AlfalfaGEDB | MS.gene75067

M. sativa cultivar XinJiangDaYe / MS.gene75067

KEGG: -
GO: GO:0003674 GO:0005488 GO:0005515 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:1903506 GO:2000112 GO:2001141
PFAM: PF00646.36

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene75067.t1	XP_003620884.1	64.4	455	21	3	1	314	1	455	7.40E-155	556.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene75067.t1	G7KJ84	64.4	455	21	3	1	314	1	455	5.3e-155	556.6

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049142	MS.gene75067	0.820787	5.70E-53	-1.69E-46
MS.gene04918	MS.gene75067	0.817908	2.58E-52	-1.69E-46
MS.gene04920	MS.gene75067	0.814348	1.61E-51	-1.69E-46
MS.gene049254	MS.gene75067	0.855932	4.52E-62	-1.69E-46
MS.gene049283	MS.gene75067	0.816198	6.26E-52	-1.69E-46
MS.gene049350	MS.gene75067	0.803197	3.91E-49	-1.69E-46
MS.gene049368	MS.gene75067	0.804099	2.54E-49	-1.69E-46
MS.gene049419	MS.gene75067	-0.800988	1.11E-48	-1.69E-46
MS.gene049452	MS.gene75067	0.800091	1.70E-48	-1.69E-46
MS.gene049499	MS.gene75067	0.830624	2.65E-55	-1.69E-46
MS.gene049711	MS.gene75067	0.801638	8.19E-49	-1.69E-46
MS.gene049821	MS.gene75067	0.801199	1.01E-48	-1.69E-46
MS.gene049983	MS.gene75067	0.840945	6.40E-58	-1.69E-46
MS.gene050414	MS.gene75067	0.804154	2.47E-49	-1.69E-46
MS.gene050559	MS.gene75067	0.808907	2.46E-50	-1.69E-46
MS.gene050561	MS.gene75067	0.803594	3.24E-49	-1.69E-46
MS.gene050654	MS.gene75067	0.817232	3.67E-52	-1.69E-46
MS.gene050759	MS.gene75067	0.803686	3.10E-49	-1.69E-46
MS.gene051198	MS.gene75067	0.817278	3.58E-52	-1.69E-46
MS.gene051247	MS.gene75067	0.813819	2.11E-51	-1.69E-46
MS.gene051279	MS.gene75067	0.835513	1.61E-56	-1.69E-46
MS.gene051332	MS.gene75067	0.818222	2.19E-52	-1.69E-46
MS.gene051594	MS.gene75067	0.830004	3.75E-55	-1.69E-46
MS.gene051744	MS.gene75067	0.820124	8.10E-53	-1.69E-46
MS.gene052016	MS.gene75067	0.819013	1.45E-52	-1.69E-46
MS.gene052037	MS.gene75067	0.832618	8.53E-56	-1.69E-46
MS.gene052239	MS.gene75067	-0.812998	3.20E-51	-1.69E-46
MS.gene052447	MS.gene75067	0.815681	8.16E-52	-1.69E-46
MS.gene052463	MS.gene75067	0.847708	9.75E-60	-1.69E-46
MS.gene052493	MS.gene75067	0.800761	1.24E-48	-1.69E-46
MS.gene052516	MS.gene75067	0.819651	1.04E-52	-1.69E-46
MS.gene052518	MS.gene75067	0.807857	4.12E-50	-1.69E-46
MS.gene052519	MS.gene75067	0.813451	2.54E-51	-1.69E-46
MS.gene052534	MS.gene75067	0.841522	4.51E-58	-1.69E-46
MS.gene052582	MS.gene75067	0.822082	2.87E-53	-1.69E-46
MS.gene052584	MS.gene75067	0.825717	4.03E-54	-1.69E-46
MS.gene052773	MS.gene75067	0.803487	3.41E-49	-1.69E-46
MS.gene052855	MS.gene75067	0.801325	9.50E-49	-1.69E-46
MS.gene053006	MS.gene75067	0.808361	3.22E-50	-1.69E-46
MS.gene053226	MS.gene75067	0.833204	6.10E-56	-1.69E-46
MS.gene053272	MS.gene75067	-0.81468	1.36E-51	-1.69E-46
MS.gene05350	MS.gene75067	0.800114	1.68E-48	-1.69E-46
MS.gene05415	MS.gene75067	0.810878	9.26E-51	-1.69E-46
MS.gene05423	MS.gene75067	0.829233	5.77E-55	-1.69E-46
MS.gene054291	MS.gene75067	-0.804946	1.69E-49	-1.69E-46
MS.gene054479	MS.gene75067	0.823521	1.32E-53	-1.69E-46
MS.gene054651	MS.gene75067	0.822601	2.17E-53	-1.69E-46
MS.gene054892	MS.gene75067	0.811504	6.77E-51	-1.69E-46
MS.gene054893	MS.gene75067	0.808925	2.44E-50	-1.69E-46
MS.gene054991	MS.gene75067	0.834333	3.18E-56	-1.69E-46
MS.gene055228	MS.gene75067	0.816894	4.37E-52	-1.69E-46
MS.gene055513	MS.gene75067	0.823463	1.37E-53	-1.69E-46
MS.gene055724	MS.gene75067	0.824878	6.36E-54	-1.69E-46
