Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene071037.t1 | AES79590.1 | 93.4 | 350 | 23 | 0 | 1 | 350 | 1 | 350 | 2.90E-192 | 681 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene071037.t1 | G7KT89 | 93.4 | 350 | 23 | 0 | 1 | 350 | 1 | 350 | 2.1e-192 | 681.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene071037.t1 | MTR_7g070100 | 93.429 | 350 | 23 | 0 | 1 | 350 | 1 | 350 | 0.0 | 654 |
MS.gene071037.t1 | MTR_3g006120 | 57.434 | 343 | 142 | 4 | 8 | 347 | 8 | 349 | 4.50e-133 | 384 |
MS.gene071037.t1 | MTR_4g133490 | 59.312 | 349 | 136 | 4 | 3 | 348 | 1 | 346 | 1.81e-132 | 382 |
MS.gene071037.t1 | MTR_3g006100 | 56.977 | 344 | 144 | 4 | 8 | 348 | 8 | 350 | 2.75e-132 | 382 |
MS.gene071037.t1 | MTR_3g006180 | 56.380 | 337 | 143 | 4 | 14 | 347 | 1 | 336 | 1.23e-125 | 364 |
MS.gene071037.t1 | MTR_3g006140 | 53.736 | 348 | 157 | 4 | 5 | 349 | 27 | 373 | 1.62e-124 | 362 |
MS.gene071037.t1 | MTR_3g006010 | 54.942 | 344 | 151 | 4 | 7 | 347 | 124 | 466 | 2.21e-124 | 365 |
MS.gene071037.t1 | MTR_3g045700 | 53.693 | 352 | 149 | 8 | 6 | 350 | 6 | 350 | 4.72e-113 | 333 |
MS.gene071037.t1 | MTR_4g133320 | 58.576 | 309 | 122 | 4 | 43 | 348 | 1 | 306 | 2.70e-111 | 327 |
MS.gene071037.t1 | MTR_3g068220 | 51.412 | 354 | 159 | 6 | 5 | 348 | 5 | 355 | 7.24e-111 | 327 |
MS.gene071037.t1 | MTR_6g091830 | 49.157 | 356 | 166 | 7 | 6 | 350 | 104 | 455 | 6.29e-107 | 321 |
MS.gene071037.t1 | MTR_6g092140 | 48.876 | 356 | 167 | 7 | 6 | 350 | 104 | 455 | 7.95e-106 | 318 |
MS.gene071037.t1 | MTR_7g083950 | 51.977 | 354 | 153 | 9 | 5 | 350 | 88 | 432 | 1.93e-104 | 313 |
MS.gene071037.t1 | MTR_1g100280 | 46.499 | 357 | 145 | 11 | 6 | 350 | 15 | 337 | 2.20e-86 | 264 |
MS.gene071037.t1 | MTR_6g088340 | 47.170 | 318 | 149 | 9 | 46 | 350 | 122 | 433 | 4.35e-85 | 264 |
MS.gene071037.t1 | MTR_3g085910 | 43.925 | 321 | 118 | 6 | 5 | 312 | 4 | 275 | 1.36e-81 | 249 |
MS.gene071037.t1 | MTR_6g011110 | 47.670 | 279 | 133 | 4 | 82 | 350 | 2 | 277 | 7.69e-81 | 248 |
MS.gene071037.t1 | MTR_3g086480 | 48.638 | 257 | 123 | 5 | 88 | 341 | 2 | 252 | 4.64e-74 | 229 |
MS.gene071037.t1 | MTR_1g109340 | 50.988 | 253 | 115 | 4 | 102 | 349 | 106 | 354 | 1.10e-71 | 227 |
MS.gene071037.t1 | MTR_1g109520 | 53.797 | 158 | 68 | 3 | 197 | 349 | 19 | 176 | 3.36e-45 | 153 |
MS.gene071037.t1 | MTR_1g089620 | 57.143 | 119 | 49 | 1 | 176 | 294 | 32 | 148 | 5.44e-39 | 140 |
MS.gene071037.t1 | MTR_1g089085 | 52.857 | 140 | 60 | 3 | 5 | 142 | 40 | 175 | 2.32e-36 | 130 |
