Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074061.t1 | XP_013451443.1 | 100 | 249 | 0 | 0 | 1 | 249 | 1 | 249 | 2.90E-138 | 501.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074061.t1 | O24362 | 88.8 | 249 | 28 | 0 | 1 | 249 | 1 | 249 | 6.8e-128 | 458.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074061.t1 | A0A072U8Q5 | 100.0 | 249 | 0 | 0 | 1 | 249 | 1 | 249 | 2.1e-138 | 501.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050838 | MS.gene074061 | 0.806642 | 7.45E-50 | -1.69E-46 |
| MS.gene050945 | MS.gene074061 | 0.800186 | 1.62E-48 | -1.69E-46 |
| MS.gene051233 | MS.gene074061 | 0.803901 | 2.79E-49 | -1.69E-46 |
| MS.gene051234 | MS.gene074061 | 0.803115 | 4.07E-49 | -1.69E-46 |
| MS.gene058074 | MS.gene074061 | 0.811225 | 7.79E-51 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074061.t1 | MTR_6g024135 | 100.000 | 249 | 0 | 0 | 1 | 249 | 1 | 249 | 0.0 | 514 |
| MS.gene074061.t1 | MTR_0167s0060 | 36.612 | 183 | 116 | 0 | 8 | 190 | 6 | 188 | 4.64e-39 | 135 |
| MS.gene074061.t1 | MTR_1g022410 | 40.838 | 191 | 108 | 3 | 8 | 196 | 6 | 193 | 1.19e-38 | 136 |
| MS.gene074061.t1 | MTR_1g112250 | 34.783 | 207 | 120 | 2 | 6 | 203 | 6 | 206 | 4.45e-38 | 133 |
| MS.gene074061.t1 | MTR_7g070070 | 35.071 | 211 | 135 | 2 | 8 | 216 | 5 | 215 | 9.53e-38 | 133 |
| MS.gene074061.t1 | MTR_5g016590 | 35.071 | 211 | 135 | 2 | 8 | 216 | 5 | 215 | 2.10e-37 | 132 |
| MS.gene074061.t1 | MTR_8g464460 | 36.932 | 176 | 109 | 2 | 5 | 178 | 6 | 181 | 2.56e-32 | 119 |
| MS.gene074061.t1 | MTR_2g060830 | 35.227 | 176 | 112 | 2 | 5 | 178 | 6 | 181 | 3.03e-32 | 118 |
| MS.gene074061.t1 | MTR_8g075320 | 35.260 | 173 | 110 | 1 | 8 | 178 | 4 | 176 | 1.62e-29 | 111 |
| MS.gene074061.t1 | MTR_2g016050 | 35.260 | 173 | 110 | 1 | 8 | 178 | 4 | 176 | 4.98e-28 | 107 |
| MS.gene074061.t1 | MTR_4g012740 | 28.696 | 230 | 119 | 6 | 8 | 196 | 237 | 462 | 1.53e-17 | 82.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074061.t1 | AT2G27020 | 86.747 | 249 | 33 | 0 | 1 | 249 | 1 | 249 | 5.30e-168 | 464 |
| MS.gene074061.t1 | AT2G27020 | 86.747 | 249 | 33 | 0 | 1 | 249 | 103 | 351 | 1.22e-166 | 464 |
| MS.gene074061.t1 | AT1G47250 | 42.105 | 171 | 97 | 1 | 8 | 178 | 6 | 174 | 6.85e-39 | 136 |
| MS.gene074061.t1 | AT1G16470 | 34.146 | 205 | 134 | 1 | 8 | 211 | 6 | 210 | 6.85e-39 | 135 |
| MS.gene074061.t1 | AT1G16470 | 34.146 | 205 | 134 | 1 | 8 | 211 | 6 | 210 | 6.85e-39 | 135 |
| MS.gene074061.t1 | AT1G79210 | 34.146 | 205 | 134 | 1 | 8 | 211 | 6 | 210 | 8.05e-39 | 135 |
| MS.gene074061.t1 | AT1G79210 | 34.146 | 205 | 134 | 1 | 8 | 211 | 6 | 210 | 8.05e-39 | 135 |
| MS.gene074061.t1 | AT1G79210 | 34.146 | 205 | 134 | 1 | 8 | 211 | 6 | 210 | 8.05e-39 | 135 |
| MS.gene074061.t1 | AT5G42790 | 42.105 | 171 | 97 | 1 | 8 | 178 | 6 | 174 | 1.13e-38 | 136 |
| MS.gene074061.t1 | AT3G14290 | 34.783 | 207 | 120 | 2 | 6 | 203 | 6 | 206 | 3.60e-38 | 134 |
| MS.gene074061.t1 | AT1G53850 | 34.300 | 207 | 121 | 2 | 6 | 203 | 6 | 206 | 9.44e-38 | 132 |
| MS.gene074061.t1 | AT1G53850 | 34.300 | 207 | 121 | 2 | 6 | 203 | 6 | 206 | 9.44e-38 | 132 |
| MS.gene074061.t1 | AT3G22110 | 34.783 | 230 | 143 | 5 | 8 | 231 | 5 | 233 | 2.50e-37 | 132 |
| MS.gene074061.t1 | AT5G35590 | 34.659 | 176 | 113 | 2 | 5 | 178 | 6 | 181 | 1.75e-32 | 119 |
| MS.gene074061.t1 | AT2G05840 | 35.795 | 176 | 111 | 2 | 5 | 178 | 6 | 181 | 1.35e-31 | 116 |
| MS.gene074061.t1 | AT2G05840 | 35.795 | 176 | 111 | 2 | 5 | 178 | 6 | 181 | 1.99e-31 | 116 |
| MS.gene074061.t1 | AT2G05840 | 35.795 | 176 | 111 | 2 | 5 | 178 | 6 | 181 | 2.26e-31 | 115 |
| MS.gene074061.t1 | AT5G66140 | 34.104 | 173 | 112 | 1 | 8 | 178 | 4 | 176 | 1.33e-28 | 109 |
| MS.gene074061.t1 | AT3G51260 | 34.104 | 173 | 112 | 1 | 8 | 178 | 4 | 176 | 1.59e-28 | 108 |
| MS.gene074061.t1 | AT3G51260 | 34.104 | 173 | 112 | 1 | 8 | 178 | 4 | 176 | 2.70e-28 | 108 |
| MS.gene074061.t1 | AT4G15165 | 30.144 | 209 | 102 | 5 | 8 | 214 | 5 | 171 | 2.32e-20 | 86.3 |
Find 60 sgRNAs with CRISPR-Local
Find 296 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTGTTGCAGGACTGTTAT+TGG | 0.185948 | 6.1:-7532929 | MS.gene074061:intron |
| CCTTCGAAAATGATGCTTTC+GGG | 0.215701 | 6.1:-7532764 | MS.gene074061:CDS |
| TGCTAATTTAGCTGCTGTTT+TGG | 0.291877 | 6.1:+7529032 | None:intergenic |
| TAATGGTGCTGCAGACCTTT+TGG | 0.315162 | 6.1:-7530912 | MS.gene074061:intron |
| ATGCAAGGATGGAATTGTTT+TGG | 0.316941 | 6.1:-7532900 | MS.gene074061:intron |
| CCCTTCGAAAATGATGCTTT+CGG | 0.324696 | 6.1:-7532765 | MS.gene074061:CDS |
| TTGTACATGGTCGAGCCTTC+TGG | 0.359436 | 6.1:-7530846 | MS.gene074061:CDS |
| TTTGTTGCAGGACTGTTATT+GGG | 0.360861 | 6.1:-7532928 | MS.gene074061:intron |
| GCCAAAGCTGTCGACAATAG+TGG | 0.361107 | 6.1:-7533919 | MS.gene074061:CDS |