MS.gene055778	MS.gene75067	0.803941	2.74E-49	-1.69E-46
MS.gene055818	MS.gene75067	0.826732	2.31E-54	-1.69E-46
MS.gene055841	MS.gene75067	0.824434	8.09E-54	-1.69E-46
MS.gene055926	MS.gene75067	0.801827	7.49E-49	-1.69E-46
MS.gene056050	MS.gene75067	0.805164	1.52E-49	-1.69E-46
MS.gene056162	MS.gene75067	0.810849	9.39E-51	-1.69E-46
MS.gene056174	MS.gene75067	0.879624	1.07E-69	-1.69E-46
MS.gene056308	MS.gene75067	0.834422	3.02E-56	-1.69E-46
MS.gene056595	MS.gene75067	0.818603	1.80E-52	-1.69E-46
MS.gene056699	MS.gene75067	0.826472	2.66E-54	-1.69E-46
MS.gene056776	MS.gene75067	0.849916	2.38E-60	-1.69E-46
MS.gene056779	MS.gene75067	0.811748	5.99E-51	-1.69E-46
MS.gene05686	MS.gene75067	0.83428	3.28E-56	-1.69E-46
MS.gene05690	MS.gene75067	0.823943	1.05E-53	-1.69E-46
MS.gene057034	MS.gene75067	0.803433	3.50E-49	-1.69E-46
MS.gene057102	MS.gene75067	0.836323	1.00E-56	-1.69E-46
MS.gene057208	MS.gene75067	0.839795	1.28E-57	-1.69E-46
MS.gene057371	MS.gene75067	0.806633	7.48E-50	-1.69E-46
MS.gene057598	MS.gene75067	0.818242	2.17E-52	-1.69E-46
MS.gene057855	MS.gene75067	0.803009	4.28E-49	-1.69E-46
MS.gene058009	MS.gene75067	0.801428	9.04E-49	-1.69E-46
MS.gene058010	MS.gene75067	0.815366	9.59E-52	-1.69E-46
MS.gene058279	MS.gene75067	0.806431	8.26E-50	-1.69E-46
MS.gene058355	MS.gene75067	0.817442	3.29E-52	-1.69E-46
MS.gene058625	MS.gene75067	0.805196	1.50E-49	-1.69E-46
MS.gene058783	MS.gene75067	0.812984	3.22E-51	-1.69E-46
MS.gene058979	MS.gene75067	0.802998	4.30E-49	-1.69E-46
MS.gene05897	MS.gene75067	0.826342	2.86E-54	-1.69E-46
MS.gene059439	MS.gene75067	0.827447	1.56E-54	-1.69E-46
MS.gene059625	MS.gene75067	0.803036	4.22E-49	-1.69E-46
MS.gene05985	MS.gene75067	-0.833806	4.32E-56	-1.69E-46
MS.gene059965	MS.gene75067	0.801432	9.03E-49	-1.69E-46
MS.gene060259	MS.gene75067	0.818344	2.06E-52	-1.69E-46
MS.gene060365	MS.gene75067	0.834237	3.37E-56	-1.69E-46
MS.gene060521	MS.gene75067	0.817886	2.61E-52	-1.69E-46
MS.gene060777	MS.gene75067	0.81217	4.85E-51	-1.69E-46
MS.gene060932	MS.gene75067	0.834566	2.78E-56	-1.69E-46
MS.gene060935	MS.gene75067	0.811222	7.80E-51	-1.69E-46
MS.gene060937	MS.gene75067	0.808736	2.68E-50	-1.69E-46
MS.gene061100	MS.gene75067	0.835828	1.34E-56	-1.69E-46
MS.gene061160	MS.gene75067	0.807879	4.07E-50	-1.69E-46
MS.gene061188	MS.gene75067	0.80682	6.83E-50	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene75067	MS.gene42893	PPI
MS.gene75067	MS.gene056881	PPI
MS.gene75067	MS.gene67877	PPI
MS.gene75067	MS.gene071039	PPI
MS.gene75067	MS.gene43440	PPI
MS.gene75067	MS.gene071037	PPI
MS.gene75067	MS.gene024275	PPI
MS.gene75067	MS.gene33922	PPI
MS.gene75067	MS.gene42891	PPI
MS.gene050308	MS.gene75067	PPI
MS.gene071039	MS.gene75067	PPI
MS.gene52540	MS.gene75067	PPI
MS.gene75067	MS.gene98671	PPI
MS.gene03004	MS.gene75067	PPI
MS.gene75067	MS.gene050307	PPI
MS.gene75067	MS.gene007208	PPI
MS.gene75067	MS.gene051762	PPI
MS.gene75067	MS.gene81751	PPI
MS.gene75067	MS.gene064044	PPI
MS.gene75067	MS.gene050306	PPI
MS.gene75067	MS.gene42889	PPI
MS.gene75067	MS.gene009311	PPI
MS.gene75067	MS.gene005636	PPI
MS.gene75067	MS.gene52540	PPI
MS.gene75067	MS.gene034859	PPI
MS.gene75067	MS.gene024343	PPI
MS.gene75067	MS.gene75065	PPI
MS.gene75067	MS.gene59977	PPI
MS.gene75067	MS.gene007207	PPI
MS.gene75067	MS.gene05311	PPI
MS.gene75067	MS.gene98673	PPI
MS.gene75067	MS.gene24686	PPI
MS.gene95088	MS.gene75067	PPI
MS.gene98670	MS.gene75067	PPI
