AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene065045

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene065045.t1 MTR_1g112250 100.000 237 0 0 1 237 1 237 6.99e-179 490
MS.gene065045.t1 MTR_6g013300 62.150 214 64 5 31 237 133 336 5.84e-75 230
MS.gene065045.t1 MTR_5g016590 42.324 241 121 7 8 236 5 239 5.90e-59 187
MS.gene065045.t1 MTR_7g070070 45.161 217 107 5 8 218 5 215 3.07e-58 185
MS.gene065045.t1 MTR_2g016050 40.343 233 129 5 6 234 2 228 1.55e-50 165
MS.gene065045.t1 MTR_8g075320 41.593 226 124 4 8 231 4 223 1.73e-50 165
MS.gene065045.t1 MTR_0167s0060 35.526 228 142 2 6 231 4 228 1.86e-47 157
MS.gene065045.t1 MTR_1g022410 46.154 182 93 2 3 184 1 177 3.76e-47 157
MS.gene065045.t1 MTR_8g464460 34.199 231 142 5 8 231 9 236 1.82e-40 139
MS.gene065045.t1 MTR_2g060830 32.900 231 145 5 8 231 9 236 9.43e-39 135
MS.gene065045.t1 MTR_6g024135 34.783 207 120 2 6 206 6 203 4.23e-38 133
MS.gene065045.t1 MTR_4g012740 32.127 221 105 4 3 184 232 446 1.72e-24 101
MS.gene065045.t1 MTR_4g057090 34.239 184 97 7 11 184 91 260 2.26e-17 80.1
MS.gene065045.t1 MTR_3g089040 28.313 166 107 3 34 196 54 210 1.15e-14 71.6
MS.gene065045.t1 MTR_5g006840 30.464 151 94 3 45 192 13 155 9.80e-13 65.5
MS.gene065045.t1 MTR_5g012470 28.249 177 114 4 42 213 10 178 1.17e-12 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene065045.t1 AT3G14290 97.468 237 6 0 1 237 1 237 1.10e-175 482
MS.gene065045.t1 AT1G53850 97.046 237 7 0 1 237 1 237 3.38e-175 481
MS.gene065045.t1 AT1G53850 97.046 237 7 0 1 237 1 237 3.38e-175 481
MS.gene065045.t1 AT3G22110 41.494 241 123 7 8 236 5 239 1.09e-56 181
MS.gene065045.t1 AT5G66140 43.000 200 108 3 8 205 4 199 5.82e-48 159
MS.gene065045.t1 AT1G16470 35.088 228 143 2 6 231 4 228 1.49e-47 157
MS.gene065045.t1 AT1G16470 35.088 228 143 2 6 231 4 228 1.49e-47 157
MS.gene065045.t1 AT3G51260 41.038 212 117 4 7 216 3 208 1.57e-47 157
MS.gene065045.t1 AT1G79210 34.188 234 149 2 6 237 4 234 1.60e-47 157
MS.gene065045.t1 AT1G79210 34.188 234 149 2 6 237 4 234 1.60e-47 157
MS.gene065045.t1 AT1G79210 34.188 234 149 2 6 237 4 234 1.60e-47 157
MS.gene065045.t1 AT3G51260 42.500 200 109 3 8 205 4 199 2.55e-47 157
MS.gene065045.t1 AT5G42790 39.506 243 125 4 3 234 1 232 1.92e-46 155
MS.gene065045.t1 AT1G47250 45.856 181 93 2 3 183 1 176 2.94e-46 155
MS.gene065045.t1 AT5G35590 35.498 231 139 5 8 231 9 236 2.76e-41 141
MS.gene065045.t1 AT2G27020 33.333 207 123 2 6 206 6 203 5.55e-38 133
MS.gene065045.t1 AT2G05840 34.434 212 132 4 8 215 9 217 2.04e-37 130
MS.gene065045.t1 AT2G05840 34.419 215 134 4 8 218 9 220 2.70e-37 131
MS.gene065045.t1 AT2G27020 33.333 207 123 2 6 206 108 305 8.22e-37 132
MS.gene065045.t1 AT4G15165 31.535 241 105 6 8 236 5 197 3.71e-35 124
MS.gene065045.t1 AT2G05840 35.263 190 118 3 8 195 9 195 5.92e-35 124
MS.gene065045.t1 AT3G26340 26.500 200 132 5 27 220 48 238 7.60e-15 72.4
MS.gene065045.t1 AT1G13060 25.654 191 129 4 34 220 57 238 1.05e-13 69.3
MS.gene065045.t1 AT4G14800 28.652 178 115 4 45 218 13 182 2.94e-12 63.9
MS.gene065045.t1 AT5G40580 25.616 203 141 3 31 231 36 230 3.84e-12 64.7
MS.gene065045.t1 AT5G40580 25.616 203 141 3 31 231 36 230 3.84e-12 64.7
MS.gene065045.t1 AT3G27430 26.108 203 140 3 31 231 36 230 7.31e-12 63.9
MS.gene065045.t1 AT4G14800 28.495 186 121 4 45 218 13 198 7.47e-12 63.2
MS.gene065045.t1 AT3G27430 26.108 203 140 3 31 231 36 230 9.13e-12 63.5

Find 53 sgRNAs with CRISPR-Local

Find 332 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGATCCTTCTGGCACATTT+TGG 0.189061 1.2:+83065621 MS.gene065045:CDS
TCCCGAGGGACGTTTGTTTC+AGG 0.218421 1.2:+83062720 MS.gene065045:CDS
GTGACCTAGCCTTGCGCTTT+GGG 0.251856 1.2:+83064133 MS.gene065045:CDS
ATATGCAATTGAAGCTATTA+AGG 0.287746 1.2:+83062747 MS.gene065045:CDS
CTTTGGCAGTCTCGACCATT+TGG 0.312188 1.2:+83064593 MS.gene065045:intron
GGAGTGTCTCTCCTTATTGC+TGG 0.335194 1.2:+83064614 MS.gene065045:CDS
TGTGACCTAGCCTTGCGCTT+TGG 0.345737 1.2:+83064132 MS.gene065045:CDS
CAGAATCACAGGTTCTCTTA+TGG 0.347192 1.2:+83064072 MS.gene065045:intron
CAATGCAATGCAAAGGCTAT+TGG 0.347609 1.2:+83065644 MS.gene065045:CDS
TCTCGTCATGGCCAGCAATA+AGG 0.348529 1.2:-83064625 None:intergenic
CAGCAGTGTGGAGAAAATTA+TGG 0.366170 1.2:+83063808 MS.gene065045:CDS
ATCAATTCTGAAGCAAGTTA+TGG 0.388035 1.2:+83066944 MS.gene065045:CDS
CCAACAACGTTGACATTGCC+AGG 0.408754 1.2:+83067075 MS.gene065045:CDS
CCTGGCAATGTCAACGTTGT+TGG 0.426746 1.2:-83067075 None:intergenic
CAGCTTGGATCAACTGCGAT+TGG 0.442542 1.2:+83062876 MS.gene065045:intron
CTGGCAATGTCAACGTTGTT+GGG 0.454160 1.2:-83067074 None:intergenic
GCGTATTACTTCGCCTCTAC+TGG 0.457074 1.2:+83062938 MS.gene065045:CDS
AGATATTACACTGATCCTTC+TGG 0.466365 1.2:+83065611 MS.gene065045:intron
AACCTGAAACAAACGTCCCT+CGG 0.497703 1.2:-83062722 None:intergenic
AATGCAAAGGCTATTGGTTC+AGG 0.500036 1.2:+83065650 MS.gene065045:CDS
CTAGCCTTGCGCTTTGGGGA+AGG 0.509941 1.2:+83064138 MS.gene065045:CDS
ATTGCTGGCCATGACGAGAA+TGG 0.514622 1.2:+83064629 MS.gene065045:CDS