MS.gene071037.t1 | MTR_1g109090 | 53.782 | 119 | 53 | 2 | 6 | 122 | 18 | 136 | 3.06e-33 | 120 |
MS.gene071037.t1 | MTR_0128s0040 | 51.111 | 135 | 65 | 1 | 33 | 167 | 3 | 136 | 5.53e-33 | 120 |
MS.gene071037.t1 | MTR_6g023220 | 27.954 | 347 | 235 | 8 | 8 | 347 | 17 | 355 | 8.34e-32 | 123 |
MS.gene071037.t1 | MTR_1g106050 | 58.000 | 100 | 41 | 1 | 3 | 101 | 1 | 100 | 7.91e-30 | 111 |
MS.gene071037.t1 | MTR_1g012330 | 52.679 | 112 | 53 | 0 | 90 | 201 | 10 | 121 | 5.55e-28 | 110 |
MS.gene071037.t1 | MTR_1g093300 | 52.475 | 101 | 46 | 2 | 181 | 280 | 7 | 106 | 6.96e-25 | 98.6 |
MS.gene071037.t1 | MTR_6g091850 | 46.535 | 101 | 48 | 3 | 256 | 350 | 1 | 101 | 1.22e-19 | 83.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 80 sgRNAs with CRISPR-Local
Find 84 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACCTTCTTTCTTCTTCTAAA+TGG | 0.149247 | 7.3:-34832442 | None:intergenic |
TCCAAACTTCTTCATATTCT+AGG | 0.200364 | 7.3:+34832278 | MS.gene071037:CDS |
GAAATTATATCTAGCATTTC+CGG | 0.210930 | 7.3:-34832142 | None:intergenic |
GAAGAAGTTTGGAAAATTAA+AGG | 0.234327 | 7.3:-34832268 | None:intergenic |
TTCTAGTGGTTATCTAATTA+TGG | 0.249660 | 7.3:+34832387 | MS.gene071037:CDS |
GATGATCTCTTTCAATTTGC+TGG | 0.255762 | 7.3:+34832181 | MS.gene071037:CDS |
TTATGGGGATATTCCTATTC+CGG | 0.290074 | 7.3:+34832361 | MS.gene071037:CDS |
CTAGTAGATCAAACTTCTAT+TGG | 0.302250 | 7.3:+34833082 | MS.gene071037:CDS |
CAAACTTCTATTGGTTAGAT+TGG | 0.303466 | 7.3:+34833091 | MS.gene071037:CDS |
ATCATCGAAATCTAGATTCT+TGG | 0.315769 | 7.3:-34832164 | None:intergenic |
CCCTAGAATATGAAGAAGTT+TGG | 0.318755 | 7.3:-34832279 | None:intergenic |
CCTTCTTTCTTCTTCTAAAT+GGG | 0.320573 | 7.3:-34832441 | None:intergenic |
CGAAAACACATTGTGCCTTC+TGG | 0.321255 | 7.3:+34833045 | MS.gene071037:CDS |
TTCCAGCTTCTCATAATTCA+TGG | 0.322422 | 7.3:-34832872 | None:intergenic |
GCTTGAAGATGGGTAGCTTA+TGG | 0.338776 | 7.3:+34832344 | MS.gene071037:CDS |
CTTGAAGATGGGTAGCTTAT+GGG | 0.343222 | 7.3:+34832345 | MS.gene071037:CDS |
TGCAGAATGCCATGTGTATT+CGG | 0.344963 | 7.3:+34833005 | MS.gene071037:CDS |
TCTTCAAGCGGTAAGCTCTT+TGG | 0.347884 | 7.3:-34832330 | None:intergenic |
ATCAATCTCGCGATTCTGTT+TGG | 0.349486 | 7.3:+34832593 | MS.gene071037:CDS |
CCGTAACTTTCTCGTGCCTT+AGG | 0.353476 | 7.3:+34832767 | MS.gene071037:CDS |
CTCTCATATCCCCACTTGCT+CGG | 0.381323 | 7.3:-34832955 | None:intergenic |