MS.gene75067	MS.gene007206	PPI
MS.gene75067	MS.gene53925	PPI
MS.gene75067	MS.gene024341	PPI
MS.gene75067	MS.gene24685	PPI
MS.gene75067	MS.gene47120	PPI
MS.gene75067	MS.gene42887	PPI
MS.gene75067	MS.gene012753	PPI
MS.gene007204	MS.gene75067	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene75067.t1	MTR_6g092140	87.940	199	19	2	1	194	1	199	3.34e-122	358
MS.gene75067.t1	MTR_6g092140	92.248	129	8	1	186	314	329	455	6.93e-81	253
MS.gene75067.t1	MTR_6g091830	87.940	199	19	2	1	194	1	199	5.57e-122	357
MS.gene75067.t1	MTR_6g091830	93.798	129	6	1	186	314	329	455	1.67e-82	256
MS.gene75067.t1	MTR_6g088340	63.636	209	29	4	1	194	1	177	6.29e-77	241
MS.gene75067.t1	MTR_6g088340	74.522	157	35	2	158	314	282	433	9.03e-74	233
MS.gene75067.t1	MTR_6g091850	89.109	101	11	0	214	314	1	101	1.56e-64	199
MS.gene75067.t1	MTR_6g011110	56.429	140	58	2	177	314	139	277	2.94e-48	163
MS.gene75067.t1	MTR_3g085910	60.938	128	38	3	96	212	2	128	8.50e-45	154
MS.gene75067.t1	MTR_3g085910	66.250	80	27	0	193	272	197	276	9.15e-30	114
MS.gene75067.t1	MTR_3g006140	53.333	150	58	3	86	223	15	164	2.67e-44	155
MS.gene75067.t1	MTR_3g006140	43.802	121	62	1	193	313	259	373	7.38e-26	105
MS.gene75067.t1	MTR_3g068220	60.000	125	40	2	193	312	236	355	1.23e-43	153
MS.gene75067.t1	MTR_3g068220	76.238	101	23	1	95	194	2	102	3.06e-42	149
MS.gene75067.t1	MTR_3g006010	40.092	217	94	6	6	193	9	218	3.36e-41	149
MS.gene75067.t1	MTR_3g006010	43.697	119	61	2	193	311	354	466	1.56e-25	106
MS.gene75067.t1	MTR_3g086480	56.522	115	41	2	193	306	147	253	3.31e-38	136
MS.gene75067.t1	MTR_3g006100	49.640	139	58	3	97	223	4	142	8.51e-38	137
MS.gene75067.t1	MTR_3g006100	45.082	122	61	2	193	314	237	352	9.54e-27	108
MS.gene75067.t1	MTR_3g006120	59.596	99	39	1	97	194	4	102	1.12e-36	134
MS.gene75067.t1	MTR_3g006120	45.378	119	59	2	193	311	237	349	1.32e-25	105
MS.gene75067.t1	MTR_1g089085	50.435	115	51	3	82	194	24	134	2.56e-33	121
MS.gene75067.t1	MTR_7g083950	43.353	173	77	5	23	194	32	184	4.53e-33	126
MS.gene75067.t1	MTR_7g083950	47.200	125	54	3	193	314	317	432	3.25e-27	110
MS.gene75067.t1	MTR_1g106050	59.406	101	40	1	97	196	2	102	8.10e-33	118
MS.gene75067.t1	MTR_3g045700	52.000	125	48	3	193	314	235	350	4.46e-32	122
MS.gene75067.t1	MTR_3g045700	53.465	101	46	1	95	194	2	102	2.30e-26	107
MS.gene75067.t1	MTR_4g133320	52.212	113	46	1	202	314	204	308	4.57e-32	121
MS.gene75067.t1	MTR_4g133490	51.327	113	47	1	202	314	244	348	2.54e-31	120
MS.gene75067.t1	MTR_4g133490	53.030	132	50	3	97	216	2	133	5.48e-31	119
MS.gene75067.t1	MTR_3g006180	60.674	89	34	1	107	194	1	89	7.06e-31	119
MS.gene75067.t1	MTR_3g006180	43.802	121	62	2	193	313	224	338	3.22e-25	103
MS.gene75067.t1	MTR_1g109520	53.153	111	46	3	205	313	70	176	6.63e-29	109
MS.gene75067.t1	MTR_1g109340	51.786	112	42	3	205	313	252	354	3.13e-27	109
MS.gene75067.t1	MTR_1g109340	37.600	125	47	3	7	131	12	105	1.74e-15	76.6
MS.gene75067.t1	MTR_1g089620	41.975	162	74	5	96	252	2	148	4.76e-26	105
MS.gene75067.t1	MTR_1g100280	45.600	125	58	3	193	314	220	337	7.51e-26	105
MS.gene75067.t1	MTR_1g100280	50.962	104	48	1	92	192	8	111	3.82e-23	97.8
MS.gene75067.t1	MTR_1g109090	42.975	121	60	3	91	202	10	130	1.19e-22	92.4
MS.gene75067.t1	MTR_7g070100	53.247	77	35	1	99	174	6	82	1.93e-21	93.6
MS.gene75067.t1	MTR_7g070100	42.623	122	64	3	193	314	235	350	3.89e-21	92.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 56 sgRNAs with CRISPR-Local

