Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47175.t1 | XP_013451443.1 | 100 | 249 | 0 | 0 | 1 | 249 | 1 | 249 | 2.90E-138 | 501.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47175.t1 | O24362 | 88.8 | 249 | 28 | 0 | 1 | 249 | 1 | 249 | 6.8e-128 | 458.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47175.t1 | A0A072U8Q5 | 100.0 | 249 | 0 | 0 | 1 | 249 | 1 | 249 | 2.1e-138 | 501.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049887 | MS.gene47175 | 0.821487 | 3.93E-53 | -1.69E-46 |
| MS.gene050838 | MS.gene47175 | 0.827839 | 1.25E-54 | -1.69E-46 |
| MS.gene051233 | MS.gene47175 | 0.805808 | 1.12E-49 | -1.69E-46 |
| MS.gene051234 | MS.gene47175 | 0.807649 | 4.56E-50 | -1.69E-46 |
| MS.gene052335 | MS.gene47175 | 0.834263 | 3.32E-56 | -1.69E-46 |
| MS.gene052397 | MS.gene47175 | 0.803575 | 3.27E-49 | -1.69E-46 |
| MS.gene052609 | MS.gene47175 | 0.819963 | 8.81E-53 | -1.69E-46 |
| MS.gene053079 | MS.gene47175 | 0.800785 | 1.22E-48 | -1.69E-46 |
| MS.gene05462 | MS.gene47175 | 0.817502 | 3.19E-52 | -1.69E-46 |
| MS.gene057360 | MS.gene47175 | 0.827813 | 1.27E-54 | -1.69E-46 |
| MS.gene058639 | MS.gene47175 | 0.802342 | 5.87E-49 | -1.69E-46 |
| MS.gene058758 | MS.gene47175 | 0.811686 | 6.18E-51 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47175.t1 | MTR_6g024135 | 100.000 | 249 | 0 | 0 | 1 | 249 | 1 | 249 | 0.0 | 514 |
| MS.gene47175.t1 | MTR_0167s0060 | 36.612 | 183 | 116 | 0 | 8 | 190 | 6 | 188 | 4.64e-39 | 135 |
| MS.gene47175.t1 | MTR_1g022410 | 40.838 | 191 | 108 | 3 | 8 | 196 | 6 | 193 | 1.19e-38 | 136 |
| MS.gene47175.t1 | MTR_1g112250 | 34.783 | 207 | 120 | 2 | 6 | 203 | 6 | 206 | 4.45e-38 | 133 |
| MS.gene47175.t1 | MTR_7g070070 | 35.071 | 211 | 135 | 2 | 8 | 216 | 5 | 215 | 9.53e-38 | 133 |
| MS.gene47175.t1 | MTR_5g016590 | 35.071 | 211 | 135 | 2 | 8 | 216 | 5 | 215 | 2.10e-37 | 132 |
| MS.gene47175.t1 | MTR_8g464460 | 36.932 | 176 | 109 | 2 | 5 | 178 | 6 | 181 | 2.56e-32 | 119 |
| MS.gene47175.t1 | MTR_2g060830 | 35.227 | 176 | 112 | 2 | 5 | 178 | 6 | 181 | 3.03e-32 | 118 |
| MS.gene47175.t1 | MTR_8g075320 | 35.260 | 173 | 110 | 1 | 8 | 178 | 4 | 176 | 1.62e-29 | 111 |
| MS.gene47175.t1 | MTR_2g016050 | 35.260 | 173 | 110 | 1 | 8 | 178 | 4 | 176 | 4.98e-28 | 107 |
| MS.gene47175.t1 | MTR_4g012740 | 28.696 | 230 | 119 | 6 | 8 | 196 | 237 | 462 | 1.53e-17 | 82.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47175.t1 | AT2G27020 | 86.747 | 249 | 33 | 0 | 1 | 249 | 1 | 249 | 5.30e-168 | 464 |
| MS.gene47175.t1 | AT2G27020 | 86.747 | 249 | 33 | 0 | 1 | 249 | 103 | 351 | 1.22e-166 | 464 |
| MS.gene47175.t1 | AT1G47250 | 42.105 | 171 | 97 | 1 | 8 | 178 | 6 | 174 | 6.85e-39 | 136 |
| MS.gene47175.t1 | AT1G16470 | 34.146 | 205 | 134 | 1 | 8 | 211 | 6 | 210 | 6.85e-39 | 135 |
| MS.gene47175.t1 | AT1G16470 | 34.146 | 205 | 134 | 1 | 8 | 211 | 6 | 210 | 6.85e-39 | 135 |
| MS.gene47175.t1 | AT1G79210 | 34.146 | 205 | 134 | 1 | 8 | 211 | 6 | 210 | 8.05e-39 | 135 |
| MS.gene47175.t1 | AT1G79210 | 34.146 | 205 | 134 | 1 | 8 | 211 | 6 | 210 | 8.05e-39 | 135 |
| MS.gene47175.t1 | AT1G79210 | 34.146 | 205 | 134 | 1 | 8 | 211 | 6 | 210 | 8.05e-39 | 135 |
| MS.gene47175.t1 | AT5G42790 | 42.105 | 171 | 97 | 1 | 8 | 178 | 6 | 174 | 1.13e-38 | 136 |
| MS.gene47175.t1 | AT3G14290 | 34.783 | 207 | 120 | 2 | 6 | 203 | 6 | 206 | 3.60e-38 | 134 |
| MS.gene47175.t1 | AT1G53850 | 34.300 | 207 | 121 | 2 | 6 | 203 | 6 | 206 | 9.44e-38 | 132 |
| MS.gene47175.t1 | AT1G53850 | 34.300 | 207 | 121 | 2 | 6 | 203 | 6 | 206 | 9.44e-38 | 132 |
| MS.gene47175.t1 | AT3G22110 | 34.783 | 230 | 143 | 5 | 8 | 231 | 5 | 233 | 2.50e-37 | 132 |
| MS.gene47175.t1 | AT5G35590 | 34.659 | 176 | 113 | 2 | 5 | 178 | 6 | 181 | 1.75e-32 | 119 |
| MS.gene47175.t1 | AT2G05840 | 35.795 | 176 | 111 | 2 | 5 | 178 | 6 | 181 | 1.35e-31 | 116 |
| MS.gene47175.t1 | AT2G05840 | 35.795 | 176 | 111 | 2 | 5 | 178 | 6 | 181 | 1.99e-31 | 116 |
| MS.gene47175.t1 | AT2G05840 | 35.795 | 176 | 111 | 2 | 5 | 178 | 6 | 181 | 2.26e-31 | 115 |
| MS.gene47175.t1 | AT5G66140 | 34.104 | 173 | 112 | 1 | 8 | 178 | 4 | 176 | 1.33e-28 | 109 |
| MS.gene47175.t1 | AT3G51260 | 34.104 | 173 | 112 | 1 | 8 | 178 | 4 | 176 | 1.59e-28 | 108 |
| MS.gene47175.t1 | AT3G51260 | 34.104 | 173 | 112 | 1 | 8 | 178 | 4 | 176 | 2.70e-28 | 108 |
| MS.gene47175.t1 | AT4G15165 | 30.144 | 209 | 102 | 5 | 8 | 214 | 5 | 171 | 2.32e-20 | 86.3 |
Find 63 sgRNAs with CRISPR-Local
Find 279 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTGTTGCAGGACTGTTAT+TGG | 0.185948 | 6.3:-17260584 | MS.gene47175:intron |
| CCTTCGAAAATGATGCTTTC+GGG | 0.215701 | 6.3:-17260419 | MS.gene47175:CDS |