TTTGGAAAATTAAAGGTGCT+TGG | 0.394702 | 7.3:-34832261 | None:intergenic |
TACACATCCAATACTTTCTC+GGG | 0.395877 | 7.3:-34832832 | None:intergenic |
GTACACATCCAATACTTTCT+CGG | 0.396731 | 7.3:-34832833 | None:intergenic |
TATGAGAAGCTGGAAACTTT+GGG | 0.406395 | 7.3:+34832880 | MS.gene071037:CDS |
TTGGAAAATTAAAGGTGCTT+GGG | 0.406624 | 7.3:-34832260 | None:intergenic |
ATGGAATGTTGTGGACTTTG+TGG | 0.412572 | 7.3:+34832642 | MS.gene071037:CDS |
AAGCGGTAAGCTCTTTGGTT+TGG | 0.413393 | 7.3:-34832325 | None:intergenic |
GTTTGGCGTACTCATTCCAT+AGG | 0.426409 | 7.3:+34832610 | MS.gene071037:CDS |
GACAAACTCTTCAGAACCTT+TGG | 0.426895 | 7.3:-34832530 | None:intergenic |
CCAAACTTCTTCATATTCTA+GGG | 0.427155 | 7.3:+34832279 | MS.gene071037:CDS |
CACAGGGGAAAAGATGATAA+TGG | 0.427700 | 7.3:+34832096 | None:intergenic |
TATGGGGATATTCCTATTCC+GGG | 0.435592 | 7.3:+34832362 | MS.gene071037:CDS |
TTATGAGAAGCTGGAAACTT+TGG | 0.436869 | 7.3:+34832879 | MS.gene071037:CDS |
ACCTTTGGCAAAAGCAAGTA+AGG | 0.446128 | 7.3:-34832515 | None:intergenic |
AAGAGCTTACCGCTTGAAGA+TGG | 0.452320 | 7.3:+34832333 | MS.gene071037:CDS |
TCTCATATCCCCACTTGCTC+GGG | 0.466999 | 7.3:-34832954 | None:intergenic |
ATTCCATGGATTTCGCCCTA+TGG | 0.468516 | 7.3:-34832626 | None:intergenic |
TTGCTGGTGTGTGCAAGAAC+TGG | 0.471044 | 7.3:+34832197 | MS.gene071037:CDS |
AACCATGAATTATGAGAAGC+TGG | 0.471305 | 7.3:+34832870 | MS.gene071037:CDS |
TAGTGGTTATCTAATTATGG+TGG | 0.475723 | 7.3:+34832390 | MS.gene071037:CDS |
CAATAGAAGTTTGATCTACT+AGG | 0.493687 | 7.3:-34833081 | None:intergenic |
AACTTTCTCGTGCCTTAGGT+TGG | 0.499150 | 7.3:+34832771 | MS.gene071037:CDS |
TCACTGACAAGGCGGACATA+GGG | 0.499246 | 7.3:+34832689 | MS.gene071037:CDS |
ACCACTAGAAGACCCGGAAT+AGG | 0.500724 | 7.3:-34832374 | None:intergenic |
ATCACTGACAAGGCGGACAT+AGG | 0.519317 | 7.3:+34832688 | MS.gene071037:CDS |
ATTCCATAGGGCGAAATCCA+TGG | 0.520075 | 7.3:+34832623 | MS.gene071037:CDS |
CCCATTTAGAAGAAGAAAGA+AGG | 0.522792 | 7.3:+34832441 | MS.gene071037:CDS |
ATCGATACCTCAGTGCTTCG+AGG | 0.526359 | 7.3:+34832466 | MS.gene071037:CDS |
ACAGGACTGTCAACTTCCTC+CGG | 0.530785 | 7.3:+34832123 | MS.gene071037:CDS |
TGTCCGCCTTGTCAGTGATA+AGG | 0.532182 | 7.3:-34832684 | None:intergenic |
TGCCTTAGGTTGGTTAGTTG+TGG | 0.536174 | 7.3:+34832781 | MS.gene071037:CDS |
TCCTATTCCGGGTCTTCTAG+TGG | 0.539771 | 7.3:+34832373 | MS.gene071037:CDS |
AAAGATGATAATGGAAGCAC+AGG | 0.544801 | 7.3:+34832105 | None:intergenic |