Find 132 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGGGCGTAATCGTTTAATTT+TGG	0.114594	6.3:+83846946	MS.gene75067:CDS
TTTGATGACCTCTTTCAATT+TGG	0.281571	6.3:+83847796	MS.gene75067:CDS
TTATGTCAAGTTGGAATCTT+TGG	0.283864	6.3:+83848500	MS.gene75067:CDS
AAACCAGGAATAATGAATTC+TGG	0.300415	6.3:-83848669	None:intergenic
ATGCCAGAATTCATTATTCC+TGG	0.335290	6.3:+83848666	MS.gene75067:CDS
AGGATGAATAAGGTACTTAA+AGG	0.337066	6.3:+83846926	MS.gene75067:CDS
ATGGCAAACGAACATGGAAT+TGG	0.345392	6.3:+83846767	MS.gene75067:CDS
TTTCAAAGAAAGGATGAATA+AGG	0.348934	6.3:+83846916	MS.gene75067:CDS
TGACCACCTCGTTGTCGAAT+TGG	0.360565	6.3:-83847007	None:intergenic
AATTTATTGGAAGAATTTCA+TGG	0.367262	6.3:+83847852	MS.gene75067:CDS
TACTTCCGATTTGCCTATCA+TGG	0.378106	6.3:+83847979	MS.gene75067:CDS
ATTTCTTAAAAGCGCACCTT+TGG	0.386604	6.3:-83847897	None:intergenic
ATGTTCCATGTGGCAAATAC+AGG	0.390944	6.3:+83848619	MS.gene75067:CDS
GGCAAATACAGGGTGTATAA+AGG	0.407440	6.3:+83848630	MS.gene75067:CDS
CAGTTCAAAATTTCAAAGAA+AGG	0.407992	6.3:+83846906	MS.gene75067:CDS
AAGAGAACTGTCAACTTCCT+TGG	0.409046	6.3:+83847740	MS.gene75067:CDS
TATGTCAAGTTGGAATCTTT+GGG	0.417393	6.3:+83848501	MS.gene75067:CDS
CAAAACAACGTTACATAGAT+TGG	0.418259	6.3:+83848730	MS.gene75067:CDS
TTGGACAAGTAATGGTTCTT+CGG	0.433887	6.3:-83847878	None:intergenic
CGAACATGGAATTGGGTTTG+TGG	0.442412	6.3:+83846775	MS.gene75067:CDS
AGAGAACTGTCAACTTCCTT+GGG	0.449563	6.3:+83847741	MS.gene75067:CDS
AATCTGTGTTTCAAGGTAAG+AGG	0.459600	6.3:+83846807	MS.gene75067:CDS
TGGCAAACGAACATGGAATT+GGG	0.471607	6.3:+83846768	MS.gene75067:CDS
CACTGAGCAACCCGCACATG+TGG	0.491738	6.3:+83848565	MS.gene75067:CDS
GGATGAATAAGGTACTTAAA+GGG	0.501407	6.3:+83846927	MS.gene75067:CDS
AATTCCATGTTCGTTTGCCA+TGG	0.506447	6.3:-83846765	None:intergenic
GCGCACCTTTGGACAAGTAA+TGG	0.508656	6.3:-83847886	None:intergenic
GCCTATCATGGGTCTTCTAG+TGG	0.510972	6.3:+83847991	MS.gene75067:CDS
AAGACCCATGATAGGCAAAT+CGG	0.519986	6.3:-83847984	None:intergenic
ATCTGTGTTTCAAGGTAAGA+GGG	0.522269	6.3:+83846808	MS.gene75067:CDS
TCCACTAGAAGACCCATGAT+AGG	0.522961	6.3:-83847992	None:intergenic
TCTCATAACCCCACATGTGC+GGG	0.524492	6.3:-83848575	None:intergenic
TACCATGGATTATGTCAAGT+TGG	0.524896	6.3:+83848491	MS.gene75067:CDS
GCCTCCATGGCAAACGAACA+TGG	0.527907	6.3:+83846761	None:intergenic
GAGCGGCAATAAATAGGATG+TGG	0.532946	6.3:-83848708	None:intergenic
GAAGTAAAATCTGTGTTTCA+AGG	0.545805	6.3:+83846800	MS.gene75067:CDS
TTCTCATAACCCCACATGTG+CGG	0.553716	6.3:-83848576	None:intergenic
CAACGAGGTGGTCATAGTAA+TGG	0.556109	6.3:+83847016	MS.gene75067:CDS
TACACCCTGTATTTGCCACA+TGG	0.574023	6.3:-83848624	None:intergenic
ACTTCCGATTTGCCTATCAT+GGG	0.586293	6.3:+83847980	MS.gene75067:CDS
GAGTGATAAACTTTATCGTG+AGG	0.586533	6.3:-83847940	None:intergenic
ATACACTGCCAAATTGAAAG+AGG	0.596861	6.3:-83847804	None:intergenic
TTCCAACTTGACATAATCCA+TGG	0.602044	6.3:-83848493	None:intergenic
TGTTCCATGTGGCAAATACA+GGG	0.612242	6.3:+83848620	MS.gene75067:CDS
ACTGAGCAACCCGCACATGT+GGG	0.619433	6.3:+83848566	MS.gene75067:CDS
CTGAGCAACCCGCACATGTG+GGG	0.626393	6.3:+83848567	MS.gene75067:CDS
ACATGGAATTGGGTTTGTGG+AGG	0.628720	6.3:+83846778	MS.gene75067:CDS
CAAGATAGACTTCTCTACCA+TGG	0.632047	6.3:+83848476	MS.gene75067:CDS
AAGAACCATTACTTGTCCAA+AGG	0.641369	6.3:+83847881	MS.gene75067:CDS
AATACGACGATGCTTCATGT+AGG	0.643363	6.3:-83846978	None:intergenic
TTTGCCACATGGAACATCGA+TGG	0.643688	6.3:-83848613	None:intergenic
AGTTCACTAAGTTTAAAACC+AGG	0.645687	6.3:-83848684	None:intergenic
