCGAGC+AGG | 0.526545 | 7.1:+31795406 | MS.gene98670:CDS |
ACAGGACTGTCAACTTCCTC+CGG | 0.530785 | 7.1:+31794588 | MS.gene98670:CDS |
TGTCCGCCTTGTCAGTGATA+AGG | 0.532182 | 7.1:-31795149 | None:intergenic |
CTTTGAGCAACCCGAGCAGG+TGG | 0.539328 | 7.1:+31795409 | MS.gene98670:CDS |
TCCTATTCCGGGTCTTCTAG+TGG | 0.544409 | 7.1:+31794838 | MS.gene98670:CDS |
AAAGATGATAATGGAAGCAC+AGG | 0.544801 | 7.1:+31794570 | None:intergenic |
TGATGAGGTAGATTATTCTC+TGG | 0.553091 | 7.1:+31795596 | MS.gene98670:CDS |
ACAAAGTCCACAACATTCCA+TGG | 0.554316 | 7.1:-31795105 | None:intergenic |
AGAATTGAACAATGCTCCCT+CGG | 0.555089 | 7.1:+31795212 | MS.gene98670:CDS |
ATAGATACCTCAGTGCTTCG+AGG | 0.555389 | 7.1:+31794931 | MS.gene98670:CDS |
AGAGCTTACCGCTTGAAGAT+GGG | 0.564669 | 7.1:+31794799 | MS.gene98670:CDS |
ATCACTGACAAGGCGGACAT+AGG | 0.567528 | 7.1:+31795153 | MS.gene98670:CDS |
TGCTCGGGTTGCTCAAAGCA+CGG | 0.571874 | 7.1:-31795404 | None:intergenic |
TTGTGATGAACAGCTTCTAG+TGG | 0.581224 | 7.1:+31795263 | MS.gene98670:CDS |
TTGAGCAACCCGAGCAGGTG+GGG | 0.592564 | 7.1:+31795411 | MS.gene98670:CDS |
AGTGGCTATCTAATTATGGT+GGG | 0.595975 | 7.1:+31794856 | MS.gene98670:CDS |
TCTACCTCATCATGTAAATG+TGG | 0.596221 | 7.1:-31795585 | None:intergenic |
GGGAAATCCATGGAATGTTG+TGG | 0.600355 | 7.1:+31795098 | MS.gene98670:CDS |
CATCACAACTAACCAACCTA+AGG | 0.603304 | 7.1:-31795248 | None:intergenic |
TAGATAGCCACTAGAAGACC+CGG | 0.615156 | 7.1:-31794845 | None:intergenic |
TTTGAGCAACCCGAGCAGGT+GGG | 0.626036 | 7.1:+31795410 | MS.gene98670:CDS |
AAAAGCTACCCATCTTCAAG+CGG | 0.647978 | 7.1:-31794807 | None:intergenic |
TGGCGTACTCATTCCATAGG+GGG | 0.653522 | 7.1:+31795078 | MS.gene98670:CDS |
GGAGTTTGAAGACTACCAGA+AGG | 0.677143 | 7.1:-31795525 | None:intergenic |
TATACACCTTATCACTGACA+AGG | 0.694872 | 7.1:+31795143 | MS.gene98670:CDS |
AGGCACGAGAAAGTTACCGA+GGG | 0.694924 | 7.1:-31795228 | None:intergenic |
TATCATCCACCGAATACACA+TGG | 0.701006 | 7.1:-31795479 | None:intergenic |
ATGATATCTAGCATTTCCGG+AGG | 0.701875 | 7.1:-31794604 | None:intergenic |
ACACCTTATCACTGACAAGG+CGG | 0.705237 | 7.1:+31795146 | MS.gene98670:CDS |
AAGGCACGAGAAAGTTACCG+AGG | 0.706343 | 7.1:-31795229 | None:intergenic |
CTGGTGTGTGCAAGAACTGG+AGG | 0.709297 | 7.1:+31794665 | MS.gene98670:CDS |
TTGGCGTACTCATTCCATAG+GGG | 0.712250 | 7.1:+31795077 | MS.gene98670:CDS |
AAATTTACCTCGAAGCACTG+AGG | 0.744997 | 7.1:-31794938 | None:intergenic |
AGAATGCCATGTGTATTCGG+TGG | 0.762277 | 7.1:+31795473 | MS.gene98670:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATTTACTGCATAAATTTTC+TGG | + | chr7.1:31794699-31794718 | MS.gene98670:CDS | 20.0% |