| ATCTGGAAAACGCGACCATC+AGG | 0.383550 | 6.1:+7533952 | None:intergenic |
| AACGGCGTGAATTCTTCTAT+TGG | 0.385310 | 6.1:+7532739 | None:intergenic |
| TGCACCTCTGCACATTATAC+TGG | 0.388962 | 6.1:-7531020 | MS.gene074061:CDS |
| CTTTGGCAGCGTATTCGATC+TGG | 0.397223 | 6.1:+7533935 | None:intergenic |
| TTGTGCAAATGCAGTATATA+TGG | 0.408846 | 6.1:-7529491 | MS.gene074061:intron |
| GCAAGTTCCTTGACAGGAAT+AGG | 0.410348 | 6.1:+7531063 | None:intergenic |
| GCTTCTTCTAGAAGCTCCTC+TGG | 0.410463 | 6.1:+7529054 | None:intergenic |
| TAAATTAGCACTCGAAGAAA+TGG | 0.411568 | 6.1:-7529019 | MS.gene074061:CDS |
| CCCACTATTGTCGACAGCTT+TGG | 0.424001 | 6.1:+7533918 | None:intergenic |
| TTTGGATGTGGTGTCATACT+AGG | 0.432245 | 6.1:-7530894 | MS.gene074061:CDS |
| TTTCAATTCTAGGCTGTAGC+AGG | 0.453786 | 6.1:-7531997 | MS.gene074061:intron |
| TTCAATAACACCTTGTCGGC+AGG | 0.462897 | 6.1:+7529609 | None:intergenic |
| CACGCCGTTCATCGCCACTC+TGG | 0.470804 | 6.1:-7532725 | MS.gene074061:CDS |
| CTACTTCAATAACACCTTGT+CGG | 0.474090 | 6.1:+7529605 | None:intergenic |
| ATTTCGAACTCGAAATGAGC+TGG | 0.484940 | 6.1:-7529442 | MS.gene074061:CDS |
| ATCATGAGTAGCATTGGAAC+AGG | 0.485653 | 6.1:-7534003 | MS.gene074061:CDS |
| ATCAAACCGTCAACATGAAA+AGG | 0.490739 | 6.1:-7529408 | MS.gene074061:intron |
| TCAGCAATCATGAGTAGCAT+TGG | 0.498196 | 6.1:-7534009 | None:intergenic |
| CTGAAGCAACTAACTACGAC+AGG | 0.504390 | 6.1:-7531933 | MS.gene074061:intron |
| TGCAATCGGGAAGGGCAGAC+AGG | 0.508389 | 6.1:-7530676 | MS.gene074061:CDS |
| ATGGAAGGCAAATTGTTGCT+AGG | 0.523096 | 6.1:-7531963 | MS.gene074061:CDS |
| CGATCAGCAAGTTCCTTGAC+AGG | 0.525955 | 6.1:+7531057 | None:intergenic |
| GTCACTACTTTCTCTCCTGA+TGG | 0.533196 | 6.1:-7533967 | MS.gene074061:CDS |
| GCACATTATACTGGTGGCTC+AGG | 0.538022 | 6.1:-7531011 | MS.gene074061:intron |
| TGGAAGGCAAATTGTTGCTA+GGG | 0.549013 | 6.1:-7531962 | MS.gene074061:CDS |
| CAGGATTAGCTGCAGATGGA+AGG | 0.556190 | 6.1:-7531978 | MS.gene074061:CDS |
| AGTATGACACCACATCCAAA+AGG | 0.565132 | 6.1:+7530897 | None:intergenic |
| CCAAAGCTGTCGACAATAGT+GGG | 0.566060 | 6.1:-7533918 | MS.gene074061:intron |
| TTTGGTGCTGCAATCGGGAA+GGG | 0.566694 | 6.1:-7530684 | MS.gene074061:CDS |
| CGGTGATCCTATTCCTGTCA+AGG | 0.577799 | 6.1:-7531070 | MS.gene074061:CDS |
| TGGAGTTCATGACGAGGCAA+AGG | 0.579021 | 6.1:-7529471 | MS.gene074061:CDS |
| CGTTCATCGCCACTCTGGAA+TGG | 0.579273 | 6.1:-7532720 | MS.gene074061:intron |
| CATTCCAGAGTGGCGATGAA+CGG | 0.580559 | 6.1:+7532721 | None:intergenic |
| GTAGCAGGATTAGCTGCAGA+TGG | 0.580997 | 6.1:-7531982 | MS.gene074061:CDS |
| GATTGAAAAGTTGAAGCTTG+CGG | 0.589401 | 6.1:-7529638 | MS.gene074061:CDS |
| ACCTCTGCACATTATACTGG+TGG | 0.589474 | 6.1:-7531017 | MS.gene074061:CDS |
| GCGGATATGACCTGCCGACA+AGG | 0.596010 | 6.1:-7529619 | MS.gene074061:CDS |
| ATTGGGATCAGATGCAAGGA+TGG | 0.596379 | 6.1:-7532911 | MS.gene074061:CDS |
| TAATCTTGTGCAGGTTCCAG+AGG | 0.597205 | 6.1:-7529070 | MS.gene074061:intron |
| TTTCGAACTCGAAATGAGCT+GGG | 0.612900 | 6.1:-7529441 | MS.gene074061:CDS |
| ATCAGGAGAGAAAGTAGTGA+CGG | 0.617907 | 6.1:+7533969 | None:intergenic |
| GGCTCGACCATGTACAATTG+TGG | 0.619168 | 6.1:+7530852 | None:intergenic |
| AGATGGACCACAATTGTACA+TGG | 0.629708 | 6.1:-7530859 | MS.gene074061:CDS |
| CTAGGTGGTTACGACAGAGA+TGG | 0.638286 | 6.1:-7530876 | MS.gene074061:CDS |
| TGTTATTGGGATCAGATGCA+AGG | 0.646757 | 6.1:-7532915 | MS.gene074061:CDS |
| CAAGGAACTTGCTGATCGTG+TGG | 0.647625 | 6.1:-7531052 | MS.gene074061:CDS |
| GGATGTGGTGTCATACTAGG+TGG | 0.653371 | 6.1:-7530891 | MS.gene074061:CDS |
| GCCACCAGTATAATGTGCAG+AGG | 0.679994 | 6.1:+7531016 | None:intergenic |
| CTTACATAGGAGACACCAGA+AGG | 0.684192 | 6.1:+7530831 | None:intergenic |
| AACAAAGTACCATTCCAGAG+TGG | 0.731365 | 6.1:+7532711 | None:intergenic |
| TATATATGGAGTTCATGACG+AGG | 0.744573 | 6.1:-7529477 | MS.gene074061:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTAAATTATTAATTAA+AGG | - | chr6.1:7529937-7529956 | MS.gene074061:intron | 0.0% |
| !! | AAAAAAATCAAAAATTAAAC+AGG | + | chr6.1:7530174-7530193 | None:intergenic | 10.0% |
| !! | CAATAATAAGTAATAAAAAA+GGG | + | chr6.1:7531511-7531530 | None:intergenic | 10.0% |
| !! | GTATTTAATTAACAAAAAAA+AGG | + | chr6.1:7533251-7533270 | None:intergenic | 10.0% |
| !! | TTGATAAATATAAAAAATAC+TGG | - | chr6.1:7532943-7532962 | MS.gene074061:intron | 10.0% |
| !!! | TTCTTTTAATTACTTATATA+TGG | - | chr6.1:7533668-7533687 | MS.gene074061:intron | 10.0% |
| !! | ATAAAATAATGTACATGTTT+AGG | + | chr6.1:7531152-7531171 | None:intergenic | 15.0% |
| !! | GCAATAATAAGTAATAAAAA+AGG | + | chr6.1:7531512-7531531 | None:intergenic | 15.0% |
| !! | TAATAAGTATCTTACATATA+AGG | + | chr6.1:7532629-7532648 | None:intergenic | 15.0% |