GGAATATATACTTACAGGCT+AGG 0.527284 1.2:-83064653 None:intergenic
ATCACAGCTTCCACCTCAGA+CGG 0.535599 1.2:-83067125 None:intergenic
TCACAGCTTCCACCTCAGAC+GGG 0.536535 1.2:-83067124 None:intergenic
TCTTTATACCCCGTCTGAGG+TGG 0.544181 1.2:+83067115 MS.gene065045:CDS
CTTGAAAACGAAAGAGGGTG+TGG 0.545014 1.2:+83062899 MS.gene065045:CDS
ATGATACGCTGGAGCAACCC+TGG 0.548475 1.2:-83067093 None:intergenic
ACCTGAAACAAACGTCCCTC+GGG 0.549237 1.2:-83062721 None:intergenic
CTTCCCCAAAGCGCAAGGCT+AGG 0.558153 1.2:-83064137 None:intergenic
GAAGCAAGTTATGGAAGAGA+AGG 0.568369 1.2:+83066953 MS.gene065045:CDS
GGCTAGGTCCATTCTCGTCA+TGG 0.580425 1.2:-83064637 None:intergenic
ATAAGGAGAGACACTCCAAA+TGG 0.589626 1.2:-83064608 None:intergenic
TGACCTAGCCTTGCGCTTTG+GGG 0.590485 1.2:+83064134 MS.gene065045:CDS
GCTATTGGTTCAGGATCAGA+AGG 0.597231 1.2:+83065659 MS.gene065045:CDS
GTCACCTTCCCCAAAGCGCA+AGG 0.600125 1.2:-83064142 None:intergenic
GTTGTAGACTCTACAGTCAT+CGG 0.602200 1.2:-83064099 None:intergenic
CACATTGGCTGTGCAATGAG+TGG 0.606594 1.2:+83063842 MS.gene065045:CDS
GATTGGCTTGAAAACGAAAG+AGG 0.610207 1.2:+83062893 MS.gene065045:CDS
GGAAGGTGACGAAGAATCCA+TGG 0.613263 1.2:+83064155 MS.gene065045:CDS
CATTGCCAAAATGTGCCAGA+AGG 0.618837 1.2:-83065626 None:intergenic
AAACCAACATGTTTCTCACA+AGG 0.620638 1.2:+83062496 None:intergenic
ATGGAAATTGATGATCACAT+TGG 0.621320 1.2:+83063827 MS.gene065045:CDS
GAATAGGTACATACCAGTAG+AGG 0.625077 1.2:-83062951 None:intergenic
ATTGGCTTGAAAACGAAAGA+GGG 0.626167 1.2:+83062894 MS.gene065045:CDS
TCATCTTTATACCCCGTCTG+AGG 0.634475 1.2:+83067112 MS.gene065045:CDS
CAACAACGTTGACATTGCCA+GGG 0.635659 1.2:+83067076 MS.gene065045:CDS
CACAGCTTCCACCTCAGACG+GGG 0.645540 1.2:-83067123 None:intergenic
GGGGTATAAAGATGATACGC+TGG 0.658506 1.2:-83067104 None:intergenic
GCATGCACGAGTTGAAACTC+AGG 0.662565 1.2:+83063895 MS.gene065045:CDS
CTTTCAGGAGCCCAGCAGTG+TGG 0.675944 1.2:+83063796 MS.gene065045:intron
ATTAGAACTGAGTATGACCG+TGG 0.689159 1.2:+83062682 MS.gene065045:intron
TCTGCAAGAACAATTCAACA+AGG 0.713271 1.2:+83065694 MS.gene065045:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTATTATTATTATTATTA+GGG + chr1.2:83062791-83062810 MS.gene065045:intron 0.0%
!! TTATTATTATTATTATTATT+AGG + chr1.2:83062790-83062809 MS.gene065045:intron 0.0%
!! AATAATAATAACAATAATAG+AGG - chr1.2:83062781-83062800 None:intergenic 10.0%
!! ACAAAAAAAAATTACATAAA+AGG - chr1.2:83062977-83062996 None:intergenic 10.0%
!! ATAATAATAACAATAATAGA+GGG - chr1.2:83062780-83062799 None:intergenic 10.0%
!! CAAAAAAAAATTACATAAAA+GGG - chr1.2:83062976-83062995 None:intergenic 10.0%
!!! TTTAGAATAAATTGAATTAT+GGG + chr1.2:83063296-83063315 MS.gene065045:intron 10.0%
!!! TTTATAATTTAAAATGTTGT+TGG + chr1.2:83066775-83066794 MS.gene065045:intron 10.0%
!! ATATCATTAAAATTATTAGC+TGG + chr1.2:83065770-83065789 MS.gene065045:intron 15.0%
!! ATTAATTACCTTAATTCTTT+GGG + chr1.2:83066640-83066659 MS.gene065045:intron 15.0%
!! TATCATTAAAATTATTAGCT+GGG + chr1.2:83065771-83065790 MS.gene065045:intron 15.0%
!! TATTAATTACCTTAATTCTT+TGG + chr1.2:83066639-83066658 MS.gene065045:intron 15.0%
!! TTAGAATAAATTGAATTATG+GGG + chr1.2:83063297-83063316 MS.gene065045:intron 15.0%
!!! ATATTGATATTGATCTATTT+TGG + chr1.2:83064038-83064057 MS.gene065045:intron 15.0%
!!! CTTTCTTATTATTTCTTTAA+TGG + chr1.2:83065114-83065133 MS.gene065045:intron 15.0%
!!! GTTTAGAATAAATTGAATTA+TGG + chr1.2:83063295-83063314 MS.gene065045:intron 15.0%
!!! TTTTTTATTAGTGTACAAAT+GGG + chr1.2:83064462-83064481 MS.gene065045:intron 15.0%
!!! TTTTTTTATTAGTGTACAAA+TGG + chr1.2:83064461-83064480 MS.gene065045:intron 15.0%
!! AAAATTACATAAAAGGGAAT+AGG - chr1.2:83062970-83062989 None:intergenic 20.0%
!! AAATTGTAATGTATGTTTCA+TGG - chr1.2:83063761-83063780 None:intergenic 20.0%
!! AACAAAAATCCTAATACATT+TGG - chr1.2:83062629-83062648 None:intergenic 20.0%
!! AACAAAAATGAGAAAATTAC+AGG - chr1.2:83064966-83064985 None:intergenic 20.0%
!! AATAAAAAAGAAAGAAGTGA+TGG - chr1.2:83065025-83065044 None:intergenic 20.0%
!! AATAAATATGACTATAAGCA+CGG - chr1.2:83063719-83063738 None:intergenic 20.0%
!! ACAAAAATCCTAATACATTT+GGG - chr1.2:83062628-83062647 None:intergenic 20.0%
!! ATAAAAAAACACCTTACAAA+AGG - chr1.2:83064450-83064469 None:intergenic 20.0%
!! ATAAAAAAGAAAGAAGTGAT+GGG - chr1.2:83065024-83065043 None:intergenic 20.0%
!! ATATTAAACATTCCTATGAA+AGG + chr1.2:83064411-83064430 MS.gene065045:intron 20.0%
!! ATGTTAAAACATTTCTAAAC+CGG + chr1.2:83064917-83064936 MS.gene065045:intron 20.0%
!! ATTAGTTAAATTACAGAGAA+AGG + chr1.2:83064818-83064837 MS.gene065045:intron 20.0%
!! CTAAACTTAAAATCTATTGT+TGG + chr1.2:83064388-83064407 MS.gene065045:intron 20.0%
!! TGTTAAATAGATACACAAAA+TGG + chr1.2:83066469-83066488 MS.gene065045:intron 20.0%
!! TTAATTACCTTAATTCTTTG+GGG + chr1.2:83066641-83066660 MS.gene065045:intron 20.0%
!!! AGAATATCAATATGATTTGT+AGG - chr1.2:83066696-83066715 None:intergenic 20.0%
!!! CAACAATAGATTTTAAGTTT+AGG - chr1.2:83064390-83064409 None:intergenic 20.0%
!!! TACCATTTATTTTTTCTCTT+TGG + chr1.2:83064576-83064595 MS.gene065045:intron 20.0%