TTGTGGTGAGCAGCTTCTAG+TGG | 0.550341 | 7.3:+34832798 | MS.gene071037:CDS |
ACAAAGTCCACAACATTCCA+TGG | 0.554316 | 7.3:-34832640 | None:intergenic |
CTTTGAGCAACCCGAGCAAG+TGG | 0.555695 | 7.3:+34832944 | MS.gene071037:CDS |
AGAGCTTACCGCTTGAAGAT+GGG | 0.564669 | 7.3:+34832334 | MS.gene071037:CDS |
CCTAAGGCACGAGAAAGTTA+CGG | 0.568307 | 7.3:-34832767 | None:intergenic |
CACCACAACTAACCAACCTA+AGG | 0.568686 | 7.3:-34832783 | None:intergenic |
TTGAAGATGGGTAGCTTATG+GGG | 0.568759 | 7.3:+34832346 | MS.gene071037:CDS |
TGCTCGGGTTGCTCAAAGCA+CGG | 0.571874 | 7.3:-34832939 | None:intergenic |
AGTGGTTATCTAATTATGGT+GGG | 0.579988 | 7.3:+34832391 | MS.gene071037:CDS |
TCTACCTCATCATGTAAATG+TGG | 0.596221 | 7.3:-34833120 | None:intergenic |
TTTGGCGTACTCATTCCATA+GGG | 0.597247 | 7.3:+34832611 | MS.gene071037:CDS |
GCGAAATCCATGGAATGTTG+TGG | 0.600355 | 7.3:+34832633 | MS.gene071037:CDS |
TTGAGCAACCCGAGCAAGTG+GGG | 0.607882 | 7.3:+34832946 | MS.gene071037:CDS |
TATCATCCGCCGAATACACA+TGG | 0.621621 | 7.3:-34833014 | None:intergenic |
TAGATAACCACTAGAAGACC+CGG | 0.622971 | 7.3:-34832380 | None:intergenic |
TTTGAGCAACCCGAGCAAGT+GGG | 0.644025 | 7.3:+34832945 | MS.gene071037:CDS |
ATAAGCTACCCATCTTCAAG+CGG | 0.659986 | 7.3:-34832342 | None:intergenic |
AGGCACGAGAAAGTTACGGA+GGG | 0.676946 | 7.3:-34832763 | None:intergenic |
GGAGTTTGAAGACTACCAGA+AGG | 0.677143 | 7.3:-34833060 | None:intergenic |
ATTATATCTAGCATTTCCGG+AGG | 0.679240 | 7.3:-34832139 | None:intergenic |
TATACACCTTATCACTGACA+AGG | 0.694872 | 7.3:+34832678 | MS.gene071037:CDS |
AAGGCACGAGAAAGTTACGG+AGG | 0.701492 | 7.3:-34832764 | None:intergenic |
ACACCTTATCACTGACAAGG+CGG | 0.705237 | 7.3:+34832681 | MS.gene071037:CDS |
CTGGTGTGTGCAAGAACTGG+AGG | 0.709297 | 7.3:+34832200 | MS.gene071037:CDS |
AAATTTACCTCGAAGCACTG+AGG | 0.744997 | 7.3:-34832473 | None:intergenic |
AGAATGCCATGTGTATTCGG+CGG | 0.785877 | 7.3:+34833008 | MS.gene071037:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATTTACTGCATAAATTTTC+TGG | + | chr7.3:34832234-34832253 | MS.gene071037:CDS | 20.0% |
! | GAAATTATATCTAGCATTTC+CGG | - | chr7.3:34832145-34832164 | None:intergenic | 25.0% |
! | GAAGAAGTTTGGAAAATTAA+AGG | - | chr7.3:34832271-34832290 | None:intergenic | 25.0% |
! | TTCTAGTGGTTATCTAATTA+TGG | + | chr7.3:34832387-34832406 | MS.gene071037:CDS | 25.0% |
ACCTTCTTTCTTCTTCTAAA+TGG | - | chr7.3:34832445-34832464 | None:intergenic | 30.0% | |
AGTGGTTATCTAATTATGGT+GGG | + | chr7.3:34832391-34832410 | MS.gene071037:CDS | 30.0% | |
