Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene53925.t1 | AES68336.2 | 94.9 | 352 | 18 | 0 | 1 | 352 | 1 | 352 | 5.30E-194 | 686.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene53925.t1 | G7J093 | 94.9 | 352 | 18 | 0 | 1 | 352 | 1 | 352 | 3.8e-194 | 686.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene53925.t1 | MTR_3g006120 | 94.886 | 352 | 18 | 0 | 1 | 352 | 1 | 352 | 0.0 | 691 |
MS.gene53925.t1 | MTR_3g006100 | 92.264 | 349 | 27 | 0 | 1 | 349 | 1 | 349 | 0.0 | 670 |
MS.gene53925.t1 | MTR_3g006180 | 92.604 | 338 | 25 | 0 | 14 | 351 | 1 | 338 | 0.0 | 649 |
MS.gene53925.t1 | MTR_3g006010 | 86.932 | 352 | 46 | 0 | 1 | 352 | 118 | 469 | 0.0 | 639 |
MS.gene53925.t1 | MTR_3g006140 | 73.837 | 344 | 90 | 0 | 4 | 347 | 26 | 369 | 0.0 | 533 |
MS.gene53925.t1 | MTR_4g133490 | 70.520 | 346 | 90 | 2 | 9 | 349 | 7 | 345 | 2.55e-168 | 473 |
MS.gene53925.t1 | MTR_4g133320 | 70.684 | 307 | 86 | 2 | 44 | 349 | 2 | 305 | 9.31e-146 | 414 |
MS.gene53925.t1 | MTR_3g068220 | 58.611 | 360 | 132 | 4 | 1 | 349 | 1 | 354 | 1.08e-138 | 398 |
MS.gene53925.t1 | MTR_6g091830 | 55.866 | 358 | 145 | 5 | 4 | 352 | 102 | 455 | 2.87e-135 | 393 |
MS.gene53925.t1 | MTR_6g092140 | 55.587 | 358 | 146 | 5 | 4 | 352 | 102 | 455 | 5.25e-134 | 390 |
MS.gene53925.t1 | MTR_7g070100 | 58.092 | 346 | 141 | 4 | 8 | 352 | 8 | 350 | 7.81e-129 | 373 |
MS.gene53925.t1 | MTR_3g045700 | 55.899 | 356 | 147 | 5 | 1 | 352 | 1 | 350 | 1.73e-127 | 369 |
MS.gene53925.t1 | MTR_7g083950 | 55.028 | 358 | 146 | 8 | 1 | 352 | 84 | 432 | 7.52e-119 | 350 |
MS.gene53925.t1 | MTR_6g088340 | 55.732 | 314 | 126 | 5 | 48 | 352 | 124 | 433 | 1.00e-109 | 327 |
MS.gene53925.t1 | MTR_1g100280 | 50.000 | 358 | 137 | 7 | 4 | 352 | 13 | 337 | 5.51e-105 | 311 |
MS.gene53925.t1 | MTR_6g011110 | 56.272 | 279 | 110 | 3 | 83 | 352 | 2 | 277 | 4.57e-100 | 297 |
MS.gene53925.t1 | MTR_1g109340 | 60.079 | 253 | 93 | 3 | 103 | 351 | 106 | 354 | 1.45e-94 | 286 |
MS.gene53925.t1 | MTR_3g085910 | 47.664 | 321 | 109 | 6 | 6 | 316 | 5 | 276 | 1.18e-91 | 275 |
MS.gene53925.t1 | MTR_3g086480 | 56.641 | 256 | 105 | 4 | 90 | 344 | 3 | 253 | 6.18e-86 | 260 |
MS.gene53925.t1 | MTR_1g109520 | 59.494 | 158 | 60 | 1 | 198 | 351 | 19 | 176 | 3.20e-57 | 184 |
MS.gene53925.t1 | MTR_1g089620 | 60.448 | 134 | 50 | 1 | 175 | 308 | 30 | 160 | 3.42e-47 | 162 |
MS.gene53925.t1 | MTR_1g012330 | 63.504 | 137 | 50 | 0 | 83 | 219 | 2 | 138 | 1.98e-45 | 156 |
MS.gene53925.t1 | MTR_1g089085 | 57.447 | 141 | 55 | 3 | 4 | 143 | 39 | 175 | 2.49e-45 | 153 |
MS.gene53925.t1 | MTR_1g109090 | 50.388 | 129 | 63 | 1 | 1 | 128 | 13 | 141 | 3.62e-35 | 126 |