| !!! | ATTTTAAGAATTGGAATTAA+GGG | - | chr6.1:7529968-7529987 | MS.gene074061:intron | 15.0% |
| !!! | GCAATTGAATTTTTATTTTT+AGG | - | chr6.1:7529234-7529253 | MS.gene074061:intron | 15.0% |
| !!! | GTAGTTTTTATTTTAAGAAT+TGG | - | chr6.1:7530003-7530022 | MS.gene074061:intron | 15.0% |
| !!! | GTTTTAGTTATTTTAAGAAT+TGG | - | chr6.1:7529959-7529978 | MS.gene074061:intron | 15.0% |
| !!! | TATTAATAACCGATTTATAA+TGG | - | chr6.1:7532079-7532098 | MS.gene074061:intron | 15.0% |
| !!! | TATTTTAAGAATTGGAATTA+AGG | - | chr6.1:7529967-7529986 | MS.gene074061:intron | 15.0% |
| !!! | TGAAATGTAGTTTTATTTTA+AGG | - | chr6.1:7529855-7529874 | MS.gene074061:intron | 15.0% |
| !!! | TTAAGTTATTTTCAACTATA+TGG | + | chr6.1:7531251-7531270 | None:intergenic | 15.0% |
| !!! | TTTATTTTAAGGTTTTTGTT+TGG | - | chr6.1:7529866-7529885 | MS.gene074061:intron | 15.0% |
| !! | ATATTATTTACAGAAAGCAA+AGG | + | chr6.1:7532465-7532484 | None:intergenic | 20.0% |
| !! | ATGTAAGATACTTATTAGAA+TGG | - | chr6.1:7532632-7532651 | MS.gene074061:intron | 20.0% |
| !! | GAAATAATGTAAACTTACAT+AGG | + | chr6.1:7532193-7532212 | None:intergenic | 20.0% |
| !! | GTTATTATATTATTGTTCAG+TGG | - | chr6.1:7533212-7533231 | MS.gene074061:intron | 20.0% |
| !! | TAAAATACAAATAAACACAC+TGG | + | chr6.1:7530605-7530624 | None:intergenic | 20.0% |
| !! | TAACATAGACAGTAATTAAA+AGG | + | chr6.1:7532411-7532430 | None:intergenic | 20.0% |
| !! | TGTAAAACAAAATTCTGATA+TGG | + | chr6.1:7533321-7533340 | None:intergenic | 20.0% |
| !! | TTAACTGCGTTATATTATAT+TGG | + | chr6.1:7530792-7530811 | None:intergenic | 20.0% |
| !! | TTTAATTACTGTCTATGTTA+GGG | - | chr6.1:7532411-7532430 | MS.gene074061:intron | 20.0% |
| !!! | AAACTTAAAACGCAATATTT+TGG | - | chr6.1:7532823-7532842 | MS.gene074061:intron | 20.0% |
| !!! | AATTTGATAACTTGAAATAG+AGG | - | chr6.1:7531634-7531653 | MS.gene074061:intron | 20.0% |
| !!! | ACTTTTTTAGATACTAGTTT+TGG | - | chr6.1:7529794-7529813 | MS.gene074061:intron | 20.0% |
| !!! | AGAACATGTCAAATTATTTT+AGG | - | chr6.1:7531443-7531462 | MS.gene074061:intron | 20.0% |
| !!! | AGATTGTTATTCTGATAATT+TGG | - | chr6.1:7530142-7530161 | MS.gene074061:intron | 20.0% |
| !!! | AGTTTTTTATTTTAGGTTTG+AGG | - | chr6.1:7529737-7529756 | MS.gene074061:intron | 20.0% |
| !!! | ATAATCTTTAGAGTTAAAAG+GGG | + | chr6.1:7531480-7531499 | None:intergenic | 20.0% |
| !!! | ATTGTTATTCTGATAATTTG+GGG | - | chr6.1:7530144-7530163 | MS.gene074061:intron | 20.0% |
| !!! | ATTTTAAGAATTGGAATTGA+GGG | - | chr6.1:7530012-7530031 | MS.gene074061:intron | 20.0% |
| !!! | ATTTTTTGTGATGTTAATCA+TGG | - | chr6.1:7529172-7529191 | MS.gene074061:intron | 20.0% |
| !!! | CTTTTTTAGATACTAGTTTT+GGG | - | chr6.1:7529795-7529814 | MS.gene074061:intron | 20.0% |
| !!! | GATAATCTTTAGAGTTAAAA+GGG | + | chr6.1:7531481-7531500 | None:intergenic | 20.0% |
| !!! | GATTGTTATTCTGATAATTT+GGG | - | chr6.1:7530143-7530162 | MS.gene074061:intron | 20.0% |
| !!! | GGTTCATATTTTTATGTTTA+TGG | - | chr6.1:7533818-7533837 | MS.gene074061:intron | 20.0% |
| !!! | GGTTTTGTTATTTTAAGATT+TGG | - | chr6.1:7529706-7529725 | MS.gene074061:intron | 20.0% |
| !!! | GTTTTTGGATTTTGAATTAT+GGG | - | chr6.1:7529204-7529223 | MS.gene074061:intron | 20.0% |
| !!! | GTTTTTTATTTTAGGTTTGA+GGG | - | chr6.1:7529738-7529757 | MS.gene074061:intron | 20.0% |
| !!! | TATTTTAAGAATTGGAATTG+AGG | - | chr6.1:7530011-7530030 | MS.gene074061:intron | 20.0% |
| !!! | TGATAATCTTTAGAGTTAAA+AGG | + | chr6.1:7531482-7531501 | None:intergenic | 20.0% |
| !!! | TGTTAATTTTTGTGCAAATT+TGG | - | chr6.1:7530193-7530212 | MS.gene074061:intron | 20.0% |
| !!! | TGTTTATTTGTATTTTACCT+TGG | - | chr6.1:7530608-7530627 | MS.gene074061:intron | 20.0% |
| !!! | TGTTTTTGGATTTTGAATTA+TGG | - | chr6.1:7529203-7529222 | MS.gene074061:intron | 20.0% |
| !!! | TTTTAATTACTGTCTATGTT+AGG | - | chr6.1:7532410-7532429 | MS.gene074061:intron | 20.0% |
| !!! | TTTTTTGTGATGTTAATCAT+GGG | - | chr6.1:7529173-7529192 | MS.gene074061:intron | 20.0% |
| ! | AAACTAAGATAACATGTTAG+AGG | - | chr6.1:7531604-7531623 | MS.gene074061:intron | 25.0% |
| ! | AACCTAAAATAAAAAACTGC+AGG | + | chr6.1:7529735-7529754 | None:intergenic | 25.0% |
| ! | AATCTATAAGAGAAACTGTT+AGG | - | chr6.1:7529522-7529541 | MS.gene074061:intron | 25.0% |
| ! | AATTAAATACAACTCTTCTG+TGG | - | chr6.1:7533261-7533280 | MS.gene074061:intron | 25.0% |
| ! | AGATTTGGAAATTAATGTGT+TGG | - | chr6.1:7529547-7529566 | MS.gene074061:intron | 25.0% |
| ! | AGGAATTAGACCTATTATAT+CGG | - | chr6.1:7531360-7531379 | MS.gene074061:intron | 25.0% |
| ! | ATAATAAGGTTGTTCAAGAA+TGG | + | chr6.1:7531405-7531424 | None:intergenic | 25.0% |
| ! | ATAATGATCTCATTATTCTG+AGG | - | chr6.1:7531854-7531873 | MS.gene074061:intron | 25.0% |
| ! | ATCAAATTCAATCACAAAGA+TGG | + | chr6.1:7531196-7531215 | None:intergenic | 25.0% |