!!! TGATTGATATTGATCTATTT+TGG + chr1.2:83063967-83063986 MS.gene065045:intron 20.0%
! AAGAGTTGAATACGATTTAT+AGG - chr1.2:83066672-83066691 None:intergenic 25.0%
! AATAGAATGTTGTATGTAGT+TGG + chr1.2:83063935-83063954 MS.gene065045:intron 25.0%
! AGACAAAAATATACAAGAGA+TGG - chr1.2:83066730-83066749 None:intergenic 25.0%
! AGCTAAAAAGTTATATACCA+TGG - chr1.2:83064175-83064194 None:intergenic 25.0%
! AGTTAGAATATATTCTCAGT+AGG - chr1.2:83067023-83067042 None:intergenic 25.0%
! ATATGCAATTGAAGCTATTA+AGG + chr1.2:83062747-83062766 MS.gene065045:CDS 25.0%
! ATTAAAATTATTAGCTGGGA+TGG + chr1.2:83065775-83065794 MS.gene065045:intron 25.0%
! CAAAAATCCTAATACATTTG+GGG - chr1.2:83062627-83062646 None:intergenic 25.0%
! CATGCATATATTTCTTACTT+GGG - chr1.2:83063244-83063263 None:intergenic 25.0%
! GAAATAATAAGAAAGAGTGA+AGG - chr1.2:83065109-83065128 None:intergenic 25.0%
! GTTAGAATATATTCTCAGTA+GGG - chr1.2:83067022-83067041 None:intergenic 25.0%
! TAGATGGAATATATACTTAC+AGG - chr1.2:83064661-83064680 None:intergenic 25.0%
! TATAGAATGTTGTATGTAGT+TGG + chr1.2:83063995-83064014 MS.gene065045:intron 25.0%
! TGCATATTCTGAATGTTTAA+TGG + chr1.2:83064317-83064336 MS.gene065045:intron 25.0%
! TGCCAAAGAGAAAAAATAAA+TGG - chr1.2:83064581-83064600 None:intergenic 25.0%
! TTAGAATATATTCTCAGTAG+GGG - chr1.2:83067021-83067040 None:intergenic 25.0%
! TTGCTTAAAGATTATCTTTC+AGG + chr1.2:83066824-83066843 MS.gene065045:intron 25.0%
! TTGTAAAAGATACTTACTAG+TGG + chr1.2:83064517-83064536 MS.gene065045:intron 25.0%
!! AAAAGAAAGTGTAACATACA+AGG - chr1.2:83064792-83064811 None:intergenic 25.0%
!! ATTGATTTATTATGTTGTGC+AGG + chr1.2:83066887-83066906 MS.gene065045:intron 25.0%
!! ATTTATTTCCCTTTTCATTC+TGG + chr1.2:83065551-83065570 MS.gene065045:intron 25.0%
!! TAATTTTCCCCAAATGTATT+AGG + chr1.2:83062617-83062636 MS.gene065045:intron 25.0%
!! TATGTTACACTTTCTTTTCT+GGG + chr1.2:83064794-83064813 MS.gene065045:intron 25.0%
!! TCAGAATTACATCTAAAACT+GGG - chr1.2:83063658-83063677 None:intergenic 25.0%
!! TGTTATTTGCAACAGTATTA+AGG - chr1.2:83066614-83066633 None:intergenic 25.0%
!! TTCAGAATTACATCTAAAAC+TGG - chr1.2:83063659-83063678 None:intergenic 25.0%
!!! ATCTCTTGTATATTTTTGTC+TGG + chr1.2:83066729-83066748 MS.gene065045:intron 25.0%
!!! GGTTTTTAACTATCTGTATT+CGG + chr1.2:83062812-83062831 MS.gene065045:intron 25.0%
!!! GTATTAGGATTTTTGTTTCT+AGG + chr1.2:83062632-83062651 MS.gene065045:intron 25.0%
!!! GTTTTTAACTATCTGTATTC+GGG + chr1.2:83062813-83062832 MS.gene065045:intron 25.0%
!!! TATTTTGATTTTGTAGGATC+AGG + chr1.2:83065474-83065493 MS.gene065045:intron 25.0%
!!! TTCACAAATACTTTTGAGAA+AGG - chr1.2:83065055-83065074 None:intergenic 25.0%
!!! TTTATTTTTCACAGAATCAC+AGG + chr1.2:83064061-83064080 MS.gene065045:intron 25.0%
!!! TTTCTCATTTTTGTTTCACT+TGG + chr1.2:83064971-83064990 MS.gene065045:intron 25.0%
AAAAGAATTTGGGCTCTATT+TGG + chr1.2:83066307-83066326 MS.gene065045:intron 30.0%
AAATTCTTGCCAAATATGTC+CGG - chr1.2:83064939-83064958 None:intergenic 30.0%
AACACAGAAAATGAGTCAAA+AGG - chr1.2:83064720-83064739 None:intergenic 30.0%
AAGATTATCTTTCAGGATAG+AGG + chr1.2:83066831-83066850 MS.gene065045:intron 30.0%
AATTGAATTATGGGGATATC+TGG + chr1.2:83063305-83063324 MS.gene065045:intron 30.0%
AGAAAATAATTGCACAGCAT+GGG + chr1.2:83065451-83065470 MS.gene065045:intron 30.0%
ATGAAAATCTGCCCTAAAAA+GGG - chr1.2:83063197-83063216 None:intergenic 30.0%
ATTGAGTCTCAAATCCTAAT+TGG - chr1.2:83065370-83065389 None:intergenic 30.0%
ATTTCTAAACCGGACATATT+TGG + chr1.2:83064927-83064946 MS.gene065045:intron 30.0%
GACATGAAAACAAGTGAATT+TGG + chr1.2:83066863-83066882 MS.gene065045:intron 30.0%
GCATGCATATATTTCTTACT+TGG - chr1.2:83063245-83063264 None:intergenic 30.0%
GTCATCTATAGTAGAAAGAT+GGG - chr1.2:83066245-83066264 None:intergenic 30.0%
TAGAATATATTCTCAGTAGG+GGG - chr1.2:83067020-83067039 None:intergenic 30.0%
TATAAGCGAGACTATTAAGA+AGG - chr1.2:83066077-83066096 None:intergenic 30.0%
TATATATTCCATCTAAGCCA+TGG + chr1.2:83064666-83064685 MS.gene065045:intron 30.0%
TCATCTATAGTAGAAAGATG+GGG - chr1.2:83066244-83066263 None:intergenic 30.0%
TCTCCATTTCTCAAAACAAA+TGG - chr1.2:83066438-83066457 None:intergenic 30.0%
TGTGTTAAAATTCCACTTTC+AGG + chr1.2:83063781-83063800 MS.gene065045:intron 30.0%
TTCTACCATCTTTCTACTAT+AGG + chr1.2:83066213-83066232 MS.gene065045:intron 30.0%
TTCTGCGTCTAAAAGAATTT+GGG + chr1.2:83066297-83066316 MS.gene065045:intron 30.0%
TTCTTGTTCAAACTAGTTCA+TGG + chr1.2:83065282-83065301 MS.gene065045:intron 30.0%
TTGAGTCTCAAATCCTAATT+GGG - chr1.2:83065369-83065388 None:intergenic 30.0%
TTTCTGCGTCTAAAAGAATT+TGG + chr1.2:83066296-83066315 MS.gene065045:intron 30.0%
! AAATTCTTTTAGACGCAGAA+AGG - chr1.2:83066297-83066316 None:intergenic 30.0%
! ACTGCTGTTTGATAATTTGT+TGG - chr1.2:83063436-83063455 None:intergenic 30.0%
! ATGGAAATTGATGATCACAT+TGG + chr1.2:83063827-83063846 MS.gene065045:CDS 30.0%
! ATGTTACACTTTCTTTTCTG+GGG + chr1.2:83064795-83064814 MS.gene065045:intron 30.0%
