Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007628.t1 | XP_003606457.2 | 98.7 | 232 | 3 | 0 | 1 | 232 | 1 | 232 | 9.30E-131 | 476.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007628.t1 | Q7DLR9 | 84.1 | 227 | 36 | 0 | 6 | 232 | 20 | 246 | 1.2e-115 | 417.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007628.t1 | G7JQG4 | 98.7 | 232 | 3 | 0 | 1 | 232 | 1 | 232 | 6.7e-131 | 476.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007628.t1 | MTR_4g060540 | 98.707 | 232 | 3 | 0 | 1 | 232 | 1 | 232 | 1.60e-174 | 479 |
| MS.gene007628.t1 | MTR_6g084450 | 91.810 | 232 | 19 | 0 | 1 | 232 | 1 | 232 | 2.78e-164 | 453 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007628.t1 | AT1G56450 | 84.141 | 227 | 36 | 0 | 6 | 232 | 20 | 246 | 1.96e-150 | 418 |
Find 69 sgRNAs with CRISPR-Local
Find 319 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGGGAAACATTCCCTTAT+TGG | 0.168463 | 4.2:-43461643 | MS.gene007628:CDS |
| GATTCTCATGGCTTCTGATA+TGG | 0.255390 | 4.2:-43462670 | MS.gene007628:CDS |
| TGAGGAAGGTGTTAGGTTAC+TGG | 0.271577 | 4.2:-43461019 | MS.gene007628:CDS |
| TTTCTCCACTGGCACCAATA+AGG | 0.276380 | 4.2:+43461629 | None:intergenic |
| TTCTCCACTGGCACCAATAA+GGG | 0.339803 | 4.2:+43461630 | None:intergenic |
| TAACTCGGGTGATGTATAAT+AGG | 0.358277 | 4.2:-43461310 | MS.gene007628:CDS |
| GTTGAGCGGGTGAAGCCTAT+TGG | 0.380343 | 4.2:-43461661 | MS.gene007628:CDS |
| TTGTGGAACTCCCTTGTACT+TGG | 0.381836 | 4.2:-43461269 | MS.gene007628:CDS |
| ATAAGGGAATGTTTCCCAAT+AGG | 0.385721 | 4.2:+43461646 | None:intergenic |
| AAATAGTTGTGCACCTCCTT+AGG | 0.402257 | 4.2:+43461332 | None:intergenic |
| TAAGCTTTGAGGAAGGTGTT+AGG | 0.415164 | 4.2:-43461026 | MS.gene007628:CDS |
| ATTCTCATGGCTTCTGATAT+GGG | 0.417780 | 4.2:-43462669 | MS.gene007628:CDS |
| AATATACTGATAGGTTCCTA+TGG | 0.421938 | 4.2:-43461706 | MS.gene007628:intron |
| TTGAGCGGGTGAAGCCTATT+GGG | 0.432842 | 4.2:-43461660 | MS.gene007628:CDS |
| TTTAGGTATCCTTATGTGAC+TGG | 0.434414 | 4.2:-43462726 | MS.gene007628:intron |
| GCATGAAAATTTAAGCTTTG+AGG | 0.455532 | 4.2:-43461037 | MS.gene007628:CDS |
| GAAGATGACCACATAGCTAC+TGG | 0.459759 | 4.2:-43461102 | MS.gene007628:CDS |
| TGCCACTCATCACGAAGAAT+CGG | 0.486184 | 4.2:+43461057 | None:intergenic |
| TGGAACTCCCTTGTACTTGG+TGG | 0.487933 | 4.2:-43461266 | MS.gene007628:CDS |
| GTCTGCTGTCAACAAGATAC+AGG | 0.491598 | 4.2:-43460962 | MS.gene007628:intron |
| AAAATCACTTATTTCTCCAC+TGG | 0.494634 | 4.2:+43461618 | None:intergenic |
| CTTATTCAGGTTAACATGAT+CGG | 0.498397 | 4.2:-43461135 | MS.gene007628:intron |
| GTTGCTATTAAATACAAAGA+TGG | 0.506960 | 4.2:-43462693 | MS.gene007628:CDS |
| ATGACAACATGTGGGATGAC+GGG | 0.507953 | 4.2:-43461367 | MS.gene007628:CDS |
| TTGCTATTAAATACAAAGAT+GGG | 0.508049 | 4.2:-43462692 | MS.gene007628:CDS |
| TCTTCACACCACCAAGTACA+AGG | 0.508905 | 4.2:+43461258 | None:intergenic |
| ATAGCTAAAATGACTGAAGA+AGG | 0.510679 | 4.2:-43458807 | MS.gene007628:CDS |
| GTACTTGGTGGTGTGAAGAA+TGG | 0.513027 | 4.2:-43461254 | MS.gene007628:CDS |
| TACTTGGTGGTGTGAAGAAT+GGG | 0.515172 | 4.2:-43461253 | MS.gene007628:CDS |
| ACAGAGGATCCAGTCACATA+AGG | 0.515515 | 4.2:+43462717 | None:intergenic |
| AATCCCACAGTTGGTGCTGA+AGG | 0.522601 | 4.2:-43458726 | MS.gene007628:CDS |
| TGGGATGACGGGAATTCTCT+AGG | 0.530096 | 4.2:-43461356 | MS.gene007628:CDS |
| CGGGAATTCTCTAGGACCTA+AGG | 0.530833 | 4.2:-43461348 | MS.gene007628:CDS |
| AATGACAACATGTGGGATGA+CGG | 0.531071 | 4.2:-43461368 | MS.gene007628:CDS |
| CAGTTGGTGCTGAAGGTTCG+TGG | 0.538915 | 4.2:-43458719 | MS.gene007628:CDS |
| CATTCCCTTATTGGTGCCAG+TGG | 0.542882 | 4.2:-43461634 | MS.gene007628:CDS |
| ATACAAAGATGGGATTCTCA+TGG | 0.559607 | 4.2:-43462682 | MS.gene007628:CDS |
| GAAAATTTAAGCTTTGAGGA+AGG | 0.566096 | 4.2:-43461033 | MS.gene007628:CDS |
| GCGATACAAGAGTGTTGAGC+GGG | 0.569229 | 4.2:-43461674 | MS.gene007628:CDS |
| CATCCCACATGTTGTCATTG+AGG | 0.570599 | 4.2:+43461372 | None:intergenic |
| GCTTTCAAGAATCCCACAGT+TGG | 0.572715 | 4.2:-43458735 | MS.gene007628:CDS |
| GGCCGATTCTTCGTGATGAG+TGG | 0.581874 | 4.2:-43461059 | MS.gene007628:CDS |
| GTAACAAGTTCAACCCTTTG+TGG | 0.588106 | 4.2:-43461286 | MS.gene007628:CDS |
| AGGTGCACAACTATTTAACT+CGG | 0.589584 | 4.2:-43461325 | MS.gene007628:CDS |
| GTACAAGGGAGTTCCACAAA+GGG | 0.594100 | 4.2:+43461273 | None:intergenic |
| GGCTAGGAAATCATCTTGCT+AGG | 0.594955 | 4.2:-43461080 | MS.gene007628:CDS |
| GGTTCTCTGTGATTCTGCTA+CGG | 0.596449 | 4.2:+43462910 | None:intergenic |
| GACCACATAGCTACTGGGCT+AGG | 0.599628 | 4.2:-43461096 | MS.gene007628:CDS |
| ATATACTGATAGGTTCCTAT+GGG | 0.603386 | 4.2:-43461705 | MS.gene007628:intron |