| ! | ATGTTCTGTAATATGCATTA+TGG | - | chr6.1:7529684-7529703 | MS.gene074061:intron | 25.0% |
| ! | ATTAATTGCTAATGTTGAAG+TGG | - | chr6.1:7530430-7530449 | MS.gene074061:intron | 25.0% |
| ! | ATTCTTAAACTACAGTACAT+TGG | + | chr6.1:7530849-7530868 | None:intergenic | 25.0% |
| ! | GATATGTAATGAAACAAATG+TGG | + | chr6.1:7533713-7533732 | None:intergenic | 25.0% |
| ! | TAATAAGTAACAACAAACAC+TGG | + | chr6.1:7533455-7533474 | None:intergenic | 25.0% |
| ! | TACATGTTTAGGTCAAATAA+AGG | + | chr6.1:7531141-7531160 | None:intergenic | 25.0% |
| ! | TAGTTTGGACAAATAACATT+TGG | + | chr6.1:7531590-7531609 | None:intergenic | 25.0% |
| ! | TCTAACATGTTATCTTAGTT+TGG | + | chr6.1:7531605-7531624 | None:intergenic | 25.0% |
| ! | TGAATCAATACCGATATAAT+AGG | + | chr6.1:7531373-7531392 | None:intergenic | 25.0% |
| ! | TGTTCTGTAATATGCATTAT+GGG | - | chr6.1:7529685-7529704 | MS.gene074061:intron | 25.0% |
| ! | TTAACTTCGTAATCAAAACA+AGG | + | chr6.1:7531274-7531293 | None:intergenic | 25.0% |
| ! | TTATATTATTGTTCAGTGGA+TGG | - | chr6.1:7533216-7533235 | MS.gene074061:intron | 25.0% |
| ! | TTCTATCATTCACCAAATTT+CGG | + | chr6.1:7529574-7529593 | None:intergenic | 25.0% |
| !! | GTTTCTCTTATAGATTTTCT+AGG | + | chr6.1:7529518-7529537 | None:intergenic | 25.0% |
| !! | TTGCATTGAATTGTAGTTTT+TGG | - | chr6.1:7533878-7533897 | MS.gene074061:intron | 25.0% |
| !! | TTGTTATTCTGATAATTTGG+GGG | - | chr6.1:7530145-7530164 | MS.gene074061:intron | 25.0% |
| !!! | AACCTGCAGTTTTTTATTTT+AGG | - | chr6.1:7529730-7529749 | MS.gene074061:intron | 25.0% |
| !!! | ACGTATCTTTTTTCAATTCT+AGG | - | chr6.1:7531001-7531020 | MS.gene074061:intron | 25.0% |
| !!! | ATTTGAGTTACTTTTATGCA+AGG | - | chr6.1:7533637-7533656 | MS.gene074061:intron | 25.0% |
| !!! | CATTTTTTTCAGAGGTATTT+TGG | - | chr6.1:7532306-7532325 | MS.gene074061:intron | 25.0% |
| !!! | GTTTTGTTTCTTTTAGGAAT+TGG | - | chr6.1:7529328-7529347 | MS.gene074061:intron | 25.0% |
| !!! | TAATGGGTTTTGTTTCTTTT+AGG | - | chr6.1:7529322-7529341 | MS.gene074061:intron | 25.0% |
| !!! | TGCAAATTTGGTTGATTTTA+GGG | - | chr6.1:7530205-7530224 | MS.gene074061:intron | 25.0% |
| !!! | TTCATCTGTTTGATTTGTAT+TGG | - | chr6.1:7533750-7533769 | MS.gene074061:intron | 25.0% |
| !!! | TTGTACTGATTTGTTTGTAT+TGG | - | chr6.1:7532283-7532302 | MS.gene074061:intron | 25.0% |
| AAGTAATAGTTGCAAGCAAA+TGG | + | chr6.1:7531107-7531126 | None:intergenic | 30.0% | |
| ACAGCTATGAACAATAATTG+TGG | - | chr6.1:7532382-7532401 | MS.gene074061:intron | 30.0% | |
| AGAAACTGTTAGGAAAGATT+TGG | - | chr6.1:7529532-7529551 | MS.gene074061:intron | 30.0% | |
| AGAGATTAAGAAAAAACTGC+AGG | - | chr6.1:7533007-7533026 | MS.gene074061:intron | 30.0% | |
| ATAACTTGAAATAGAGGTGA+AGG | - | chr6.1:7531640-7531659 | MS.gene074061:intron | 30.0% | |
| ATGCTGCTATAAAAGTTTGA+TGG | - | chr6.1:7531214-7531233 | MS.gene074061:intron | 30.0% | |
| ATGTTTAGGTCAAATAAAGG+AGG | + | chr6.1:7531138-7531157 | None:intergenic | 30.0% | |
| CACAAAAAATCGACAAAAGA+TGG | + | chr6.1:7529162-7529181 | None:intergenic | 30.0% | |
| CTACAAAATTAATCTTGTGC+AGG | - | chr6.1:7533929-7533948 | MS.gene074061:CDS | 30.0% | |
| GGTCGTTCTATATAATATGT+AGG | + | chr6.1:7530681-7530700 | None:intergenic | 30.0% | |
| GTATTCCTCAAGGAAAAAAA+CGG | - | chr6.1:7531329-7531348 | MS.gene074061:intron | 30.0% | |
| TAAATTAGCACTCGAAGAAA+TGG | - | chr6.1:7533989-7534008 | MS.gene074061:CDS | 30.0% | |
| TCAAACAGATGAAACAAATG+TGG | + | chr6.1:7533743-7533762 | None:intergenic | 30.0% | |
| TCAGTACAAATAAATTCGCA+TGG | + | chr6.1:7532272-7532291 | None:intergenic | 30.0% | |
| TCTTGTTACTGTCTTTCATT+TGG | - | chr6.1:7530340-7530359 | MS.gene074061:intron | 30.0% | |
| TGGTGAATGATAGAACATTA+TGG | - | chr6.1:7529579-7529598 | MS.gene074061:intron | 30.0% | |
| TTGTGCAAATGCAGTATATA+TGG | - | chr6.1:7533517-7533536 | MS.gene074061:intron | 30.0% | |
| ! | AGCTAGTGATTTTTGATAGA+TGG | - | chr6.1:7529407-7529426 | MS.gene074061:intron | 30.0% |
| ! | CAACTTTTCTCATCAAGTTT+TGG | - | chr6.1:7529128-7529147 | MS.gene074061:intron | 30.0% |
| ! | CCATGAATCGTTTTCAAATT+GGG | + | chr6.1:7530702-7530721 | None:intergenic | 30.0% |
| ! | TAGATTTGAAACTTTGTTGC+AGG | - | chr6.1:7530068-7530087 | MS.gene074061:intron | 30.0% |
| ! | TAGTGATTTTTGATAGATGG+TGG | - | chr6.1:7529410-7529429 | MS.gene074061:CDS | 30.0% |
| ! | TCGGTAGTTATTTGATAACA+TGG | + | chr6.1:7532510-7532529 | None:intergenic | 30.0% |
| ! | TTTTTCCTTGAGGAATACAT+CGG | + | chr6.1:7531327-7531346 | None:intergenic | 30.0% |
| !! | ATTTTACCTTGGTAGTTCTA+TGG | - | chr6.1:7530619-7530638 | MS.gene074061:intron | 30.0% |
| !! | GTGCAAATTTGGTTGATTTT+AGG | - | chr6.1:7530204-7530223 | MS.gene074061:intron | 30.0% |