ATGATGTCAAGCAAATCCCA+AGG	0.658074	6.3:-83847757	None:intergenic
TATGCCATCGATGTTCCATG+TGG	0.717545	6.3:+83848609	MS.gene75067:CDS
CTTCCAATTCGACAACGAGG+TGG	0.719023	6.3:+83847004	MS.gene75067:CDS
ACACTTCCAATTCGACAACG+AGG	0.767405	6.3:+83847001	MS.gene75067:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	GAGAATTTTATAAAATTTAT+TGG	+	chr6.3:83847839-83847858	MS.gene75067:CDS	10.0%
!!	AAAAAATAGTAAAAACAAGA+AGG	-	chr6.3:83847547-83847566	None:intergenic	15.0%
!!!	ACTATTTTTTTCGAAAAAAT+GGG	+	chr6.3:83847557-83847576	MS.gene75067:intron	15.0%
!!!	TACTATTTTTTTCGAAAAAA+TGG	+	chr6.3:83847556-83847575	MS.gene75067:intron	15.0%
!!	AATTTATTGGAAGAATTTCA+TGG	+	chr6.3:83847852-83847871	MS.gene75067:CDS	20.0%
!!!	AATCTGATATATGTATGTTT+TGG	+	chr6.3:83847130-83847149	MS.gene75067:intron	20.0%
!!!	ATCTGATATATGTATGTTTT+GGG	+	chr6.3:83847131-83847150	MS.gene75067:intron	20.0%
!	AACATTAAAACGGCAAATAA+TGG	-	chr6.3:83847410-83847429	None:intergenic	25.0%
!	CAGTTCAAAATTTCAAAGAA+AGG	+	chr6.3:83846906-83846925	MS.gene75067:CDS	25.0%
!	TATATTATTCCTTTGTAGCT+AGG	+	chr6.3:83847312-83847331	MS.gene75067:intron	25.0%
!	TTTCAAAGAAAGGATGAATA+AGG	+	chr6.3:83846916-83846935	MS.gene75067:CDS	25.0%
!!	AGTGCTTAATTTTATGTCAA+AGG	+	chr6.3:83848437-83848456	MS.gene75067:intron	25.0%
!!	ATGAAGTTCTAGCATAATTA+AGG	-	chr6.3:83847471-83847490	None:intergenic	25.0%
!!	ATTCGTCTGATATATGTTTT+GGG	+	chr6.3:83847282-83847301	MS.gene75067:intron	25.0%
!!	CTCCTTTTCTATGATATTAT+GGG	+	chr6.3:83847602-83847621	MS.gene75067:intron	25.0%
!!	GTGTAACTTCTAGTTATTAT+TGG	+	chr6.3:83848376-83848395	MS.gene75067:intron	25.0%
!!	TATTCGTCTGATATATGTTT+TGG	+	chr6.3:83847281-83847300	MS.gene75067:intron	25.0%
!!	TCTGATATATGTATGTTTTG+GGG	+	chr6.3:83847132-83847151	MS.gene75067:intron	25.0%
!!	TTTTAGACATCTACAATATG+AGG	+	chr6.3:83848755-83848774	MS.gene75067:CDS	25.0%
!!	TTTTCCTCTCAACATTAAAA+CGG	-	chr6.3:83847420-83847439	None:intergenic	25.0%
!!!	CTTTCTTTGAAATTTTGAAC+TGG	-	chr6.3:83846908-83846927	None:intergenic	25.0%
	AAACCAGGAATAATGAATTC+TGG	-	chr6.3:83848672-83848691	None:intergenic	30.0%
	AGCATCTTTCTTCTTGTAAA+TGG	-	chr6.3:83848063-83848082	None:intergenic	30.0%
	AGTTATTATTGGTCACACAT+AGG	+	chr6.3:83848387-83848406	MS.gene75067:intron	30.0%
	ATCAATCTCGAAATCTTTGT+TGG	+	chr6.3:83848211-83848230	MS.gene75067:intron	30.0%
	CAAAACAACGTTACATAGAT+TGG	+	chr6.3:83848730-83848749	MS.gene75067:CDS	30.0%
	CAAAGGACAAAAAAAGAAGA+AGG	+	chr6.3:83847714-83847733	MS.gene75067:intron	30.0%
	CCATAATATCATAGAAAAGG+AGG	-	chr6.3:83847604-83847623	None:intergenic	30.0%
	GAAGTAAAATCTGTGTTTCA+AGG	+	chr6.3:83846800-83846819	MS.gene75067:CDS	30.0%
	GTCCCATAATATCATAGAAA+AGG	-	chr6.3:83847607-83847626	None:intergenic	30.0%
	GTTATTATTGGTCACACATA+GGG	+	chr6.3:83848388-83848407	MS.gene75067:intron	30.0%
	TAAAAACAAGAAGGTAGAAG+AGG	-	chr6.3:83847538-83847557	None:intergenic	30.0%
	TAATAACTAGAAGTTACACC+AGG	-	chr6.3:83848375-83848394	None:intergenic	30.0%
	TTAGAATTGAAGAGTAATCC+TGG	+	chr6.3:83848354-83848373	MS.gene75067:intron	30.0%
!	AGGATGAATAAGGTACTTAA+AGG	+	chr6.3:83846926-83846945	MS.gene75067:CDS	30.0%
!	AGTTCACTAAGTTTAAAACC+AGG	-	chr6.3:83848687-83848706	None:intergenic	30.0%
!	ATTTGCTTGACATCATTTTG+AGG	+	chr6.3:83847764-83847783	MS.gene75067:CDS	30.0%
!	CCTCCTTTTCTATGATATTA+TGG	+	chr6.3:83847601-83847620	MS.gene75067:intron	30.0%
!	GGATGAATAAGGTACTTAAA+GGG	+	chr6.3:83846927-83846946	MS.gene75067:CDS	30.0%
!	TTTGATGACCTCTTTCAATT+TGG	+	chr6.3:83847796-83847815	MS.gene75067:CDS	30.0%