| CGAACCTTCAGCACCAACTG+TGG | 0.603921 | 4.2:+43458722 | None:intergenic |
| TTCCTAGCCCAGTAGCTATG+TGG | 0.613136 | 4.2:+43461094 | None:intergenic |
| AAGATGACCACATAGCTACT+GGG | 0.624683 | 4.2:-43461101 | MS.gene007628:CDS |
| AGCCAAGGCCTACCGTGCCG+AGG | 0.632061 | 4.2:+43461222 | None:intergenic |
| AGTACAAGGGAGTTCCACAA+AGG | 0.649488 | 4.2:+43461272 | None:intergenic |
| TTATGTGACTGGATCCTCTG+TGG | 0.651498 | 4.2:-43462715 | MS.gene007628:CDS |
| CTCATGGCTTCTGATATGGG+AGG | 0.651719 | 4.2:-43462666 | MS.gene007628:intron |
| GAACCTTCAGCACCAACTGT+GGG | 0.652084 | 4.2:+43458723 | None:intergenic |
| TAAGCTCGTCGAGGTAACGT+TGG | 0.657412 | 4.2:+43461587 | None:intergenic |
| AAGAATGGGCAAAAGTACCT+CGG | 0.660319 | 4.2:-43461239 | MS.gene007628:CDS |
| GTATCGCAGAGTAGACCCAT+AGG | 0.663332 | 4.2:+43461690 | None:intergenic |
| TGCGATACAAGAGTGTTGAG+CGG | 0.664038 | 4.2:-43461675 | MS.gene007628:CDS |
| GGTGCACAACTATTTAACTC+GGG | 0.664085 | 4.2:-43461324 | MS.gene007628:CDS |
| CTTCACACCACCAAGTACAA+GGG | 0.675705 | 4.2:+43461259 | None:intergenic |
| GAATTCTCTAGGACCTAAGG+AGG | 0.683114 | 4.2:-43461345 | MS.gene007628:CDS |
| TGGGCAAAAGTACCTCGGCA+CGG | 0.687461 | 4.2:-43461234 | MS.gene007628:intron |
| GTAGCCTCAATGACAACATG+TGG | 0.690284 | 4.2:-43461376 | MS.gene007628:intron |
| AGACTTACATAAGCTCGTCG+AGG | 0.707039 | 4.2:+43461578 | None:intergenic |
| TAGCCTCAATGACAACATGT+GGG | 0.733746 | 4.2:-43461375 | MS.gene007628:CDS |
| GTATTTAATAGCAACCACAG+AGG | 0.775432 | 4.2:+43462701 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAATAATAATAATAAT+TGG | + | chr4.2:43459262-43459281 | None:intergenic | 0.0% |
| !! | ATCTTAAATTTACAATTATT+AGG | - | chr4.2:43460930-43460949 | MS.gene007628:intron | 10.0% |
| !! | TCTTAAATTTACAATTATTA+GGG | - | chr4.2:43460931-43460950 | MS.gene007628:intron | 10.0% |
| !! | AAAAGTCTAACAATTTATAA+AGG | + | chr4.2:43462726-43462745 | None:intergenic | 15.0% |
| !! | AAGATAAAGACAATAAAATT+TGG | - | chr4.2:43460093-43460112 | MS.gene007628:intron | 15.0% |
| !! | AATTCTTTAATAAGATGTAA+GGG | - | chr4.2:43460774-43460793 | MS.gene007628:intron | 15.0% |
| !! | TAATTCTTTAATAAGATGTA+AGG | - | chr4.2:43460773-43460792 | MS.gene007628:intron | 15.0% |
| !! | TTTCCAAATGAAAAATAAAT+TGG | + | chr4.2:43461208-43461227 | None:intergenic | 15.0% |
| !!! | AAACCAATTTATTTTTCATT+TGG | - | chr4.2:43461202-43461221 | MS.gene007628:intron | 15.0% |
| !!! | ATTAGCTTTTAAATAAGTTT+AGG | - | chr4.2:43459073-43459092 | MS.gene007628:intron | 15.0% |
| !! | AATTGAAACAGAAAAAGATA+TGG | + | chr4.2:43462488-43462507 | None:intergenic | 20.0% |
| !! | AATTGAAATATCATGATGTA+TGG | - | chr4.2:43460863-43460882 | MS.gene007628:intron | 20.0% |
| !! | ATAATGAAAATACTCTCTAA+AGG | - | chr4.2:43462158-43462177 | MS.gene007628:intron | 20.0% |
| !! | ATTCTCATTAAAAACATACT+GGG | - | chr4.2:43462867-43462886 | MS.gene007628:intron | 20.0% |
| !! | ATTGAAAGAAAATAAAACAC+TGG | + | chr4.2:43459698-43459717 | None:intergenic | 20.0% |
| !! | GTCTAAATTAAAAAACAGAA+AGG | - | chr4.2:43460840-43460859 | MS.gene007628:intron | 20.0% |
| !! | TAAAAATAAGTCAATCCAAA+CGG | + | chr4.2:43459034-43459053 | None:intergenic | 20.0% |
| !! | TAAAAATCAAACCAACATTT+AGG | + | chr4.2:43458891-43458910 | None:intergenic | 20.0% |
| !! | TAATGAAAATACTCTCTAAA+GGG | - | chr4.2:43462159-43462178 | MS.gene007628:intron | 20.0% |
| !! | TGTATTTATGAATCTTATTC+AGG | - | chr4.2:43460485-43460504 | MS.gene007628:intron | 20.0% |
| !!! | AACTTGTTTTAAGAGAAAAT+TGG | - | chr4.2:43461423-43461442 | MS.gene007628:intron | 20.0% |
| !!! | CAAATTAACACAACTATTTT+TGG | + | chr4.2:43459638-43459657 | None:intergenic | 20.0% |
| !!! | TAAATGTTGGTTTGATTTTT+AGG | - | chr4.2:43458890-43458909 | MS.gene007628:intron | 20.0% |
| !!! | TTGCTATTAAATACAAAGAT+GGG | - | chr4.2:43458941-43458960 | MS.gene007628:intron | 20.0% |
| !!! | TTTTCAATTTACTCAGTTTA+TGG | - | chr4.2:43458800-43458819 | MS.gene007628:CDS | 20.0% |
| ! | AAAAAGTAATAGTAGTACAC+TGG | - | chr4.2:43461765-43461784 | MS.gene007628:intron | 25.0% |
| ! | AAGCACTTCATTAACTAATT+TGG | + | chr4.2:43459457-43459476 | None:intergenic | 25.0% |
| ! | AGTTCAAAATCAACACTTAA+AGG | + | chr4.2:43460228-43460247 | None:intergenic | 25.0% |
| ! | CAAAATAAAAAGAAAAGCCA+AGG | + | chr4.2:43460429-43460448 | None:intergenic | 25.0% |
| ! | CATTCTCATTAAAAACATAC+TGG | - | chr4.2:43462866-43462885 | MS.gene007628:intron | 25.0% |
| ! | GGACTATAATATAACAGAAT+GGG | - | chr4.2:43462180-43462199 | MS.gene007628:intron | 25.0% |
| ! | GTAATATCCAACATAAAAGA+AGG | + | chr4.2:43459746-43459765 | None:intergenic | 25.0% |
| ! | GTTCAAAATCAACACTTAAA+GGG | + | chr4.2:43460227-43460246 | None:intergenic | 25.0% |