| !! | GTTTCTTTTAGGAATTGGAA+TGG | - | chr6.1:7529333-7529352 | MS.gene074061:intron | 30.0% |
| !! | TTTTACCTTGGTAGTTCTAT+GGG | - | chr6.1:7530620-7530639 | MS.gene074061:intron | 30.0% |
| !!! | TAGATACTAGTTTTGGGTTT+TGG | - | chr6.1:7529801-7529820 | MS.gene074061:intron | 30.0% |
| !!! | TGTATTGGCATTTTTTTCAG+AGG | - | chr6.1:7532298-7532317 | MS.gene074061:intron | 30.0% |
| AAACTTGAATGCATTTCGAC+AGG | + | chr6.1:7533858-7533877 | None:intergenic | 35.0% | |
| AAAGCGACTCTTAATTCTGT+CGG | - | chr6.1:7533797-7533816 | MS.gene074061:intron | 35.0% | |
| AACTTGAATGCATTTCGACA+GGG | + | chr6.1:7533857-7533876 | None:intergenic | 35.0% | |
| AAGTCTATCACGTTTCTTTC+TGG | + | chr6.1:7530400-7530419 | None:intergenic | 35.0% | |
| ACGCTGAAAAGAAACATAAC+CGG | + | chr6.1:7531915-7531934 | None:intergenic | 35.0% | |
| ACTACTGCACAAAGAAATGA+TGG | + | chr6.1:7532897-7532916 | None:intergenic | 35.0% | |
| AGGAATACATCGGTAAATGA+TGG | + | chr6.1:7531317-7531336 | None:intergenic | 35.0% | |
| AGGAATTGGAATGGAATCAA+GGG | - | chr6.1:7529342-7529361 | MS.gene074061:intron | 35.0% | |
| AGTAAGGAGAGTAAATCAGA+TGG | - | chr6.1:7529461-7529480 | MS.gene074061:CDS | 35.0% | |
| AGTAGCATTAAGTAGAAGCA+GGG | - | chr6.1:7530558-7530577 | MS.gene074061:intron | 35.0% | |
| ATCAAACCGTCAACATGAAA+AGG | - | chr6.1:7533600-7533619 | MS.gene074061:intron | 35.0% | |
| ATCAAATAACTACCGAGTTC+CGG | - | chr6.1:7532514-7532533 | MS.gene074061:intron | 35.0% | |
| ATCTTGTGAATGTCTTTGCA+GGG | - | chr6.1:7533346-7533365 | MS.gene074061:intron | 35.0% | |
| ATTCAAAGTTGTGCACATAC+TGG | + | chr6.1:7532851-7532870 | None:intergenic | 35.0% | |
| ATTTACCGATGTATTCCTCA+AGG | - | chr6.1:7531319-7531338 | MS.gene074061:intron | 35.0% | |
| ATTTGAAAACGATTCATGGC+CGG | - | chr6.1:7530703-7530722 | MS.gene074061:intron | 35.0% | |
| CAAACACGATTGCTATCTAA+AGG | - | chr6.1:7531532-7531551 | MS.gene074061:intron | 35.0% | |
| CATTGTCACTGAAATAATCG+CGG | - | chr6.1:7530758-7530777 | MS.gene074061:intron | 35.0% | |
| CATTTCTTTGTGCAGTAGTA+TGG | - | chr6.1:7532898-7532917 | MS.gene074061:intron | 35.0% | |
| CCCAATTTGAAAACGATTCA+TGG | - | chr6.1:7530699-7530718 | MS.gene074061:intron | 35.0% | |
| CGCTTGAGATTTGAAAGTAA+GGG | - | chr6.1:7529826-7529845 | MS.gene074061:intron | 35.0% | |
| CTAAGAGTGAAAGATTGTGA+AGG | - | chr6.1:7530469-7530488 | MS.gene074061:intron | 35.0% | |
| CTACTTCAATAACACCTTGT+CGG | + | chr6.1:7533406-7533425 | None:intergenic | 35.0% | |
| CTTTAGATAGCAATCGTGTT+TGG | + | chr6.1:7531534-7531553 | None:intergenic | 35.0% | |
| GAGAAGACGAATGTTTATTC+CGG | - | chr6.1:7531893-7531912 | MS.gene074061:intron | 35.0% | |
| GATTGAAAAGTTGAAGCTTG+CGG | - | chr6.1:7533370-7533389 | MS.gene074061:intron | 35.0% | |
| GGAATACATCGGTAAATGAT+GGG | + | chr6.1:7531316-7531335 | None:intergenic | 35.0% | |
| TAATGTGTTGGACCGAAATT+TGG | - | chr6.1:7529559-7529578 | MS.gene074061:intron | 35.0% | |
| TAGGAATTGGAATGGAATCA+AGG | - | chr6.1:7529341-7529360 | MS.gene074061:intron | 35.0% | |
| TATATATGGAGTTCATGACG+AGG | - | chr6.1:7533531-7533550 | MS.gene074061:intron | 35.0% | |
| TATCTTGTGAATGTCTTTGC+AGG | - | chr6.1:7533345-7533364 | MS.gene074061:intron | 35.0% | |
| TCGCTTGAGATTTGAAAGTA+AGG | - | chr6.1:7529825-7529844 | MS.gene074061:intron | 35.0% | |
| TCTGCAGCACCATTATAAAT+CGG | + | chr6.1:7532091-7532110 | None:intergenic | 35.0% | |
| TTTGTTGCAGGACTGTTATT+GGG | - | chr6.1:7530080-7530099 | MS.gene074061:intron | 35.0% | |
| ! | AAACACTGCTTGATGATTGA+TGG | - | chr6.1:7531726-7531745 | MS.gene074061:intron | 35.0% |
| ! | ATGCAAGGATGGAATTGTTT+TGG | - | chr6.1:7530108-7530127 | MS.gene074061:intron | 35.0% |
| ! | ATGGTGGAAAATATGCTTAG+GGG | - | chr6.1:7529426-7529445 | MS.gene074061:CDS | 35.0% |
| ! | ATGTTTCTTTTCAGCGTGTA+CGG | - | chr6.1:7531918-7531937 | MS.gene074061:intron | 35.0% |
| ! | CTTTTCCTACTATGTGGAAT+CGG | + | chr6.1:7529624-7529643 | None:intergenic | 35.0% |
| ! | GCCATGAATCGTTTTCAAAT+TGG | + | chr6.1:7530703-7530722 | None:intergenic | 35.0% |
| ! | GTGATGTTAATCATGGGTTT+TGG | - | chr6.1:7529179-7529198 | MS.gene074061:intron | 35.0% |
| ! | TACTTTGTTGTCTCTTGCTT+TGG | + | chr6.1:7531752-7531771 | None:intergenic | 35.0% |
| ! | TGACACTGTTTTGTGTAACT+TGG | - | chr6.1:7531827-7531846 | MS.gene074061:intron | 35.0% |
| ! | TGGAATTGAGGGTTTTTGTT+TGG | - | chr6.1:7530023-7530042 | MS.gene074061:intron | 35.0% |
| ! | TGGTAATAAGTGTTGTCAGA+GGG | - | chr6.1:7532963-7532982 | MS.gene074061:intron | 35.0% |
| !! | AGATGGTGGAAAATATGCTT+AGG | - | chr6.1:7529424-7529443 | MS.gene074061:CDS | 35.0% |
| !! | CTTCAAAAGAAGAGCATCTA+AGG | + | chr6.1:7532751-7532770 | None:intergenic | 35.0% |
| !! | GAGTTGATTTGGACTATCTT+TGG | - | chr6.1:7533052-7533071 | MS.gene074061:intron | 35.0% |