ATCATCGAAATCTAGATTCT+TGG | - | chr7.3:34832167-34832186 | None:intergenic | 30.0% | |
CAATAGAAGTTTGATCTACT+AGG | - | chr7.3:34833084-34833103 | None:intergenic | 30.0% | |
CCAAACTTCTTCATATTCTA+GGG | + | chr7.3:34832279-34832298 | MS.gene071037:CDS | 30.0% | |
CCTTCTTTCTTCTTCTAAAT+GGG | - | chr7.3:34832444-34832463 | None:intergenic | 30.0% | |
CTAGTAGATCAAACTTCTAT+TGG | + | chr7.3:34833082-34833101 | MS.gene071037:CDS | 30.0% | |
TAGTGGTTATCTAATTATGG+TGG | + | chr7.3:34832390-34832409 | MS.gene071037:CDS | 30.0% | |
TCCAAACTTCTTCATATTCT+AGG | + | chr7.3:34832278-34832297 | MS.gene071037:CDS | 30.0% | |
! | CAAACTTCTATTGGTTAGAT+TGG | + | chr7.3:34833091-34833110 | MS.gene071037:CDS | 30.0% |
! | TTTTCCACATTTACATGATG+AGG | + | chr7.3:34833116-34833135 | MS.gene071037:CDS | 30.0% |
!! | TTGGAAAATTAAAGGTGCTT+GGG | - | chr7.3:34832263-34832282 | None:intergenic | 30.0% |
!! | TTTGGAAAATTAAAGGTGCT+TGG | - | chr7.3:34832264-34832283 | None:intergenic | 30.0% |
AACCATGAATTATGAGAAGC+TGG | + | chr7.3:34832870-34832889 | MS.gene071037:CDS | 35.0% | |
ATTATATCTAGCATTTCCGG+AGG | - | chr7.3:34832142-34832161 | None:intergenic | 35.0% | |
CCCATTTAGAAGAAGAAAGA+AGG | + | chr7.3:34832441-34832460 | MS.gene071037:CDS | 35.0% | |
CCCTAGAATATGAAGAAGTT+TGG | - | chr7.3:34832282-34832301 | None:intergenic | 35.0% | |
GATGATCTCTTTCAATTTGC+TGG | + | chr7.3:34832181-34832200 | MS.gene071037:CDS | 35.0% | |
GTACACATCCAATACTTTCT+CGG | - | chr7.3:34832836-34832855 | None:intergenic | 35.0% | |
TACACATCCAATACTTTCTC+GGG | - | chr7.3:34832835-34832854 | None:intergenic | 35.0% | |
TATACACCTTATCACTGACA+AGG | + | chr7.3:34832678-34832697 | MS.gene071037:CDS | 35.0% | |
TATGAGAAGCTGGAAACTTT+GGG | + | chr7.3:34832880-34832899 | MS.gene071037:CDS | 35.0% | |
TCTACCTCATCATGTAAATG+TGG | - | chr7.3:34833123-34833142 | None:intergenic | 35.0% | |
TTATGAGAAGCTGGAAACTT+TGG | + | chr7.3:34832879-34832898 | MS.gene071037:CDS | 35.0% | |
TTATGGGGATATTCCTATTC+CGG | + | chr7.3:34832361-34832380 | MS.gene071037:CDS | 35.0% | |
TTCCAGCTTCTCATAATTCA+TGG | - | chr7.3:34832875-34832894 | None:intergenic | 35.0% | |
!! | TTTTGTACCCGAGAAAGTAT+TGG | + | chr7.3:34832825-34832844 | MS.gene071037:CDS | 35.0% |
!!! | CGAGGTAAATTTTCTAGTTC+TGG | + | chr7.3:34832484-34832503 | MS.gene071037:CDS | 35.0% |
!!! | TCGCATTTTTTTATTCGTCG+TGG | + | chr7.3:34832908-34832927 | MS.gene071037:CDS | 35.0% |