! GAGAATGATGCTATAGTTTT+AGG + chr1.2:83065143-83065162 MS.gene065045:intron 30.0%
! GTAAATACATCTTTTCTGTG+CGG + chr1.2:83065199-83065218 MS.gene065045:intron 30.0%
! GTATGTTACACTTTCTTTTC+TGG + chr1.2:83064793-83064812 MS.gene065045:intron 30.0%
!! ATCAATTCTGAAGCAAGTTA+TGG + chr1.2:83066944-83066963 MS.gene065045:CDS 30.0%
!! GGTTTTTCAATAGAACATCA+TGG - chr1.2:83066023-83066042 None:intergenic 30.0%
!! TGCATTAATTTGTCTGTGAT+GGG - chr1.2:83065416-83065435 None:intergenic 30.0%
!!! CATGGGTATTTTGATTTTGT+AGG + chr1.2:83065468-83065487 MS.gene065045:intron 30.0%
!!! TTTTTTGTTGGATTTCAGCT+TGG + chr1.2:83062861-83062880 MS.gene065045:intron 30.0%
AAAACTGGGTATAACACGTT+TGG - chr1.2:83063644-83063663 None:intergenic 35.0%
AAATTAGACTCAGGTGGTTT+GGG - chr1.2:83066195-83066214 None:intergenic 35.0%
AACTGGAAGTAACATGCATT+TGG - chr1.2:83066990-83067009 None:intergenic 35.0%
AATTACAGAGAAAGGACATG+TGG + chr1.2:83064826-83064845 MS.gene065045:intron 35.0%
AGAATATATTCTCAGTAGGG+GGG - chr1.2:83067019-83067038 None:intergenic 35.0%
AGATATTACACTGATCCTTC+TGG + chr1.2:83065611-83065630 MS.gene065045:intron 35.0%
AGATGGTAGAAATTAGACTC+AGG - chr1.2:83066204-83066223 None:intergenic 35.0%
AGGAAACATTTAGTGGTAGT+TGG + chr1.2:83065334-83065353 MS.gene065045:intron 35.0%
CAGAAAATAATTGCACAGCA+TGG + chr1.2:83065450-83065469 MS.gene065045:intron 35.0%
CCACTAAATGTTTCCTGTTA+TGG - chr1.2:83065330-83065349 None:intergenic 35.0%
CCATAACAGGAAACATTTAG+TGG + chr1.2:83065327-83065346 MS.gene065045:intron 35.0%
CGTCATCTATAGTAGAAAGA+TGG - chr1.2:83066246-83066265 None:intergenic 35.0%
CTCCTTACTACAAAATCCAT+AGG + chr1.2:83066154-83066173 MS.gene065045:intron 35.0%
GATGAAAATCTGCCCTAAAA+AGG - chr1.2:83063198-83063217 None:intergenic 35.0%
GGAATATATACTTACAGGCT+AGG - chr1.2:83064656-83064675 None:intergenic 35.0%
GGATATTCATATGCAAAGAG+TGG + chr1.2:83064883-83064902 MS.gene065045:intron 35.0%
GTAACAACTCTCCTCATTAT+GGG - chr1.2:83066533-83066552 None:intergenic 35.0%
GTGTAACATACAAGGAACAA+CGG - chr1.2:83064784-83064803 None:intergenic 35.0%
GTTTCCTGTTATGGTTCAAA+AGG - chr1.2:83065321-83065340 None:intergenic 35.0%
TAACAACTCTCCTCATTATG+GGG - chr1.2:83066532-83066551 None:intergenic 35.0%
TAATAAGCTGGAGAAAGACA+TGG - chr1.2:83066044-83066063 None:intergenic 35.0%
TCTCCAGCTTATTAATCTCT+AGG + chr1.2:83066050-83066069 MS.gene065045:intron 35.0%
TCTGCAAGAACAATTCAACA+AGG + chr1.2:83065694-83065713 MS.gene065045:CDS 35.0%
TCTTGTGTAAAAACAGGGTA+AGG + chr1.2:83063097-83063116 MS.gene065045:intron 35.0%
TGAGTCTCAAATCCTAATTG+GGG - chr1.2:83065368-83065387 None:intergenic 35.0%
TGCTTACAGTGCTTTCTTTA+AGG + chr1.2:83064223-83064242 MS.gene065045:intron 35.0%
TGTATTTACGCACACATCAA+TGG - chr1.2:83065188-83065207 None:intergenic 35.0%
TTAACTATCTGTATTCGGGT+TGG + chr1.2:83062817-83062836 MS.gene065045:intron 35.0%
TTCAGAATATGCAACACACA+AGG - chr1.2:83064310-83064329 None:intergenic 35.0%
TTCTTCTGTACTTTCGCATT+AGG + chr1.2:83067046-83067065 MS.gene065045:intron 35.0%
! AAGAACAGTCGCAATTTTTC+TGG + chr1.2:83064862-83064881 MS.gene065045:intron 35.0%
! ATAATTTTCTCCACACTGCT+GGG - chr1.2:83063809-83063828 None:intergenic 35.0%
! GACCTATGGATTTTGTAGTA+AGG - chr1.2:83066159-83066178 None:intergenic 35.0%
! GTCTCGCTTATAGTTTTTCT+AGG + chr1.2:83066085-83066104 MS.gene065045:intron 35.0%
! TAATTTGTCTGTGATGGGAA+TGG - chr1.2:83065411-83065430 None:intergenic 35.0%
!! ATACTTACTAGTGGTGTTGT+TGG + chr1.2:83064526-83064545 MS.gene065045:intron 35.0%
!! ATTGGCTTGAAAACGAAAGA+GGG + chr1.2:83062894-83062913 MS.gene065045:CDS 35.0%
!! ATTTTGGCAATGCAATGCAA+AGG + chr1.2:83065637-83065656 MS.gene065045:CDS 35.0%
!! CTGCATTAATTTGTCTGTGA+TGG - chr1.2:83065417-83065436 None:intergenic 35.0%
!! TTTTGTTTCACTTGGTTCCT+TGG + chr1.2:83064979-83064998 MS.gene065045:intron 35.0%
!!! GCTCCATTTGTTTTGAGAAA+TGG + chr1.2:83066432-83066451 MS.gene065045:intron 35.0%
!!! TTACCCTGTTTTTACACAAG+AGG - chr1.2:83063098-83063117 None:intergenic 35.0%
AACAACCCACTGTAAGAACA+TGG - chr1.2:83065723-83065742 None:intergenic 40.0%
AACACCTTACAAAAGGACAG+TGG - chr1.2:83064443-83064462 None:intergenic 40.0%
AAGGTTGTGGACATTTCACA+TGG - chr1.2:83063595-83063614 None:intergenic 40.0%
ACACTGCATTGTTCAACTCT+CGG + chr1.2:83065233-83065252 MS.gene065045:intron 40.0%
ACAGCCTCTTGTGTAAAAAC+AGG + chr1.2:83063091-83063110 MS.gene065045:intron 40.0%
ACATGACTCAGAAGTAACCA+TGG - chr1.2:83064686-83064705 None:intergenic 40.0%
ACCAATGGTCCAGAATGAAA+AGG - chr1.2:83065563-83065582 None:intergenic 40.0%
ACGCAGAAAGGATCTTAAGA+GGG - chr1.2:83066285-83066304 None:intergenic 40.0%
ACTAGTTCATGGTAGCAACT+TGG + chr1.2:83065293-83065312 MS.gene065045:intron 40.0%
AGAAGTAACCATGGCTTAGA+TGG - chr1.2:83064677-83064696 None:intergenic 40.0%
AGCATAGATCCAAGAATTCC+AGG - chr1.2:83066555-83066574 None:intergenic 40.0%
AGGTATCCATGTTCTTACAG+TGG + chr1.2:83065714-83065733 MS.gene065045:intron 40.0%
AGTAAGGAGAGTAGATCAGA+TGG - chr1.2:83066143-83066162 None:intergenic 40.0%
AGTCAAATCACTAGAGGTAG+GGG - chr1.2:83066115-83066134 None:intergenic 40.0%