| !! | GATGGTGGAAAATATGCTTA+GGG | - | chr6.1:7529425-7529444 | MS.gene074061:CDS | 35.0% |
| !! | TGCAAGTTTTGTCTCATATG+CGG | - | chr6.1:7532771-7532790 | MS.gene074061:CDS | 35.0% |
| !! | TGCTAATTTAGCTGCTGTTT+TGG | + | chr6.1:7533979-7533998 | None:intergenic | 35.0% |
| !!! | AACTACCGTTTTTTTCCTTG+AGG | + | chr6.1:7531337-7531356 | None:intergenic | 35.0% |
| !!! | TCATGGGTTTTGGTTGTTTT+TGG | - | chr6.1:7529189-7529208 | MS.gene074061:intron | 35.0% |
| AACGGCGTGAATTCTTCTAT+TGG | + | chr6.1:7530272-7530291 | None:intergenic | 40.0% | |
| AAGGAGAGTAAATCAGATGG+AGG | - | chr6.1:7529464-7529483 | MS.gene074061:CDS | 40.0% | |
| ACCGTCAACATGAAAAGGTA+AGG | - | chr6.1:7533605-7533624 | MS.gene074061:intron | 40.0% | |
| AGATGGACCACAATTGTACA+TGG | - | chr6.1:7532149-7532168 | MS.gene074061:intron | 40.0% | |
| AGTATGACACCACATCCAAA+AGG | + | chr6.1:7532114-7532133 | None:intergenic | 40.0% | |
| ATCAGGAGAGAAAGTAGTGA+CGG | + | chr6.1:7529042-7529061 | None:intergenic | 40.0% | |
| ATGGAAGGCAAATTGTTGCT+AGG | - | chr6.1:7531045-7531064 | MS.gene074061:CDS | 40.0% | |
| ATTTCGAACTCGAAATGAGC+TGG | - | chr6.1:7533566-7533585 | MS.gene074061:intron | 40.0% | |
| CAACATGAAAAGGTAAGGCA+GGG | - | chr6.1:7533610-7533629 | MS.gene074061:intron | 40.0% | |
| CAGTAGCATTAAGTAGAAGC+AGG | - | chr6.1:7530557-7530576 | MS.gene074061:intron | 40.0% | |
| CCCTTCGAAAATGATGCTTT+CGG | - | chr6.1:7530243-7530262 | MS.gene074061:intron | 40.0% | |
| CCTTCGAAAATGATGCTTTC+GGG | - | chr6.1:7530244-7530263 | MS.gene074061:intron | 40.0% | |
| CGATTCCACATAGTAGGAAA+AGG | - | chr6.1:7529622-7529641 | MS.gene074061:CDS | 40.0% | |
| CTTATCCCATAGAACTACCA+AGG | + | chr6.1:7530628-7530647 | None:intergenic | 40.0% | |
| CTTTGTTGCAGGACTGTTAT+TGG | - | chr6.1:7530079-7530098 | MS.gene074061:intron | 40.0% | |
| GAAAATATGCTTAGGGGGTT+TGG | - | chr6.1:7529432-7529451 | MS.gene074061:CDS | 40.0% | |
| GGAAAAAAACGGTAGTTGCT+AGG | - | chr6.1:7531340-7531359 | MS.gene074061:intron | 40.0% | |
| GGAGGATAGTAGATAACTAG+AGG | - | chr6.1:7529482-7529501 | MS.gene074061:intron | 40.0% | |
| GGAGGGTAGTTCAATAAGTA+GGG | - | chr6.1:7532984-7533003 | MS.gene074061:intron | 40.0% | |
| TAAGCCATGACAAGGAACTA+TGG | - | chr6.1:7533078-7533097 | MS.gene074061:intron | 40.0% | |
| TAAGTAGAAGCAGGGTTCTA+AGG | - | chr6.1:7530566-7530585 | MS.gene074061:intron | 40.0% | |
| TAGTAGATAACTAGAGGCAG+AGG | - | chr6.1:7529488-7529507 | MS.gene074061:intron | 40.0% | |
| TCAACATGAAAAGGTAAGGC+AGG | - | chr6.1:7533609-7533628 | MS.gene074061:intron | 40.0% | |
| TGAACATAGAACAAAGAGCC+CGG | + | chr6.1:7530725-7530744 | None:intergenic | 40.0% | |
| TGGAAGGCAAATTGTTGCTA+GGG | - | chr6.1:7531046-7531065 | MS.gene074061:CDS | 40.0% | |
| TGGTGGAAAATATGCTTAGG+GGG | - | chr6.1:7529427-7529446 | MS.gene074061:CDS | 40.0% | |
| TGTTATTGGGATCAGATGCA+AGG | - | chr6.1:7530093-7530112 | MS.gene074061:intron | 40.0% | |
| TGTTCTATCCTAACACGTGT+GGG | - | chr6.1:7532048-7532067 | MS.gene074061:intron | 40.0% | |
| TTTCAATTCTAGGCTGTAGC+AGG | - | chr6.1:7531011-7531030 | MS.gene074061:intron | 40.0% | |
| TTTCGAACTCGAAATGAGCT+GGG | - | chr6.1:7533567-7533586 | MS.gene074061:intron | 40.0% | |
| TTTGAAAACGATTCATGGCC+GGG | - | chr6.1:7530704-7530723 | MS.gene074061:intron | 40.0% | |
| TTTGGACATAAGCCATGACA+AGG | - | chr6.1:7533070-7533089 | MS.gene074061:intron | 40.0% | |
| ! | AACAAAGTACCATTCCAGAG+TGG | + | chr6.1:7530300-7530319 | None:intergenic | 40.0% |
| ! | AATAAGTGTTGTCAGAGGGA+GGG | - | chr6.1:7532967-7532986 | MS.gene074061:intron | 40.0% |
| ! | AGCGAGATTGAGAGTTGATT+TGG | - | chr6.1:7533041-7533060 | MS.gene074061:intron | 40.0% |
| ! | CAATTGAACCTTTTCTCGCT+AGG | + | chr6.1:7533139-7533158 | None:intergenic | 40.0% |
| ! | CTGGTAATAAGTGTTGTCAG+AGG | - | chr6.1:7532962-7532981 | MS.gene074061:intron | 40.0% |
| ! | GCCTTACCTTTTCATGTTGA+CGG | + | chr6.1:7533609-7533628 | None:intergenic | 40.0% |
| ! | TAATAAGTGTTGTCAGAGGG+AGG | - | chr6.1:7532966-7532985 | MS.gene074061:intron | 40.0% |
| ! | TAGGTTGAGGCATGAACAAA+GGG | + | chr6.1:7532712-7532731 | None:intergenic | 40.0% |
| !! | TCGGTATTGATTCAACCTTC+TGG | - | chr6.1:7531379-7531398 | MS.gene074061:intron | 40.0% |
| !! | TTTGGATGTGGTGTCATACT+AGG | - | chr6.1:7532114-7532133 | MS.gene074061:intron | 40.0% |
| !! | TTTTGAGAATCAGCTGCTGA+AGG | - | chr6.1:7532562-7532581 | MS.gene074061:intron | 40.0% |
| !!! | AGGTATTTTGGTGCTGCAAT+CGG | - | chr6.1:7532318-7532337 | MS.gene074061:intron | 40.0% |
| !!! | AGGTTTTAAAGCGCACAAGT+AGG | + | chr6.1:7532731-7532750 | None:intergenic | 40.0% |
| !!! | CCGAAAGCATCATTTTCGAA+GGG | + | chr6.1:7530246-7530265 | None:intergenic | 40.0% |
| AACAGAGATCCCCATGTAAC+CGG | + | chr6.1:7532536-7532555 | None:intergenic | 45.0% | |