| TAATCTTGCTGCAGACCTTT+TGG | 0.265690 | 6.3:-17258972 | MS.gene47175:intron |
| GCAAGTTCCTTGACAGGAAT+TGG | 0.290742 | 6.3:+17259123 | None:intergenic |
| ATGCAAGGATGGAATTGTTT+TGG | 0.316941 | 6.3:-17260555 | MS.gene47175:intron |
| CCCTTCGAAAATGATGCTTT+CGG | 0.324696 | 6.3:-17260420 | MS.gene47175:CDS |
| TGCTAATTTAGCTGCTGTCT+TGG | 0.353141 | 6.3:+17257010 | None:intergenic |
| TGTGCAGAGGTGCACGTAAC+TGG | 0.359168 | 6.3:+17259089 | None:intergenic |
| TTTGTTGCAGGACTGTTATT+GGG | 0.360861 | 6.3:-17260583 | MS.gene47175:intron |
| GCCAAAGCTGTCGACAATAG+TGG | 0.361107 | 6.3:-17261584 | MS.gene47175:CDS |
| AACGGCGTGAATTCTTCTAT+TGG | 0.385310 | 6.3:+17260394 | None:intergenic |
| TGCACCTCTGCACATTATAC+TGG | 0.388962 | 6.3:-17259080 | MS.gene47175:CDS |
| TTGTACATGGTCGAACCTTC+TGG | 0.390091 | 6.3:-17258906 | MS.gene47175:CDS |
| TAAATTAGCACTTGAAGAAA+TGG | 0.392535 | 6.3:-17256997 | MS.gene47175:CDS |
| CTTTGGCAGCGTATTCGATC+TGG | 0.397223 | 6.3:+17261600 | None:intergenic |
| ATCTGGAAAACGCGGCCATC+AGG | 0.404104 | 6.3:+17261617 | None:intergenic |
| TTGTGCAAATGCAGTATATA+TGG | 0.408846 | 6.3:-17257439 | MS.gene47175:intron |
| CCCACTATTGTCGACAGCTT+TGG | 0.424001 | 6.3:+17261583 | None:intergenic |
| CTACTTCAATTACTCCTTGT+CGG | 0.425657 | 6.3:+17257557 | None:intergenic |
| TTTGGATGTGGTGTCATACT+AGG | 0.432245 | 6.3:-17258954 | MS.gene47175:CDS |
| GCTTCTTCTAGAAGCTCCTC+TGG | 0.439481 | 6.3:+17257032 | None:intergenic |
| TTCAATTACTCCTTGTCGGC+AGG | 0.452082 | 6.3:+17257561 | None:intergenic |
| CACGCCGTTCATCGCCACTC+TGG | 0.470804 | 6.3:-17260380 | MS.gene47175:CDS |
| CCTGTCGTAGTTAGTTGCTT+CGG | 0.482274 | 6.3:+17259688 | None:intergenic |
| ATGGAAGGCAAATTGTTGCC+AGG | 0.483133 | 6.3:-17259718 | MS.gene47175:CDS |
| ATTTCGAACTCGAAATGAGC+TGG | 0.484940 | 6.3:-17257390 | MS.gene47175:CDS |
| ATCATGAGTAGCATTGGAAC+AGG | 0.485653 | 6.3:-17261668 | MS.gene47175:CDS |
| ATCAAACCGTCAACATGAAA+AGG | 0.490739 | 6.3:-17257356 | MS.gene47175:intron |
| TCAGCAATCATGAGTAGCAT+TGG | 0.498196 | 6.3:-17261674 | None:intergenic |
| TGCAATCGGGAAGGGCAGAC+AGG | 0.508389 | 6.3:-17258731 | MS.gene47175:CDS |
| AGTTGCTTCGGACTTAGCCC+TGG | 0.513490 | 6.3:+17259700 | None:intergenic |
| CGATCAGCAAGTTCCTTGAC+AGG | 0.529831 | 6.3:+17259117 | None:intergenic |
| GTCACTACTTTCTCTCCTGA+TGG | 0.532524 | 6.3:-17261632 | MS.gene47175:CDS |
| GCACATTATACTGGTGGCTC+AGG | 0.538022 | 6.3:-17259071 | MS.gene47175:intron |
| CCGAAGCAACTAACTACGAC+AGG | 0.544505 | 6.3:-17259688 | MS.gene47175:intron |
| CAGGACTAGCTGCAGATGGA+AGG | 0.557444 | 6.3:-17259733 | MS.gene47175:CDS |
| AGTATGACACCACATCCAAA+AGG | 0.565132 | 6.3:+17258957 | None:intergenic |
| CCAAAGCTGTCGACAATAGT+GGG | 0.566060 | 6.3:-17261583 | MS.gene47175:intron |
| TTTGGTGCTGCAATCGGGAA+GGG | 0.566694 | 6.3:-17258739 | MS.gene47175:CDS |
| GTAGCAGGACTAGCTGCAGA+TGG | 0.578661 | 6.3:-17259737 | MS.gene47175:CDS |
| TGGAGTTCATGACGAGGCAA+AGG | 0.579021 | 6.3:-17257419 | MS.gene47175:CDS |
| CGTTCATCGCCACTCTGGAA+TGG | 0.579273 | 6.3:-17260375 | MS.gene47175:intron |
| CATTCCAGAGTGGCGATGAA+CGG | 0.580559 | 6.3:+17260376 | None:intergenic |
| AGATGGACCACAGTTGTACA+TGG | 0.581771 | 6.3:-17258919 | MS.gene47175:CDS |
| TGGTGATCCAATTCCTGTCA+AGG | 0.583937 | 6.3:-17259130 | MS.gene47175:CDS |
| TGGAAGGCAAATTGTTGCCA+GGG | 0.588037 | 6.3:-17259717 | MS.gene47175:CDS |
| GATTGAAAAGTTGAAGCTTG+CGG | 0.589401 | 6.3:-17257590 | MS.gene47175:CDS |
| ACCTCTGCACATTATACTGG+TGG | 0.589474 | 6.3:-17259077 | MS.gene47175:CDS |
| ATTGGGATCAGATGCAAGGA+TGG | 0.596379 | 6.3:-17260566 | MS.gene47175:CDS |
| TAATCTTGTGCAGGTTCCAG+AGG | 0.597205 | 6.3:-17257048 | MS.gene47175:intron |
| GCGGATATGACCTGCCGACA+AGG | 0.597273 | 6.3:-17257571 | MS.gene47175:CDS |
| CAAGGAACTTGCTGATCGCG+TGG | 0.607658 | 6.3:-17259112 | MS.gene47175:CDS |
| TTTCGAACTCGAAATGAGCT+GGG | 0.612900 | 6.3:-17257389 | MS.gene47175:CDS |
| ATCAGGAGAGAAAGTAGTGA+CGG | 0.620720 | 6.3:+17261634 | None:intergenic |
| CTAGGTGGTTACGACAGAGA+TGG | 0.638286 | 6.3:-17258936 | MS.gene47175:CDS |
| TGTTATTGGGATCAGATGCA+AGG | 0.646757 | 6.3:-17260570 | MS.gene47175:CDS |
| GGATGTGGTGTCATACTAGG+TGG | 0.653371 | 6.3:-17258951 | MS.gene47175:CDS |
| CGTATTCGATCTGGAAAACG+CGG | 0.653640 | 6.3:+17261609 | None:intergenic |
| CTCACATAAGAGACACCAGA+AGG | 0.679277 | 6.3:+17258891 | None:intergenic |
| GCCACCAGTATAATGTGCAG+AGG | 0.679994 | 6.3:+17259076 | None:intergenic |
| GGTTCGACCATGTACAACTG+TGG | 0.719686 | 6.3:+17258912 | None:intergenic |
| AACAAAGTACCATTCCAGAG+TGG | 0.731365 | 6.3:+17260366 | None:intergenic |
| TATATATGGAGTTCATGACG+AGG | 0.744573 | 6.3:-17257425 | MS.gene47175:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTAAATTATTAATTAA+AGG | - | chr6.3:17257925-17257944 | MS.gene47175:intron | 0.0% |