ATAAGGAGAGACACTCCAAA+TGG - chr1.2:83064611-83064630 None:intergenic 40.0%
ATTAGAACTGAGTATGACCG+TGG + chr1.2:83062682-83062701 MS.gene065045:intron 40.0%
CAATGCAATGCAAAGGCTAT+TGG + chr1.2:83065644-83065663 MS.gene065045:CDS 40.0%
CACACATCAATGGTAAGAGT+AGG - chr1.2:83065178-83065197 None:intergenic 40.0%
CAGAATCACAGGTTCTCTTA+TGG + chr1.2:83064072-83064091 MS.gene065045:intron 40.0%
CAGCACCTATAGTAGAAAGA+TGG - chr1.2:83066221-83066240 None:intergenic 40.0%
CAGCAGTGTGGAGAAAATTA+TGG + chr1.2:83063808-83063827 MS.gene065045:CDS 40.0%
CAGCCTCTTGTGTAAAAACA+GGG + chr1.2:83063092-83063111 MS.gene065045:intron 40.0%
CAGTGGCTTAATCCTTTCAT+AGG - chr1.2:83064426-83064445 None:intergenic 40.0%
CCAATGGTCCAGAATGAAAA+GGG - chr1.2:83065562-83065581 None:intergenic 40.0%
CGTACAATACACCAAATGGT+GGG + chr1.2:83063123-83063142 MS.gene065045:intron 40.0%
CTTATCTCACTAAGTGGAGT+CGG + chr1.2:83065978-83065997 MS.gene065045:intron 40.0%
GAAATTAGACTCAGGTGGTT+TGG - chr1.2:83066196-83066215 None:intergenic 40.0%
GAAGCAAGTTATGGAAGAGA+AGG + chr1.2:83066953-83066972 MS.gene065045:CDS 40.0%
GAATAGGTACATACCAGTAG+AGG - chr1.2:83062954-83062973 None:intergenic 40.0%
GAGTCAAATCACTAGAGGTA+GGG - chr1.2:83066116-83066135 None:intergenic 40.0%
GAGTCTCAAATCCTAATTGG+GGG - chr1.2:83065367-83065386 None:intergenic 40.0%
GAGTTGTTACCTGGAATTCT+TGG + chr1.2:83066543-83066562 MS.gene065045:intron 40.0%
GGACCTAGAGATTAATAAGC+TGG - chr1.2:83066056-83066075 None:intergenic 40.0%
GGTAACAACTCTCCTCATTA+TGG - chr1.2:83066534-83066553 None:intergenic 40.0%
GGTATCCATGTTCTTACAGT+GGG + chr1.2:83065715-83065734 MS.gene065045:intron 40.0%
GTGCATGCAGATTCAAAACA+TGG + chr1.2:83065887-83065906 MS.gene065045:intron 40.0%
GTTGTAGACTCTACAGTCAT+CGG - chr1.2:83064102-83064121 None:intergenic 40.0%
GTTGTTGTCATGTGACTGTA+AGG + chr1.2:83063047-83063066 MS.gene065045:intron 40.0%
TAACAGTCAGTTTAGCAGTG+CGG + chr1.2:83063383-83063402 MS.gene065045:intron 40.0%
TAATGAGGAGAGTTGTTACC+TGG + chr1.2:83066534-83066553 MS.gene065045:intron 40.0%
TATTAGCTGGGATGGTAAAG+TGG + chr1.2:83065783-83065802 MS.gene065045:intron 40.0%
TCAGCAGTCACTAGATGATA+CGG + chr1.2:83065507-83065526 MS.gene065045:intron 40.0%
TGCAAAGAGTGGTTAATGAG+TGG + chr1.2:83064894-83064913 MS.gene065045:intron 40.0%
TGGTAGAAATTAGACTCAGG+TGG - chr1.2:83066201-83066220 None:intergenic 40.0%
TTTAACCTCAGCAAGACCAA+TGG - chr1.2:83065578-83065597 None:intergenic 40.0%
! AAGATGGCATGTTACTTCCA+AGG - chr1.2:83064999-83065018 None:intergenic 40.0%
! ATCTCCATTTTCTCCACAGT+TGG - chr1.2:83065850-83065869 None:intergenic 40.0%
! CATAATTTTCTCCACACTGC+TGG - chr1.2:83063810-83063829 None:intergenic 40.0%
! CATGCAAGTTCACAGGTTTT+GGG - chr1.2:83064249-83064268 None:intergenic 40.0%
! GCATGCACTAAATTTGAGAC+TGG - chr1.2:83065875-83065894 None:intergenic 40.0%
! TAAGCCACTGTCCTTTTGTA+AGG + chr1.2:83064436-83064455 MS.gene065045:intron 40.0%
! TCATGCAAGTTCACAGGTTT+TGG - chr1.2:83064250-83064269 None:intergenic 40.0%
! TTAGGGCAGATTTTCATCGA+GGG + chr1.2:83063001-83063020 MS.gene065045:intron 40.0%
!! AATGCAAAGGCTATTGGTTC+AGG + chr1.2:83065650-83065669 MS.gene065045:CDS 40.0%
!! GAGAAAAAGTGTTGACTCCA+CGG - chr1.2:83062702-83062721 None:intergenic 40.0%
!! GATTGGCTTGAAAACGAAAG+AGG + chr1.2:83062893-83062912 MS.gene065045:CDS 40.0%
!! TTTAGGGCAGATTTTCATCG+AGG + chr1.2:83063000-83063019 MS.gene065045:intron 40.0%
AACCCCAAAAGTGGGATAGA+GGG - chr1.2:83063462-83063481 None:intergenic 45.0%
AACCTGAAACAAACGTCCCT+CGG - chr1.2:83062725-83062744 None:intergenic 45.0%
AAGCGATCATGCAAGTTCAC+AGG - chr1.2:83064256-83064275 None:intergenic 45.0%
AAGGAGAGTAGATCAGATGG+AGG - chr1.2:83066140-83066159 None:intergenic 45.0%
AGAGAGAGAGAGAGAGGAAA+GGG - chr1.2:83062527-83062546 None:intergenic 45.0%
AGGAGAGTAGATCAGATGGA+GGG - chr1.2:83066139-83066158 None:intergenic 45.0%
CAACAACGTTGACATTGCCA+GGG + chr1.2:83067076-83067095 MS.gene065045:CDS 45.0%
CATTGCCAAAATGTGCCAGA+AGG - chr1.2:83065629-83065648 None:intergenic 45.0%
CCACTTAGTGAGATAAGGCT+TGG - chr1.2:83065975-83065994 None:intergenic 45.0%
CGACTCCACTTAGTGAGATA+AGG - chr1.2:83065980-83065999 None:intergenic 45.0%
CGCAGAAAGGATCTTAAGAG+GGG - chr1.2:83066284-83066303 None:intergenic 45.0%
CTCTCCAACTGTGGAGAAAA+TGG + chr1.2:83065843-83065862 MS.gene065045:intron 45.0%
CTGGCAATGTCAACGTTGTT+GGG - chr1.2:83067077-83067096 None:intergenic 45.0%
CTTGAAAACGAAAGAGGGTG+TGG + chr1.2:83062899-83062918 MS.gene065045:CDS 45.0%
GACGCAGAAAGGATCTTAAG+AGG - chr1.2:83066286-83066305 None:intergenic 45.0%
GACTACGCACATGTTTGTCT+TGG + chr1.2:83063509-83063528 MS.gene065045:intron 45.0%
GCATGTAGAGAGAAGACCTA+TGG - chr1.2:83066173-83066192 None:intergenic 45.0%
GCGTACAATACACCAAATGG+TGG + chr1.2:83063122-83063141 MS.gene065045:intron 45.0%
GCTGCGTACAATACACCAAA+TGG + chr1.2:83063119-83063138 MS.gene065045:intron 45.0%
GGAGTCAAATCACTAGAGGT+AGG - chr1.2:83066117-83066136 None:intergenic 45.0%
GGCGAAACCCCAAAGAATTA+AGG - chr1.2:83066651-83066670 None:intergenic 45.0%