MS.gene53925.t1 | MTR_1g106050 | 58.879 | 107 | 42 | 1 | 4 | 108 | 2 | 108 | 1.38e-34 | 124 |
MS.gene53925.t1 | MTR_6g023220 | 27.759 | 299 | 208 | 6 | 9 | 305 | 18 | 310 | 4.33e-29 | 115 |
MS.gene53925.t1 | MTR_1g093300 | 52.336 | 107 | 51 | 0 | 176 | 282 | 1 | 107 | 1.76e-27 | 105 |
MS.gene53925.t1 | MTR_0128s0040 | 42.105 | 133 | 75 | 2 | 33 | 165 | 3 | 133 | 3.88e-25 | 99.4 |
MS.gene53925.t1 | MTR_6g091850 | 43.564 | 101 | 51 | 2 | 258 | 352 | 1 | 101 | 3.89e-24 | 95.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 71 sgRNAs with CRISPR-Local
Find 83 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACCTTCTTTCTTCTTGTAAA+TGG | 0.145840 | 3.2:+940492 | None:intergenic |
TGTCTATCAGTCTGGAAATT+TGG | 0.158326 | 3.2:-940346 | MS.gene53925:CDS |
TTCTGGCACGTTGCTTATTC+TGG | 0.158749 | 3.2:-940573 | MS.gene53925:CDS |
GGGAATTTCATAAAACTTAT+TGG | 0.162427 | 3.2:-940716 | MS.gene53925:CDS |
ATAAGAAGAATTGACTTTAA+AGG | 0.192960 | 3.2:+940455 | None:intergenic |
CTATCATGCTTAATGTATTT+TGG | 0.196702 | 3.2:+939883 | None:intergenic |
TTTGAATAAGTAATGGTTCT+TGG | 0.234598 | 3.2:+940676 | None:intergenic |
TACCATGTCTTGCTTGCTTT+TGG | 0.255664 | 3.2:-940426 | MS.gene53925:CDS |
AAGATGGTTGTAAAATTTCT+TGG | 0.292218 | 3.2:-940815 | MS.gene53925:CDS |
TTCCATCTTGACAAAATTCA+TGG | 0.296900 | 3.2:+940059 | None:intergenic |
ACAACATGTAAAGTGTGTTT+AGG | 0.310726 | 3.2:-939922 | MS.gene53925:CDS |
GTCTATCAGTCTGGAAATTT+GGG | 0.319305 | 3.2:-940345 | MS.gene53925:CDS |
CTTTCAAAACCCCACCTTCT+CGG | 0.331626 | 3.2:+939976 | None:intergenic |
GGAAAAGGATTTCTTATCAT+TGG | 0.332744 | 3.2:+940647 | None:intergenic |
CAACATGTAAAGTGTGTTTA+GGG | 0.332853 | 3.2:-939921 | MS.gene53925:CDS |
GTCGCTTCATGTAAAAGTTC+TGG | 0.337852 | 3.2:-940378 | MS.gene53925:CDS |
AAAGGAAAACGCCTACTTGC+TGG | 0.351938 | 3.2:-939845 | MS.gene53925:CDS |
ATCAGTCTGGAAATTTGGGC+TGG | 0.359141 | 3.2:-940341 | MS.gene53925:CDS |
CCAAGGCGATCAATCAATTC+TGG | 0.360139 | 3.2:-940590 | MS.gene53925:CDS |
TACACCTATGTTGGCCTTGT+CGG | 0.389440 | 3.2:+940242 | None:intergenic |
AGATGGTTGTAAAATTTCTT+GGG | 0.404155 | 3.2:-940814 | MS.gene53925:CDS |
TTTCAAAACCCCACCTTCTC+GGG | 0.416348 | 3.2:+939977 | None:intergenic |
CAATAACCAGATTACTCAAC+TGG | 0.422972 | 3.2:+939781 | None:intergenic |
GATGACCTCTTTCAATTCGC+TGG | 0.428564 | 3.2:-940756 | MS.gene53925:CDS |
TAAACACACTTTACATGTTG+TGG | 0.439177 | 3.2:+939924 | None:intergenic |
AGCGGATATTTGATCATGAC+AGG | 0.440460 | 3.2:-940543 | MS.gene53925:CDS |
GTCATCGAAATCTAGATCTC+TGG | 0.451722 | 3.2:+940773 | None:intergenic |
TCGCTGGTGTGTGCAAGAAT+TGG | 0.467150 | 3.2:-940740 | MS.gene53925:CDS |