| !! | AAAAAAAAAAAAAATTCACA+TGG | + | chr6.3:17259853-17259872 | None:intergenic | 10.0% |
| !! | AAAAAAATCAAAAATTAAAC+AGG | + | chr6.3:17258162-17258181 | None:intergenic | 10.0% |
| !! | TACATTTAATTAACAAAAAA+AGG | + | chr6.3:17260906-17260925 | None:intergenic | 10.0% |
| !!! | ATAATTTTATTTGTTTAACT+CGG | - | chr6.3:17260522-17260541 | MS.gene47175:intron | 10.0% |
| !!! | TTCTTTTAATTACTTATATA+TGG | - | chr6.3:17261363-17261382 | MS.gene47175:intron | 10.0% |
| !! | CATTCTATATAATAATATGT+AGG | + | chr6.3:17258621-17258640 | None:intergenic | 15.0% |
| !! | TAATAAGCATATTTCATATA+AGG | + | chr6.3:17260275-17260294 | None:intergenic | 15.0% |
| !!! | AAACTTAAAACACAATATTT+TGG | - | chr6.3:17260476-17260495 | MS.gene47175:intron | 15.0% |
| !!! | ATTTTAAGAATTGGAATTAA+GGG | - | chr6.3:17257956-17257975 | MS.gene47175:intron | 15.0% |
| !!! | GCAATTGAATTTTTATTTTT+AGG | - | chr6.3:17257211-17257230 | MS.gene47175:intron | 15.0% |
| !!! | GTAGTTTTTATTTTAAGAAT+TGG | - | chr6.3:17257991-17258010 | MS.gene47175:intron | 15.0% |
| !!! | GTTTTAGTTATTTTAAGAAT+TGG | - | chr6.3:17257947-17257966 | MS.gene47175:intron | 15.0% |
| !!! | TATTTTAAGAATTGGAATTA+AGG | - | chr6.3:17257955-17257974 | MS.gene47175:intron | 15.0% |
| !!! | TGAAATGTAGTTTTATTTTA+AGG | - | chr6.3:17257843-17257862 | MS.gene47175:intron | 15.0% |
| !!! | TTTATTTTAAGGTTTTTGTT+TGG | - | chr6.3:17257854-17257873 | MS.gene47175:intron | 15.0% |
| !! | AAACATAGACAGTAATTAAA+AGG | + | chr6.3:17260015-17260034 | None:intergenic | 20.0% |
| !! | ATATTATTTACAGATAGCAA+AGG | + | chr6.3:17260069-17260088 | None:intergenic | 20.0% |
| !! | ATGAAATATGCTTATTAGAA+TGG | - | chr6.3:17260278-17260297 | MS.gene47175:intron | 20.0% |
| !! | TCGATAAATGTAAAAAATAC+TGG | - | chr6.3:17260597-17260616 | MS.gene47175:intron | 20.0% |
| !! | TGGTGTATTTAATCAAATAA+AGG | + | chr6.3:17259029-17259048 | None:intergenic | 20.0% |
| !! | TGTAAAACAAAATTCTGATA+TGG | + | chr6.3:17261012-17261031 | None:intergenic | 20.0% |
| !! | TGTATTTAATCAAATAAAGG+AGG | + | chr6.3:17259026-17259045 | None:intergenic | 20.0% |
| !! | TTATATTATTGTTCAGTGTA+TGG | - | chr6.3:17260871-17260890 | MS.gene47175:intron | 20.0% |
| !! | TTTAATTACTGTCTATGTTT+GGG | - | chr6.3:17260015-17260034 | MS.gene47175:intron | 20.0% |
| !!! | ACAAATCTTTTTCCAATTTT+AGG | - | chr6.3:17258889-17258908 | MS.gene47175:intron | 20.0% |
| !!! | ACTTTTTTAGATACTAGTTT+TGG | - | chr6.3:17257782-17257801 | MS.gene47175:intron | 20.0% |
| !!! | AGATTGTTATTCTGATAATT+TGG | - | chr6.3:17258130-17258149 | MS.gene47175:intron | 20.0% |
| !!! | AGTTTTTTATTTTAGGTTTG+AGG | - | chr6.3:17257725-17257744 | MS.gene47175:intron | 20.0% |
| !!! | ATTGTTATTCTGATAATTTG+GGG | - | chr6.3:17258132-17258151 | MS.gene47175:intron | 20.0% |
| !!! | ATTTTAAGAATTGGAATTGA+GGG | - | chr6.3:17258000-17258019 | MS.gene47175:intron | 20.0% |
| !!! | ATTTTTATCACATATTAGTC+AGG | + | chr6.3:17259148-17259167 | None:intergenic | 20.0% |
| !!! | ATTTTTTGTGATGTTAATCA+TGG | - | chr6.3:17257150-17257169 | MS.gene47175:intron | 20.0% |
| !!! | CTTTTTTAGATACTAGTTTT+GGG | - | chr6.3:17257783-17257802 | MS.gene47175:intron | 20.0% |
| !!! | GATTGTTATTCTGATAATTT+GGG | - | chr6.3:17258131-17258150 | MS.gene47175:intron | 20.0% |
| !!! | GGTTCATATTTTTATGTTTA+TGG | - | chr6.3:17261483-17261502 | MS.gene47175:intron | 20.0% |
| !!! | GGTTTTGTTATTTTAAGATT+TGG | - | chr6.3:17257694-17257713 | MS.gene47175:intron | 20.0% |
| !!! | TAGCTTATATGTTACTTTAA+AGG | - | chr6.3:17260209-17260228 | MS.gene47175:intron | 20.0% |
| !!! | TATTAGAAAAGTATCAACAA+TGG | + | chr6.3:17258768-17258787 | None:intergenic | 20.0% |
| !!! | TATTTTAAGAATTGGAATTG+AGG | - | chr6.3:17257999-17258018 | MS.gene47175:intron | 20.0% |
| !!! | TCTAAAATGAACAATAATTG+TGG | - | chr6.3:17259986-17260005 | MS.gene47175:intron | 20.0% |
| !!! | TGTTAATTTTTGTGCAAATT+TGG | - | chr6.3:17258181-17258200 | MS.gene47175:intron | 20.0% |
| !!! | TGTTTTTGATTTGGAATTAT+GGG | - | chr6.3:17257181-17257200 | MS.gene47175:intron | 20.0% |
| !!! | TTGTTTTTGATTTGGAATTA+TGG | - | chr6.3:17257180-17257199 | MS.gene47175:intron | 20.0% |
| !!! | TTTTAATTACTGTCTATGTT+TGG | - | chr6.3:17260014-17260033 | MS.gene47175:intron | 20.0% |
| !!! | TTTTACTGATTTGTTTGTAT+TGG | - | chr6.3:17259871-17259890 | MS.gene47175:intron | 20.0% |
| !!! | TTTTTGATAACTTGAAATAG+AGG | - | chr6.3:17259256-17259275 | MS.gene47175:intron | 20.0% |
| !!! | TTTTTTGTGATGTTAATCAT+GGG | - | chr6.3:17257151-17257170 | MS.gene47175:intron | 20.0% |
| ! | AACCTAAAATAAAAAACTGC+AGG | + | chr6.3:17257723-17257742 | None:intergenic | 25.0% |
| ! | AATCTATAAGAGAAACTGTT+AGG | - | chr6.3:17257510-17257529 | MS.gene47175:intron | 25.0% |