!!	CTGATATATGTATGTTTTGG+GGG	+	chr6.3:83847133-83847152	MS.gene75067:intron	30.0%
!!	TATGTCAAGTTGGAATCTTT+GGG	+	chr6.3:83848501-83848520	MS.gene75067:CDS	30.0%
!!	TTATGTCAAGTTGGAATCTT+TGG	+	chr6.3:83848500-83848519	MS.gene75067:CDS	30.0%
	AAATTGTACTCAACTCTCCT+TGG	-	chr6.3:83847224-83847243	None:intergenic	35.0%
	AAGAACCATTACTTGTCCAA+AGG	+	chr6.3:83847881-83847900	MS.gene75067:CDS	35.0%
	AATCTGTGTTTCAAGGTAAG+AGG	+	chr6.3:83846807-83846826	MS.gene75067:CDS	35.0%
	ACACCATGACAGTTATTTGT+TGG	-	chr6.3:83847249-83847268	None:intergenic	35.0%
	ATACACTGCCAAATTGAAAG+AGG	-	chr6.3:83847807-83847826	None:intergenic	35.0%
	ATCTGTGTTTCAAGGTAAGA+GGG	+	chr6.3:83846808-83846827	MS.gene75067:CDS	35.0%
	ATGCCAGAATTCATTATTCC+TGG	+	chr6.3:83848666-83848685	MS.gene75067:CDS	35.0%
	CATATATGTTGTCACTGACA+AGG	+	chr6.3:83848287-83848306	MS.gene75067:intron	35.0%
	GAGTGATAAACTTTATCGTG+AGG	-	chr6.3:83847943-83847962	None:intergenic	35.0%
	TCACAAAAAACGACGATGTT+AGG	-	chr6.3:83847692-83847711	None:intergenic	35.0%
	TCTCCAACAAATAACTGTCA+TGG	+	chr6.3:83847243-83847262	MS.gene75067:intron	35.0%
	TTCCAACTTGACATAATCCA+TGG	-	chr6.3:83848496-83848515	None:intergenic	35.0%
	TTGGACAAGTAATGGTTCTT+CGG	-	chr6.3:83847881-83847900	None:intergenic	35.0%
	TTGGCAGTGTATGCAAAAAT+TGG	+	chr6.3:83847815-83847834	MS.gene75067:CDS	35.0%
!	ATTTCTTAAAAGCGCACCTT+TGG	-	chr6.3:83847900-83847919	None:intergenic	35.0%
!	CTCAGTGCATAATACCTTTT+CGG	-	chr6.3:83848552-83848571	None:intergenic	35.0%
!	GAAATTTTGAACTGGAAGTC+TGG	-	chr6.3:83846900-83846919	None:intergenic	35.0%
!	TACCATGGATTATGTCAAGT+TGG	+	chr6.3:83848491-83848510	MS.gene75067:CDS	35.0%
!!	AGGGCGTAATCGTTTAATTT+TGG	+	chr6.3:83846946-83846965	MS.gene75067:CDS	35.0%
!!	GGGCGTAATCGTTTAATTTT+GGG	+	chr6.3:83846947-83846966	MS.gene75067:CDS	35.0%
!!	TGTTTTGAGCGGCAATAAAT+AGG	-	chr6.3:83848717-83848736	None:intergenic	35.0%
!!!	CGTCGTTTTTTGTGATACAA+AGG	+	chr6.3:83847697-83847716	MS.gene75067:intron	35.0%
!!!	CTATGTAACGTTGTTTTGAG+CGG	-	chr6.3:83848728-83848747	None:intergenic	35.0%
!!!	GTCTGATATATGTTTTGGGA+AGG	+	chr6.3:83847286-83847305	MS.gene75067:intron	35.0%
!!!	TGTCATTTTAGCATACACCA+AGG	+	chr6.3:83847204-83847223	MS.gene75067:intron	35.0%
!!!	TTTGCCGTTTTAATGTTGAG+AGG	+	chr6.3:83847413-83847432	MS.gene75067:intron	35.0%
	AAAAGCAAGCAAGACTTTGC+AGG	-	chr6.3:83848127-83848146	None:intergenic	40.0%
	AAGACCCATGATAGGCAAAT+CGG	-	chr6.3:83847987-83848006	None:intergenic	40.0%
	AAGAGAACTGTCAACTTCCT+TGG	+	chr6.3:83847740-83847759	MS.gene75067:CDS	40.0%
	AATACGACGATGCTTCATGT+AGG	-	chr6.3:83846981-83847000	None:intergenic	40.0%
	ACCTTGATACCTAGCTACAA+AGG	-	chr6.3:83847324-83847343	None:intergenic	40.0%
	AGAGAACTGTCAACTTCCTT+GGG	+	chr6.3:83847741-83847760	MS.gene75067:CDS	40.0%
	AGGCTCAAAGGAATTTGTCT+TGG	+	chr6.3:83848152-83848171	MS.gene75067:intron	40.0%
	ATCAGATTCTCTATTCGACC+TGG	-	chr6.3:83847118-83847137	None:intergenic	40.0%
	ATGATGTCAAGCAAATCCCA+AGG	-	chr6.3:83847760-83847779	None:intergenic	40.0%
	ATGGCAAACGAACATGGAAT+TGG	+	chr6.3:83846767-83846786	MS.gene75067:CDS	40.0%
	ATGTTCCATGTGGCAAATAC+AGG	+	chr6.3:83848619-83848638	MS.gene75067:CDS	40.0%
	CAAGATAGACTTCTCTACCA+TGG	+	chr6.3:83848476-83848495	MS.gene75067:CDS	40.0%
	CTCAAAGGAATTTGTCTTGG+TGG	+	chr6.3:83848155-83848174	MS.gene75067:intron	40.0%
	GACAAATTCCTTTGAGCCTT+TGG	-	chr6.3:83848151-83848170	None:intergenic	40.0%
	GCAAAGTCAACAACCTTATG+TGG	-	chr6.3:83848252-83848271	None:intergenic	40.0%