TTTGTCAAGATGGAAACTTT+GGG | 0.468280 | 3.2:-940051 | MS.gene53925:CDS |
AGTTTGTATGTCTATCAGTC+TGG | 0.474620 | 3.2:-940354 | MS.gene53925:CDS |
AAAACGCCTACTTGCTGGAT+TGG | 0.477038 | 3.2:-939840 | MS.gene53925:CDS |
CTCAGGATGGTTAGTTGTGA+TGG | 0.492017 | 3.2:-940147 | MS.gene53925:CDS |
TCCATTTACAAGAAGAAAGA+AGG | 0.500617 | 3.2:-940493 | MS.gene53925:CDS |
TCGGTCAGCTATGCTGATGA+AGG | 0.509137 | 3.2:+940626 | None:intergenic |
TCAGTCTGGAAATTTGGGCT+GGG | 0.521625 | 3.2:-940340 | MS.gene53925:CDS |
CCAGAATTGATTGATCGCCT+TGG | 0.527310 | 3.2:+940590 | None:intergenic |
GTAAACATTCAATATTTCCT+CGG | 0.528220 | 3.2:+940098 | None:intergenic |
AGCTATGCTGATGAAGGAAA+AGG | 0.531287 | 3.2:+940632 | None:intergenic |
ACAAAGTCAACAACCTTCCA+TGG | 0.536142 | 3.2:+940294 | None:intergenic |
TAACATCTACCTCACTCCTC+AGG | 0.540088 | 3.2:-940164 | MS.gene53925:CDS |
TGTTGTGGATGAAAGATTGA+TGG | 0.544678 | 3.2:+939939 | None:intergenic |
AGTGATTCATATTGCTTCCG+AGG | 0.546777 | 3.2:-940115 | MS.gene53925:CDS |
CAAGTCAAGTACACCTATGT+TGG | 0.548742 | 3.2:+940233 | None:intergenic |
ATTCAACAATGGAAAGTCCA+TGG | 0.553899 | 3.2:-940311 | MS.gene53925:CDS |
GCTTATTCTGGCTGTTCTAG+CGG | 0.565805 | 3.2:-940561 | MS.gene53925:CDS |
CATTGAGCAACCCGAGAAGG+TGG | 0.569290 | 3.2:-939987 | MS.gene53925:CDS |
AACAATGGAAAGTCCATGGA+AGG | 0.572932 | 3.2:-940307 | MS.gene53925:CDS |
ACACACCAGCGAATTGAAAG+AGG | 0.578254 | 3.2:+940751 | None:intergenic |
AGTGAGGTAGATGTTACATC+GGG | 0.579813 | 3.2:+940171 | None:intergenic |
ATGCATTGAGCAACCCGAGA+AGG | 0.585187 | 3.2:-939990 | MS.gene53925:CDS |
GCAATGAATAACATACAAGA+TGG | 0.590425 | 3.2:-940831 | MS.gene53925:CDS |
CTTTAGACATCTACACTATG+AGG | 0.594856 | 3.2:-939815 | MS.gene53925:CDS |
CTGGTGTGTGCAAGAATTGG+AGG | 0.595567 | 3.2:-940737 | MS.gene53925:CDS |
TGCCAAAAGCAAGCAAGACA+TGG | 0.610086 | 3.2:+940424 | None:intergenic |
GAGTGAGGTAGATGTTACAT+CGG | 0.616275 | 3.2:+940170 | None:intergenic |
ATTGAGCAACCCGAGAAGGT+GGG | 0.616952 | 3.2:-939986 | MS.gene53925:CDS |
CCGAAAAGTTTATCACTCCA+AGG | 0.620313 | 3.2:-940607 | MS.gene53925:CDS |
AAAGCACCAATCCAGCAAGT+AGG | 0.620337 | 3.2:+939834 | None:intergenic |
TTGAGCAACCCGAGAAGGTG+GGG | 0.622323 | 3.2:-939985 | MS.gene53925:CDS |
CTGGGTTACATATTCAACAA+TGG | 0.624667 | 3.2:-940322 | MS.gene53925:CDS |
GTCACCGACAAGGCCAACAT+AGG | 0.627828 | 3.2:-940246 | MS.gene53925:CDS |
ATCTACCTCACTCCTCAGGA+TGG | 0.644112 | 3.2:-940160 | MS.gene53925:CDS |
TAGAACTCGAGTTCCTCCAA+AGG | 0.651017 | 3.2:-939863 | MS.gene53925:CDS |
TAGACATCTACACTATGAGG+TGG | 0.658182 | 3.2:-939812 | MS.gene53925:CDS |
TATATACGTTGTCACCGACA+AGG | 0.661708 | 3.2:-940256 | MS.gene53925:CDS |