| ! | TCTCTAGTAAATTCATTTGT+TGG | - | chr4.2:43458768-43458787 | MS.gene007628:CDS | 25.0% |
| ! | TCTCTTAATTTCATCTTGTA+AGG | - | chr4.2:43462448-43462467 | MS.gene007628:intron | 25.0% |
| ! | TGCATATTGAATATACTGAT+AGG | - | chr4.2:43459918-43459937 | MS.gene007628:intron | 25.0% |
| ! | TTCAATCCCAAATAAAGAAA+AGG | + | chr4.2:43461340-43461359 | None:intergenic | 25.0% |
| !! | AATCTGAAATAACTGAATTG+CGG | + | chr4.2:43460187-43460206 | None:intergenic | 25.0% |
| !! | ATGTTTTCCTTCTTTTATGT+TGG | - | chr4.2:43459736-43459755 | MS.gene007628:intron | 25.0% |
| !! | GATAATGATCGTTTATTTCT+TGG | - | chr4.2:43461113-43461132 | MS.gene007628:CDS | 25.0% |
| !! | GTTGCTATTAAATACAAAGA+TGG | - | chr4.2:43458940-43458959 | MS.gene007628:intron | 25.0% |
| !! | TTGAAATATACACTCAGTTT+TGG | - | chr4.2:43460818-43460837 | MS.gene007628:intron | 25.0% |
| !! | TTTGAAATTGACCTAAATGT+TGG | - | chr4.2:43458877-43458896 | MS.gene007628:intron | 25.0% |
| !!! | AGTTATTTTCTATGCAATTG+AGG | + | chr4.2:43460746-43460765 | None:intergenic | 25.0% |
| !!! | CAGTATGTTTTTAATGAGAA+TGG | + | chr4.2:43462868-43462887 | None:intergenic | 25.0% |
| !!! | GTTATTTTCTATGCAATTGA+GGG | + | chr4.2:43460745-43460764 | None:intergenic | 25.0% |
| !!! | TAAGTGTTGATTTTGAACTT+TGG | - | chr4.2:43460229-43460248 | MS.gene007628:intron | 25.0% |
| !!! | TAATTTCTTGCAGTTTGTTT+TGG | - | chr4.2:43461554-43461573 | MS.gene007628:intron | 25.0% |
| !!! | TATGTTTTTAATGAGAATGG+CGG | + | chr4.2:43462865-43462884 | None:intergenic | 25.0% |
| !!! | TTAGTCAATTGATTTGCATT+TGG | - | chr4.2:43460116-43460135 | MS.gene007628:intron | 25.0% |
| !!! | TTTTAACTGTAAATGTAACC+AGG | + | chr4.2:43462524-43462543 | None:intergenic | 25.0% |
| AACAATAAGCCAATTCAAAC+GGG | - | chr4.2:43459200-43459219 | MS.gene007628:intron | 30.0% | |
| AATATACTGATAGGTTCCTA+TGG | - | chr4.2:43459927-43459946 | MS.gene007628:intron | 30.0% | |
| AGCCTCAAATATTTGCTTAA+CGG | + | chr4.2:43461462-43461481 | None:intergenic | 30.0% | |
| AGGTTATTTGCAAAACTAAC+TGG | - | chr4.2:43461832-43461851 | MS.gene007628:intron | 30.0% | |
| ATAGCTAAAATGACTGAAGA+AGG | - | chr4.2:43462826-43462845 | MS.gene007628:intron | 30.0% | |
| ATATACTGATAGGTTCCTAT+GGG | - | chr4.2:43459928-43459947 | MS.gene007628:intron | 30.0% | |
| CAAATATTTGCTTAACGGAA+AGG | + | chr4.2:43461457-43461476 | None:intergenic | 30.0% | |
| CAACAATAAGCCAATTCAAA+CGG | - | chr4.2:43459199-43459218 | MS.gene007628:intron | 30.0% | |
| CTAAAACTCATTAACCACTA+AGG | + | chr4.2:43459483-43459502 | None:intergenic | 30.0% | |
| GAAAAAGATATGGTTAGAGT+CGG | + | chr4.2:43462478-43462497 | None:intergenic | 30.0% | |
| GAATAAGTGAAATGTGCAAA+GGG | + | chr4.2:43459226-43459245 | None:intergenic | 30.0% | |
| GAATTAGGAATTAAACCATG+AGG | - | chr4.2:43462004-43462023 | MS.gene007628:intron | 30.0% | |
| GCAATTTCAAACCTTACTTT+GGG | - | chr4.2:43459008-43459027 | MS.gene007628:intron | 30.0% | |
| GCATGAAAATTTAAGCTTTG+AGG | - | chr4.2:43460596-43460615 | MS.gene007628:intron | 30.0% | |
| GGGACTATAATATAACAGAA+TGG | - | chr4.2:43462179-43462198 | MS.gene007628:intron | 30.0% | |
| TAAAAGCAGTTTAACTAGTG+AGG | - | chr4.2:43461288-43461307 | MS.gene007628:CDS | 30.0% | |
| TACGAAAAAAATGTCACTAC+CGG | - | chr4.2:43461671-43461690 | MS.gene007628:CDS | 30.0% | |
| TATAGAATCCTTACTGTACA+AGG | - | chr4.2:43461591-43461610 | MS.gene007628:CDS | 30.0% | |
| TATATTTCAACAACCTCCAT+AGG | + | chr4.2:43460808-43460827 | None:intergenic | 30.0% | |
| TATGTTGGATATTACACTCT+TGG | - | chr4.2:43459751-43459770 | MS.gene007628:intron | 30.0% | |
| TCTGTGTTAGTTAATGAAGT+GGG | - | chr4.2:43459302-43459321 | MS.gene007628:intron | 30.0% | |
| TCTTAATACTCTGATTCCTA+GGG | + | chr4.2:43459615-43459634 | None:intergenic | 30.0% | |
| TGAATAAGTGAAATGTGCAA+AGG | + | chr4.2:43459227-43459246 | None:intergenic | 30.0% | |
| TGCAATTTCAAACCTTACTT+TGG | - | chr4.2:43459007-43459026 | MS.gene007628:intron | 30.0% | |
| TTCCGTTAAGCAAATATTTG+AGG | - | chr4.2:43461457-43461476 | MS.gene007628:intron | 30.0% | |
| TTCTGTGTTAGTTAATGAAG+TGG | - | chr4.2:43459301-43459320 | MS.gene007628:intron | 30.0% | |
| TTGGCTTATTGTTGAGATTA+TGG | + | chr4.2:43459193-43459212 | None:intergenic | 30.0% | |
| ! | AAAAAGATGGAGGATTTTTG+AGG | - | chr4.2:43461394-43461413 | MS.gene007628:intron | 30.0% |
| ! | AAAATCACTTATTTCTCCAC+TGG | + | chr4.2:43460018-43460037 | None:intergenic | 30.0% |
| ! | AGAGAGATAGACACATATTT+TGG | - | chr4.2:43462308-43462327 | MS.gene007628:intron | 30.0% |
| ! | AGGATAAGGTGAATCTTTTT+GGG | - | chr4.2:43462091-43462110 | MS.gene007628:intron | 30.0% |
| ! | ATTGGATTTTAAATCCACTC+CGG | - | chr4.2:43461867-43461886 | MS.gene007628:intron | 30.0% |