| ! | AGAAGAATGTTTGTTTATTC+TGG | - | chr6.3:17259476-17259495 | MS.gene47175:intron | 25.0% |
| ! | AGATTTGGAAATTAATGTGT+TGG | - | chr6.3:17257535-17257554 | MS.gene47175:intron | 25.0% |
| ! | ATAAAAAATCACTGTAGCTA+AGG | + | chr6.3:17259827-17259846 | None:intergenic | 25.0% |
| ! | ATAATGATCTCATTATTCTG+AGG | - | chr6.3:17259435-17259454 | MS.gene47175:intron | 25.0% |
| ! | ATGTTCTGTAATATGCATTA+TGG | - | chr6.3:17257672-17257691 | MS.gene47175:intron | 25.0% |
| ! | TAAATTAGCACTTGAAGAAA+TGG | - | chr6.3:17261654-17261673 | MS.gene47175:CDS | 25.0% |
| ! | TACTGCACAAAAAAAATGAT+GGG | + | chr6.3:17260549-17260568 | None:intergenic | 25.0% |
| ! | TAGTTTGGACAAATAACATT+TGG | + | chr6.3:17259174-17259193 | None:intergenic | 25.0% |
| ! | TGTTCTGTAATATGCATTAT+GGG | - | chr6.3:17257673-17257692 | MS.gene47175:intron | 25.0% |
| ! | TTCTATCATTCACCAAATTT+CGG | + | chr6.3:17257562-17257581 | None:intergenic | 25.0% |
| !! | AGAACGTGTGAAATTATTTT+AGG | - | chr6.3:17259112-17259131 | MS.gene47175:CDS | 25.0% |
| !! | ATATTTCTTTTCAGTGTGTA+TGG | - | chr6.3:17259501-17259520 | MS.gene47175:intron | 25.0% |
| !! | GTTTCTCTTATAGATTTTCT+AGG | + | chr6.3:17257506-17257525 | None:intergenic | 25.0% |
| !! | TTGTTATTCTGATAATTTGG+GGG | - | chr6.3:17258133-17258152 | MS.gene47175:intron | 25.0% |
| !!! | AACCTGCAGTTTTTTATTTT+AGG | - | chr6.3:17257718-17257737 | MS.gene47175:intron | 25.0% |
| !!! | ATAAAGTTAGATGGACTAAT+AGG | - | chr6.3:17259073-17259092 | MS.gene47175:CDS | 25.0% |
| !!! | ATTTTTTTTGTGCAGTAGTA+TGG | - | chr6.3:17260552-17260571 | MS.gene47175:intron | 25.0% |
| !!! | GTTTTGTTTCTTTTAGGAAT+TGG | - | chr6.3:17257305-17257324 | MS.gene47175:intron | 25.0% |
| !!! | TAATGGGTTTTGTTTCTTTT+AGG | - | chr6.3:17257299-17257318 | MS.gene47175:intron | 25.0% |
| !!! | TGCAAATTTGGTTGATTTTA+GGG | - | chr6.3:17258193-17258212 | MS.gene47175:intron | 25.0% |
| !!! | TTCATCTGTTTGATTTGTAT+TGG | - | chr6.3:17261415-17261434 | MS.gene47175:intron | 25.0% |
| AAATCAATCGTATCTCTTTC+TGG | + | chr6.3:17258346-17258365 | None:intergenic | 30.0% | |
| AAGTAATAGTTGCAAGCAAA+TGG | + | chr6.3:17258995-17259014 | None:intergenic | 30.0% | |
| ACTGCACAAAAAAAATGATG+GGG | + | chr6.3:17260548-17260567 | None:intergenic | 30.0% | |
| AGAAACTGTTAGGAAAGATT+TGG | - | chr6.3:17257520-17257539 | MS.gene47175:intron | 30.0% | |
| AGAGATTAAGAAAAAACTGC+AGG | - | chr6.3:17260662-17260681 | MS.gene47175:intron | 30.0% | |
| ATAACTTGAAATAGAGGTGA+AGG | - | chr6.3:17259262-17259281 | MS.gene47175:intron | 30.0% | |
| ATTAATTGCTAGTGTTGTAG+TGG | - | chr6.3:17258376-17258395 | MS.gene47175:intron | 30.0% | |
| CACAAAAAATCGACAAAAGA+TGG | + | chr6.3:17257140-17257159 | None:intergenic | 30.0% | |
| CTACTGCACAAAAAAAATGA+TGG | + | chr6.3:17260550-17260569 | None:intergenic | 30.0% | |
| GGTTTCTTGAAACTTGAAAT+AGG | - | chr6.3:17259283-17259302 | MS.gene47175:intron | 30.0% | |
| TAACAAGTAACAACAAACAC+AGG | + | chr6.3:17261146-17261165 | None:intergenic | 30.0% | |
| TAAGAGTGAAAGATTGTGAA+GGG | - | chr6.3:17258418-17258437 | MS.gene47175:intron | 30.0% | |
| TATTTCATATAAGGTGTGCA+TGG | + | chr6.3:17260266-17260285 | None:intergenic | 30.0% | |
| TCAAACAGATGAAACAAATG+TGG | + | chr6.3:17261408-17261427 | None:intergenic | 30.0% | |
| TGGTGAATGATAGAACATTA+TGG | - | chr6.3:17257567-17257586 | MS.gene47175:CDS | 30.0% | |
| TTGTGCAAATGCAGTATATA+TGG | - | chr6.3:17261212-17261231 | MS.gene47175:intron | 30.0% | |
| ! | AGCTAGTGATTTTTGATAGA+TGG | - | chr6.3:17257395-17257414 | MS.gene47175:CDS | 30.0% |
| ! | CAAATAACTACTTTGAGTTC+CGG | - | chr6.3:17260127-17260146 | MS.gene47175:intron | 30.0% |
| ! | CAACTTTTCGAATCAAGTTT+TGG | - | chr6.3:17257106-17257125 | MS.gene47175:intron | 30.0% |
| ! | CGTTTGAGATTTGAATGTAA+GGG | - | chr6.3:17257814-17257833 | MS.gene47175:intron | 30.0% |
| ! | GCTGTGAATCGTTTAAAATT+TGG | + | chr6.3:17258645-17258664 | None:intergenic | 30.0% |
| ! | TAGATTTGAAACTTTGTTGC+AGG | - | chr6.3:17258056-17258075 | MS.gene47175:intron | 30.0% |
| ! | TAGTGATTTTTGATAGATGG+TGG | - | chr6.3:17257398-17257417 | MS.gene47175:CDS | 30.0% |
| ! | TCGTTTGAGATTTGAATGTA+AGG | - | chr6.3:17257813-17257832 | MS.gene47175:intron | 30.0% |
| ! | TCTATCACTGAATGATCTTT+TGG | - | chr6.3:17258472-17258491 | MS.gene47175:intron | 30.0% |
| ! | TTATTTGATGCTTGATAGCA+TGG | + | chr6.3:17260114-17260133 | None:intergenic | 30.0% |
| ! | TTGGATCTTAGTAGTTCTAT+GGG | - | chr6.3:17258560-17258579 | MS.gene47175:intron | 30.0% |
| ! | TTTGGATCTTAGTAGTTCTA+TGG | - | chr6.3:17258559-17258578 | MS.gene47175:intron | 30.0% |
| !! | AGAAAAGTATCAACAATGGA+AGG | + | chr6.3:17258764-17258783 | None:intergenic | 30.0% |