! | GAAGAAGTTTGGAAAATTAA+AGG | - | chr7.1:31794736-31794755 | None:intergenic | 25.0% |
ACCTTCTTTCTTCTTCTAAA+AGG | - | chr7.1:31794910-31794929 | None:intergenic | 30.0% | |
ATCATCGAAATCTAGATTCT+TGG | - | chr7.1:31794632-31794651 | None:intergenic | 30.0% | |
CCAAACTTCTTCATATTCTA+GGG | + | chr7.1:31794744-31794763 | MS.gene98670:CDS | 30.0% | |
GAAATGATATCTAGCATTTC+CGG | - | chr7.1:31794610-31794629 | None:intergenic | 30.0% | |
TCCAAACTTCTTCATATTCT+AGG | + | chr7.1:31794743-31794762 | MS.gene98670:CDS | 30.0% | |
TTCTAGTGGCTATCTAATTA+TGG | + | chr7.1:31794852-31794871 | MS.gene98670:CDS | 30.0% | |
! | CCTTCTTTCTTCTTCTAAAA+GGG | - | chr7.1:31794909-31794928 | None:intergenic | 30.0% |
! | TTTTCCACATTTACATGATG+AGG | + | chr7.1:31795581-31795600 | MS.gene98670:CDS | 30.0% |
!! | TTGGAAAATTAAAGGTGCTT+GGG | - | chr7.1:31794728-31794747 | None:intergenic | 30.0% |
!! | TTTGGAAAATTAAAGGTGCT+TGG | - | chr7.1:31794729-31794748 | None:intergenic | 30.0% |
AACCATGAATTATGAGAAGC+TGG | + | chr7.1:31795335-31795354 | MS.gene98670:CDS | 35.0% | |
AGTGGCTATCTAATTATGGT+GGG | + | chr7.1:31794856-31794875 | MS.gene98670:CDS | 35.0% | |
CAGTAGAAGTTTGATCTACT+AGG | - | chr7.1:31795549-31795568 | None:intergenic | 35.0% | |
CCCTAGAATATGAAGAAGTT+TGG | - | chr7.1:31794747-31794766 | None:intergenic | 35.0% | |
CTAGTAGATCAAACTTCTAC+TGG | + | chr7.1:31795547-31795566 | MS.gene98670:CDS | 35.0% | |
GATGATCTCTTTCAATTTGC+TGG | + | chr7.1:31794646-31794665 | MS.gene98670:CDS | 35.0% | |
GTACACATCCAATACTTTCT+CGG | - | chr7.1:31795301-31795320 | None:intergenic | 35.0% | |
TACACATCCAATACTTTCTC+GGG | - | chr7.1:31795300-31795319 | None:intergenic | 35.0% | |
TAGTGGCTATCTAATTATGG+TGG | + | chr7.1:31794855-31794874 | MS.gene98670:CDS | 35.0% | |
TATACACCTTATCACTGACA+AGG | + | chr7.1:31795143-31795162 | MS.gene98670:CDS | 35.0% | |
TATGAGAAGCTGGAAACTTT+GGG | + | chr7.1:31795345-31795364 | MS.gene98670:CDS | 35.0% | |
TCTACCTCATCATGTAAATG+TGG | - | chr7.1:31795588-31795607 | None:intergenic | 35.0% | |
TGATGAGGTAGATTATTCTC+TGG | + | chr7.1:31795596-31795615 | MS.gene98670:CDS | 35.0% | |
TTATGAGAAGCTGGAAACTT+TGG | + | chr7.1:31795344-31795363 | MS.gene98670:CDS | 35.0% | |
TTCCAGCTTCTCATAATTCA+TGG | - | chr7.1:31795340-31795359 | None:intergenic | 35.0% | |
! | CAAACTTCTACTGGTTAGAT+TGG | + | chr7.1:31795556-31795575 | MS.gene98670:CDS | 35.0% |
!! | CCCTTTTAGAAGAAGAAAGA+AGG | + | chr7.1:31794906-31794925 | MS.gene98670:CDS | 35.0% |
!! | TTTTGGGGATATTCCTATTC+CGG | + | chr7.1:31794826-31794845 | MS.gene98670:CDS | 35.0% |
!! | TTTTGTACCCGAGAAAGTAT+TGG | + | chr7.1:31795290-31795309 | MS.gene98670:CDS | 35.0% |