ACTAACCATCCTGAGGAGTG+AGG | 0.672997 | 3.2:+940155 | None:intergenic |
GCGGATATTTGATCATGACA+GGG | 0.678093 | 3.2:-940542 | MS.gene53925:CDS |
TGGTGTGTGCAAGAATTGGA+GGG | 0.700448 | 3.2:-940736 | MS.gene53925:CDS |
AACATGTAAAGTGTGTTTAG+GGG | 0.701783 | 3.2:-939920 | MS.gene53925:CDS |
CGGATATTTGATCATGACAG+GGG | 0.702309 | 3.2:-940541 | MS.gene53925:CDS |
CATCACAACTAACCATCCTG+AGG | 0.720834 | 3.2:+940148 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTCTAAAAATTTTATATCTG+TGG | + | chr3.2:940417-940436 | None:intergenic | 15.0% |
!!! | ATAAGAAGAATTGACTTTAA+AGG | + | chr3.2:940168-940187 | None:intergenic | 20.0% |
! | AACTTATTGGAAAAAGTTCT+TGG | - | chr3.2:939917-939936 | MS.gene53925:CDS | 25.0% |
! | AAGATGGTTGTAAAATTTCT+TGG | - | chr3.2:939805-939824 | MS.gene53925:CDS | 25.0% |
! | AGATGGTTGTAAAATTTCTT+GGG | - | chr3.2:939806-939825 | MS.gene53925:CDS | 25.0% |
! | GGGAATTTCATAAAACTTAT+TGG | - | chr3.2:939904-939923 | MS.gene53925:CDS | 25.0% |
! | GTAAACATTCAATATTTCCT+CGG | + | chr3.2:940525-940544 | None:intergenic | 25.0% |
! | TTTGAATAAGTAATGGTTCT+TGG | + | chr3.2:939947-939966 | None:intergenic | 25.0% |
!! | CTATCATGCTTAATGTATTT+TGG | + | chr3.2:940740-940759 | None:intergenic | 25.0% |
!! | GAAGACTTTTGAATAAGTAA+TGG | + | chr3.2:939954-939973 | None:intergenic | 25.0% |
!!! | ATTGCATTATTTTATGCTTC+GGG | - | chr3.2:940596-940615 | MS.gene53925:CDS | 25.0% |
!!! | CATTGCATTATTTTATGCTT+CGG | - | chr3.2:940595-940614 | MS.gene53925:CDS | 25.0% |
AACATGTAAAGTGTGTTTAG+GGG | - | chr3.2:940700-940719 | MS.gene53925:CDS | 30.0% | |
ACAACATGTAAAGTGTGTTT+AGG | - | chr3.2:940698-940717 | MS.gene53925:CDS | 30.0% | |
ACCTTCTTTCTTCTTGTAAA+TGG | + | chr3.2:940131-940150 | None:intergenic | 30.0% | |
CAACATGTAAAGTGTGTTTA+GGG | - | chr3.2:940699-940718 | MS.gene53925:CDS | 30.0% | |
GGAAAAGGATTTCTTATCAT+TGG | + | chr3.2:939976-939995 | None:intergenic | 30.0% | |
TAAACACACTTTACATGTTG+TGG | + | chr3.2:940699-940718 | None:intergenic | 30.0% | |
TCCATTTACAAGAAGAAAGA+AGG | - | chr3.2:940127-940146 | MS.gene53925:CDS | 30.0% | |
TTCCATCTTGACAAAATTCA+TGG | + | chr3.2:940564-940583 | None:intergenic | 30.0% | |
TTTGTCAAGATGGAAACTTT+GGG | - | chr3.2:940569-940588 | MS.gene53925:CDS | 30.0% | |
! | AACCATGAATTTTGTCAAGA+TGG | - | chr3.2:940559-940578 | MS.gene53925:CDS | 30.0% |
! | TTTTGTCAAGATGGAAACTT+TGG | - | chr3.2:940568-940587 | MS.gene53925:CDS | 30.0% |
!! | TTGCATTATTTTATGCTTCG+GGG | - | chr3.2:940597-940616 | MS.gene53925:CDS | 30.0% |
AGTTTGTATGTCTATCAGTC+TGG | - | chr3.2:940266-940285 | MS.gene53925:CDS | 35.0% | |