GGGGTATAAAGATGATACGC+TGG - chr1.2:83067107-83067126 None:intergenic 45.0%
GTCATGTGACTGTAAGGTCA+CGG + chr1.2:83063053-83063072 MS.gene065045:intron 45.0%
GTGAAATGTCCACAACCTTG+CGG + chr1.2:83063596-83063615 MS.gene065045:intron 45.0%
TACGCACATGTTTGTCTTGG+TGG + chr1.2:83063512-83063531 MS.gene065045:intron 45.0%
TCATCTTTATACCCCGTCTG+AGG + chr1.2:83067112-83067131 MS.gene065045:CDS 45.0%
TCATGTGACTGTAAGGTCAC+GGG + chr1.2:83063054-83063073 MS.gene065045:intron 45.0%
TTGGCATCTTACCCCCAATT+AGG + chr1.2:83065353-83065372 MS.gene065045:intron 45.0%
! ACACGTTTGGATGTGCGTTT+TGG - chr1.2:83063631-83063650 None:intergenic 45.0%
! CATTTTCTCCACAGTTGGAG+AGG - chr1.2:83065845-83065864 None:intergenic 45.0%
! CCAAGCCTTATCTCACTAAG+TGG + chr1.2:83065972-83065991 MS.gene065045:intron 45.0%
! CCCTTTTCATTCTGGACCAT+TGG + chr1.2:83065559-83065578 MS.gene065045:intron 45.0%
! CTGATCCTTCTGGCACATTT+TGG + chr1.2:83065621-83065640 MS.gene065045:CDS 45.0%
! GGCACCTTTTGAACCATAAC+AGG + chr1.2:83065314-83065333 MS.gene065045:intron 45.0%
! TAGGGCAGATTTTCATCGAG+GGG + chr1.2:83063002-83063021 MS.gene065045:intron 45.0%
! TCATCCCTCTATCCCACTTT+TGG + chr1.2:83063455-83063474 MS.gene065045:intron 45.0%
! TTACACAAGAGGCTGTTTCC+AGG - chr1.2:83063087-83063106 None:intergenic 45.0%
! TTTTCATCGAGGGGTAACCT+TGG + chr1.2:83063011-83063030 MS.gene065045:intron 45.0%
!! AAAGAAGTGATGGGCGAAGA+TGG - chr1.2:83065015-83065034 None:intergenic 45.0%
!! ATCCCTCTATCCCACTTTTG+GGG + chr1.2:83063457-83063476 MS.gene065045:intron 45.0%
!! CATCCCTCTATCCCACTTTT+GGG + chr1.2:83063456-83063475 MS.gene065045:intron 45.0%
!! GCTATTGGTTCAGGATCAGA+AGG + chr1.2:83065659-83065678 MS.gene065045:CDS 45.0%
!!! AGTCAACACTTTTTCTCCCG+AGG + chr1.2:83062705-83062724 MS.gene065045:CDS 45.0%
!!! GTCAACACTTTTTCTCCCGA+GGG + chr1.2:83062706-83062725 MS.gene065045:CDS 45.0%
!!! AATTTTTTTTTGTTAATTTA+GGG + chr1.2:83062984-83063003 MS.gene065045:intron 5.0%
!!! TAATTTTTTTTTGTTAATTT+AGG + chr1.2:83062983-83063002 MS.gene065045:intron 5.0%
!!! TAATTTTTTTTTTTTTTTGT+TGG + chr1.2:83062849-83062868 MS.gene065045:intron 5.0%
AAATGTCCACAACCTTGCGG+TGG + chr1.2:83063599-83063618 MS.gene065045:intron 50.0%
AATGTCCACAACCTTGCGGT+GGG + chr1.2:83063600-83063619 MS.gene065045:intron 50.0%
ACCTGAAACAAACGTCCCTC+GGG - chr1.2:83062724-83062743 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG - chr1.2:83062531-83062550 None:intergenic 50.0%
AGGATGCAGACCCCATAATG+AGG + chr1.2:83066519-83066538 MS.gene065045:intron 50.0%
ATCACAGCTTCCACCTCAGA+CGG - chr1.2:83067128-83067147 None:intergenic 50.0%
ATTGCTGGCCATGACGAGAA+TGG + chr1.2:83064629-83064648 MS.gene065045:CDS 50.0%
CAACCCCAAAAGTGGGATAG+AGG - chr1.2:83063463-83063482 None:intergenic 50.0%
CAACTTTACCAGTTGCGCCA+AGG - chr1.2:83063031-83063050 None:intergenic 50.0%
CAGCTTGGATCAACTGCGAT+TGG + chr1.2:83062876-83062895 MS.gene065045:intron 50.0%
CCAACAACGTTGACATTGCC+AGG + chr1.2:83067075-83067094 MS.gene065045:CDS 50.0%
CCTGGCAATGTCAACGTTGT+TGG - chr1.2:83067078-83067097 None:intergenic 50.0%
CTTTGGCAGTCTCGACCATT+TGG + chr1.2:83064593-83064612 MS.gene065045:intron 50.0%
GAGAGAGAGAGAGAGAGGAA+AGG - chr1.2:83062528-83062547 None:intergenic 50.0%
GAGGGGAGTCAAATCACTAG+AGG - chr1.2:83066121-83066140 None:intergenic 50.0%
GCACATGTTTGTCTTGGTGG+TGG + chr1.2:83063515-83063534 MS.gene065045:intron 50.0%
GCGTAGTCAATCCTGCATTG+TGG - chr1.2:83063497-83063516 None:intergenic 50.0%
GCGTATTACTTCGCCTCTAC+TGG + chr1.2:83062938-83062957 MS.gene065045:CDS 50.0%
GGAAGGTGACGAAGAATCCA+TGG + chr1.2:83064155-83064174 MS.gene065045:CDS 50.0%
GGAGAGTAGATCAGATGGAG+GGG - chr1.2:83066138-83066157 None:intergenic 50.0%
GTCAATCCTGCATTGTGGTG+CGG - chr1.2:83063492-83063511 None:intergenic 50.0%
GTTAACTGCCCTCACCATAG+CGG - chr1.2:83063361-83063380 None:intergenic 50.0%
GTTTGTCAATAGCGCCGCTA+TGG + chr1.2:83063344-83063363 MS.gene065045:intron 50.0%
TATAGATGACGAACCCTCGC+TGG + chr1.2:83066255-83066274 MS.gene065045:intron 50.0%
TCAGTTTAGCAGTGCGGAGT+GGG + chr1.2:83063389-83063408 MS.gene065045:intron 50.0%
TCTCGTCATGGCCAGCAATA+AGG - chr1.2:83064628-83064647 None:intergenic 50.0%
TCTTTATACCCCGTCTGAGG+TGG + chr1.2:83067115-83067134 MS.gene065045:CDS 50.0%
TTAAGAGGGGTTACCAGCGA+GGG - chr1.2:83066271-83066290 None:intergenic 50.0%
! CACATTGGCTGTGCAATGAG+TGG + chr1.2:83063842-83063861 MS.gene065045:CDS 50.0%
! GCATGCACGAGTTGAAACTC+AGG + chr1.2:83063895-83063914 MS.gene065045:CDS 50.0%
! GGAGTGTCTCTCCTTATTGC+TGG + chr1.2:83064614-83064633 MS.gene065045:CDS 50.0%
AAGGTCACGGGTTCAAGTCC+TGG + chr1.2:83063066-83063085 MS.gene065045:intron 55.0%
AGTTTAGCAGTGCGGAGTGG+GGG + chr1.2:83063391-83063410 MS.gene065045:intron 55.0%
ATGATACGCTGGAGCAACCC+TGG - chr1.2:83067096-83067115 None:intergenic 55.0%
ATGTCCACAACCTTGCGGTG+GGG + chr1.2:83063601-83063620 MS.gene065045:intron 55.0%
CAATAGCGCCGCTATGGTGA+GGG + chr1.2:83063350-83063369 MS.gene065045:intron 55.0%
CAGTAGGGGGGACAAACAAC+TGG - chr1.2:83067007-83067026 None:intergenic 55.0%
CAGTTTAGCAGTGCGGAGTG+GGG + chr1.2:83063390-83063409 MS.gene065045:intron 55.0%