| ! | CTTATTCAGGTTAACATGAT+CGG | - | chr4.2:43460498-43460517 | MS.gene007628:intron | 30.0% |
| ! | TGGAGAAATAAGTGATTTTC+AGG | - | chr4.2:43460019-43460038 | MS.gene007628:intron | 30.0% |
| ! | TGTGGTTTGTCAATGAAATT+TGG | - | chr4.2:43461078-43461097 | MS.gene007628:CDS | 30.0% |
| ! | TTTATTTCTTGGTTTCTGCT+AGG | - | chr4.2:43461124-43461143 | MS.gene007628:CDS | 30.0% |
| ! | TTTCATCAGTTTTTCACTTG+TGG | - | chr4.2:43461060-43461079 | MS.gene007628:CDS | 30.0% |
| !! | ATATTTTGGAAAGACAGAGA+TGG | - | chr4.2:43462322-43462341 | MS.gene007628:intron | 30.0% |
| !! | ATGGAACTTTAAAGCTCTAA+GGG | - | chr4.2:43461802-43461821 | MS.gene007628:intron | 30.0% |
| !! | ATGGCACCTTTTCTTTATTT+GGG | - | chr4.2:43461331-43461350 | MS.gene007628:CDS | 30.0% |
| !! | ATGTTTTTAATGAGAATGGC+GGG | + | chr4.2:43462864-43462883 | None:intergenic | 30.0% |
| !! | GAAAATTTAAGCTTTGAGGA+AGG | - | chr4.2:43460600-43460619 | MS.gene007628:intron | 30.0% |
| !! | TAAAAGTATCGAGCATATGT+AGG | + | chr4.2:43461947-43461966 | None:intergenic | 30.0% |
| !!! | CAATTCAGTTTTTGTTTTCC+TGG | - | chr4.2:43462503-43462522 | MS.gene007628:intron | 30.0% |
| !!! | CGGTTAATGAGTTTTAGTTA+AGG | - | chr4.2:43459335-43459354 | MS.gene007628:intron | 30.0% |
| !!! | TGGTTAATGAGTTTTAGTTG+AGG | - | chr4.2:43459486-43459505 | MS.gene007628:intron | 30.0% |
| AAAAAAGGTCCCTAGTAATC+CGG | + | chr4.2:43459591-43459610 | None:intergenic | 35.0% | |
| AAAACTAACTGGAAGATGAG+AGG | - | chr4.2:43461843-43461862 | MS.gene007628:intron | 35.0% | |
| AAACTAACTGGAAGATGAGA+GGG | - | chr4.2:43461844-43461863 | MS.gene007628:intron | 35.0% | |
| AAAGATTCACCTTATCCTCA+AGG | + | chr4.2:43462089-43462108 | None:intergenic | 35.0% | |
| AAATTATTCTACCCGTGCAA+AGG | + | chr4.2:43461540-43461559 | None:intergenic | 35.0% | |
| AGAGAGCAAAAGAAACCTAA+AGG | + | chr4.2:43462433-43462452 | None:intergenic | 35.0% | |
| AGCATCTGAGTTCAATATCT+GGG | - | chr4.2:43459372-43459391 | MS.gene007628:intron | 35.0% | |
| AGGTGCACAACTATTTAACT+CGG | - | chr4.2:43460308-43460327 | MS.gene007628:intron | 35.0% | |
| ATAAGGGAATGTTTCCCAAT+AGG | + | chr4.2:43459990-43460009 | None:intergenic | 35.0% | |
| ATACAAAGATGGGATTCTCA+TGG | - | chr4.2:43458951-43458970 | MS.gene007628:intron | 35.0% | |
| ATATAACAGAATGGGACACA+TGG | - | chr4.2:43462188-43462207 | MS.gene007628:intron | 35.0% | |
| ATGTAGGCTTTCAAGGAATT+AGG | - | chr4.2:43461989-43462008 | MS.gene007628:intron | 35.0% | |
| ATTCTCATGGCTTCTGATAT+GGG | - | chr4.2:43458964-43458983 | MS.gene007628:intron | 35.0% | |
| ATTGGGAAACATTCCCTTAT+TGG | - | chr4.2:43459990-43460009 | MS.gene007628:intron | 35.0% | |
| CAAGATCAAGAGAGAAGATA+AGG | - | chr4.2:43462285-43462304 | MS.gene007628:intron | 35.0% | |
| CTAAAACTCATTAACCGCAA+AGG | + | chr4.2:43459332-43459351 | None:intergenic | 35.0% | |
| CTTAATACTCTGATTCCTAG+GGG | + | chr4.2:43459614-43459633 | None:intergenic | 35.0% | |
| CTTGGTAAATTGTGATTCCT+TGG | - | chr4.2:43459769-43459788 | MS.gene007628:intron | 35.0% | |
| GAAGTATATTGCAATTGCGT+AGG | - | chr4.2:43461255-43461274 | MS.gene007628:CDS | 35.0% | |
| GAGAATCTGAGTTTGATATC+TGG | - | chr4.2:43459522-43459541 | MS.gene007628:intron | 35.0% | |
| GAGAATTTATTTGGCAGTGA+GGG | - | chr4.2:43462226-43462245 | MS.gene007628:intron | 35.0% | |
| GAGAGTGGTGAGAATTTATT+TGG | - | chr4.2:43462217-43462236 | MS.gene007628:intron | 35.0% | |
| GGATTCTATACTGTGTTATG+TGG | + | chr4.2:43461581-43461600 | None:intergenic | 35.0% | |
| GTATTTAATAGCAACCACAG+AGG | + | chr4.2:43458935-43458954 | None:intergenic | 35.0% | |
| GTCTTAATACTCTGATTCCT+AGG | + | chr4.2:43459616-43459635 | None:intergenic | 35.0% | |
| TAACTCGGGTGATGTATAAT+AGG | - | chr4.2:43460323-43460342 | MS.gene007628:intron | 35.0% | |
| TGAAATAACTGAATTGCGGA+CGG | + | chr4.2:43460183-43460202 | None:intergenic | 35.0% | |
| TGAGAATTTATTTGGCAGTG+AGG | - | chr4.2:43462225-43462244 | MS.gene007628:intron | 35.0% | |
| TTTAGGTATCCTTATGTGAC+TGG | - | chr4.2:43458907-43458926 | MS.gene007628:intron | 35.0% | |
| TTTAGTTGAGGTCAGTTTGA+TGG | - | chr4.2:43459498-43459517 | MS.gene007628:intron | 35.0% | |
| ! | ACAATCAGCCCAATATTTTC+CGG | + | chr4.2:43459883-43459902 | None:intergenic | 35.0% |
| ! | ATTTGGGATTGAATCCTTCT+GGG | - | chr4.2:43461347-43461366 | MS.gene007628:CDS | 35.0% |
| ! | CATGGCACCTTTTCTTTATT+TGG | - | chr4.2:43461330-43461349 | MS.gene007628:CDS | 35.0% |
| ! | GAGGATAAGGTGAATCTTTT+TGG | - | chr4.2:43462090-43462109 | MS.gene007628:intron | 35.0% |
| ! | GATAAGGTGAATCTTTTTGG+GGG | - | chr4.2:43462093-43462112 | MS.gene007628:intron | 35.0% |
| ! | GGAATTATAAGGGTGTGTAA+CGG | - | chr4.2:43462247-43462266 | MS.gene007628:intron | 35.0% |