	GGCAAATACAGGGTGTATAA+AGG	+	chr6.3:83848630-83848649	MS.gene75067:CDS	40.0%
	GGGAAAATTTGACTCACTTC+TGG	+	chr6.3:83847153-83847172	MS.gene75067:intron	40.0%
	TCAGATTCTCTATTCGACCT+GGG	-	chr6.3:83847117-83847136	None:intergenic	40.0%
	TCCTTTGTAGCTAGGTATCA+AGG	+	chr6.3:83847320-83847339	MS.gene75067:intron	40.0%
	TGCTTATTCGACACCACATA+AGG	+	chr6.3:83848236-83848255	MS.gene75067:intron	40.0%
	TGGCAAACGAACATGGAATT+GGG	+	chr6.3:83846768-83846787	MS.gene75067:CDS	40.0%
	TGTTCCATGTGGCAAATACA+GGG	+	chr6.3:83848620-83848639	MS.gene75067:CDS	40.0%
	TTATTGGTCACACATAGGGT+TGG	+	chr6.3:83848392-83848411	MS.gene75067:intron	40.0%
	TTATTTCACAAAACCTGCCC+AGG	+	chr6.3:83847097-83847116	MS.gene75067:intron	40.0%
!	ACTTCCGATTTGCCTATCAT+GGG	+	chr6.3:83847980-83847999	MS.gene75067:CDS	40.0%
!	AGTGCATAATACCTTTTCGG+CGG	-	chr6.3:83848549-83848568	None:intergenic	40.0%
!	CTGCCTATACCGTTTTGTAA+CGG	-	chr6.3:83847378-83847397	None:intergenic	40.0%
!	TACTTCCGATTTGCCTATCA+TGG	+	chr6.3:83847979-83847998	MS.gene75067:CDS	40.0%
!	TATTTTGTGTTCCGCCGAAA+AGG	+	chr6.3:83848535-83848554	MS.gene75067:CDS	40.0%
!!	ATAGGGTTGGTTAGTTGTGA+TGG	+	chr6.3:83848405-83848424	MS.gene75067:intron	40.0%
!!!	GTCTTGCTTGCTTTTTCCAA+AGG	+	chr6.3:83848132-83848151	MS.gene75067:intron	40.0%
!!!	TGCTTTTTCCAAAGGCTCAA+AGG	+	chr6.3:83848140-83848159	MS.gene75067:intron	40.0%
	ACACTTCCAATTCGACAACG+AGG	+	chr6.3:83847001-83847020	MS.gene75067:CDS	45.0%
	ACATGGAATTGGGTTTGTGG+AGG	+	chr6.3:83846778-83846797	MS.gene75067:CDS	45.0%
	CAACGAGGTGGTCATAGTAA+TGG	+	chr6.3:83847016-83847035	MS.gene75067:CDS	45.0%
	CAAGAACGATACCGCGATAT+CGG	+	chr6.3:83847352-83847371	MS.gene75067:intron	45.0%
	CGAACATGGAATTGGGTTTG+TGG	+	chr6.3:83846775-83846794	MS.gene75067:CDS	45.0%
	CGATATCGGCCGTTACAAAA+CGG	+	chr6.3:83847366-83847385	MS.gene75067:intron	45.0%
	GAGCGGCAATAAATAGGATG+TGG	-	chr6.3:83848711-83848730	None:intergenic	45.0%
	GGAAAAATCACACGCCGTTA+CGG	+	chr6.3:83847434-83847453	MS.gene75067:intron	45.0%
	TACACCCTGTATTTGCCACA+TGG	-	chr6.3:83848627-83848646	None:intergenic	45.0%
	TATGCCATCGATGTTCCATG+TGG	+	chr6.3:83848609-83848628	MS.gene75067:CDS	45.0%
	TCCACTAGAAGACCCATGAT+AGG	-	chr6.3:83847995-83848014	None:intergenic	45.0%
	TTCTCATAACCCCACATGTG+CGG	-	chr6.3:83848579-83848598	None:intergenic	45.0%
	TTTGCCACATGGAACATCGA+TGG	-	chr6.3:83848616-83848635	None:intergenic	45.0%
!	TTTTGTAACGGCCGATATCG+CGG	-	chr6.3:83847366-83847385	None:intergenic	45.0%
!!!	AAGATTTTTTTTTATTATTA+TGG	-	chr6.3:83847629-83847648	None:intergenic	5.0%
	AAAACGGTATAGGCAGCCAG+CGG	+	chr6.3:83847382-83847401	MS.gene75067:intron	50.0%
	ACGGCAAATAATGGTACCGC+TGG	-	chr6.3:83847401-83847420	None:intergenic	50.0%
	AGGATGTTTCGCAGCCGTAA+CGG	-	chr6.3:83847451-83847470	None:intergenic	50.0%
	ATTCTCTATTCGACCTGGGC+AGG	-	chr6.3:83847113-83847132	None:intergenic	50.0%
	CAAGCTGAGTATCCCTATGC+TGG	-	chr6.3:83848313-83848332	None:intergenic	50.0%
	CGGCCGTTACAAAACGGTAT+AGG	+	chr6.3:83847372-83847391	MS.gene75067:intron	50.0%
	CTTCCAATTCGACAACGAGG+TGG	+	chr6.3:83847004-83847023	MS.gene75067:CDS	50.0%
	GCCTATCATGGGTCTTCTAG+TGG	+	chr6.3:83847991-83848010	MS.gene75067:CDS	50.0%
	GCGCACCTTTGGACAAGTAA+TGG	-	chr6.3:83847889-83847908	None:intergenic	50.0%
	TCACTGACAAGGCCAGCATA+GGG	+	chr6.3:83848298-83848317	MS.gene75067:intron	50.0%
	TCTCATAACCCCACATGTGC+GGG	-	chr6.3:83848578-83848597	None:intergenic	50.0%
	TGACCACCTCGTTGTCGAAT+TGG	-	chr6.3:83847010-83847029	None:intergenic	50.0%