!!! | CGAGGTAAATTTTCTAGTTC+TGG | + | chr7.1:31794949-31794968 | MS.gene98670:CDS | 35.0% |
!!! | TCGCATTTTTTTATTCGTCG+TGG | + | chr7.1:31795373-31795392 | MS.gene98670:CDS | 35.0% |
AAAAGCTACCCATCTTCAAG+CGG | - | chr7.1:31794810-31794829 | None:intergenic | 40.0% | |
ACAAAGTCCACAACATTCCA+TGG | - | chr7.1:31795108-31795127 | None:intergenic | 40.0% | |
AGAATTGAACAATGCTCCCT+CGG | + | chr7.1:31795212-31795231 | MS.gene98670:CDS | 40.0% | |
ATGATATCTAGCATTTCCGG+AGG | - | chr7.1:31794607-31794626 | None:intergenic | 40.0% | |
ATGGAATGTTGTGGACTTTG+TGG | + | chr7.1:31795107-31795126 | MS.gene98670:CDS | 40.0% | |
CATCACAACTAACCAACCTA+AGG | - | chr7.1:31795251-31795270 | None:intergenic | 40.0% | |
GACAAACTCTTCAGAACCTT+TGG | - | chr7.1:31794998-31795017 | None:intergenic | 40.0% | |
TATCATCCACCGAATACACA+TGG | - | chr7.1:31795482-31795501 | None:intergenic | 40.0% | |
TGCAGAATGCCATGTGTATT+CGG | + | chr7.1:31795470-31795489 | MS.gene98670:CDS | 40.0% | |
TTGTGATGAACAGCTTCTAG+TGG | + | chr7.1:31795263-31795282 | MS.gene98670:CDS | 40.0% | |
TTTGGGGATATTCCTATTCC+GGG | + | chr7.1:31794827-31794846 | MS.gene98670:CDS | 40.0% | |
! | CTTGAAGATGGGTAGCTTTT+GGG | + | chr7.1:31794810-31794829 | MS.gene98670:CDS | 40.0% |
! | TTGAAGATGGGTAGCTTTTG+GGG | + | chr7.1:31794811-31794830 | MS.gene98670:CDS | 40.0% |
!! | AAATTTACCTCGAAGCACTG+AGG | - | chr7.1:31794941-31794960 | None:intergenic | 40.0% |
!! | GCTTTACTTGCTTTTGCCAA+AGG | + | chr7.1:31794979-31794998 | MS.gene98670:CDS | 40.0% |
AACTTTCTCGTGCCTTAGGT+TGG | + | chr7.1:31795236-31795255 | MS.gene98670:CDS | 45.0% | |
AAGAGCTTACCGCTTGAAGA+TGG | + | chr7.1:31794798-31794817 | MS.gene98670:CDS | 45.0% | |
AAGCGGTAAGCTCTTTGGTT+TGG | - | chr7.1:31794793-31794812 | None:intergenic | 45.0% | |
ACACCTTATCACTGACAAGG+CGG | + | chr7.1:31795146-31795165 | MS.gene98670:CDS | 45.0% | |
AGAATGCCATGTGTATTCGG+TGG | + | chr7.1:31795473-31795492 | MS.gene98670:CDS | 45.0% | |
AGAGCTTACCGCTTGAAGAT+GGG | + | chr7.1:31794799-31794818 | MS.gene98670:CDS | 45.0% | |
ATAGATACCTCAGTGCTTCG+AGG | + | chr7.1:31794931-31794950 | MS.gene98670:CDS | 45.0% | |
ATCAATCTCGCGATTCTGGT+TGG | + | chr7.1:31795058-31795077 | MS.gene98670:CDS | 45.0% | |
ATTCCATAGGGGGAAATCCA+TGG | + | chr7.1:31795088-31795107 | MS.gene98670:CDS | 45.0% | |
ATTCCATGGATTTCCCCCTA+TGG | - | chr7.1:31795094-31795113 | None:intergenic | 45.0% | |
CGAAAACACATTGTGCCTTC+TGG | + | chr7.1:31795510-31795529 | MS.gene98670:CDS | 45.0% | |
GGAGTTTGAAGACTACCAGA+AGG | - | chr7.1:31795528-31795547 | None:intergenic | 45.0% | |
GGGAAATCCATGGAATGTTG+TGG | + | chr7.1:31795098-31795117 | MS.gene98670:CDS | 45.0% | |