| ! | GGATAAGGTGAATCTTTTTG+GGG | - | chr4.2:43462092-43462111 | MS.gene007628:intron | 35.0% |
| ! | GTTAAGCAAATATTTGAGGC+TGG | - | chr4.2:43461461-43461480 | MS.gene007628:intron | 35.0% |
| ! | TATTTGGGATTGAATCCTTC+TGG | - | chr4.2:43461346-43461365 | MS.gene007628:CDS | 35.0% |
| ! | TTTTACTGCATTGGACCATT+AGG | - | chr4.2:43461962-43461981 | MS.gene007628:intron | 35.0% |
| ! | TTTTTCCGTTGGTACAATCT+TGG | - | chr4.2:43462673-43462692 | MS.gene007628:CDS | 35.0% |
| !! | AAAGCTCTAAGGGTTATAGT+AGG | - | chr4.2:43461812-43461831 | MS.gene007628:intron | 35.0% |
| !! | AGCTTTAAAGTTCCATGACT+AGG | + | chr4.2:43461798-43461817 | None:intergenic | 35.0% |
| !! | ATAAAGAAAAGGTGCCATGT+AGG | + | chr4.2:43461329-43461348 | None:intergenic | 35.0% |
| !! | CATGGAACTTTAAAGCTCTA+AGG | - | chr4.2:43461801-43461820 | MS.gene007628:intron | 35.0% |
| !! | CATTTCTTAGCTTTTTCCGT+TGG | - | chr4.2:43462662-43462681 | MS.gene007628:intron | 35.0% |
| !! | GCTATTTCTCATCTTCTGAT+AGG | + | chr4.2:43462581-43462600 | None:intergenic | 35.0% |
| AAAGACAGAGATGGAGAAAG+TGG | - | chr4.2:43462331-43462350 | MS.gene007628:intron | 40.0% | |
| AAAGCCTACATGACACCTAA+TGG | + | chr4.2:43461980-43461999 | None:intergenic | 40.0% | |
| AAATAGTTGTGCACCTCCTT+AGG | + | chr4.2:43460304-43460323 | None:intergenic | 40.0% | |
| AAATTCTCACCACTCTCCTA+AGG | + | chr4.2:43462214-43462233 | None:intergenic | 40.0% | |
| AAGATGACCACATAGCTACT+GGG | - | chr4.2:43460532-43460551 | MS.gene007628:intron | 40.0% | |
| AATGACAACATGTGGGATGA+CGG | - | chr4.2:43460265-43460284 | MS.gene007628:intron | 40.0% | |
| ACGTTAGTGGCAACCAAAAT+TGG | + | chr4.2:43461905-43461924 | None:intergenic | 40.0% | |
| ATCCAGATTCGAGGGATATT+GGG | - | chr4.2:43462367-43462386 | MS.gene007628:intron | 40.0% | |
| ATCTGAGTTCAATATCTGGG+TGG | - | chr4.2:43459375-43459394 | MS.gene007628:intron | 40.0% | |
| ATCTGAGTTTGATATCTGGC+TGG | - | chr4.2:43459526-43459545 | MS.gene007628:intron | 40.0% | |
| ATGCTTTCCTTTCCTTTGCA+CGG | - | chr4.2:43461525-43461544 | MS.gene007628:intron | 40.0% | |
| CCATTCTCCCGGAAAATATT+GGG | - | chr4.2:43459872-43459891 | MS.gene007628:intron | 40.0% | |
| CCTTACTGTACAAGGATTCA+AGG | - | chr4.2:43461599-43461618 | MS.gene007628:CDS | 40.0% | |
| CCTTGAATCCTTGTACAGTA+AGG | + | chr4.2:43461602-43461621 | None:intergenic | 40.0% | |
| GAGCATCTAAGTTCAATGTC+TGG | + | chr4.2:43459415-43459434 | None:intergenic | 40.0% | |
| GAGCATCTGAGTTCAATATC+TGG | - | chr4.2:43459371-43459390 | MS.gene007628:intron | 40.0% | |
| GATATCTGGCTGGAAATTCT+TGG | - | chr4.2:43459536-43459555 | MS.gene007628:intron | 40.0% | |
| GATTCTCATGGCTTCTGATA+TGG | - | chr4.2:43458963-43458982 | MS.gene007628:intron | 40.0% | |
| GGGATTAGAAAAATCCCAGA+AGG | + | chr4.2:43461364-43461383 | None:intergenic | 40.0% | |
| GGTGCACAACTATTTAACTC+GGG | - | chr4.2:43460309-43460328 | MS.gene007628:intron | 40.0% | |
| GTAACAAGTTCAACCCTTTG+TGG | - | chr4.2:43460347-43460366 | MS.gene007628:intron | 40.0% | |
| TAACCATCACCTTGAGGATA+AGG | - | chr4.2:43462077-43462096 | MS.gene007628:intron | 40.0% | |
| TACTAAAACCAGCACTTCCA+AGG | + | chr4.2:43459789-43459808 | None:intergenic | 40.0% | |
| TAGCCTCAATGACAACATGT+GGG | - | chr4.2:43460258-43460277 | MS.gene007628:intron | 40.0% | |
| TCTGATTCCTAGGGGAAAAA+AGG | + | chr4.2:43459606-43459625 | None:intergenic | 40.0% | |
| TGGCAGTGAGGGAATTATAA+GGG | - | chr4.2:43462237-43462256 | MS.gene007628:intron | 40.0% | |
| TGTGACAACCAACTCAGAAA+GGG | + | chr4.2:43460988-43461007 | None:intergenic | 40.0% | |
| TTACTAGAGAGAGAGAGAGA+GGG | + | chr4.2:43458758-43458777 | None:intergenic | 40.0% | |
| TTGGCAGTGAGGGAATTATA+AGG | - | chr4.2:43462236-43462255 | MS.gene007628:intron | 40.0% | |
| TTTACCTTAGAACCCTGTAC+TGG | - | chr4.2:43461623-43461642 | MS.gene007628:CDS | 40.0% | |
| TTTACTAGAGAGAGAGAGAG+AGG | + | chr4.2:43458759-43458778 | None:intergenic | 40.0% | |
| ! | ACTGGCTTATTACCTAGTCA+TGG | - | chr4.2:43461783-43461802 | MS.gene007628:intron | 40.0% |
| ! | AGCAAAGCACTATCACAAAC+CGG | + | chr4.2:43461693-43461712 | None:intergenic | 40.0% |
| ! | ATTTTAAATCCACTCCGGAC+TGG | - | chr4.2:43461872-43461891 | MS.gene007628:intron | 40.0% |
| ! | CAATATTTTCCGGGAGAATG+GGG | + | chr4.2:43459873-43459892 | None:intergenic | 40.0% |
| ! | CAATCAGCCCAATATTTTCC+GGG | + | chr4.2:43459882-43459901 | None:intergenic | 40.0% |
| ! | CCAATATTTTCCGGGAGAAT+GGG | + | chr4.2:43459874-43459893 | None:intergenic | 40.0% |
| ! | GCTCGATACTTTTACTGCAT+TGG | - | chr4.2:43461953-43461972 | MS.gene007628:intron | 40.0% |
| ! | GGATTTTTCTAATCCCCACT+TGG | - | chr4.2:43461368-43461387 | MS.gene007628:CDS | 40.0% |
| ! | GGTTGTTAAGAGTGTAGGAT+GGG | - | chr4.2:43462133-43462152 | MS.gene007628:intron | 40.0% |