	ACTGAGCAACCCGCACATGT+GGG	+	chr6.3:83848566-83848585	MS.gene75067:CDS	55.0%
	GTCACTGACAAGGCCAGCAT+AGG	+	chr6.3:83848297-83848316	MS.gene75067:intron	55.0%
	CACTGAGCAACCCGCACATG+TGG	+	chr6.3:83848565-83848584	MS.gene75067:CDS	60.0%
	CTGAGCAACCCGCACATGTG+GGG	+	chr6.3:83848567-83848586	MS.gene75067:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr6.3	gene	83846767	83848800	83846767	ID=MS.gene75067
chr6.3	mRNA	83846767	83848800	83846767	ID=MS.gene75067.t1;Parent=MS.gene75067
chr6.3	exon	83846767	83847037	83846767	ID=MS.gene75067.t1.exon1;Parent=MS.gene75067.t1
chr6.3	CDS	83846767	83847037	83846767	ID=cds.MS.gene75067.t1;Parent=MS.gene75067.t1
chr6.3	exon	83847719	83848030	83847719	ID=MS.gene75067.t1.exon2;Parent=MS.gene75067.t1
chr6.3	CDS	83847719	83848030	83847719	ID=cds.MS.gene75067.t1;Parent=MS.gene75067.t1
chr6.3	exon	83848439	83848800	83848439	ID=MS.gene75067.t1.exon3;Parent=MS.gene75067.t1
chr6.3	CDS	83848439	83848800	83848439	ID=cds.MS.gene75067.t1;Parent=MS.gene75067.t1

Gene Sequence

>MS.gene75067

ATGGCAAACGAACATGGAATTGGGTTTGTGGAGGAAGTAAAATCTGTGTTTCAAGGTAAGAGGGAAGAGTATGAAGAGTTTATAAAAGACATACATGCTTTTAAGACGCTGATGAATGATCATCGAATCACCAGACTTCCAGTTCAAAATTTCAAAGAAAGGATGAATAAGGTACTTAAAGGGCGTAATCGTTTAATTTTGGGATTCAACGCCTACATGAAGCATCGTCGTATTACACTTCCAATTCGACAACGAGGTGGTCATAGTAATGGTTAGTACTTTTTTTTTTTTTTATGATTATGTTGATATTTTTTTATACTATATTGAAACTTATTTCACAAAACCTGCCCAGGTCGAATAGAGAATCTGATATATGTATGTTTTGGGGGAAAATTTGACTCACTTCTGGTGTGATATTTGCAAAATTGAAGAGTGTGTGTCATTTTAGCATACACCAAGGAGAGTTGAGTACAATTTCTCCAACAAATAACTGTCATGGTGTTTGTTTAAATATTATTCGTCTGATATATGTTTTGGGAAGGTCGTATATTATTCCTTTGTAGCTAGGTATCAAGGTTTTAAATACAAGAACGATACCGCGATATCGGCCGTTACAAAACGGTATAGGCAGCCAGCGGTACCATTATTTGCCGTTTTAATGTTGAGAGGAAAAATCACACGCCGTTACGGCTGCGAAACATCCTTAATTATGCTAGAACTTCATATATGTTTCTTCTTTTCAGCTTCATTACTCAATCTACATTGCTTCCTCTTCTACCTTCTTGTTTTTACTATTTTTTTCGAAAAAATGGGAAAATAAATATTTCTTTATCTCCTCCTTTTCTATGATATTATGGGACCATAATAATAAAAAAAAATCTTATGTTTTAGAAATATAGAAAAGAAACATGTTTGTAAATCACCTAACATCGTCGTTTTTTGTGATACAAAGGACAAAAAAAGAAGAAGGTAGAAGAGAACTGTCAACTTCCTTGGGATTTGCTTGACATCATTTTGAGGAATCTAGATTTTGATGACCTCTTTCAATTTGGCAGTGTATGCAAAAATTGGCGAGAATTTTATAAAATTTATTGGAAGAATTTCATGGCATCCGAAGAACCATTACTTGTCCAAAGGTGCGCTTTTAAGAAATCTTTCAACTTCTTCAACTTACCTCACGATAAAGTTTATCACTCAAAGATGATCAATAACTACTTCCGATTTGCCTATCATGGGTCTTCTAGTGGATATTTCATCATGACACGTAAAGATAATTCATTTATACTTATTAATCCATTTACAAGAAGAAAGATGCTAATCAATAACTCAGTCTTCAAAGTTGATTTCAAATTTTTTTCCTGCAAAGTCTTGCTTGCTTTTTCCAAAGGCTCAAAGGAATTTGTCTTGGTGGTTTCATGTAGAAATTCTGATAATTTGCATGTCTATCAATCTCGAAATCTTTGTTGGACTGCTTATTCGACACCACATAAGGTTGTTGACTTTGCTGTTTTAAATTATATCATATATGTTGTCACTGACAAGGCCAGCATAGGGATACTCAGCTTGAAATATGCAAATATAAATTTTTTAGAATTGAAGAGTAATCCTGGTGTAACTTCTAGTTATTATTGGTCACACATAGGGTTGGTTAGTTGTGATGGATATCTTTTAGTGCTTAATTTTATGTCAAAGGTAACGTATAACGTGTACAAGATAGACTTCTCTACCATGGATTATGTCAAGTTGGAATCTTTGGGTGACATTGCAATATTTTGTGTTCCGCCGAAAAGGTATTATGCACTGAGCAACCCGCACATGTGGGGTTATGAGAACAATTCTATCTATGCCATCGATGTTCCATGTGGCAAATACAGGGTGTATAAAGGAGATAACAAAAAAATGCCAGAATTCATTATTCCTGGTTTTAAACTTAGTGAACTTCCACATCCTATTTATTGCCGCTCAAAACAACGTTACATAGATTGGTGTTTTAGACATCTACAATATGAGGTAGATTATACTCTCGTTGAGTAG

Protein sequence

>MS.gene75067.t1

MANEHGIGFVEEVKSVFQGKREEYEEFIKDIHAFKTLMNDHRITRLPVQNFKERMNKVLKGRNRLILGFNAYMKHRRITLPIRQRGGHSNGQKKKKVEENCQLPWDLLDIILRNLDFDDLFQFGSVCKNWREFYKIYWKNFMASEEPLLVQRCAFKKSFNFFNLPHDKVYHSKMINNYFRFAYHGSSSGYFIMTLLNFMSKVTYNVYKIDFSTMDYVKLESLGDIAIFCVPPKRYYALSNPHMWGYENNSIYAIDVPCGKYRVYKGDNKKMPEFIIPGFKLSELPHPIYCRSKQRYIDWCFRHLQYEVDYTLVE