| !! | GTGCAAATTTGGTTGATTTT+AGG | - | chr6.3:17258192-17258211 | MS.gene47175:intron | 30.0% |
| !! | GTTTCTTTTAGGAATTGGAA+TGG | - | chr6.3:17257310-17257329 | MS.gene47175:intron | 30.0% |
| !!! | CTTTTGTTTCAGAGGTATTT+TGG | - | chr6.3:17259894-17259913 | MS.gene47175:intron | 30.0% |
| !!! | GGTTTTGGTTGTTTTTGATT+TGG | - | chr6.3:17257172-17257191 | MS.gene47175:intron | 30.0% |
| AAACTAAGATGACGTGTTAG+AGG | - | chr6.3:17259188-17259207 | MS.gene47175:intron | 35.0% | |
| AAACTTGAATGCATTTCGAC+AGG | + | chr6.3:17261523-17261542 | None:intergenic | 35.0% | |
| AAAGCGACTCTTAATTCTGT+CGG | - | chr6.3:17261462-17261481 | MS.gene47175:intron | 35.0% | |
| AACTTGAATGCATTTCGACA+GGG | + | chr6.3:17261522-17261541 | None:intergenic | 35.0% | |
| AAGAGTGAAAGATTGTGAAG+GGG | - | chr6.3:17258419-17258438 | MS.gene47175:intron | 35.0% | |
| AGGAATTGGAATGGAATCAA+GGG | - | chr6.3:17257319-17257338 | MS.gene47175:intron | 35.0% | |
| AGTAAGGAGAGTAAATCAGA+TGG | - | chr6.3:17257449-17257468 | MS.gene47175:intron | 35.0% | |
| AGTAGCATTAAGTAGAAGCA+GGG | - | chr6.3:17258498-17258517 | MS.gene47175:intron | 35.0% | |
| ATCAAACCGTCAACATGAAA+AGG | - | chr6.3:17261295-17261314 | MS.gene47175:intron | 35.0% | |
| ATCTTGTGAATGTCTTTGCA+GGG | - | chr6.3:17261037-17261056 | MS.gene47175:intron | 35.0% | |
| CTAAGAGTGAAAGATTGTGA+AGG | - | chr6.3:17258417-17258436 | MS.gene47175:intron | 35.0% | |
| CTACTTCAATTACTCCTTGT+CGG | + | chr6.3:17261097-17261116 | None:intergenic | 35.0% | |
| CTGCAAAATTAATCTTGTGC+AGG | - | chr6.3:17261594-17261613 | MS.gene47175:CDS | 35.0% | |
| GACTAATAGGAACCATATAG+TGG | - | chr6.3:17259086-17259105 | MS.gene47175:CDS | 35.0% | |
| GATGCTGCTATAAAGTTAGA+TGG | - | chr6.3:17259064-17259083 | MS.gene47175:intron | 35.0% | |
| GATTGAAAAGTTGAAGCTTG+CGG | - | chr6.3:17261061-17261080 | MS.gene47175:intron | 35.0% | |
| GGTCAAGACTAACAAAATGA+CGG | + | chr6.3:17258325-17258344 | None:intergenic | 35.0% | |
| TAATGTGTTGGACCGAAATT+TGG | - | chr6.3:17257547-17257566 | MS.gene47175:intron | 35.0% | |
| TACACCATCTGTGATTGAAT+TGG | - | chr6.3:17259042-17259061 | MS.gene47175:intron | 35.0% | |
| TAGGAATTGGAATGGAATCA+AGG | - | chr6.3:17257318-17257337 | MS.gene47175:intron | 35.0% | |
| TATATATGGAGTTCATGACG+AGG | - | chr6.3:17261226-17261245 | MS.gene47175:intron | 35.0% | |
| TATCTTGTGAATGTCTTTGC+AGG | - | chr6.3:17261036-17261055 | MS.gene47175:intron | 35.0% | |
| TCCAAAACAAATAAACACGC+AGG | + | chr6.3:17258545-17258564 | None:intergenic | 35.0% | |
| TCTAACACGTCATCTTAGTT+TGG | + | chr6.3:17259189-17259208 | None:intergenic | 35.0% | |
| TTTGTTGCAGGACTGTTATT+GGG | - | chr6.3:17258068-17258087 | MS.gene47175:intron | 35.0% | |
| ! | AAACACTGCTTGATGATTGA+TGG | - | chr6.3:17259348-17259367 | MS.gene47175:intron | 35.0% |
| ! | ACACGTTCTTTTCCACTATA+TGG | + | chr6.3:17259101-17259120 | None:intergenic | 35.0% |
| ! | AGAGAGATTGAGAGTTGATT+TGG | - | chr6.3:17260696-17260715 | MS.gene47175:intron | 35.0% |
| ! | AGCAGTGTTTTACGATTAAC+AGG | + | chr6.3:17259338-17259357 | None:intergenic | 35.0% |
| ! | AGTTCTATGGGATTAGCATA+AGG | - | chr6.3:17258572-17258591 | MS.gene47175:intron | 35.0% |
| ! | ATGCAAGGATGGAATTGTTT+TGG | - | chr6.3:17258096-17258115 | MS.gene47175:intron | 35.0% |
| ! | ATGGTGGAAAATATGCTTAG+GGG | - | chr6.3:17257414-17257433 | MS.gene47175:CDS | 35.0% |
| ! | CTTTTCCTACTATGTGGAAT+CGG | + | chr6.3:17257612-17257631 | None:intergenic | 35.0% |
| ! | GTGATGTTAATCATGGGTTT+TGG | - | chr6.3:17257157-17257176 | MS.gene47175:intron | 35.0% |
| ! | TCCTGCGTGTTTATTTGTTT+TGG | - | chr6.3:17258541-17258560 | MS.gene47175:intron | 35.0% |
| ! | TGGAATTGAGGGTTTTTGTT+TGG | - | chr6.3:17258011-17258030 | MS.gene47175:intron | 35.0% |
| !! | AGATGGTGGAAAATATGCTT+AGG | - | chr6.3:17257412-17257431 | MS.gene47175:CDS | 35.0% |
| !! | GAGTTGATTTGGACTATCTT+TGG | - | chr6.3:17260707-17260726 | MS.gene47175:intron | 35.0% |
| !! | GATGGTGGAAAATATGCTTA+GGG | - | chr6.3:17257413-17257432 | MS.gene47175:CDS | 35.0% |
| !! | GGTAATAAGTGTTGAACAGA+GGG | - | chr6.3:17260618-17260637 | MS.gene47175:intron | 35.0% |
| !! | TGGTAATAAGTGTTGAACAG+AGG | - | chr6.3:17260617-17260636 | MS.gene47175:intron | 35.0% |
| !!! | TGTATTGGCTTTTGTTTCAG+AGG | - | chr6.3:17259886-17259905 | MS.gene47175:intron | 35.0% |
| AACGGCGTGAATTCTTCTAT+TGG | + | chr6.3:17258260-17258279 | None:intergenic | 40.0% | |
| AAGGAGAGTAAATCAGATGG+AGG | - | chr6.3:17257452-17257471 | MS.gene47175:intron | 40.0% | |
| ACCGTCAACATGAAAAGGTA+AGG | - | chr6.3:17261300-17261319 | MS.gene47175:intron | 40.0% | |
| AGGTTTCAAAGTGCACAAGT+AGG | + | chr6.3:17260384-17260403 | None:intergenic | 40.0% | |