| ! | GTATTTTCCTCACTCTGTTC+TGG | - | chr4.2:43462553-43462572 | MS.gene007628:intron | 40.0% |
| ! | GTGTGCTTTTATATCGCGAT+AGG | - | chr4.2:43460649-43460668 | MS.gene007628:intron | 40.0% |
| ! | TCCATCTTTTTGTGCCAAGT+GGG | + | chr4.2:43461385-43461404 | None:intergenic | 40.0% |
| ! | TGTAAGGGAGCATAATCCTA+TGG | - | chr4.2:43460789-43460808 | MS.gene007628:intron | 40.0% |
| ! | TTTTAAATCCACTCCGGACT+GGG | - | chr4.2:43461873-43461892 | MS.gene007628:intron | 40.0% |
| !! | AAGAATGGGCAAAAGTACCT+CGG | - | chr4.2:43460394-43460413 | MS.gene007628:intron | 40.0% |
| !! | AGATGGAGGATTTTTGAGGA+TGG | - | chr4.2:43461398-43461417 | MS.gene007628:intron | 40.0% |
| !! | GCTAGCAGGTTTTATCCTTT+AGG | - | chr4.2:43462415-43462434 | MS.gene007628:intron | 40.0% |
| !! | TAAGCTTTGAGGAAGGTGTT+AGG | - | chr4.2:43460607-43460626 | MS.gene007628:intron | 40.0% |
| !! | TACTTGGTGGTGTGAAGAAT+GGG | - | chr4.2:43460380-43460399 | MS.gene007628:intron | 40.0% |
| AAACCTTACTTTGGGCCGTT+TGG | - | chr4.2:43459016-43459035 | MS.gene007628:intron | 45.0% | |
| AAATTGGAGACTTCCCAGTC+CGG | + | chr4.2:43461889-43461908 | None:intergenic | 45.0% | |
| AACCATGAGGCTTCATGCTA+CGG | - | chr4.2:43462017-43462036 | MS.gene007628:intron | 45.0% | |
| AACTGGAAGATGAGAGGGAT+TGG | - | chr4.2:43461849-43461868 | MS.gene007628:intron | 45.0% | |
| AAGTTGAAACCCCATTCTCC+CGG | - | chr4.2:43459861-43459880 | MS.gene007628:intron | 45.0% | |
| AATCCAAACGGCCCAAAGTA+AGG | + | chr4.2:43459022-43459041 | None:intergenic | 45.0% | |
| ACAGAGATGGAGAAAGTGGA+TGG | - | chr4.2:43462335-43462354 | MS.gene007628:intron | 45.0% | |
| ACAGAGGATCCAGTCACATA+AGG | + | chr4.2:43458919-43458938 | None:intergenic | 45.0% | |
| ACAGCCATTAAACTCCCATC+GGG | + | chr4.2:43462045-43462064 | None:intergenic | 45.0% | |
| ACTACGAGCAGTAACGTTAG+TGG | + | chr4.2:43461918-43461937 | None:intergenic | 45.0% | |
| AGACTTACATAAGCTCGTCG+AGG | + | chr4.2:43460058-43460077 | None:intergenic | 45.0% | |
| AGATGGAGAAAGTGGATGGA+AGG | - | chr4.2:43462339-43462358 | MS.gene007628:intron | 45.0% | |
| AGATTCGAGGGATATTGGGT+GGG | - | chr4.2:43462371-43462390 | MS.gene007628:intron | 45.0% | |
| AGTACAAGGGAGTTCCACAA+AGG | + | chr4.2:43460364-43460383 | None:intergenic | 45.0% | |
| AGTGCTTTGCTTCCTTTCAG+TGG | - | chr4.2:43461702-43461721 | MS.gene007628:intron | 45.0% | |
| ATAGGAACCAGAACAGAGTG+AGG | + | chr4.2:43462563-43462582 | None:intergenic | 45.0% | |
| ATGAAGTGGGTGAACCTTTG+CGG | - | chr4.2:43459315-43459334 | MS.gene007628:intron | 45.0% | |
| ATGACAACATGTGGGATGAC+GGG | - | chr4.2:43460266-43460285 | MS.gene007628:intron | 45.0% | |
| ATTCTACCCGTGCAAAGGAA+AGG | + | chr4.2:43461535-43461554 | None:intergenic | 45.0% | |
| CACTTGGCACAAAAAGATGG+AGG | - | chr4.2:43461384-43461403 | MS.gene007628:intron | 45.0% | |
| CATCCCACATGTTGTCATTG+AGG | + | chr4.2:43460264-43460283 | None:intergenic | 45.0% | |
| CCCATTCTCCCGGAAAATAT+TGG | - | chr4.2:43459871-43459890 | MS.gene007628:intron | 45.0% | |
| CCTTTGTTCACTCCAGTACA+GGG | + | chr4.2:43461638-43461657 | None:intergenic | 45.0% | |
| CTGTGACAACCAACTCAGAA+AGG | + | chr4.2:43460989-43461008 | None:intergenic | 45.0% | |
| CTTCACACCACCAAGTACAA+GGG | + | chr4.2:43460377-43460396 | None:intergenic | 45.0% | |
| GAAGATGACCACATAGCTAC+TGG | - | chr4.2:43460531-43460550 | MS.gene007628:intron | 45.0% | |
| GACAGCCATTAAACTCCCAT+CGG | + | chr4.2:43462046-43462065 | None:intergenic | 45.0% | |
| GATCCAGATTCGAGGGATAT+TGG | - | chr4.2:43462366-43462385 | MS.gene007628:intron | 45.0% | |
| GCAGTTTAACTAGTGAGGAC+TGG | - | chr4.2:43461293-43461312 | MS.gene007628:CDS | 45.0% | |
| GCTTTCAAGAATCCCACAGT+TGG | - | chr4.2:43462898-43462917 | MS.gene007628:intron | 45.0% | |
| GGCTAGGAAATCATCTTGCT+AGG | - | chr4.2:43460553-43460572 | MS.gene007628:intron | 45.0% | |
| GGTTCTCTGTGATTCTGCTA+CGG | + | chr4.2:43458726-43458745 | None:intergenic | 45.0% | |
| GTACAAGGGAGTTCCACAAA+GGG | + | chr4.2:43460363-43460382 | None:intergenic | 45.0% | |
| GTAGCCTCAATGACAACATG+TGG | - | chr4.2:43460257-43460276 | MS.gene007628:intron | 45.0% | |
| GTCTGCTGTCAACAAGATAC+AGG | - | chr4.2:43460671-43460690 | MS.gene007628:intron | 45.0% | |
| GTTATCTCTCTGCTGAACTC+CGG | - | chr4.2:43459569-43459588 | MS.gene007628:intron | 45.0% | |
| TACTAGAGAGAGAGAGAGAG+GGG | + | chr4.2:43458757-43458776 | None:intergenic | 45.0% | |
| TCACCTTATCCTCAAGGTGA+TGG | + | chr4.2:43462083-43462102 | None:intergenic | 45.0% | |
| TCCTTTGTTCACTCCAGTAC+AGG | + | chr4.2:43461639-43461658 | None:intergenic | 45.0% | |
| TCTTCACACCACCAAGTACA+AGG | + | chr4.2:43460378-43460397 | None:intergenic | 45.0% | |