GTCTATCAATCTCGCGATTC+TGG | + | chr7.1:31795054-31795073 | MS.gene98670:CDS | 45.0% | |
GTTGGCGTACTCATTCCATA+GGG | + | chr7.1:31795076-31795095 | MS.gene98670:CDS | 45.0% | |
TAGATAGCCACTAGAAGACC+CGG | - | chr7.1:31794848-31794867 | None:intergenic | 45.0% | |
TCTTCAAGCGGTAAGCTCTT+TGG | - | chr7.1:31794798-31794817 | None:intergenic | 45.0% | |
TTGGCGTACTCATTCCATAG+GGG | + | chr7.1:31795077-31795096 | MS.gene98670:CDS | 45.0% | |
! | GCTTGAAGATGGGTAGCTTT+TGG | + | chr7.1:31794809-31794828 | MS.gene98670:CDS | 45.0% |
AAGGCACGAGAAAGTTACCG+AGG | - | chr7.1:31795232-31795251 | None:intergenic | 50.0% | |
ACAGGACTGTCAACTTCCTC+CGG | + | chr7.1:31794588-31794607 | MS.gene98670:CDS | 50.0% | |
AGGCACGAGAAAGTTACCGA+GGG | - | chr7.1:31795231-31795250 | None:intergenic | 50.0% | |
ATCACTGACAAGGCGGACAT+AGG | + | chr7.1:31795153-31795172 | MS.gene98670:CDS | 50.0% | |
CGGTAACTTTCTCGTGCCTT+AGG | + | chr7.1:31795232-31795251 | MS.gene98670:CDS | 50.0% | |
GGTTGGCGTACTCATTCCAT+AGG | + | chr7.1:31795075-31795094 | MS.gene98670:CDS | 50.0% | |
TCCTATTCCGGGTCTTCTAG+TGG | + | chr7.1:31794838-31794857 | MS.gene98670:CDS | 50.0% | |
TGGCGTACTCATTCCATAGG+GGG | + | chr7.1:31795078-31795097 | MS.gene98670:CDS | 50.0% | |
TGTCCGCCTTGTCAGTGATA+AGG | - | chr7.1:31795152-31795171 | None:intergenic | 50.0% | |
TTGCTGGTGTGTGCAAGAAC+TGG | + | chr7.1:31794662-31794681 | MS.gene98670:CDS | 50.0% | |
CTCTCATATCCCCACCTGCT+CGG | - | chr7.1:31795423-31795442 | None:intergenic | 55.0% | |
CTGGTGTGTGCAAGAACTGG+AGG | + | chr7.1:31794665-31794684 | MS.gene98670:CDS | 55.0% | |
GCCACTAGAAGACCCGGAAT+AGG | - | chr7.1:31794842-31794861 | None:intergenic | 55.0% | |
TCTCATATCCCCACCTGCTC+GGG | - | chr7.1:31795422-31795441 | None:intergenic | 55.0% | |
TTTGAGCAACCCGAGCAGGT+GGG | + | chr7.1:31795410-31795429 | MS.gene98670:CDS | 55.0% | |
! | TGCTCGGGTTGCTCAAAGCA+CGG | - | chr7.1:31795407-31795426 | None:intergenic | 55.0% |
CTTTGAGCAACCCGAGCAGG+TGG | + | chr7.1:31795409-31795428 | MS.gene98670:CDS | 60.0% | |
TTGAGCAACCCGAGCAGGTG+GGG | + | chr7.1:31795411-31795430 | MS.gene98670:CDS | 60.0% | |
! | GTGCTTTGAGCAACCCGAGC+AGG | + | chr7.1:31795406-31795425 | MS.gene98670:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.1 | gene | 31794574 | 31795626 | 31794574 | ID=MS.gene98670 |
chr7.1 | mRNA | 31794574 | 31795626 | 31794574 | ID=MS.gene98670.t1;Parent=MS.gene98670 |
chr7.1 | exon | 31794574 | 31795626 | 31794574 | ID=MS.gene98670.t1.exon1;Parent=MS.gene98670.t1 |
chr7.1 | CDS | 31794574 | 31795626 | 31794574 | ID=cds.MS.gene98670.t1;Parent=MS.gene98670.t1 |
Gene Sequence |
Protein sequence |