| AGTATGACACCACATCCAAA+AGG | + | chr6.3:17259697-17259716 | None:intergenic | 40.0% | |
| ATCAGGAGAGAAAGTAGTGA+CGG | + | chr6.3:17257020-17257039 | None:intergenic | 40.0% | |
| ATTTCGAACTCGAAATGAGC+TGG | - | chr6.3:17261261-17261280 | MS.gene47175:intron | 40.0% | |
| ATTTGACAATCAGCTGCTGA+AGG | - | chr6.3:17260174-17260193 | MS.gene47175:intron | 40.0% | |
| CAACATGAAAAGGTAAGGCA+GGG | - | chr6.3:17261305-17261324 | MS.gene47175:intron | 40.0% | |
| CAAGACTAACAAAATGACGG+AGG | + | chr6.3:17258322-17258341 | None:intergenic | 40.0% | |
| CAGTAGCATTAAGTAGAAGC+AGG | - | chr6.3:17258497-17258516 | MS.gene47175:intron | 40.0% | |
| CCCTTCGAAAATGATGCTTT+CGG | - | chr6.3:17258231-17258250 | MS.gene47175:intron | 40.0% | |
| CCTTCGAAAATGATGCTTTC+GGG | - | chr6.3:17258232-17258251 | MS.gene47175:intron | 40.0% | |
| CGATTCCACATAGTAGGAAA+AGG | - | chr6.3:17257610-17257629 | MS.gene47175:intron | 40.0% | |
| CTTCAAAAGAAGAGCCTCTA+AGG | + | chr6.3:17260404-17260423 | None:intergenic | 40.0% | |
| CTTTGTTGCAGGACTGTTAT+TGG | - | chr6.3:17258067-17258086 | MS.gene47175:intron | 40.0% | |
| GAAAATATGCTTAGGGGGTT+TGG | - | chr6.3:17257420-17257439 | MS.gene47175:CDS | 40.0% | |
| GCATCCAATTCAATCACAGA+TGG | + | chr6.3:17259049-17259068 | None:intergenic | 40.0% | |
| GGAGGATAGTAGATAACTAG+AGG | - | chr6.3:17257470-17257489 | MS.gene47175:intron | 40.0% | |
| GGAGGGTAGTTCAATAAGTA+GGG | - | chr6.3:17260639-17260658 | MS.gene47175:intron | 40.0% | |
| GTACCCTCCATAAAACACAA+TGG | + | chr6.3:17260456-17260475 | None:intergenic | 40.0% | |
| TAAGTAGAAGCAGGGTTCTA+AGG | - | chr6.3:17258506-17258525 | MS.gene47175:intron | 40.0% | |
| TAGTAGATAACTAGAGGCAG+AGG | - | chr6.3:17257476-17257495 | MS.gene47175:intron | 40.0% | |
| TCAACATGAAAAGGTAAGGC+AGG | - | chr6.3:17261304-17261323 | MS.gene47175:intron | 40.0% | |
| TGCTAATTTAGCTGCTGTCT+TGG | + | chr6.3:17261644-17261663 | None:intergenic | 40.0% | |
| TGGTGGAAAATATGCTTAGG+GGG | - | chr6.3:17257415-17257434 | MS.gene47175:CDS | 40.0% | |
| TGTTATTGGGATCAGATGCA+AGG | - | chr6.3:17258081-17258100 | MS.gene47175:intron | 40.0% | |
| TGTTCTATCCTAACACGTGT+CGG | - | chr6.3:17259631-17259650 | MS.gene47175:intron | 40.0% | |
| TTAAGTTCTTGTGTGCACCT+GGG | - | chr6.3:17258702-17258721 | MS.gene47175:intron | 40.0% | |
| TTTCGAACTCGAAATGAGCT+GGG | - | chr6.3:17261262-17261281 | MS.gene47175:intron | 40.0% | |
| TTTGGACATAAGCCATGACA+AGG | - | chr6.3:17260725-17260744 | MS.gene47175:intron | 40.0% | |
| ! | AACAAAGTACCATTCCAGAG+TGG | + | chr6.3:17258288-17258307 | None:intergenic | 40.0% |
| ! | ACTTTGAGTTCCGGTTACAT+GGG | - | chr6.3:17260136-17260155 | MS.gene47175:intron | 40.0% |
| ! | CAATTGAACCTTTTCTCGCT+AGG | + | chr6.3:17260794-17260813 | None:intergenic | 40.0% |
| ! | CTGCCATTGTGTTTTATGGA+GGG | - | chr6.3:17260450-17260469 | MS.gene47175:intron | 40.0% |
| ! | GCCTTACCTTTTCATGTTGA+CGG | + | chr6.3:17261304-17261323 | None:intergenic | 40.0% |
| ! | TAAAGTATCCGACACGTGTT+AGG | + | chr6.3:17259642-17259661 | None:intergenic | 40.0% |
| ! | TAATCTTGCTGCAGACCTTT+TGG | - | chr6.3:17259679-17259698 | MS.gene47175:intron | 40.0% |
| ! | TACTTTGAGTTCCGGTTACA+TGG | - | chr6.3:17260135-17260154 | MS.gene47175:intron | 40.0% |
| ! | TTCCAATTTTAGGCTGTAGC+AGG | - | chr6.3:17258899-17258918 | MS.gene47175:CDS | 40.0% |
| !! | AATAAGTGTTGAACAGAGGG+AGG | - | chr6.3:17260621-17260640 | MS.gene47175:intron | 40.0% |
| !! | ATAAGTGTTGAACAGAGGGA+GGG | - | chr6.3:17260622-17260641 | MS.gene47175:intron | 40.0% |
| !! | TGTGCACTTTGAAACCTTAG+AGG | - | chr6.3:17260387-17260406 | MS.gene47175:CDS | 40.0% |
| !! | TTTGGATGTGGTGTCATACT+AGG | - | chr6.3:17259697-17259716 | MS.gene47175:CDS | 40.0% |
| !!! | AGGTATTTTGGTGCTGCAAT+CGG | - | chr6.3:17259906-17259925 | MS.gene47175:intron | 40.0% |
| !!! | CCGAAAGCATCATTTTCGAA+GGG | + | chr6.3:17258234-17258253 | None:intergenic | 40.0% |
| AACAGAGATCCCCATGTAAC+CGG | + | chr6.3:17260149-17260168 | None:intergenic | 45.0% | |
| ACCTCTGCACATTATACTGG+TGG | - | chr6.3:17259574-17259593 | MS.gene47175:intron | 45.0% | |
| AGATGGACCACAGTTGTACA+TGG | - | chr6.3:17259732-17259751 | MS.gene47175:CDS | 45.0% | |
| ATGCATTTCGACAGGGATTG+TGG | + | chr6.3:17261515-17261534 | None:intergenic | 45.0% | |
| ATGGAAGGCAAATTGTTGCC+AGG | - | chr6.3:17258933-17258952 | MS.gene47175:CDS | 45.0% | |
| ATTGGGATCAGATGCAAGGA+TGG | - | chr6.3:17258085-17258104 | MS.gene47175:intron | 45.0% | |
| CAAAGTGCACAAGTAGGTTG+AGG | + | chr6.3:17260378-17260397 | None:intergenic | 45.0% | |
| CCAAAGCTGTCGACAATAGT+GGG | - | chr6.3:17257068-17257087 | MS.gene47175:intron | 45.0% | |
| CCACATAGTAGGAAAAGGCT+TGG | - | chr6.3:17257615-17257634 | MS.gene47175:intron | 45.0% | |