ACAAAGTCCACAACATTCCA+TGG | - | chr7.3:34832643-34832662 | None:intergenic | 40.0% | |
ACCTTTGGCAAAAGCAAGTA+AGG | - | chr7.3:34832518-34832537 | None:intergenic | 40.0% | |
ATAAGCTACCCATCTTCAAG+CGG | - | chr7.3:34832345-34832364 | None:intergenic | 40.0% | |
ATCAATCTCGCGATTCTGTT+TGG | + | chr7.3:34832593-34832612 | MS.gene071037:CDS | 40.0% | |
ATGGAATGTTGTGGACTTTG+TGG | + | chr7.3:34832642-34832661 | MS.gene071037:CDS | 40.0% | |
CTTGAAGATGGGTAGCTTAT+GGG | + | chr7.3:34832345-34832364 | MS.gene071037:CDS | 40.0% | |
GACAAACTCTTCAGAACCTT+TGG | - | chr7.3:34832533-34832552 | None:intergenic | 40.0% | |
TAGATAACCACTAGAAGACC+CGG | - | chr7.3:34832383-34832402 | None:intergenic | 40.0% | |
TATGGGGATATTCCTATTCC+GGG | + | chr7.3:34832362-34832381 | MS.gene071037:CDS | 40.0% | |
TGCAGAATGCCATGTGTATT+CGG | + | chr7.3:34833005-34833024 | MS.gene071037:CDS | 40.0% | |
TTGAAGATGGGTAGCTTATG+GGG | + | chr7.3:34832346-34832365 | MS.gene071037:CDS | 40.0% | |
TTTGGCGTACTCATTCCATA+GGG | + | chr7.3:34832611-34832630 | MS.gene071037:CDS | 40.0% | |
!! | AAATTTACCTCGAAGCACTG+AGG | - | chr7.3:34832476-34832495 | None:intergenic | 40.0% |
AACTTTCTCGTGCCTTAGGT+TGG | + | chr7.3:34832771-34832790 | MS.gene071037:CDS | 45.0% | |
AAGAGCTTACCGCTTGAAGA+TGG | + | chr7.3:34832333-34832352 | MS.gene071037:CDS | 45.0% | |
AAGCGGTAAGCTCTTTGGTT+TGG | - | chr7.3:34832328-34832347 | None:intergenic | 45.0% | |
ACACCTTATCACTGACAAGG+CGG | + | chr7.3:34832681-34832700 | MS.gene071037:CDS | 45.0% | |
AGAATGCCATGTGTATTCGG+CGG | + | chr7.3:34833008-34833027 | MS.gene071037:CDS | 45.0% | |
AGAGCTTACCGCTTGAAGAT+GGG | + | chr7.3:34832334-34832353 | MS.gene071037:CDS | 45.0% | |
ATTCCATAGGGCGAAATCCA+TGG | + | chr7.3:34832623-34832642 | MS.gene071037:CDS | 45.0% | |
ATTCCATGGATTTCGCCCTA+TGG | - | chr7.3:34832629-34832648 | None:intergenic | 45.0% | |
CACCACAACTAACCAACCTA+AGG | - | chr7.3:34832786-34832805 | None:intergenic | 45.0% | |
CCTAAGGCACGAGAAAGTTA+CGG | - | chr7.3:34832770-34832789 | None:intergenic | 45.0% | |
CGAAAACACATTGTGCCTTC+TGG | + | chr7.3:34833045-34833064 | MS.gene071037:CDS | 45.0% | |
GCGAAATCCATGGAATGTTG+TGG | + | chr7.3:34832633-34832652 | MS.gene071037:CDS | 45.0% | |
GCTTGAAGATGGGTAGCTTA+TGG | + | chr7.3:34832344-34832363 | MS.gene071037:CDS | 45.0% | |
GGAGTTTGAAGACTACCAGA+AGG | - | chr7.3:34833063-34833082 | None:intergenic | 45.0% | |
GTTTGGCGTACTCATTCCAT+AGG | + | chr7.3:34832610-34832629 | MS.gene071037:CDS | 45.0% | |