ATTCAACAATGGAAAGTCCA+TGG | - | chr3.2:940309-940328 | MS.gene53925:CDS | 35.0% | |
CTGGGTTACATATTCAACAA+TGG | - | chr3.2:940298-940317 | MS.gene53925:CDS | 35.0% | |
CTTTAGACATCTACACTATG+AGG | - | chr3.2:940805-940824 | MS.gene53925:CDS | 35.0% | |
GTCTATCAGTCTGGAAATTT+GGG | - | chr3.2:940275-940294 | MS.gene53925:CDS | 35.0% | |
TGTCTATCAGTCTGGAAATT+TGG | - | chr3.2:940274-940293 | MS.gene53925:CDS | 35.0% | |
TGTTGTGGATGAAAGATTGA+TGG | + | chr3.2:940684-940703 | None:intergenic | 35.0% | |
! | CCTTGGAGTGATAAACTTTT+CGG | + | chr3.2:940016-940035 | None:intergenic | 35.0% |
!! | TGCATTATTTTATGCTTCGG+GGG | - | chr3.2:940598-940617 | MS.gene53925:CDS | 35.0% |
AACAATGGAAAGTCCATGGA+AGG | - | chr3.2:940313-940332 | MS.gene53925:CDS | 40.0% | |
ACAAAGTCAACAACCTTCCA+TGG | + | chr3.2:940329-940348 | None:intergenic | 40.0% | |
AGCGGATATTTGATCATGAC+AGG | - | chr3.2:940077-940096 | MS.gene53925:CDS | 40.0% | |
AGCTATGCTGATGAAGGAAA+AGG | + | chr3.2:939991-940010 | None:intergenic | 40.0% | |
AGTGAGGTAGATGTTACATC+GGG | + | chr3.2:940452-940471 | None:intergenic | 40.0% | |
AGTGATTCATATTGCTTCCG+AGG | - | chr3.2:940505-940524 | MS.gene53925:CDS | 40.0% | |
CAAGTCAAGTACACCTATGT+TGG | + | chr3.2:940390-940409 | None:intergenic | 40.0% | |
CCGAAAAGTTTATCACTCCA+AGG | - | chr3.2:940013-940032 | MS.gene53925:CDS | 40.0% | |
CGGATATTTGATCATGACAG+GGG | - | chr3.2:940079-940098 | MS.gene53925:CDS | 40.0% | |
GAGTGAGGTAGATGTTACAT+CGG | + | chr3.2:940453-940472 | None:intergenic | 40.0% | |
GCGGATATTTGATCATGACA+GGG | - | chr3.2:940078-940097 | MS.gene53925:CDS | 40.0% | |
GTCATCGAAATCTAGATCTC+TGG | + | chr3.2:939850-939869 | None:intergenic | 40.0% | |
GTCGCTTCATGTAAAAGTTC+TGG | - | chr3.2:940242-940261 | MS.gene53925:CDS | 40.0% | |
TAGACATCTACACTATGAGG+TGG | - | chr3.2:940808-940827 | MS.gene53925:CDS | 40.0% | |
TATATACGTTGTCACCGACA+AGG | - | chr3.2:940364-940383 | MS.gene53925:CDS | 40.0% | |
! | TACCATGTCTTGCTTGCTTT+TGG | - | chr3.2:940194-940213 | MS.gene53925:CDS | 40.0% |
AAAGGAAAACGCCTACTTGC+TGG | - | chr3.2:940775-940794 | MS.gene53925:CDS | 45.0% | |
ACACACCAGCGAATTGAAAG+AGG | + | chr3.2:939872-939891 | None:intergenic | 45.0% | |
ATCAGTCTGGAAATTTGGGC+TGG | - | chr3.2:940279-940298 | MS.gene53925:CDS | 45.0% | |
CATCACAACTAACCATCCTG+AGG | + | chr3.2:940475-940494 | None:intergenic | 45.0% | |
CCAAGGCGATCAATCAATTC+TGG | - | chr3.2:940030-940049 | MS.gene53925:CDS | 45.0% | |
CCAGAATTGATTGATCGCCT+TGG | + | chr3.2:940033-940052 | None:intergenic | 45.0% | |
CTTTCAAAACCCCACCTTCT+CGG | + | chr3.2:940647-940666 | None:intergenic | 45.0% | |