| CCTGTCGTAGTTAGTTGCTT+CGG | + | chr6.3:17258966-17258985 | None:intergenic | 45.0% | |
| CGTATTCGATCTGGAAAACG+CGG | + | chr6.3:17257045-17257064 | None:intergenic | 45.0% | |
| CTAAGATGACGTGTTAGAGG+TGG | - | chr6.3:17259191-17259210 | MS.gene47175:intron | 45.0% | |
| CTCACATAAGAGACACCAGA+AGG | + | chr6.3:17259763-17259782 | None:intergenic | 45.0% | |
| GCAAGTTCCTTGACAGGAAT+TGG | + | chr6.3:17259531-17259550 | None:intergenic | 45.0% | |
| GGGAGGGTAGTTCAATAAGT+AGG | - | chr6.3:17260638-17260657 | MS.gene47175:intron | 45.0% | |
| GTCACTACTTTCTCTCCTGA+TGG | - | chr6.3:17257019-17257038 | MS.gene47175:CDS | 45.0% | |
| GTCCTGCTACAGCCTAAAAT+TGG | + | chr6.3:17258904-17258923 | None:intergenic | 45.0% | |
| GTTAAGTTCTTGTGTGCACC+TGG | - | chr6.3:17258701-17258720 | MS.gene47175:intron | 45.0% | |
| TAAGCCATGACAAGGAACCA+TGG | - | chr6.3:17260733-17260752 | MS.gene47175:intron | 45.0% | |
| TAAGTTCTTGTGTGCACCTG+GGG | - | chr6.3:17258703-17258722 | MS.gene47175:intron | 45.0% | |
| TAATCTTGTGCAGGTTCCAG+AGG | - | chr6.3:17261603-17261622 | MS.gene47175:CDS | 45.0% | |
| TGCACCTCTGCACATTATAC+TGG | - | chr6.3:17259571-17259590 | MS.gene47175:intron | 45.0% | |
| TGGAAGGCAAATTGTTGCCA+GGG | - | chr6.3:17258934-17258953 | MS.gene47175:CDS | 45.0% | |
| TGGTGATCCAATTCCTGTCA+AGG | - | chr6.3:17259521-17259540 | MS.gene47175:intron | 45.0% | |
| TTCAATTACTCCTTGTCGGC+AGG | + | chr6.3:17261093-17261112 | None:intergenic | 45.0% | |
| TTGTACATGGTCGAACCTTC+TGG | - | chr6.3:17259745-17259764 | MS.gene47175:intron | 45.0% | |
| ! | AACATGGACTGTACCAGAGA+AGG | + | chr6.3:17260330-17260349 | None:intergenic | 45.0% |
| ! | ACATGGACTGTACCAGAGAA+GGG | + | chr6.3:17260329-17260348 | None:intergenic | 45.0% |
| ! | CCAAGCCTTTTCCTACTATG+TGG | + | chr6.3:17257618-17257637 | None:intergenic | 45.0% |
| ! | CTTTGAGTTCCGGTTACATG+GGG | - | chr6.3:17260137-17260156 | MS.gene47175:intron | 45.0% |
| ! | GCTGCCATTGTGTTTTATGG+AGG | - | chr6.3:17260449-17260468 | MS.gene47175:intron | 45.0% |
| ! | GCTGCTGCCATTGTGTTTTA+TGG | - | chr6.3:17260446-17260465 | MS.gene47175:intron | 45.0% |
| ! | GTAGGAAAAGGCTTGGTTGT+TGG | - | chr6.3:17257622-17257641 | MS.gene47175:intron | 45.0% |
| ! | TAGGTTGAGGCATGAGCAAA+GGG | + | chr6.3:17260365-17260384 | None:intergenic | 45.0% |
| ! | TGTAGCCGATTCCACATAGT+AGG | - | chr6.3:17257604-17257623 | MS.gene47175:intron | 45.0% |
| !! | TGCAAGTTTTGTCCCGTATG+AGG | - | chr6.3:17260424-17260443 | MS.gene47175:CDS | 45.0% |
| !!! | CCCGAAAGCATCATTTTCGA+AGG | + | chr6.3:17258235-17258254 | None:intergenic | 45.0% |
| !!! | GGTATTTTGGTGCTGCAATC+GGG | - | chr6.3:17259907-17259926 | MS.gene47175:intron | 45.0% |
| !!! | ATTTTTTTAGATATTAATAA+TGG | - | chr6.3:17257282-17257301 | MS.gene47175:intron | 5.0% |
| !!! | TTTTTTTAGATATTAATAAT+GGG | - | chr6.3:17257283-17257302 | MS.gene47175:intron | 5.0% |
| ACAATGGCAGCAGCCTCATA+CGG | + | chr6.3:17260440-17260459 | None:intergenic | 50.0% | |
| ACAGGCTGCGAAAACGTAAG+TGG | - | chr6.3:17259938-17259957 | MS.gene47175:intron | 50.0% | |
| AGGGGGGGTAGAAGAAAACA+TGG | + | chr6.3:17260346-17260365 | None:intergenic | 50.0% | |
| AGGTTGAGGCATGAGCAAAG+GGG | + | chr6.3:17260364-17260383 | None:intergenic | 50.0% | |
| CATTCCAGAGTGGCGATGAA+CGG | + | chr6.3:17258278-17258297 | None:intergenic | 50.0% | |
| CCATGGCGTCGTTTGGTAAA+TGG | - | chr6.3:17260750-17260769 | MS.gene47175:intron | 50.0% | |
| CCATTTACCAAACGACGCCA+TGG | + | chr6.3:17260753-17260772 | None:intergenic | 50.0% | |
| CCCACTATTGTCGACAGCTT+TGG | + | chr6.3:17257071-17257090 | None:intergenic | 50.0% | |
| CCGAAGCAACTAACTACGAC+AGG | - | chr6.3:17258963-17258982 | MS.gene47175:intron | 50.0% | |
| CGATCAGCAAGTTCCTTGAC+AGG | + | chr6.3:17259537-17259556 | None:intergenic | 50.0% | |
| CTAGGTGGTTACGACAGAGA+TGG | - | chr6.3:17259715-17259734 | MS.gene47175:CDS | 50.0% | |
| CTTTGGCAGCGTATTCGATC+TGG | + | chr6.3:17257054-17257073 | None:intergenic | 50.0% | |
| GCACATTATACTGGTGGCTC+AGG | - | chr6.3:17259580-17259599 | MS.gene47175:intron | 50.0% | |
| GCCAAAGCTGTCGACAATAG+TGG | - | chr6.3:17257067-17257086 | MS.gene47175:intron | 50.0% | |
| GCCACCAGTATAATGTGCAG+AGG | + | chr6.3:17259578-17259597 | None:intergenic | 50.0% | |
| GGGGGTTTGGACATGTAGTA+AGG | - | chr6.3:17257433-17257452 | MS.gene47175:intron | 50.0% | |
| GGTTCGACCATGTACAACTG+TGG | + | chr6.3:17259742-17259761 | None:intergenic | 50.0% | |
| TGATCCTGCCTAGCGAGAAA+AGG | - | chr6.3:17260783-17260802 | MS.gene47175:intron | 50.0% | |
| TGGAGTTCATGACGAGGCAA+AGG | - | chr6.3:17261232-17261251 | MS.gene47175:intron | 50.0% | |
| ! | GCTTCTTCTAGAAGCTCCTC+TGG | + | chr6.3:17261622-17261641 | None:intergenic | 50.0% |