| TGCCACTCATCACGAAGAAT+CGG | + | chr4.2:43460579-43460598 | None:intergenic | 45.0% | |
| TGCTGAACTCCGGATTACTA+GGG | - | chr4.2:43459579-43459598 | MS.gene007628:intron | 45.0% | |
| TGCTTTCCTTTCCTTTGCAC+GGG | - | chr4.2:43461526-43461545 | MS.gene007628:intron | 45.0% | |
| TTATGTGACTGGATCCTCTG+TGG | - | chr4.2:43458918-43458937 | MS.gene007628:intron | 45.0% | |
| TTCCACAAGCATCCACTGAA+AGG | + | chr4.2:43461717-43461736 | None:intergenic | 45.0% | |
| TTCCGTTGGTACAATCTTGG+CGG | - | chr4.2:43462676-43462695 | MS.gene007628:CDS | 45.0% | |
| TTCCTTTCAGTGGATGCTTG+TGG | - | chr4.2:43461712-43461731 | MS.gene007628:intron | 45.0% | |
| TTCTCCACTGGCACCAATAA+GGG | + | chr4.2:43460006-43460025 | None:intergenic | 45.0% | |
| TTGTGGAACTCCCTTGTACT+TGG | - | chr4.2:43460364-43460383 | MS.gene007628:intron | 45.0% | |
| TTTCTCCACTGGCACCAATA+AGG | + | chr4.2:43460007-43460026 | None:intergenic | 45.0% | |
| ! | AAGGGAGCATAATCCTATGG+AGG | - | chr4.2:43460792-43460811 | MS.gene007628:intron | 45.0% |
| ! | AGGTGTCATGTAGGCTTTCA+AGG | - | chr4.2:43461982-43462001 | MS.gene007628:intron | 45.0% |
| ! | ATGAAGTGCTTGAGCCTTAG+TGG | - | chr4.2:43459466-43459485 | MS.gene007628:intron | 45.0% |
| ! | CCATCTTTTTGTGCCAAGTG+GGG | + | chr4.2:43461384-43461403 | None:intergenic | 45.0% |
| ! | CCCAATATTTTCCGGGAGAA+TGG | + | chr4.2:43459875-43459894 | None:intergenic | 45.0% |
| ! | CGGTTGTTAAGAGTGTAGGA+TGG | - | chr4.2:43462132-43462151 | MS.gene007628:intron | 45.0% |
| ! | CTCACGGTTGTTAAGAGTGT+AGG | - | chr4.2:43462128-43462147 | MS.gene007628:intron | 45.0% |
| ! | CTCCATCTTTTTGTGCCAAG+TGG | + | chr4.2:43461386-43461405 | None:intergenic | 45.0% |
| ! | GACTGGGAAGTCTCCAATTT+TGG | - | chr4.2:43461889-43461908 | MS.gene007628:intron | 45.0% |
| ! | TGGACCATTAGGTGTCATGT+AGG | - | chr4.2:43461973-43461992 | MS.gene007628:intron | 45.0% |
| ! | TTGTGATTCCTTGGAAGTGC+TGG | - | chr4.2:43459778-43459797 | MS.gene007628:intron | 45.0% |
| !! | ATAAGGGTGTGTAACGGACT+TGG | - | chr4.2:43462253-43462272 | MS.gene007628:intron | 45.0% |
| !! | GAATTCTCTAGGACCTAAGG+AGG | - | chr4.2:43460288-43460307 | MS.gene007628:intron | 45.0% |
| !! | GGGGAGTATTGTTAGACTCA+CGG | - | chr4.2:43462112-43462131 | MS.gene007628:intron | 45.0% |
| !! | GTACTTGGTGGTGTGAAGAA+TGG | - | chr4.2:43460379-43460398 | MS.gene007628:intron | 45.0% |
| !! | TGAGGAAGGTGTTAGGTTAC+TGG | - | chr4.2:43460614-43460633 | MS.gene007628:intron | 45.0% |
| !! | TGCGATACAAGAGTGTTGAG+CGG | - | chr4.2:43459958-43459977 | MS.gene007628:intron | 45.0% |
| !! | TGTAACGGACTTGGATAGGA+AGG | - | chr4.2:43462262-43462281 | MS.gene007628:intron | 45.0% |
| AAGGAGAGGATCCAGATTCG+AGG | - | chr4.2:43462358-43462377 | MS.gene007628:intron | 50.0% | |
| AGAATGGGACACATGGCCTT+AGG | - | chr4.2:43462195-43462214 | MS.gene007628:intron | 50.0% | |
| AGGAGAGGATCCAGATTCGA+GGG | - | chr4.2:43462359-43462378 | MS.gene007628:intron | 50.0% | |
| CACCCAATATCCCTCGAATC+TGG | + | chr4.2:43462372-43462391 | None:intergenic | 50.0% | |
| CACTCCAGTACAGGGTTCTA+AGG | + | chr4.2:43461630-43461649 | None:intergenic | 50.0% | |
| CAGATTCGAGGGATATTGGG+TGG | - | chr4.2:43462370-43462389 | MS.gene007628:intron | 50.0% | |
| CAGCCATTAAACTCCCATCG+GGG | + | chr4.2:43462044-43462063 | None:intergenic | 50.0% | |
| CATCTTACTCACCCCAACTC+GGG | - | chr4.2:43460718-43460737 | MS.gene007628:intron | 50.0% | |
| CCATCTTACTCACCCCAACT+CGG | - | chr4.2:43460717-43460736 | MS.gene007628:intron | 50.0% | |
| CCCCACTTGGCACAAAAAGA+TGG | - | chr4.2:43461381-43461400 | MS.gene007628:intron | 50.0% | |
| CCCTGTACTGGAGTGAACAA+AGG | - | chr4.2:43461635-43461654 | MS.gene007628:CDS | 50.0% | |
| CTCATGGCTTCTGATATGGG+AGG | - | chr4.2:43458967-43458986 | MS.gene007628:intron | 50.0% | |
| CTGCTGAACTCCGGATTACT+AGG | - | chr4.2:43459578-43459597 | MS.gene007628:intron | 50.0% | |
| CTGGTAAGCAGTAGCCTACA+TGG | - | chr4.2:43461312-43461331 | MS.gene007628:CDS | 50.0% | |
| GAACCTTCAGCACCAACTGT+GGG | + | chr4.2:43462913-43462932 | None:intergenic | 50.0% | |
| GACCGCCAAGATTGTACCAA+CGG | + | chr4.2:43462681-43462700 | None:intergenic | 50.0% | |
| GAGAAAGTGGATGGAAGGAG+AGG | - | chr4.2:43462344-43462363 | MS.gene007628:intron | 50.0% | |
| GCACATCTCCCTTTCTGAGT+TGG | - | chr4.2:43460977-43460996 | MS.gene007628:CDS | 50.0% | |
| GGATATTGGGTGGGAAAGTC+TGG | - | chr4.2:43462380-43462399 | MS.gene007628:intron | 50.0% | |
| GGTAAGGAACACAAGCTAGC+AGG | - | chr4.2:43462401-43462420 | MS.gene007628:intron | 50.0% | |
| GTATCGCAGAGTAGACCCAT+AGG | + | chr4.2:43459946-43459965 | None:intergenic | 50.0% | |
| GTCGCTTAACCATCACCTTG+AGG | - | chr4.2:43462071-43462090 | MS.gene007628:intron | 50.0% | |
| TAAGCTCGTCGAGGTAACGT+TGG | + | chr4.2:43460049-43460068 | None:intergenic | 50.0% | |
| TGCAAAGGGCCCGTTTGAAT+TGG | + | chr4.2:43459212-43459231 | None:intergenic | 50.0% | |
| TGGAACTCCCTTGTACTTGG+TGG | - | chr4.2:43460367-43460386 | MS.gene007628:intron | 50.0% | |
| TTCCTAGCCCAGTAGCTATG+TGG | + | chr4.2:43460542-43460561 | None:intergenic | 50.0% | |
| TTGAGCGGGTGAAGCCTATT+GGG | - | chr4.2:43459973-43459992 | MS.gene007628:intron | 50.0% | |
| TTGGGTGGGAAAGTCTGGTA+AGG | - | chr4.2:43462385-43462404 | MS.gene007628:intron | 50.0% | |
| ! | AGGTGATGGTTAAGCGACAC+TGG | + | chr4.2:43462069-43462088 | None:intergenic | 50.0% |
| ! | GGTGATGGTTAAGCGACACT+GGG | + | chr4.2:43462068-43462087 | None:intergenic | 50.0% |
| !! | AATCCCACAGTTGGTGCTGA+AGG | - | chr4.2:43462907-43462926 | MS.gene007628:intron | 50.0% |
| !! | CATTCCCTTATTGGTGCCAG+TGG | - | chr4.2:43459999-43460018 | MS.gene007628:intron | 50.0% |
| !! | CGGGAATTCTCTAGGACCTA+AGG | - | chr4.2:43460285-43460304 | MS.gene007628:intron | 50.0% |
| !! | GCGATACAAGAGTGTTGAGC+GGG | - | chr4.2:43459959-43459978 | MS.gene007628:intron | 50.0% |
| !! | GGTGTGTAACGGACTTGGAT+AGG | - | chr4.2:43462258-43462277 | MS.gene007628:intron | 50.0% |
| !! | TGGGATGACGGGAATTCTCT+AGG | - | chr4.2:43460277-43460296 | MS.gene007628:intron | 50.0% |
| !!! | CTAGGGACCTTTTTTCCCCT+AGG | - | chr4.2:43459596-43459615 | MS.gene007628:intron | 50.0% |
| AGAGAGAGAGGGGACGTACA+AGG | + | chr4.2:43458747-43458766 | None:intergenic | 55.0% | |
| CAATTGAGGGACCCGAGTTG+GGG | + | chr4.2:43460732-43460751 | None:intergenic | 55.0% | |
| CGAACCTTCAGCACCAACTG+TGG | + | chr4.2:43462914-43462933 | None:intergenic | 55.0% | |
| GACCACATAGCTACTGGGCT+AGG | - | chr4.2:43460537-43460556 | MS.gene007628:intron | 55.0% | |
| GCAATTGAGGGACCCGAGTT+GGG | + | chr4.2:43460733-43460752 | None:intergenic | 55.0% | |
| GGACCCCGATGGGAGTTTAA+TGG | - | chr4.2:43462038-43462057 | MS.gene007628:intron | 55.0% | |
| GTCCGTAGCATGAAGCCTCA+TGG | + | chr4.2:43462022-43462041 | None:intergenic | 55.0% | |
| GTTGAGCGGGTGAAGCCTAT+TGG | - | chr4.2:43459972-43459991 | MS.gene007628:intron | 55.0% | |
| TGCAATTGAGGGACCCGAGT+TGG | + | chr4.2:43460734-43460753 | None:intergenic | 55.0% | |
| TTCATGCTACGGACCCCGAT+GGG | - | chr4.2:43462028-43462047 | MS.gene007628:intron | 55.0% | |
| ! | CCGAGTTGGGGTGAGTAAGA+TGG | + | chr4.2:43460720-43460739 | None:intergenic | 55.0% |
| ! | GACACATGGCCTTAGGAGAG+TGG | - | chr4.2:43462202-43462221 | MS.gene007628:intron | 55.0% |
| ! | GGCCGATTCTTCGTGATGAG+TGG | - | chr4.2:43460574-43460593 | MS.gene007628:intron | 55.0% |
| !! | CAAAAGTACCTCGGCACGGT+AGG | - | chr4.2:43460403-43460422 | MS.gene007628:intron | 55.0% |
| !! | CAGTTGGTGCTGAAGGTTCG+TGG | - | chr4.2:43462914-43462933 | MS.gene007628:CDS | 55.0% |
| !! | TGGGCAAAAGTACCTCGGCA+CGG | - | chr4.2:43460399-43460418 | MS.gene007628:intron | 55.0% |
| CTTCATGCTACGGACCCCGA+TGG | - | chr4.2:43462027-43462046 | MS.gene007628:intron | 60.0% | |
| GGAGACTTCCCAGTCCGGAG+TGG | + | chr4.2:43461884-43461903 | None:intergenic | 65.0% | |
| TACCTCGGCACGGTAGGCCT+TGG | - | chr4.2:43460409-43460428 | MS.gene007628:intron | 65.0% | |
| AGCCAAGGCCTACCGTGCCG+AGG | + | chr4.2:43460414-43460433 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 43458716 | 43462939 | 43458716 | ID=MS.gene007628 |
| chr4.2 | mRNA | 43458716 | 43462939 | 43458716 | ID=MS.gene007628.t1;Parent=MS.gene007628 |
| chr4.2 | exon | 43462908 | 43462939 | 43462908 | ID=MS.gene007628.t1.exon1;Parent=MS.gene007628.t1 |
| chr4.2 | CDS | 43462908 | 43462939 | 43462908 | ID=cds.MS.gene007628.t1;Parent=MS.gene007628.t1 |
| chr4.2 | exon | 43462667 | 43462743 | 43462667 | ID=MS.gene007628.t1.exon2;Parent=MS.gene007628.t1 |
| chr4.2 | CDS | 43462667 | 43462743 | 43462667 | ID=cds.MS.gene007628.t1;Parent=MS.gene007628.t1 |
| chr4.2 | exon | 43461586 | 43461715 | 43461586 | ID=MS.gene007628.t1.exon3;Parent=MS.gene007628.t1 |
| chr4.2 | CDS | 43461586 | 43461715 | 43461586 | ID=cds.MS.gene007628.t1;Parent=MS.gene007628.t1 |
| chr4.2 | exon | 43461235 | 43461394 | 43461235 | ID=MS.gene007628.t1.exon4;Parent=MS.gene007628.t1 |
| chr4.2 | CDS | 43461235 | 43461394 | 43461235 | ID=cds.MS.gene007628.t1;Parent=MS.gene007628.t1 |
| chr4.2 | exon | 43460963 | 43461148 | 43460963 | ID=MS.gene007628.t1.exon5;Parent=MS.gene007628.t1 |
| chr4.2 | CDS | 43460963 | 43461148 | 43460963 | ID=cds.MS.gene007628.t1;Parent=MS.gene007628.t1 |
| chr4.2 | exon | 43458716 | 43458829 | 43458716 | ID=MS.gene007628.t1.exon6;Parent=MS.gene007628.t1 |
| chr4.2 | CDS | 43458716 | 43458829 | 43458716 | ID=cds.MS.gene007628.t1;Parent=MS.gene007628.t1 |
| Gene Sequence |
| Protein sequence |