TATCATCCGCCGAATACACA+TGG | - | chr7.3:34833017-34833036 | None:intergenic | 45.0% | |
TCTTCAAGCGGTAAGCTCTT+TGG | - | chr7.3:34832333-34832352 | None:intergenic | 45.0% | |
!! | GCCTTACTTGCTTTTGCCAA+AGG | + | chr7.3:34832514-34832533 | MS.gene071037:CDS | 45.0% |
!! | TGCCTTAGGTTGGTTAGTTG+TGG | + | chr7.3:34832781-34832800 | MS.gene071037:CDS | 45.0% |
AAGGCACGAGAAAGTTACGG+AGG | - | chr7.3:34832767-34832786 | None:intergenic | 50.0% | |
ACAGGACTGTCAACTTCCTC+CGG | + | chr7.3:34832123-34832142 | MS.gene071037:CDS | 50.0% | |
ACCACTAGAAGACCCGGAAT+AGG | - | chr7.3:34832377-34832396 | None:intergenic | 50.0% | |
AGGCACGAGAAAGTTACGGA+GGG | - | chr7.3:34832766-34832785 | None:intergenic | 50.0% | |
ATCACTGACAAGGCGGACAT+AGG | + | chr7.3:34832688-34832707 | MS.gene071037:CDS | 50.0% | |
ATCGATACCTCAGTGCTTCG+AGG | + | chr7.3:34832466-34832485 | MS.gene071037:CDS | 50.0% | |
CCGTAACTTTCTCGTGCCTT+AGG | + | chr7.3:34832767-34832786 | MS.gene071037:CDS | 50.0% | |
CTCTCATATCCCCACTTGCT+CGG | - | chr7.3:34832958-34832977 | None:intergenic | 50.0% | |
TCACTGACAAGGCGGACATA+GGG | + | chr7.3:34832689-34832708 | MS.gene071037:CDS | 50.0% | |
TCCTATTCCGGGTCTTCTAG+TGG | + | chr7.3:34832373-34832392 | MS.gene071037:CDS | 50.0% | |
TCTCATATCCCCACTTGCTC+GGG | - | chr7.3:34832957-34832976 | None:intergenic | 50.0% | |
TGTCCGCCTTGTCAGTGATA+AGG | - | chr7.3:34832687-34832706 | None:intergenic | 50.0% | |
TTGCTGGTGTGTGCAAGAAC+TGG | + | chr7.3:34832197-34832216 | MS.gene071037:CDS | 50.0% | |
TTGTGGTGAGCAGCTTCTAG+TGG | + | chr7.3:34832798-34832817 | MS.gene071037:CDS | 50.0% | |
TTTGAGCAACCCGAGCAAGT+GGG | + | chr7.3:34832945-34832964 | MS.gene071037:CDS | 50.0% | |
CTGGTGTGTGCAAGAACTGG+AGG | + | chr7.3:34832200-34832219 | MS.gene071037:CDS | 55.0% | |
CTTTGAGCAACCCGAGCAAG+TGG | + | chr7.3:34832944-34832963 | MS.gene071037:CDS | 55.0% | |
TTGAGCAACCCGAGCAAGTG+GGG | + | chr7.3:34832946-34832965 | MS.gene071037:CDS | 55.0% | |
! | TGCTCGGGTTGCTCAAAGCA+CGG | - | chr7.3:34832942-34832961 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 34832109 | 34833161 | 34832109 | ID=MS.gene071037 |
chr7.3 | mRNA | 34832109 | 34833161 | 34832109 | ID=MS.gene071037.t1;Parent=MS.gene071037 |
chr7.3 | exon | 34832109 | 34833161 | 34832109 | ID=MS.gene071037.t1.exon1;Parent=MS.gene071037.t1 |
chr7.3 | CDS | 34832109 | 34833161 | 34832109 | ID=cds.MS.gene071037.t1;Parent=MS.gene071037.t1 |
Gene Sequence |
Protein sequence |