| ! | GTAGGTTGAGGCATGAGCAA+AGG | + | chr6.3:17260366-17260385 | None:intergenic | 50.0% |
| ! | TGAACCTTTTCTCGCTAGGC+AGG | + | chr6.3:17260790-17260809 | None:intergenic | 50.0% |
| ! | TGCTGCAGACCTTTTGGATG+TGG | - | chr6.3:17259685-17259704 | MS.gene47175:intron | 50.0% |
| !! | AGCTGTCGACAATAGTGGGT+AGG | - | chr6.3:17257072-17257091 | MS.gene47175:intron | 50.0% |
| !! | GCTGTCGACAATAGTGGGTA+GGG | - | chr6.3:17257073-17257092 | MS.gene47175:intron | 50.0% |
| !! | GGATGTGGTGTCATACTAGG+TGG | - | chr6.3:17259700-17259719 | MS.gene47175:CDS | 50.0% |
| !! | TTTGGTGCTGCAATCGGGAA+GGG | - | chr6.3:17259912-17259931 | MS.gene47175:intron | 50.0% |
| !!! | TTTTGGTGCTGCAATCGGGA+AGG | - | chr6.3:17259911-17259930 | MS.gene47175:intron | 50.0% |
| ACTGTACCAGAGAAGGGCTG+AGG | + | chr6.3:17260323-17260342 | None:intergenic | 55.0% | |
| AGTTGCTTCGGACTTAGCCC+TGG | + | chr6.3:17258954-17258973 | None:intergenic | 55.0% | |
| ATCTGGAAAACGCGGCCATC+AGG | + | chr6.3:17257037-17257056 | None:intergenic | 55.0% | |
| CAAGGAACCATGGCGTCGTT+TGG | - | chr6.3:17260743-17260762 | MS.gene47175:intron | 55.0% | |
| CAATGGCAGCAGCCTCATAC+GGG | + | chr6.3:17260439-17260458 | None:intergenic | 55.0% | |
| GACGCCATGGTTCCTTGTCA+TGG | + | chr6.3:17260740-17260759 | None:intergenic | 55.0% | |
| GGTTGAGGCATGAGCAAAGG+GGG | + | chr6.3:17260363-17260382 | None:intergenic | 55.0% | |
| GTTGAGGCATGAGCAAAGGG+GGG | + | chr6.3:17260362-17260381 | None:intergenic | 55.0% | |
| TGTGTTCCTCAGCCCTTCTC+TGG | - | chr6.3:17260314-17260333 | MS.gene47175:intron | 55.0% | |
| TTGAGGCATGAGCAAAGGGG+GGG | + | chr6.3:17260361-17260380 | None:intergenic | 55.0% | |
| ! | CGTTCATCGCCACTCTGGAA+TGG | - | chr6.3:17258276-17258295 | MS.gene47175:intron | 55.0% |
| ! | TGTGCAGAGGTGCACGTAAC+TGG | + | chr6.3:17259565-17259584 | None:intergenic | 55.0% |
| !! | CAAGGAACTTGCTGATCGCG+TGG | - | chr6.3:17259539-17259558 | MS.gene47175:intron | 55.0% |
| !! | CAGGACTAGCTGCAGATGGA+AGG | - | chr6.3:17258918-17258937 | MS.gene47175:CDS | 55.0% |
| !! | GTAGCAGGACTAGCTGCAGA+TGG | - | chr6.3:17258914-17258933 | MS.gene47175:CDS | 55.0% |
| GCGGATATGACCTGCCGACA+AGG | - | chr6.3:17261080-17261099 | MS.gene47175:intron | 60.0% | |
| GCTGCTTAGTGCATTGCCCC+AGG | + | chr6.3:17258722-17258741 | None:intergenic | 60.0% | |
| TGCAATCGGGAAGGGCAGAC+AGG | - | chr6.3:17259920-17259939 | MS.gene47175:intron | 60.0% | |
| CACGCCGTTCATCGCCACTC+TGG | - | chr6.3:17258271-17258290 | MS.gene47175:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 17256986 | 17261687 | 17256986 | ID=MS.gene47175 |
| chr6.3 | mRNA | 17256986 | 17261687 | 17256986 | ID=MS.gene47175.t1;Parent=MS.gene47175 |
| chr6.3 | exon | 17261584 | 17261687 | 17261584 | ID=MS.gene47175.t1.exon1;Parent=MS.gene47175.t1 |
| chr6.3 | CDS | 17261584 | 17261687 | 17261584 | ID=cds.MS.gene47175.t1;Parent=MS.gene47175.t1 |
| chr6.3 | exon | 17260556 | 17260595 | 17260556 | ID=MS.gene47175.t1.exon2;Parent=MS.gene47175.t1 |
| chr6.3 | CDS | 17260556 | 17260595 | 17260556 | ID=cds.MS.gene47175.t1;Parent=MS.gene47175.t1 |
| chr6.3 | exon | 17260376 | 17260459 | 17260376 | ID=MS.gene47175.t1.exon3;Parent=MS.gene47175.t1 |
| chr6.3 | CDS | 17260376 | 17260459 | 17260376 | ID=cds.MS.gene47175.t1;Parent=MS.gene47175.t1 |
| chr6.3 | exon | 17259689 | 17259762 | 17259689 | ID=MS.gene47175.t1.exon4;Parent=MS.gene47175.t1 |
| chr6.3 | CDS | 17259689 | 17259762 | 17259689 | ID=cds.MS.gene47175.t1;Parent=MS.gene47175.t1 |
| chr6.3 | exon | 17259072 | 17259158 | 17259072 | ID=MS.gene47175.t1.exon5;Parent=MS.gene47175.t1 |
| chr6.3 | CDS | 17259072 | 17259158 | 17259072 | ID=cds.MS.gene47175.t1;Parent=MS.gene47175.t1 |
| chr6.3 | exon | 17258896 | 17258980 | 17258896 | ID=MS.gene47175.t1.exon6;Parent=MS.gene47175.t1 |
| chr6.3 | CDS | 17258896 | 17258980 | 17258896 | ID=cds.MS.gene47175.t1;Parent=MS.gene47175.t1 |
| chr6.3 | exon | 17258721 | 17258767 | 17258721 | ID=MS.gene47175.t1.exon7;Parent=MS.gene47175.t1 |
| chr6.3 | CDS | 17258721 | 17258767 | 17258721 | ID=cds.MS.gene47175.t1;Parent=MS.gene47175.t1 |
| chr6.3 | exon | 17257550 | 17257615 | 17257550 | ID=MS.gene47175.t1.exon8;Parent=MS.gene47175.t1 |
| chr6.3 | CDS | 17257550 | 17257615 | 17257550 | ID=cds.MS.gene47175.t1;Parent=MS.gene47175.t1 |
| chr6.3 | exon | 17257357 | 17257447 | 17257357 | ID=MS.gene47175.t1.exon9;Parent=MS.gene47175.t1 |
| chr6.3 | CDS | 17257357 | 17257447 | 17257357 | ID=cds.MS.gene47175.t1;Parent=MS.gene47175.t1 |
| chr6.3 | exon | 17256986 | 17257057 | 17256986 | ID=MS.gene47175.t1.exon10;Parent=MS.gene47175.t1 |
| chr6.3 | CDS | 17256986 | 17257057 | 17256986 | ID=cds.MS.gene47175.t1;Parent=MS.gene47175.t1 |
| Gene Sequence |
| Protein sequence |