CATATGCAAGGTCCGGGAAG+GGG - chr1.2:83063150-83063169 None:intergenic 55.0%
CTGAAGCTCCCGCATATGCA+AGG - chr1.2:83063162-83063181 None:intergenic 55.0%
CTGCCCTAAAAAGGGCAACC+CGG - chr1.2:83063189-83063208 None:intergenic 55.0%
CTTAAGAGGGGTTACCAGCG+AGG - chr1.2:83066272-83066291 None:intergenic 55.0%
CTTCCCGGACCTTGCATATG+CGG + chr1.2:83063150-83063169 MS.gene065045:intron 55.0%
GAGCGGTCAACCCCAAAAGT+GGG - chr1.2:83063470-83063489 None:intergenic 55.0%
GCATATGCAAGGTCCGGGAA+GGG - chr1.2:83063151-83063170 None:intergenic 55.0%
GGCTAGGTCCATTCTCGTCA+TGG - chr1.2:83064640-83064659 None:intergenic 55.0%
GTCAGTTTAGCAGTGCGGAG+TGG + chr1.2:83063388-83063407 MS.gene065045:intron 55.0%
GTCTGCATCCTCTCCATTCG+AGG - chr1.2:83066510-83066529 None:intergenic 55.0%
TCAATAGCGCCGCTATGGTG+AGG + chr1.2:83063349-83063368 MS.gene065045:intron 55.0%
TCACAGCTTCCACCTCAGAC+GGG - chr1.2:83067127-83067146 None:intergenic 55.0%
TCCCGAGGGACGTTTGTTTC+AGG + chr1.2:83062720-83062739 MS.gene065045:CDS 55.0%
TTCCCGGACCTTGCATATGC+GGG + chr1.2:83063151-83063170 MS.gene065045:intron 55.0%
! GCACCGGGTTGCCCTTTTTA+GGG + chr1.2:83063183-83063202 MS.gene065045:intron 55.0%
! TGCACCGGGTTGCCCTTTTT+AGG + chr1.2:83063182-83063201 MS.gene065045:intron 55.0%
!! CTGGACCATTGGTCTTGCTG+AGG + chr1.2:83065570-83065589 MS.gene065045:intron 55.0%
!! GTGACCTAGCCTTGCGCTTT+GGG + chr1.2:83064133-83064152 MS.gene065045:CDS 55.0%
!! TGACCTAGCCTTGCGCTTTG+GGG + chr1.2:83064134-83064153 MS.gene065045:CDS 55.0%
!! TGTGACCTAGCCTTGCGCTT+TGG + chr1.2:83064132-83064151 MS.gene065045:CDS 55.0%
AGGGGTAACCTTGGCGCAAC+TGG + chr1.2:83063020-83063039 MS.gene065045:intron 60.0%
ATGCGGGAGCTTCAGTGCAC+CGG + chr1.2:83063167-83063186 MS.gene065045:intron 60.0%
CACAGCTTCCACCTCAGACG+GGG - chr1.2:83067126-83067145 None:intergenic 60.0%
CACTGCTGGGCTCCTGAAAG+TGG - chr1.2:83063796-83063815 None:intergenic 60.0%
CGCATATGCAAGGTCCGGGA+AGG - chr1.2:83063152-83063171 None:intergenic 60.0%
CTCCACAGTTGGAGAGGAGC+TGG - chr1.2:83065839-83065858 None:intergenic 60.0%
CTCCCGCATATGCAAGGTCC+GGG - chr1.2:83063156-83063175 None:intergenic 60.0%
CTTCCCCAAAGCGCAAGGCT+AGG - chr1.2:83064140-83064159 None:intergenic 60.0%
CTTTCAGGAGCCCAGCAGTG+TGG + chr1.2:83063796-83063815 MS.gene065045:intron 60.0%
GCTCCCGCATATGCAAGGTC+CGG - chr1.2:83063157-83063176 None:intergenic 60.0%
GGAGCGGTCAACCCCAAAAG+TGG - chr1.2:83063471-83063490 None:intergenic 60.0%
GTCACCTTCCCCAAAGCGCA+AGG - chr1.2:83064145-83064164 None:intergenic 60.0%
GTCCAGCTCCTCTCCAACTG+TGG + chr1.2:83065834-83065853 MS.gene065045:intron 60.0%
TCCTGCATTGTGGTGCGGAG+CGG - chr1.2:83063487-83063506 None:intergenic 60.0%
TGTCCACAACCTTGCGGTGG+GGG + chr1.2:83063602-83063621 MS.gene065045:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG + chr1.2:83063135-83063154 MS.gene065045:intron 60.0%
! TTTTGGTCACCCCCACCGCA+AGG - chr1.2:83063614-83063633 None:intergenic 60.0%
!! CTAGCCTTGCGCTTTGGGGA+AGG + chr1.2:83064138-83064157 MS.gene065045:CDS 60.0%
ACCGCTCCGCACCACAATGC+AGG + chr1.2:83063483-83063502 MS.gene065045:intron 65.0%
CGGGAAGGGGTCCCACCATT+TGG - chr1.2:83063137-83063156 None:intergenic 65.0%
TCACCCCCACCGCAAGGTTG+TGG - chr1.2:83063608-83063627 None:intergenic 65.0%
TGCGGGAGCTTCAGTGCACC+GGG + chr1.2:83063168-83063187 MS.gene065045:intron 65.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 83062504 83067160 83062504 ID=MS.gene065045
chr1.2 mRNA 83062504 83067160 83062504 ID=MS.gene065045.t1;Parent=MS.gene065045
chr1.2 exon 83062504 83062517 83062504 ID=MS.gene065045.t1.exon1;Parent=MS.gene065045.t1
chr1.2 CDS 83062504 83062517 83062504 ID=cds.MS.gene065045.t1;Parent=MS.gene065045.t1
chr1.2 exon 83062687 83062768 83062687 ID=MS.gene065045.t1.exon2;Parent=MS.gene065045.t1
chr1.2 CDS 83062687 83062768 83062687 ID=cds.MS.gene065045.t1;Parent=MS.gene065045.t1
chr1.2 exon 83062879 83062959 83062879 ID=MS.gene065045.t1.exon3;Parent=MS.gene065045.t1
chr1.2 CDS 83062879 83062959 83062879 ID=cds.MS.gene065045.t1;Parent=MS.gene065045.t1
chr1.2 exon 83063803 83063916 83063803 ID=MS.gene065045.t1.exon4;Parent=MS.gene065045.t1
chr1.2 CDS 83063803 83063916 83063803 ID=cds.MS.gene065045.t1;Parent=MS.gene065045.t1
chr1.2 exon 83064075 83064176 83064075 ID=MS.gene065045.t1.exon5;Parent=MS.gene065045.t1
chr1.2 CDS 83064075 83064176 83064075 ID=cds.MS.gene065045.t1;Parent=MS.gene065045.t1
chr1.2 exon 83064602 83064660 83064602 ID=MS.gene065045.t1.exon6;Parent=MS.gene065045.t1
chr1.2 CDS 83064602 83064660 83064602 ID=cds.MS.gene065045.t1;Parent=MS.gene065045.t1
chr1.2 exon 83065613 83065715 83065613 ID=MS.gene065045.t1.exon7;Parent=MS.gene065045.t1
chr1.2 CDS 83065613 83065715 83065613 ID=cds.MS.gene065045.t1;Parent=MS.gene065045.t1
chr1.2 exon 83066909 83066974 83066909 ID=MS.gene065045.t1.exon8;Parent=MS.gene065045.t1
chr1.2 CDS 83066909 83066974 83066909 ID=cds.MS.gene065045.t1;Parent=MS.gene065045.t1
chr1.2 exon 83067068 83067160 83067068 ID=MS.gene065045.t1.exon9;Parent=MS.gene065045.t1