GATGACCTCTTTCAATTCGC+TGG | - | chr3.2:939864-939883 | MS.gene53925:CDS | 45.0% | |
TAACATCTACCTCACTCCTC+AGG | - | chr3.2:940456-940475 | MS.gene53925:CDS | 45.0% | |
TAGAACTCGAGTTCCTCCAA+AGG | - | chr3.2:940757-940776 | MS.gene53925:CDS | 45.0% | |
TCAGTCTGGAAATTTGGGCT+GGG | - | chr3.2:940280-940299 | MS.gene53925:CDS | 45.0% | |
TGCCAAAAGCAAGCAAGACA+TGG | + | chr3.2:940199-940218 | None:intergenic | 45.0% | |
TGGTGTGTGCAAGAATTGGA+GGG | - | chr3.2:939884-939903 | MS.gene53925:CDS | 45.0% | |
TTCTGGCACGTTGCTTATTC+TGG | - | chr3.2:940047-940066 | MS.gene53925:CDS | 45.0% | |
TTTCAAAACCCCACCTTCTC+GGG | + | chr3.2:940646-940665 | None:intergenic | 45.0% | |
! | AAAACGCCTACTTGCTGGAT+TGG | - | chr3.2:940780-940799 | MS.gene53925:CDS | 45.0% |
! | AAAGCACCAATCCAGCAAGT+AGG | + | chr3.2:940789-940808 | None:intergenic | 45.0% |
! | AAGTAGGCGTTTTCCTTTGG+AGG | + | chr3.2:940773-940792 | None:intergenic | 45.0% |
! | AGCAAGTAGGCGTTTTCCTT+TGG | + | chr3.2:940776-940795 | None:intergenic | 45.0% |
! | CTCAGGATGGTTAGTTGTGA+TGG | - | chr3.2:940473-940492 | MS.gene53925:CDS | 45.0% |
! | GCTTATTCTGGCTGTTCTAG+CGG | - | chr3.2:940059-940078 | MS.gene53925:CDS | 45.0% |
!! | GTCTTGCTTGCTTTTGGCAA+AGG | - | chr3.2:940200-940219 | MS.gene53925:CDS | 45.0% |
!! | TACACCTATGTTGGCCTTGT+CGG | + | chr3.2:940381-940400 | None:intergenic | 45.0% |
ACTAACCATCCTGAGGAGTG+AGG | + | chr3.2:940468-940487 | None:intergenic | 50.0% | |
ATCTACCTCACTCCTCAGGA+TGG | - | chr3.2:940460-940479 | MS.gene53925:CDS | 50.0% | |
ATGCATTGAGCAACCCGAGA+AGG | - | chr3.2:940630-940649 | MS.gene53925:CDS | 50.0% | |
ATTGAGCAACCCGAGAAGGT+GGG | - | chr3.2:940634-940653 | MS.gene53925:CDS | 50.0% | |
CTGGTGTGTGCAAGAATTGG+AGG | - | chr3.2:939883-939902 | MS.gene53925:CDS | 50.0% | |
TCGCTGGTGTGTGCAAGAAT+TGG | - | chr3.2:939880-939899 | MS.gene53925:CDS | 50.0% | |
TCGGTCAGCTATGCTGATGA+AGG | + | chr3.2:939997-940016 | None:intergenic | 50.0% | |
! | TGCTTTTGGCAAAGGCTCAG+AGG | - | chr3.2:940208-940227 | MS.gene53925:CDS | 50.0% |
CATTGAGCAACCCGAGAAGG+TGG | - | chr3.2:940633-940652 | MS.gene53925:CDS | 55.0% | |
GTCACCGACAAGGCCAACAT+AGG | - | chr3.2:940374-940393 | MS.gene53925:CDS | 55.0% | |
TTGAGCAACCCGAGAAGGTG+GGG | - | chr3.2:940635-940654 | MS.gene53925:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 939792 | 940850 | 939792 | ID=MS.gene53925 |
chr3.2 | mRNA | 939792 | 940850 | 939792 | ID=MS.gene53925.t1;Parent=MS.gene53925 |
chr3.2 | exon | 939792 | 940850 | 939792 | ID=MS.gene53925.t1.exon1;Parent=MS.gene53925.t1 |
chr3.2 | CDS | 939792 | 940850 | 939792 | ID=cds.MS.gene53925.t1;Parent=MS.gene53925.t1 |
Gene Sequence |
Protein sequence |