| ACCTCTGCACATTATACTGG+TGG | - | chr6.1:7531991-7532010 | MS.gene074061:intron | 45.0% | |
| AGGTTGAGGCATGAACAAAG+GGG | + | chr6.1:7532711-7532730 | None:intergenic | 45.0% | |
| AGTTAAGTTCTGTGAGCTCC+TGG | - | chr6.1:7530806-7530825 | MS.gene074061:intron | 45.0% | |
| ATGCATTTCGACAGGGATTG+TGG | + | chr6.1:7533850-7533869 | None:intergenic | 45.0% | |
| ATTGGGATCAGATGCAAGGA+TGG | - | chr6.1:7530097-7530116 | MS.gene074061:intron | 45.0% | |
| CCAAAGCTGTCGACAATAGT+GGG | - | chr6.1:7529090-7529109 | MS.gene074061:intron | 45.0% | |
| CCACATAGTAGGAAAAGGCT+TGG | - | chr6.1:7529627-7529646 | MS.gene074061:CDS | 45.0% | |
| CTATGGCGTCGTTTGGTAAA+TGG | - | chr6.1:7533095-7533114 | MS.gene074061:intron | 45.0% | |
| CTGAAGCAACTAACTACGAC+AGG | - | chr6.1:7531075-7531094 | MS.gene074061:CDS | 45.0% | |
| CTTACATAGGAGACACCAGA+AGG | + | chr6.1:7532180-7532199 | None:intergenic | 45.0% | |
| GCAAGTTCCTTGACAGGAAT+AGG | + | chr6.1:7531948-7531967 | None:intergenic | 45.0% | |
| GGGAGGGTAGTTCAATAAGT+AGG | - | chr6.1:7532983-7533002 | MS.gene074061:intron | 45.0% | |
| GTACGCTCCCTAAAACACAA+TGG | + | chr6.1:7532803-7532822 | None:intergenic | 45.0% | |
| GTCACTACTTTCTCTCCTGA+TGG | - | chr6.1:7529041-7529060 | MS.gene074061:CDS | 45.0% | |
| GTGTTCTATCCTAACACGTG+TGG | - | chr6.1:7532047-7532066 | MS.gene074061:intron | 45.0% | |
| GTTAAGTTCTGTGAGCTCCT+GGG | - | chr6.1:7530807-7530826 | MS.gene074061:intron | 45.0% | |
| GTTGTTCAAGAATGGCCAGA+AGG | + | chr6.1:7531397-7531416 | None:intergenic | 45.0% | |
| TAAAGCGCACAAGTAGGTTG+AGG | + | chr6.1:7532725-7532744 | None:intergenic | 45.0% | |
| TAATCTTGTGCAGGTTCCAG+AGG | - | chr6.1:7533938-7533957 | MS.gene074061:CDS | 45.0% | |
| TGATCCTACCTAGCGAGAAA+AGG | - | chr6.1:7533128-7533147 | MS.gene074061:intron | 45.0% | |
| TGCACCTCTGCACATTATAC+TGG | - | chr6.1:7531988-7532007 | MS.gene074061:CDS | 45.0% | |
| TTAAGTTCTGTGAGCTCCTG+GGG | - | chr6.1:7530808-7530827 | MS.gene074061:intron | 45.0% | |
| TTCAATAACACCTTGTCGGC+AGG | + | chr6.1:7533402-7533421 | None:intergenic | 45.0% | |
| ! | CCAAGCCTTTTCCTACTATG+TGG | + | chr6.1:7529630-7529649 | None:intergenic | 45.0% |
| ! | GCTGCTGCCATTGTGTTTTA+GGG | - | chr6.1:7532793-7532812 | MS.gene074061:intron | 45.0% |
| ! | GTAGGAAAAGGCTTGGTTGT+TGG | - | chr6.1:7529634-7529653 | MS.gene074061:CDS | 45.0% |
| ! | GTAGGTTGAGGCATGAACAA+AGG | + | chr6.1:7532713-7532732 | None:intergenic | 45.0% |
| ! | TGAACCTTTTCTCGCTAGGT+AGG | + | chr6.1:7533135-7533154 | None:intergenic | 45.0% |
| ! | TGAAGTATCCCACACGTGTT+AGG | + | chr6.1:7532059-7532078 | None:intergenic | 45.0% |
| ! | TGTAGCCGATTCCACATAGT+AGG | - | chr6.1:7529616-7529635 | MS.gene074061:CDS | 45.0% |
| !!! | CCCGAAAGCATCATTTTCGA+AGG | + | chr6.1:7530247-7530266 | None:intergenic | 45.0% |
| !!! | GGTATTTTGGTGCTGCAATC+GGG | - | chr6.1:7532319-7532338 | MS.gene074061:intron | 45.0% |
| !!! | TAATGGTGCTGCAGACCTTT+TGG | - | chr6.1:7532096-7532115 | MS.gene074061:intron | 45.0% |
| !!! | ATTTTTTTAGATATTAATAA+TGG | - | chr6.1:7529305-7529324 | MS.gene074061:intron | 5.0% |
| !!! | TTCATATTTTTTAAATAATA+AGG | + | chr6.1:7531419-7531438 | None:intergenic | 5.0% |
| !!! | TTTTTTTAGATATTAATAAT+GGG | - | chr6.1:7529306-7529325 | MS.gene074061:intron | 5.0% |
| AAGGGGGGTAGAAGAAAACG+TGG | + | chr6.1:7532694-7532713 | None:intergenic | 50.0% | |
| ACAGGCTGCGAAAACGTAAG+TGG | - | chr6.1:7532350-7532369 | MS.gene074061:intron | 50.0% | |
| ACTACCGAGTTCCGGTTACA+TGG | - | chr6.1:7532522-7532541 | MS.gene074061:intron | 50.0% | |
| ATCCCCATGTAACCGGAACT+CGG | + | chr6.1:7532529-7532548 | None:intergenic | 50.0% | |
| ATCTGGAAAACGCGACCATC+AGG | + | chr6.1:7529059-7529078 | None:intergenic | 50.0% | |
| CAAGGAACTATGGCGTCGTT+TGG | - | chr6.1:7533088-7533107 | MS.gene074061:intron | 50.0% | |
| CATTCCAGAGTGGCGATGAA+CGG | + | chr6.1:7530290-7530309 | None:intergenic | 50.0% | |
| CCCACTATTGTCGACAGCTT+TGG | + | chr6.1:7529093-7529112 | None:intergenic | 50.0% | |
| CGATCAGCAAGTTCCTTGAC+AGG | + | chr6.1:7531954-7531973 | None:intergenic | 50.0% | |
| CGGTGATCCTATTCCTGTCA+AGG | - | chr6.1:7531938-7531957 | MS.gene074061:CDS | 50.0% | |
| CTACCGAGTTCCGGTTACAT+GGG | - | chr6.1:7532523-7532542 | MS.gene074061:intron | 50.0% | |
| CTAGGTGGTTACGACAGAGA+TGG | - | chr6.1:7532132-7532151 | MS.gene074061:intron | 50.0% | |
| CTTTGGCAGCGTATTCGATC+TGG | + | chr6.1:7529076-7529095 | None:intergenic | 50.0% | |
| GACGCCATAGTTCCTTGTCA+TGG | + | chr6.1:7533085-7533104 | None:intergenic | 50.0% | |
| GCACATTATACTGGTGGCTC+AGG | - | chr6.1:7531997-7532016 | MS.gene074061:intron | 50.0% | |
| GCCAAAGCTGTCGACAATAG+TGG | - | chr6.1:7529089-7529108 | MS.gene074061:intron | 50.0% | |
| GCCACCAGTATAATGTGCAG+AGG | + | chr6.1:7531995-7532014 | None:intergenic | 50.0% | |
| GGCTCGACCATGTACAATTG+TGG | + | chr6.1:7532159-7532178 | None:intergenic | 50.0% | |
| GGGGGTTTGGACATGTAGTA+AGG | - | chr6.1:7529445-7529464 | MS.gene074061:CDS | 50.0% | |
| GGTTGAGGCATGAACAAAGG+GGG | + | chr6.1:7532710-7532729 | None:intergenic | 50.0% | |
| GTCTTGCGAAGCGTACACAT+AGG | - | chr6.1:7530499-7530518 | MS.gene074061:intron | 50.0% | |
| GTTGAGGCATGAACAAAGGG+GGG | + | chr6.1:7532709-7532728 | None:intergenic | 50.0% | |
| TACCGAGTTCCGGTTACATG+GGG | - | chr6.1:7532524-7532543 | MS.gene074061:intron | 50.0% | |
| TATGTTCCTCAGCCCTTCTC+TGG | - | chr6.1:7532662-7532681 | MS.gene074061:intron | 50.0% | |
| TGGAGTTCATGACGAGGCAA+AGG | - | chr6.1:7533537-7533556 | MS.gene074061:intron | 50.0% | |
| TTGTACATGGTCGAGCCTTC+TGG | - | chr6.1:7532162-7532181 | MS.gene074061:intron | 50.0% | |
| ! | AACGTGGACTGTACCAGAGA+AGG | + | chr6.1:7532678-7532697 | None:intergenic | 50.0% |
| ! | ACGTGGACTGTACCAGAGAA+GGG | + | chr6.1:7532677-7532696 | None:intergenic | 50.0% |
| ! | GCTTCTTCTAGAAGCTCCTC+TGG | + | chr6.1:7533957-7533976 | None:intergenic | 50.0% |
| ! | GGCTGCTGCCATTGTGTTTT+AGG | - | chr6.1:7532792-7532811 | MS.gene074061:intron | 50.0% |
| ! | TGCTGCAGACCTTTTGGATG+TGG | - | chr6.1:7532102-7532121 | MS.gene074061:intron | 50.0% |
| !! | AGCTGTCGACAATAGTGGGT+AGG | - | chr6.1:7529094-7529113 | MS.gene074061:intron | 50.0% |
| !! | CAAGGAACTTGCTGATCGTG+TGG | - | chr6.1:7531956-7531975 | MS.gene074061:CDS | 50.0% |
| !! | CAGGATTAGCTGCAGATGGA+AGG | - | chr6.1:7531030-7531049 | MS.gene074061:CDS | 50.0% |
| !! | GCTGTCGACAATAGTGGGTA+GGG | - | chr6.1:7529095-7529114 | MS.gene074061:intron | 50.0% |
| !! | GGATGTGGTGTCATACTAGG+TGG | - | chr6.1:7532117-7532136 | MS.gene074061:intron | 50.0% |
| !! | GTAGCAGGATTAGCTGCAGA+TGG | - | chr6.1:7531026-7531045 | MS.gene074061:CDS | 50.0% |
| !! | TTTGGTGCTGCAATCGGGAA+GGG | - | chr6.1:7532324-7532343 | MS.gene074061:intron | 50.0% |
| !!! | TTTTGGTGCTGCAATCGGGA+AGG | - | chr6.1:7532323-7532342 | MS.gene074061:intron | 50.0% |
| ACTGTACCAGAGAAGGGCTG+AGG | + | chr6.1:7532671-7532690 | None:intergenic | 55.0% | |
| ! | CGTTCATCGCCACTCTGGAA+TGG | - | chr6.1:7530288-7530307 | MS.gene074061:intron | 55.0% |
| GCGGATATGACCTGCCGACA+AGG | - | chr6.1:7533389-7533408 | MS.gene074061:intron | 60.0% | |
| GCTGCTTAGTGCATTGCCCC+AGG | + | chr6.1:7530827-7530846 | None:intergenic | 60.0% | |
| TGCAATCGGGAAGGGCAGAC+AGG | - | chr6.1:7532332-7532351 | MS.gene074061:intron | 60.0% | |
| CACGCCGTTCATCGCCACTC+TGG | - | chr6.1:7530283-7530302 | MS.gene074061:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 7529008 | 7534022 | 7529008 | ID=MS.gene074061 |
| chr6.1 | mRNA | 7529008 | 7534022 | 7529008 | ID=MS.gene074061.t1;Parent=MS.gene074061 |
| chr6.1 | exon | 7533919 | 7534022 | 7533919 | ID=MS.gene074061.t1.exon1;Parent=MS.gene074061.t1 |
| chr6.1 | CDS | 7533919 | 7534022 | 7533919 | ID=cds.MS.gene074061.t1;Parent=MS.gene074061.t1 |
| chr6.1 | exon | 7532901 | 7532940 | 7532901 | ID=MS.gene074061.t1.exon2;Parent=MS.gene074061.t1 |
| chr6.1 | CDS | 7532901 | 7532940 | 7532901 | ID=cds.MS.gene074061.t1;Parent=MS.gene074061.t1 |
| chr6.1 | exon | 7532721 | 7532804 | 7532721 | ID=MS.gene074061.t1.exon3;Parent=MS.gene074061.t1 |
| chr6.1 | CDS | 7532721 | 7532804 | 7532721 | ID=cds.MS.gene074061.t1;Parent=MS.gene074061.t1 |
| chr6.1 | exon | 7531934 | 7532007 | 7531934 | ID=MS.gene074061.t1.exon4;Parent=MS.gene074061.t1 |
| chr6.1 | CDS | 7531934 | 7532007 | 7531934 | ID=cds.MS.gene074061.t1;Parent=MS.gene074061.t1 |
| chr6.1 | exon | 7531012 | 7531098 | 7531012 | ID=MS.gene074061.t1.exon5;Parent=MS.gene074061.t1 |
| chr6.1 | CDS | 7531012 | 7531098 | 7531012 | ID=cds.MS.gene074061.t1;Parent=MS.gene074061.t1 |
| chr6.1 | exon | 7530836 | 7530920 | 7530836 | ID=MS.gene074061.t1.exon6;Parent=MS.gene074061.t1 |
| chr6.1 | CDS | 7530836 | 7530920 | 7530836 | ID=cds.MS.gene074061.t1;Parent=MS.gene074061.t1 |
| chr6.1 | exon | 7530666 | 7530712 | 7530666 | ID=MS.gene074061.t1.exon7;Parent=MS.gene074061.t1 |
| chr6.1 | CDS | 7530666 | 7530712 | 7530666 | ID=cds.MS.gene074061.t1;Parent=MS.gene074061.t1 |
| chr6.1 | exon | 7529598 | 7529663 | 7529598 | ID=MS.gene074061.t1.exon8;Parent=MS.gene074061.t1 |
| chr6.1 | CDS | 7529598 | 7529663 | 7529598 | ID=cds.MS.gene074061.t1;Parent=MS.gene074061.t1 |
| chr6.1 | exon | 7529409 | 7529499 | 7529409 | ID=MS.gene074061.t1.exon9;Parent=MS.gene074061.t1 |
| chr6.1 | CDS | 7529409 | 7529499 | 7529409 | ID=cds.MS.gene074061.t1;Parent=MS.gene074061.t1 |
| chr6.1 | exon | 7529008 | 7529079 | 7529008 | ID=MS.gene074061.t1.exon10;Parent=MS.gene074061.t1 |
| chr6.1 | CDS | 7529008 | 7529079 | 7529008 | ID=cds.MS.gene074061.t1;Parent=MS.gene074061.t1 |
| Gene Sequence |
| Protein sequence |