chr1.2 CDS 83067068 83067160 83067068 ID=cds.MS.gene065045.t1;Parent=MS.gene065045.t1
Gene Sequence

>MS.gene065045

ATGTTTCTCACAAGGTTAAACCCTTTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTATCGCACAGATTTACATTTCTCTATTTTTCTCGATTTCGTTCATAATTTTCCCCAAATGTATTAGGATTTTTGTTTCTAGGTCTAATTAATTGCTATTCTGTGAATGAATTAGAACTGAGTATGACCGTGGAGTCAACACTTTTTCTCCCGAGGGACGTTTGTTTCAGGTTGAATATGCAATTGAAGCTATTAAGGTACTATGCCCTCTATTATTGTTATTATTATTATTATTATTAGGGTTTTTAACTATCTGTATTCGGGTTGGTGTGTTTGTTAATTTTTTTTTTTTTTTGTTGGATTTCAGCTTGGATCAACTGCGATTGGCTTGAAAACGAAAGAGGGTGTGGTTCTTGCTGTTGAAAAGCGTATTACTTCGCCTCTACTGGTATGTACCTATTCCCTTTTATGTAATTTTTTTTTGTTAATTTAGGGCAGATTTTCATCGAGGGGTAACCTTGGCGCAACTGGTAAAGTTGTTGTCATGTGACTGTAAGGTCACGGGTTCAAGTCCTGGAAACAGCCTCTTGTGTAAAAACAGGGTAAGGCTGCGTACAATACACCAAATGGTGGGACCCCTTCCCGGACCTTGCATATGCGGGAGCTTCAGTGCACCGGGTTGCCCTTTTTAGGGCAGATTTTCATCATCATATTGTGACACTACTGTTGCCCAAGTAAGAAATATATGCATGCAAAATATTGATTGATGTGTGACACAGATGTGTTTAGAATAAATTGAATTATGGGGATATCTGGTTGTTTTCTAGATCTAGTTTGTCAATAGCGCCGCTATGGTGAGGGCAGTTAACTATAACAGTCAGTTTAGCAGTGCGGAGTGGGGGTACTATTCATGTCATTTGTCCAACAAATTATCAAACAGCAGTCATCCCTCTATCCCACTTTTGGGGTTGACCGCTCCGCACCACAATGCAGGATTGACTACGCACATGTTTGTCTTGGTGGTGGATAGAAAGTGTATGTGCATTGCTTTAGAAGCTACAGTTTGTAGCTTGTGCAGTTCCATGTGAAATGTCCACAACCTTGCGGTGGGGGTGACCAAAACGCACATCCAAACGTGTTATACCCAGTTTTAGATGTAATTCTGAAGTTTGATTTTTTATGTTCATTTTACTTACAATGATTGCCGTGCTTATAGTCATATTTATTGTAAAAATAATGTTACTTACCATGAAACATACATTACAATTTTGTGTTAAAATTCCACTTTCAGGAGCCCAGCAGTGTGGAGAAAATTATGGAAATTGATGATCACATTGGCTGTGCAATGAGTGGATTGATTGCTGATGCTCGTACACTTGTTGAGCATGCACGAGTTGAAACTCAGGTATTATCATCTCTATAGAATAGAATGTTGTATGTAGTTGGATTTGTTTTTGATTGATATTGATCTATTTTGGTTTATTATAGAATGTTGTATGTAGTTGGATTTGATTTGTTAATGATTGATATTGATATTGATCTATTTTGGTTTATTTTTCACAGAATCACAGGTTCTCTTATGGTGAACCGATGACTGTAGAGTCTACAACTCAAGCTCTTTGTGACCTAGCCTTGCGCTTTGGGGAAGGTGACGAAGAATCCATGGTATATAACTTTTTAGCTTTGCTTTTTGTGACTATTTCAGTTTGATTGCTTACAGTGCTTTCTTTAAGGCCCAAAACCTGTGAACTTGCATGATCGCTTTTTATTTATAAATTTGCTAGAAATGTCAATGCCTTGTGTGTTGCATATTCTGAATGTTTAATGGAGATGTAAATAGAATTCTTGTTACTATATTTTGAGATGCACAAATATCCTAAACTTAAAATCTATTGTTGGATATTAAACATTCCTATGAAAGGATTAAGCCACTGTCCTTTTGTAAGGTGTTTTTTTATTAGTGTACAAATGGGTTTTGTTGCATGTGACGATAAACTTTTTTCTTTTGTAAAAGATACTTACTAGTGGTGTTGTTGGACAATATTGTGTATGCTGTATAACACATACCATTTATTTTTTCTCTTTGGCAGTCTCGACCATTTGGAGTGTCTCTCCTTATTGCTGGCCATGACGAGAATGGACCTAGCCTGTAAGTATATATTCCATCTAAGCCATGGTTACTTCTGAGTCATGTGATCAACTTGTCCTTTTGACTCATTTTCTGTGTTTGTCTGAATCTATGATATTGATATATTTTTTTTATTTGATGCCGTTGTTCCTTGTATGTTACACTTTCTTTTCTGGGGATTAGTTAAATTACAGAGAAAGGACATGTGGTGAAAAATATTTCAAGAACAGTCGCAATTTTTCTGGATATTCATATGCAAAGAGTGGTTAATGAGTGGATGTTAAAACATTTCTAAACCGGACATATTTGGCAAGAATTTTTTTCCTGTAATTTTCTCATTTTTGTTTCACTTGGTTCCTTGGAAGTAACATGCCATCTTCGCCCATCACTTCTTTCTTTTTTATTTCTTTTTCCTTTCTCAAAAGTATTTGTGAAGATCATTGCAATTATTTTGTAGTCATGTAGACCTTCACTCTTTCTTATTATTTCTTTAATGGTTTAAAGAGAATGATGCTATAGTTTTAGGAATACACATCCTACTCTTACCATTGATGTGTGCGTAAATACATCTTTTCTGTGCGGTTCTGCAGTCTACACTGCATTGTTCAACTCTCGGAGCAAAACATGTACTGATCTTTTAGTTTCTTGTTCAAACTAGTTCATGGTAGCAACTTGGCACCTTTTGAACCATAACAGGAAACATTTAGTGGTAGTTGGCATCTTACCCCCAATTAGGATTTGAGACTCAATTGTTAGCAATTTTCATATCCATTCCCATCACAGACAAATTAATGCAGATCATTGTTTAAACAGAAAATAATTGCACAGCATGGGTATTTTGATTTTGTAGGATCAGGCTCTATTAATTCAGCAGTCACTAGATGATACGGTTTAGTTTATTGCTGCTGATCATTTATTTCCCTTTTCATTCTGGACCATTGGTCTTGCTGAGGTTAAATGTTTTGATTTGCAGATATTACACTGATCCTTCTGGCACATTTTGGCAATGCAATGCAAAGGCTATTGGTTCAGGATCAGAAGGTGCTGACAGTTCTCTGCAAGAACAATTCAACAAGGTATCCATGTTCTTACAGTGGGTTGTTTCTTAATCTCTATTCTGCTTTCTGCTTATATCATTAAAATTATTAGCTGGGATGGTAAAGTGGAGAAGACTCTGAAAACACGTAAATAAGAGTCCAGCTCCTCTCCAACTGTGGAGAAAATGGAGATCTCCAGTCTCAAATTTAGTGCATGCAGATTCAAAACATGGCTAAAAAAAGAATTGCTGAGATTTATTTATTTTCAAATCATTTTATGTTTTTACAACAACAACCAAGCCTTATCTCACTAAGTGGAGTCGGCTACATGAATCGAACGATGCCATGATGTTCTATTGAAAAACCATGTCTTTCTCCAGCTTATTAATCTCTAGGTCCTTCTTAATAGTCTCGCTTATAGTTTTTCTAGGTCTTCCCCTACCTCTAGTGATTTGACTCCCCTCCATCTGATCTACTCTCCTTACTACAAAATCCATAGGTCTTCTCTCTACATGCCCAAACCACCTGAGTCTAATTTCTACCATCTTTCTACTATAGGTGCTGCCCCATCTTTCTACTATAGATGACGAACCCTCGCTGGTAACCCCTCTTAAGATCCTTTCTGCGTCTAAAAGAATTTGGGCTCTATTTGGAGAGTGAGCAACACAGAGATTAAAAAAATTAAAAGCAACTGAATGATGTAAAAAAATTCATACACTAGCTACTTTTTGTGTCTTTTTCACTCTAAATGAAGCGCTCCATTTGTTTTGAGAAATGGAGAGAATCTTAATTTGTTAAATAGATACACAAAATGGAGTTCTCCATTCTCTCCTCGAATGGAGAGGATGCAGACCCCATAATGAGGAGAGTTGTTACCTGGAATTCTTGGATCTATGCTGAGAAGAATGAAAACATGTTTTATGTTAATTGATTACCTTAATACTGTTGCAAATAACAATTTATATTAATTACCTTAATTCTTTGGGGTTTCGCCTATAAATCGTATTCAACTCTTGCCTACAAATCATATTGATATTCTCACATTTTTGTCCATCTCTTGTATATTTTTGTCTGGAGAATGTTGAAGTCATTAAGTGTTTTATAATTTAAAATGTTGTTGGAATTTCTGTTCGAGAACATGCAACATTTGCTTAAAGATTATCTTTCAGGATAGAGGCATCAAGATGACATGAAAACAAGTGAATTTGGTATTGATTTATTATGTTGTGCAGGACTTAACTCTTCAAGAAGCTGAGACTATTGCTTTATCAATTCTGAAGCAAGTTATGGAAGAGAAGGTAAAGTTAAAACCAAATGCATGTTACTTCCAGTTGTTTGTCCCCCCTACTGAGAATATATTCTAACTTGTTTCTTCTGTACTTTCGCATTAGGTCACTCCCAACAACGTTGACATTGCCAGGGTTGCTCCAGCGTATCATCTTTATACCCCGTCTGAGGTGGAAGCTGTGATAAGTCGCCTATGA
Protein sequence

>MS.gene065045.t1

MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAPAYHLYTPSEVEAVISRL