Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74962.t1 | XP_013470289.1 | 99.6 | 237 | 1 | 0 | 1 | 237 | 1 | 237 | 9.90E-128 | 466.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74962.t1 | Q9M4T8 | 97.9 | 237 | 5 | 0 | 1 | 237 | 1 | 237 | 1.3e-128 | 460.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74962.t1 | I3SSX1 | 99.6 | 237 | 1 | 0 | 1 | 237 | 1 | 237 | 7.1e-128 | 466.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74962.t1 | MTR_1g112250 | 99.578 | 237 | 1 | 0 | 1 | 237 | 1 | 237 | 2.29e-178 | 489 |
| MS.gene74962.t1 | MTR_6g013300 | 62.150 | 214 | 64 | 5 | 31 | 237 | 133 | 336 | 7.92e-75 | 230 |
| MS.gene74962.t1 | MTR_5g016590 | 42.324 | 241 | 121 | 7 | 8 | 236 | 5 | 239 | 8.17e-59 | 186 |
| MS.gene74962.t1 | MTR_7g070070 | 45.161 | 217 | 107 | 5 | 8 | 218 | 5 | 215 | 4.03e-58 | 184 |
| MS.gene74962.t1 | MTR_2g016050 | 39.914 | 233 | 130 | 5 | 6 | 234 | 2 | 228 | 7.92e-50 | 163 |
| MS.gene74962.t1 | MTR_8g075320 | 41.150 | 226 | 125 | 4 | 8 | 231 | 4 | 223 | 8.01e-50 | 163 |
| MS.gene74962.t1 | MTR_0167s0060 | 35.526 | 228 | 142 | 2 | 6 | 231 | 4 | 228 | 1.78e-47 | 157 |
| MS.gene74962.t1 | MTR_1g022410 | 46.154 | 182 | 93 | 2 | 3 | 184 | 1 | 177 | 4.10e-47 | 157 |
| MS.gene74962.t1 | MTR_8g464460 | 34.199 | 231 | 142 | 5 | 8 | 231 | 9 | 236 | 1.64e-40 | 139 |
| MS.gene74962.t1 | MTR_2g060830 | 32.900 | 231 | 145 | 5 | 8 | 231 | 9 | 236 | 1.02e-38 | 135 |
| MS.gene74962.t1 | MTR_6g024135 | 34.783 | 207 | 120 | 2 | 6 | 206 | 6 | 203 | 3.04e-38 | 134 |
| MS.gene74962.t1 | MTR_4g012740 | 32.127 | 221 | 105 | 4 | 3 | 184 | 232 | 446 | 1.88e-24 | 101 |
| MS.gene74962.t1 | MTR_4g057090 | 34.239 | 184 | 97 | 7 | 11 | 184 | 91 | 260 | 2.40e-17 | 80.1 |
| MS.gene74962.t1 | MTR_3g089040 | 28.313 | 166 | 107 | 3 | 34 | 196 | 54 | 210 | 1.81e-14 | 71.2 |
| MS.gene74962.t1 | MTR_5g006840 | 30.464 | 151 | 94 | 3 | 45 | 192 | 13 | 155 | 1.56e-12 | 64.7 |
| MS.gene74962.t1 | MTR_5g012470 | 28.249 | 177 | 114 | 4 | 42 | 213 | 10 | 178 | 1.75e-12 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74962.t1 | AT3G14290 | 97.046 | 237 | 7 | 0 | 1 | 237 | 1 | 237 | 3.69e-175 | 481 |
| MS.gene74962.t1 | AT1G53850 | 96.624 | 237 | 8 | 0 | 1 | 237 | 1 | 237 | 1.02e-174 | 479 |
| MS.gene74962.t1 | AT1G53850 | 96.624 | 237 | 8 | 0 | 1 | 237 | 1 | 237 | 1.02e-174 | 479 |
| MS.gene74962.t1 | AT3G22110 | 41.494 | 241 | 123 | 7 | 8 | 236 | 5 | 239 | 1.59e-56 | 181 |
| MS.gene74962.t1 | AT1G16470 | 35.088 | 228 | 143 | 2 | 6 | 231 | 4 | 228 | 1.77e-47 | 157 |
| MS.gene74962.t1 | AT1G16470 | 35.088 | 228 | 143 | 2 | 6 | 231 | 4 | 228 | 1.77e-47 | 157 |
| MS.gene74962.t1 | AT1G79210 | 34.188 | 234 | 149 | 2 | 6 | 237 | 4 | 234 | 1.78e-47 | 157 |
| MS.gene74962.t1 | AT1G79210 | 34.188 | 234 | 149 | 2 | 6 | 237 | 4 | 234 | 1.78e-47 | 157 |
| MS.gene74962.t1 | AT1G79210 | 34.188 | 234 | 149 | 2 | 6 | 237 | 4 | 234 | 1.78e-47 | 157 |
| MS.gene74962.t1 | AT5G66140 | 42.500 | 200 | 109 | 3 | 8 | 205 | 4 | 199 | 2.72e-47 | 157 |
| MS.gene74962.t1 | AT3G51260 | 41.791 | 201 | 111 | 3 | 7 | 205 | 3 | 199 | 8.25e-47 | 155 |
| MS.gene74962.t1 | AT3G51260 | 42.000 | 200 | 110 | 3 | 8 | 205 | 4 | 199 | 1.30e-46 | 155 |
| MS.gene74962.t1 | AT5G42790 | 39.506 | 243 | 125 | 4 | 3 | 234 | 1 | 232 | 1.50e-46 | 156 |
| MS.gene74962.t1 | AT1G47250 | 38.683 | 243 | 127 | 4 | 3 | 234 | 1 | 232 | 2.97e-46 | 155 |
| MS.gene74962.t1 | AT5G35590 | 35.498 | 231 | 139 | 5 | 8 | 231 | 9 | 236 | 3.04e-41 | 141 |
| MS.gene74962.t1 | AT2G27020 | 33.816 | 207 | 122 | 2 | 6 | 206 | 6 | 203 | 1.82e-38 | 134 |
| MS.gene74962.t1 | AT2G05840 | 34.434 | 212 | 132 | 4 | 8 | 215 | 9 | 217 | 2.53e-37 | 130 |
| MS.gene74962.t1 | AT2G05840 | 34.419 | 215 | 134 | 4 | 8 | 218 | 9 | 220 | 2.94e-37 | 131 |
| MS.gene74962.t1 | AT2G27020 | 33.816 | 207 | 122 | 2 | 6 | 206 | 108 | 305 | 2.99e-37 | 134 |
| MS.gene74962.t1 | AT4G15165 | 31.535 | 241 | 105 | 6 | 8 | 236 | 5 | 197 | 5.34e-35 | 124 |
| MS.gene74962.t1 | AT2G05840 | 35.263 | 190 | 118 | 3 | 8 | 195 | 9 | 195 | 5.79e-35 | 124 |
| MS.gene74962.t1 | AT3G26340 | 26.500 | 200 | 132 | 5 | 27 | 220 | 48 | 238 | 1.22e-14 | 71.6 |
| MS.gene74962.t1 | AT1G13060 | 25.654 | 191 | 129 | 4 | 34 | 220 | 57 | 238 | 1.64e-13 | 68.6 |
| MS.gene74962.t1 | AT4G14800 | 28.571 | 175 | 113 | 4 | 45 | 215 | 13 | 179 | 4.67e-12 | 63.5 |
| MS.gene74962.t1 | AT5G40580 | 25.616 | 203 | 141 | 3 | 31 | 231 | 36 | 230 | 4.76e-12 | 64.3 |
| MS.gene74962.t1 | AT5G40580 | 25.616 | 203 | 141 | 3 | 31 | 231 | 36 | 230 | 4.76e-12 | 64.3 |
| MS.gene74962.t1 | AT3G27430 | 26.108 | 203 | 140 | 3 | 31 | 231 | 36 | 230 | 9.15e-12 | 63.5 |
| MS.gene74962.t1 | AT3G27430 | 26.842 | 190 | 129 | 3 | 31 | 218 | 36 | 217 | 1.13e-11 | 63.2 |
| MS.gene74962.t1 | AT4G14800 | 28.495 | 186 | 121 | 4 | 45 | 218 | 13 | 198 | 1.24e-11 | 62.4 |
Find 53 sgRNAs with CRISPR-Local
Find 329 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGATCCTTCTGGCACATTT+TGG | 0.189061 | 1.3:+76113591 | MS.gene74962:CDS |
| TCCCGAAGGACGTTTGTTTC+AGG | 0.228080 | 1.3:+76110691 | MS.gene74962:CDS |
| GTGACCTAGCCTTGCGCTTT+GGG | 0.251856 | 1.3:+76112104 | MS.gene74962:CDS |
| ATATGCAATTGAAGCTATTA+AGG | 0.287746 | 1.3:+76110718 | MS.gene74962:CDS |
| CTTTGGCAGTCTCGACCATT+TGG | 0.312188 | 1.3:+76112564 | MS.gene74962:intron |
| GGAGTGTCTCTCCTTATTGC+TGG | 0.335194 | 1.3:+76112585 | MS.gene74962:CDS |
| TGTGACCTAGCCTTGCGCTT+TGG | 0.345737 | 1.3:+76112103 | MS.gene74962:CDS |
| CAGAATCACAGGTTCTCTTA+TGG | 0.347192 | 1.3:+76112043 | MS.gene74962:intron |
| CAATGCAATGCAAAGGCTAT+TGG | 0.347609 | 1.3:+76113614 | MS.gene74962:CDS |
| TCTCGTCATGGCCAGCAATA+AGG | 0.348529 | 1.3:-76112596 | None:intergenic |
| CAGCAGTGTGGAGAAAATTA+TGG | 0.366170 | 1.3:+76111779 | MS.gene74962:CDS |
| ATCAATTCTGAAGCAAGTTA+TGG | 0.388035 | 1.3:+76114916 | MS.gene74962:CDS |
| AACCTGAAACAAACGTCCTT+CGG | 0.394934 | 1.3:-76110693 | None:intergenic |
| CCAACAACGTTGACATTGCC+AGG | 0.408754 | 1.3:+76115046 | MS.gene74962:CDS |
| ACCTGAAACAAACGTCCTTC+GGG | 0.423347 | 1.3:-76110692 | None:intergenic |
| CCTGGCAATGTCAACGTTGT+TGG | 0.426746 | 1.3:-76115046 | None:intergenic |
| CAGCTTGGATCAACTGCGAT+TGG | 0.442542 | 1.3:+76110828 | MS.gene74962:intron |
| CTGGCAATGTCAACGTTGTT+GGG | 0.454160 | 1.3:-76115045 | None:intergenic |
| GCGTATTACTTCGCCTCTAC+TGG | 0.457074 | 1.3:+76110890 | MS.gene74962:CDS |
| AGATATTACACTGATCCTTC+TGG | 0.466365 | 1.3:+76113581 | MS.gene74962:intron |
| AATGCAAAGGCTATTGGTTC+AGG | 0.500036 | 1.3:+76113620 | MS.gene74962:CDS |
| CTAGCCTTGCGCTTTGGGGA+AGG | 0.509941 | 1.3:+76112109 | MS.gene74962:CDS |
| ATTGCTGGCCATGACGAGAA+TGG | 0.514622 | 1.3:+76112600 | MS.gene74962:CDS |
| GGAATATATACTTACAGGCT+AGG | 0.527284 | 1.3:-76112624 | None:intergenic |
| ATCACAGCTTCCACCTCAGA+CGG | 0.535599 | 1.3:-76115096 | None:intergenic |
| TCACAGCTTCCACCTCAGAC+GGG | 0.536535 | 1.3:-76115095 | None:intergenic |
| TCTTTATACCCCGTCTGAGG+TGG | 0.544181 | 1.3:+76115086 | MS.gene74962:CDS |
| CTTGAAAACGAAAGAGGGTG+TGG | 0.545014 | 1.3:+76110851 | MS.gene74962:CDS |
| ATGATACGCTGGAGCAACCC+TGG | 0.548475 | 1.3:-76115064 | None:intergenic |
| CTTCCCCAAAGCGCAAGGCT+AGG | 0.558153 | 1.3:-76112108 | None:intergenic |
| GAAGCAAGTTATGGAAGAGA+AGG | 0.568369 | 1.3:+76114925 | MS.gene74962:CDS |
| GGCTAGGTCCATTCTCGTCA+TGG | 0.580425 | 1.3:-76112608 | None:intergenic |
| ATAAGGAGAGACACTCCAAA+TGG | 0.589626 | 1.3:-76112579 | None:intergenic |
| TGACCTAGCCTTGCGCTTTG+GGG | 0.590485 | 1.3:+76112105 | MS.gene74962:CDS |
| ATCACCTTCCCCAAAGCGCA+AGG | 0.591699 | 1.3:-76112113 | None:intergenic |
| GCTATTGGTTCAGGATCAGA+AGG | 0.597231 | 1.3:+76113629 | MS.gene74962:CDS |
| GGAAGGTGATGAAGAATCCA+TGG | 0.599188 | 1.3:+76112126 | MS.gene74962:CDS |
| GTTGTAGACTCTACAGTCAT+CGG | 0.602200 | 1.3:-76112070 | None:intergenic |
| CACATTGGCTGTGCAATGAG+TGG | 0.606594 | 1.3:+76111813 | MS.gene74962:CDS |
| GATTGGCTTGAAAACGAAAG+AGG | 0.610207 | 1.3:+76110845 | MS.gene74962:CDS |
| CATTGCCAAAATGTGCCAGA+AGG | 0.618837 | 1.3:-76113596 | None:intergenic |
| AAACCAACATGTTTCTCACA+AGG | 0.620638 | 1.3:+76110491 | None:intergenic |
| ATGGAAATTGATGATCACAT+TGG | 0.621320 | 1.3:+76111798 | MS.gene74962:CDS |
| GAATAGGTACATACCAGTAG+AGG | 0.625077 | 1.3:-76110903 | None:intergenic |
| ATTGGCTTGAAAACGAAAGA+GGG | 0.626167 | 1.3:+76110846 | MS.gene74962:CDS |
| TCATCTTTATACCCCGTCTG+AGG | 0.634475 | 1.3:+76115083 | MS.gene74962:CDS |
| CAACAACGTTGACATTGCCA+GGG | 0.635659 | 1.3:+76115047 | MS.gene74962:CDS |
| CACAGCTTCCACCTCAGACG+GGG | 0.645540 | 1.3:-76115094 | None:intergenic |
| GGGGTATAAAGATGATACGC+TGG | 0.658506 | 1.3:-76115075 | None:intergenic |
| GCATGCACGAGTTGAAACTC+AGG | 0.662565 | 1.3:+76111866 | MS.gene74962:CDS |
| CTTTCAGGAGCCCAGCAGTG+TGG | 0.675944 | 1.3:+76111767 | MS.gene74962:intron |
| ATTAGAACTGAGTATGACCG+TGG | 0.689159 | 1.3:+76110653 | MS.gene74962:intron |
| TCTGCAAGAACAATTCAACA+AGG | 0.713271 | 1.3:+76113664 | MS.gene74962:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAAAAAAAAATTACATAAA+AGG | - | chr1.3:76110929-76110948 | None:intergenic | 10.0% |
| !!! | TTGTTAATTTTTTTTTTTGT+TGG | + | chr1.3:76110801-76110820 | MS.gene74962:intron | 10.0% |
| !!! | TTTAGAATAAATTGAATTAT+GGG | + | chr1.3:76111247-76111266 | MS.gene74962:intron | 10.0% |
| !!! | TTTATAATTTAAAATGTTGT+TGG | + | chr1.3:76114747-76114766 | MS.gene74962:intron | 10.0% |
| !! | ATATCATTAAAATTATTAGC+TGG | + | chr1.3:76113740-76113759 | MS.gene74962:intron | 15.0% |
| !! | ATTAATTACCTTAATTCTTT+GGG | + | chr1.3:76114612-76114631 | MS.gene74962:intron | 15.0% |
| !! | TATCATTAAAATTATTAGCT+GGG | + | chr1.3:76113741-76113760 | MS.gene74962:intron | 15.0% |
| !! | TATTAATTACCTTAATTCTT+TGG | + | chr1.3:76114611-76114630 | MS.gene74962:intron | 15.0% |
| !! | TTAGAATAAATTGAATTATG+GGG | + | chr1.3:76111248-76111267 | MS.gene74962:intron | 15.0% |
| !!! | ATATTGATATTGATCTATTT+TGG | + | chr1.3:76112009-76112028 | MS.gene74962:intron | 15.0% |
| !!! | CTTTCTTATTATTTCTTTAA+TGG | + | chr1.3:76113084-76113103 | MS.gene74962:intron | 15.0% |
| !!! | GTTTAGAATAAATTGAATTA+TGG | + | chr1.3:76111246-76111265 | MS.gene74962:intron | 15.0% |
| !!! | TTTTTTATTAGTGTACAAAT+GGG | + | chr1.3:76112433-76112452 | MS.gene74962:intron | 15.0% |
| !!! | TTTTTTTATTAGTGTACAAA+TGG | + | chr1.3:76112432-76112451 | MS.gene74962:intron | 15.0% |
| !! | AAAATTACATAAAAGGGAAT+AGG | - | chr1.3:76110922-76110941 | None:intergenic | 20.0% |
| !! | AAATTGTAATGTATGTTTCA+TGG | - | chr1.3:76111732-76111751 | None:intergenic | 20.0% |
| !! | AACAAAAATCCTAATACATT+TGG | - | chr1.3:76110600-76110619 | None:intergenic | 20.0% |
| !! | AACCCTAATAATAATAATAG+AGG | - | chr1.3:76110752-76110771 | None:intergenic | 20.0% |
| !! | AAGAGTTGAATATGATTTAT+AGG | - | chr1.3:76114644-76114663 | None:intergenic | 20.0% |
| !! | AATAAAAAAGAAAGAAGTGA+TGG | - | chr1.3:76112995-76113014 | None:intergenic | 20.0% |
| !! | AATAAATATGACTATAAGCA+CGG | - | chr1.3:76111690-76111709 | None:intergenic | 20.0% |
| !! | ACAAAAATCCTAATACATTT+GGG | - | chr1.3:76110599-76110618 | None:intergenic | 20.0% |
| !! | ACCCTAATAATAATAATAGA+GGG | - | chr1.3:76110751-76110770 | None:intergenic | 20.0% |
| !! | ATAAAAAAACACCTTACAAA+AGG | - | chr1.3:76112421-76112440 | None:intergenic | 20.0% |
| !! | ATAAAAAAGAAAGAAGTGAT+GGG | - | chr1.3:76112994-76113013 | None:intergenic | 20.0% |
| !! | ATATTAAACATTCCTATGAA+AGG | + | chr1.3:76112382-76112401 | MS.gene74962:intron | 20.0% |
| !! | ATGTTAAAACATTTCTAAAC+CGG | + | chr1.3:76112887-76112906 | MS.gene74962:intron | 20.0% |
| !! | ATTAGTTAAATTACAGAGAA+AGG | + | chr1.3:76112788-76112807 | MS.gene74962:intron | 20.0% |
| !! | CTAAACTTAAAATCTATTGT+TGG | + | chr1.3:76112359-76112378 | MS.gene74962:intron | 20.0% |
| !! | TGTTAAATAGATACACAAAA+TGG | + | chr1.3:76114439-76114458 | MS.gene74962:intron | 20.0% |
| !! | TTAATTACCTTAATTCTTTG+GGG | + | chr1.3:76114613-76114632 | MS.gene74962:intron | 20.0% |
| !!! | AGAATATCAATATGATTTGT+AGG | - | chr1.3:76114668-76114687 | None:intergenic | 20.0% |
| !!! | ATTTATTTCCTTTTTCATTC+TGG | + | chr1.3:76113521-76113540 | MS.gene74962:intron | 20.0% |
| !!! | CAACAATAGATTTTAAGTTT+AGG | - | chr1.3:76112361-76112380 | None:intergenic | 20.0% |
| !!! | TACCATTTATTTTTTCTCTT+TGG | + | chr1.3:76112547-76112566 | MS.gene74962:intron | 20.0% |
| !!! | TGATTGATATTGATCTATTT+TGG | + | chr1.3:76111938-76111957 | MS.gene74962:intron | 20.0% |
| ! | AAATTCTTGTCAAATATGTC+CGG | - | chr1.3:76112909-76112928 | None:intergenic | 25.0% |
| ! | AATAGAATGTTGTATGTAGT+TGG | + | chr1.3:76111906-76111925 | MS.gene74962:intron | 25.0% |
| ! | AGACAAAAATATACAAGAGA+TGG | - | chr1.3:76114702-76114721 | None:intergenic | 25.0% |
| ! | AGTTAGAATATATTCTCAGT+AGG | - | chr1.3:76114994-76115013 | None:intergenic | 25.0% |
| ! | ATATGCAATTGAAGCTATTA+AGG | + | chr1.3:76110718-76110737 | MS.gene74962:CDS | 25.0% |
| ! | ATTAAAATTATTAGCTGGGA+TGG | + | chr1.3:76113745-76113764 | MS.gene74962:intron | 25.0% |
| ! | CAAAAATCCTAATACATTTG+GGG | - | chr1.3:76110598-76110617 | None:intergenic | 25.0% |
| ! | CACACATATATTTCTTACTT+GGG | - | chr1.3:76111195-76111214 | None:intergenic | 25.0% |
| ! | GAAATAATAAGAAAGAGTGA+AGG | - | chr1.3:76113079-76113098 | None:intergenic | 25.0% |
| ! | GCCCTCTATTATTATTATTA+GGG | + | chr1.3:76110747-76110766 | MS.gene74962:intron | 25.0% |
| ! | GTTAGAATATATTCTCAGTA+GGG | - | chr1.3:76114993-76115012 | None:intergenic | 25.0% |
| ! | TAGATGGAATATATACTTAC+AGG | - | chr1.3:76112632-76112651 | None:intergenic | 25.0% |
| ! | TATAGAATGTTGTATGTAGT+TGG | + | chr1.3:76111966-76111985 | MS.gene74962:intron | 25.0% |
| ! | TCATCTATAGTAGAAAGATA+GGG | - | chr1.3:76114214-76114233 | None:intergenic | 25.0% |
| ! | TGCATATTCTGAATGTTTAA+TGG | + | chr1.3:76112288-76112307 | MS.gene74962:intron | 25.0% |
| ! | TGCCAAAGAGAAAAAATAAA+TGG | - | chr1.3:76112552-76112571 | None:intergenic | 25.0% |
| ! | TGCCCTCTATTATTATTATT+AGG | + | chr1.3:76110746-76110765 | MS.gene74962:intron | 25.0% |
| ! | TTAGAATATATTCTCAGTAG+GGG | - | chr1.3:76114992-76115011 | None:intergenic | 25.0% |
| ! | TTGCTTAAAGATTATCTTTC+AGG | + | chr1.3:76114796-76114815 | MS.gene74962:intron | 25.0% |
| ! | TTGTAAAAGATACTTACTAG+TGG | + | chr1.3:76112488-76112507 | MS.gene74962:intron | 25.0% |
| !! | AAAAGAAAGTGTAACATACA+AGG | - | chr1.3:76112762-76112781 | None:intergenic | 25.0% |
| !! | ATTGATTTATTATGTTGTGC+AGG | + | chr1.3:76114859-76114878 | MS.gene74962:intron | 25.0% |
| !! | TAATTTTCCCCAAATGTATT+AGG | + | chr1.3:76110588-76110607 | MS.gene74962:intron | 25.0% |
| !! | TATGTTACACTTTCTTTTCT+GGG | + | chr1.3:76112764-76112783 | MS.gene74962:intron | 25.0% |
| !! | TCAGAATTACATCTAAAACT+GGG | - | chr1.3:76111629-76111648 | None:intergenic | 25.0% |
| !! | TGTTATTTGCAACAGTATTA+AGG | - | chr1.3:76114586-76114605 | None:intergenic | 25.0% |
| !! | TTCAGAATTACATCTAAAAC+TGG | - | chr1.3:76111630-76111649 | None:intergenic | 25.0% |
| !!! | ATCTCTTGTATATTTTTGTC+TGG | + | chr1.3:76114701-76114720 | MS.gene74962:intron | 25.0% |
| !!! | GGTTTTTAACTATCTGTATT+CGG | + | chr1.3:76110768-76110787 | MS.gene74962:intron | 25.0% |
| !!! | GTATTAGGATTTTTGTTTCT+AGG | + | chr1.3:76110603-76110622 | MS.gene74962:intron | 25.0% |
| !!! | GTTTTTAACTATCTGTATTC+GGG | + | chr1.3:76110769-76110788 | MS.gene74962:intron | 25.0% |
| !!! | TATTTTGATTTTGTAGGATC+AGG | + | chr1.3:76113444-76113463 | MS.gene74962:intron | 25.0% |
| !!! | TTCACAAATACTTTTGAGAA+AGG | - | chr1.3:76113025-76113044 | None:intergenic | 25.0% |
| !!! | TTTATTTTTCACAGAATCAC+AGG | + | chr1.3:76112032-76112051 | MS.gene74962:intron | 25.0% |
| !!! | TTTCTCATTTTTGTTTCACT+TGG | + | chr1.3:76112941-76112960 | MS.gene74962:intron | 25.0% |
| AAAAGAATTTGGGCTCTATT+TGG | + | chr1.3:76114277-76114296 | MS.gene74962:intron | 30.0% | |
| AACACAGAAAATGAGTCAAA+AGG | - | chr1.3:76112691-76112710 | None:intergenic | 30.0% | |
| AAGATTATCTTTCAGGATAG+AGG | + | chr1.3:76114803-76114822 | MS.gene74962:intron | 30.0% | |
| AATTGAATTATGGGGATATC+TGG | + | chr1.3:76111256-76111275 | MS.gene74962:intron | 30.0% | |
| AGAAAATAATTGCACAGCAT+GGG | + | chr1.3:76113421-76113440 | MS.gene74962:intron | 30.0% | |
| AGCTAAGAAGTTATATACCA+TGG | - | chr1.3:76112146-76112165 | None:intergenic | 30.0% | |
| ATGAAAATCTGCCCTAAAAA+GGG | - | chr1.3:76111148-76111167 | None:intergenic | 30.0% | |
| ATTGAGTCTCAAATCCTAAT+TGG | - | chr1.3:76113340-76113359 | None:intergenic | 30.0% | |
| GACATGAAAACAAGTGAATT+TGG | + | chr1.3:76114835-76114854 | MS.gene74962:intron | 30.0% | |
| GCACACATATATTTCTTACT+TGG | - | chr1.3:76111196-76111215 | None:intergenic | 30.0% | |
| GTCATCTATAGTAGAAAGAT+AGG | - | chr1.3:76114215-76114234 | None:intergenic | 30.0% | |
| TAGAATATATTCTCAGTAGG+GGG | - | chr1.3:76114991-76115010 | None:intergenic | 30.0% | |
| TATAAGCGAGACTATTAAGA+AGG | - | chr1.3:76114047-76114066 | None:intergenic | 30.0% | |
| TATATATTCCATCTAAGCCA+TGG | + | chr1.3:76112637-76112656 | MS.gene74962:intron | 30.0% | |
| TCTCCATTTCTCAAAACAAA+TGG | - | chr1.3:76114408-76114427 | None:intergenic | 30.0% | |
| TGTGTTAAAATTCCACTTTC+AGG | + | chr1.3:76111752-76111771 | MS.gene74962:intron | 30.0% | |
| TTCTACCATCTTTCTACTAT+AGG | + | chr1.3:76114183-76114202 | MS.gene74962:intron | 30.0% | |
| TTCTGCGTCTAAAAGAATTT+GGG | + | chr1.3:76114267-76114286 | MS.gene74962:intron | 30.0% | |
| TTCTTGTTCAAACTAGTTCA+TGG | + | chr1.3:76113252-76113271 | MS.gene74962:intron | 30.0% | |
| TTGAGTCTCAAATCCTAATT+GGG | - | chr1.3:76113339-76113358 | None:intergenic | 30.0% | |
| TTTCTGCGTCTAAAAGAATT+TGG | + | chr1.3:76114266-76114285 | MS.gene74962:intron | 30.0% | |
| ! | AAATTCTTTTAGACGCAGAA+AGG | - | chr1.3:76114267-76114286 | None:intergenic | 30.0% |
| ! | ACTGCTGTTTGATAATTTGT+TGG | - | chr1.3:76111407-76111426 | None:intergenic | 30.0% |
| ! | ATGGAAATTGATGATCACAT+TGG | + | chr1.3:76111798-76111817 | MS.gene74962:CDS | 30.0% |
| ! | ATGTTACACTTTCTTTTCTG+GGG | + | chr1.3:76112765-76112784 | MS.gene74962:intron | 30.0% |
| ! | GAGAATGATGCTATAGTTTT+AGG | + | chr1.3:76113113-76113132 | MS.gene74962:intron | 30.0% |
| ! | GTAAATACATCTTTTCTGTG+CGG | + | chr1.3:76113169-76113188 | MS.gene74962:intron | 30.0% |
| ! | GTATGTTACACTTTCTTTTC+TGG | + | chr1.3:76112763-76112782 | MS.gene74962:intron | 30.0% |
| !! | ATCAATTCTGAAGCAAGTTA+TGG | + | chr1.3:76114916-76114935 | MS.gene74962:CDS | 30.0% |
| !! | GGTTTTTCAATAGAACATCA+CGG | - | chr1.3:76113993-76114012 | None:intergenic | 30.0% |
| !! | TGCATTAATTTGTCTGTGAT+GGG | - | chr1.3:76113386-76113405 | None:intergenic | 30.0% |
| !!! | CATGGGTATTTTGATTTTGT+AGG | + | chr1.3:76113438-76113457 | MS.gene74962:intron | 30.0% |
| !!! | TTTTTTGTTGGATTTCAGCT+TGG | + | chr1.3:76110813-76110832 | MS.gene74962:intron | 30.0% |
| AAAACTGGGTATAACACGTT+TGG | - | chr1.3:76111615-76111634 | None:intergenic | 35.0% | |
| AAACTGGGTATAACACGTTT+GGG | - | chr1.3:76111614-76111633 | None:intergenic | 35.0% | |
| AAATTAGACTCAGGTGGTTT+GGG | - | chr1.3:76114165-76114184 | None:intergenic | 35.0% | |
| AACTGGAAGTAACATGCATT+TGG | - | chr1.3:76114962-76114981 | None:intergenic | 35.0% | |
| AAGTTTGTGGACATTTCACA+TGG | - | chr1.3:76111566-76111585 | None:intergenic | 35.0% | |
| AATTACAGAGAAAGGACATG+TGG | + | chr1.3:76112796-76112815 | MS.gene74962:intron | 35.0% | |
| AGATATTACACTGATCCTTC+TGG | + | chr1.3:76113581-76113600 | MS.gene74962:intron | 35.0% | |
| AGATGGTAGAAATTAGACTC+AGG | - | chr1.3:76114174-76114193 | None:intergenic | 35.0% | |
| AGGAAACATTTAGTGGTAGT+TGG | + | chr1.3:76113304-76113323 | MS.gene74962:intron | 35.0% | |
| AGTCAAATCACTAGAGATAG+GGG | - | chr1.3:76114085-76114104 | None:intergenic | 35.0% | |
| CAGAAAATAATTGCACAGCA+TGG | + | chr1.3:76113420-76113439 | MS.gene74962:intron | 35.0% | |
| CATACAATACACCAAATGGT+GGG | + | chr1.3:76111064-76111083 | MS.gene74962:intron | 35.0% | |
| CATATAGATCCAAGAATTCC+AGG | - | chr1.3:76114525-76114544 | None:intergenic | 35.0% | |
| CATTATTAACCTCACCATAG+CGG | - | chr1.3:76111322-76111341 | None:intergenic | 35.0% | |
| CCAATAGTCCAGAATGAAAA+AGG | - | chr1.3:76113532-76113551 | None:intergenic | 35.0% | |
| CCACTAAATGTTTCCTGTTA+TGG | - | chr1.3:76113300-76113319 | None:intergenic | 35.0% | |
| CCATAACAGGAAACATTTAG+TGG | + | chr1.3:76113297-76113316 | MS.gene74962:intron | 35.0% | |
| CTCCTTACTACAAAATCCAT+AGG | + | chr1.3:76114124-76114143 | MS.gene74962:intron | 35.0% | |
| CTCTTCTGTACTTTCACATT+AGG | + | chr1.3:76115017-76115036 | MS.gene74962:intron | 35.0% | |
| GAGTCAAATCACTAGAGATA+GGG | - | chr1.3:76114086-76114105 | None:intergenic | 35.0% | |
| GATGAAAATCTGCCCTAAAA+AGG | - | chr1.3:76111149-76111168 | None:intergenic | 35.0% | |
| GGAATATATACTTACAGGCT+AGG | - | chr1.3:76112627-76112646 | None:intergenic | 35.0% | |
| GGATATTCATATGCAAAGAG+TGG | + | chr1.3:76112853-76112872 | MS.gene74962:intron | 35.0% | |
| GTAACAACTCTCCTCATTAT+GGG | - | chr1.3:76114503-76114522 | None:intergenic | 35.0% | |
| GTGTAACATACAAGGAACAA+CGG | - | chr1.3:76112754-76112773 | None:intergenic | 35.0% | |
| GTTTCCTGTTATGGTTCAAA+AGG | - | chr1.3:76113291-76113310 | None:intergenic | 35.0% | |
| TAACAACTCTCCTCATTATG+GGG | - | chr1.3:76114502-76114521 | None:intergenic | 35.0% | |
| TAATAAGCTGGAGAAAGACA+TGG | - | chr1.3:76114014-76114033 | None:intergenic | 35.0% | |
| TCTCCAGCTTATTAATCTCT+AGG | + | chr1.3:76114020-76114039 | MS.gene74962:intron | 35.0% | |
| TCTGCAAGAACAATTCAACA+AGG | + | chr1.3:76113664-76113683 | MS.gene74962:CDS | 35.0% | |
| TCTTGTGTAAAAACAGGGTA+AGG | + | chr1.3:76111038-76111057 | MS.gene74962:intron | 35.0% | |
| TGAGTCTCAAATCCTAATTG+GGG | - | chr1.3:76113338-76113357 | None:intergenic | 35.0% | |
| TGCTTACAGTGCTTTCTTTA+AGG | + | chr1.3:76112194-76112213 | MS.gene74962:intron | 35.0% | |
| TGTATTTACGCACACATCAA+TGG | - | chr1.3:76113158-76113177 | None:intergenic | 35.0% | |
| TTAACTATCTGTATTCGGGT+TGG | + | chr1.3:76110773-76110792 | MS.gene74962:intron | 35.0% | |
| TTCAGAATATGCAACACACA+AGG | - | chr1.3:76112281-76112300 | None:intergenic | 35.0% | |
| ! | AAGAACAGTCGCAATTTTTC+TGG | + | chr1.3:76112832-76112851 | MS.gene74962:intron | 35.0% |
| ! | ATAATTTTCTCCACACTGCT+GGG | - | chr1.3:76111780-76111799 | None:intergenic | 35.0% |
| ! | GACCTATGGATTTTGTAGTA+AGG | - | chr1.3:76114129-76114148 | None:intergenic | 35.0% |
| ! | GTCTCGCTTATAGTTTTTCT+AGG | + | chr1.3:76114055-76114074 | MS.gene74962:intron | 35.0% |
| ! | TAATTTGTCTGTGATGGGAA+TGG | - | chr1.3:76113381-76113400 | None:intergenic | 35.0% |
| !! | ATACTTACTAGTGGTGTTGT+TGG | + | chr1.3:76112497-76112516 | MS.gene74962:intron | 35.0% |
| !! | ATTGGCTTGAAAACGAAAGA+GGG | + | chr1.3:76110846-76110865 | MS.gene74962:CDS | 35.0% |
| !! | ATTTTGGCAATGCAATGCAA+AGG | + | chr1.3:76113607-76113626 | MS.gene74962:CDS | 35.0% |
| !! | CCTTTTTCATTCTGGACTAT+TGG | + | chr1.3:76113529-76113548 | MS.gene74962:intron | 35.0% |
| !! | CTGCATTAATTTGTCTGTGA+TGG | - | chr1.3:76113387-76113406 | None:intergenic | 35.0% |
| !! | TTTTGTTTCACTTGGTTCCT+TGG | + | chr1.3:76112949-76112968 | MS.gene74962:intron | 35.0% |
| !!! | ACCCTTTTTTGCCCTTTTTA+GGG | + | chr1.3:76111134-76111153 | MS.gene74962:intron | 35.0% |
| !!! | GCTCCATTTGTTTTGAGAAA+TGG | + | chr1.3:76114402-76114421 | MS.gene74962:intron | 35.0% |
| !!! | TACCCTTTTTTGCCCTTTTT+AGG | + | chr1.3:76111133-76111152 | MS.gene74962:intron | 35.0% |
| !!! | TTACCCTGTTTTTACACAAG+AGG | - | chr1.3:76111039-76111058 | None:intergenic | 35.0% |
| AACAACCCACTGTAAGAACA+TGG | - | chr1.3:76113693-76113712 | None:intergenic | 40.0% | |
| AACACCTTACAAAAGGACAG+TGG | - | chr1.3:76112414-76112433 | None:intergenic | 40.0% | |
| AACCTGAAACAAACGTCCTT+CGG | - | chr1.3:76110696-76110715 | None:intergenic | 40.0% | |
| ACACTGCATTGTTCAACTCT+CGG | + | chr1.3:76113203-76113222 | MS.gene74962:intron | 40.0% | |
| ACAGCCTCTTGTGTAAAAAC+AGG | + | chr1.3:76111032-76111051 | MS.gene74962:intron | 40.0% | |
| ACATGACTCAGAAGTAACCA+TGG | - | chr1.3:76112657-76112676 | None:intergenic | 40.0% | |
| ACGCAGAAAGGATCTTAAGA+GGG | - | chr1.3:76114255-76114274 | None:intergenic | 40.0% | |
| ACTAGTTCATGGTAGCAACA+TGG | + | chr1.3:76113263-76113282 | MS.gene74962:intron | 40.0% | |
| AGAAGTAACCATGGCTTAGA+TGG | - | chr1.3:76112648-76112667 | None:intergenic | 40.0% | |
| AGGTATCCATGTTCTTACAG+TGG | + | chr1.3:76113684-76113703 | MS.gene74962:intron | 40.0% | |
| AGTAAGGAGAGTAGATCAGA+TGG | - | chr1.3:76114113-76114132 | None:intergenic | 40.0% | |
| ATAACGTCAGTTTAGCAGTG+CGG | + | chr1.3:76111354-76111373 | MS.gene74962:intron | 40.0% | |
| ATAAGGAGAGACACTCCAAA+TGG | - | chr1.3:76112582-76112601 | None:intergenic | 40.0% | |
| ATTAGAACTGAGTATGACCG+TGG | + | chr1.3:76110653-76110672 | MS.gene74962:intron | 40.0% | |
| CAATGCAATGCAAAGGCTAT+TGG | + | chr1.3:76113614-76113633 | MS.gene74962:CDS | 40.0% | |
| CACACATCAATGGTAAGAGT+AGG | - | chr1.3:76113148-76113167 | None:intergenic | 40.0% | |
| CAGAATCACAGGTTCTCTTA+TGG | + | chr1.3:76112043-76112062 | MS.gene74962:intron | 40.0% | |
| CAGCACCTATAGTAGAAAGA+TGG | - | chr1.3:76114191-76114210 | None:intergenic | 40.0% | |
| CAGCAGTGTGGAGAAAATTA+TGG | + | chr1.3:76111779-76111798 | MS.gene74962:CDS | 40.0% | |
| CAGCCTCTTGTGTAAAAACA+GGG | + | chr1.3:76111033-76111052 | MS.gene74962:intron | 40.0% | |
| CAGTGGCTTAATCCTTTCAT+AGG | - | chr1.3:76112397-76112416 | None:intergenic | 40.0% | |
| CGCTATGGTGAGGTTAATAA+TGG | + | chr1.3:76111320-76111339 | MS.gene74962:intron | 40.0% | |
| CTTATCTCACTAAGTGGAGT+CGG | + | chr1.3:76113948-76113967 | MS.gene74962:intron | 40.0% | |
| GAAATTAGACTCAGGTGGTT+TGG | - | chr1.3:76114166-76114185 | None:intergenic | 40.0% | |
| GAAGCAAGTTATGGAAGAGA+AGG | + | chr1.3:76114925-76114944 | MS.gene74962:CDS | 40.0% | |
| GAATAGGTACATACCAGTAG+AGG | - | chr1.3:76110906-76110925 | None:intergenic | 40.0% | |
| GAGTCTCAAATCCTAATTGG+GGG | - | chr1.3:76113337-76113356 | None:intergenic | 40.0% | |
| GAGTTGTTACCTGGAATTCT+TGG | + | chr1.3:76114513-76114532 | MS.gene74962:intron | 40.0% | |
| GATAAAAGAGAGAGAGAGAG+AGG | - | chr1.3:76110528-76110547 | None:intergenic | 40.0% | |
| GCATACAATACACCAAATGG+TGG | + | chr1.3:76111063-76111082 | MS.gene74962:intron | 40.0% | |
| GCCCTAAAAAGGGCAAAAAA+GGG | - | chr1.3:76111138-76111157 | None:intergenic | 40.0% | |
| GCTGCATACAATACACCAAA+TGG | + | chr1.3:76111060-76111079 | MS.gene74962:intron | 40.0% | |
| GGACCTAGAGATTAATAAGC+TGG | - | chr1.3:76114026-76114045 | None:intergenic | 40.0% | |
| GGAGTCAAATCACTAGAGAT+AGG | - | chr1.3:76114087-76114106 | None:intergenic | 40.0% | |
| GGTAACAACTCTCCTCATTA+TGG | - | chr1.3:76114504-76114523 | None:intergenic | 40.0% | |
| GGTATCCATGTTCTTACAGT+GGG | + | chr1.3:76113685-76113704 | MS.gene74962:intron | 40.0% | |
| GTGAAATGTCCACAAACTTG+CGG | + | chr1.3:76111567-76111586 | MS.gene74962:intron | 40.0% | |
| GTGCATGCAGATTCAAAACA+TGG | + | chr1.3:76113857-76113876 | MS.gene74962:intron | 40.0% | |
| GTTGTAGACTCTACAGTCAT+CGG | - | chr1.3:76112073-76112092 | None:intergenic | 40.0% | |
| TAATGAGGAGAGTTGTTACC+TGG | + | chr1.3:76114504-76114523 | MS.gene74962:intron | 40.0% | |
| TATTAGCTGGGATGGTAAAG+TGG | + | chr1.3:76113753-76113772 | MS.gene74962:intron | 40.0% | |
| TCAGCAGTCACTAGATGATA+CGG | + | chr1.3:76113477-76113496 | MS.gene74962:intron | 40.0% | |
| TGCAAAGAGTGGTTAATGAG+TGG | + | chr1.3:76112864-76112883 | MS.gene74962:intron | 40.0% | |
| TGCCCTAAAAAGGGCAAAAA+AGG | - | chr1.3:76111139-76111158 | None:intergenic | 40.0% | |
| TGGTAGAAATTAGACTCAGG+TGG | - | chr1.3:76114171-76114190 | None:intergenic | 40.0% | |
| ! | AAGATGGCATGTTACTTCCA+AGG | - | chr1.3:76112969-76112988 | None:intergenic | 40.0% |
| ! | ATCTCCATTTTCTCCACAGT+TGG | - | chr1.3:76113820-76113839 | None:intergenic | 40.0% |
| ! | CATAATTTTCTCCACACTGC+TGG | - | chr1.3:76111781-76111800 | None:intergenic | 40.0% |
| ! | CATGCAAGTTCACAGGTTTT+GGG | - | chr1.3:76112220-76112239 | None:intergenic | 40.0% |
| ! | GCATGCACTAAATTTGAGAC+TGG | - | chr1.3:76113845-76113864 | None:intergenic | 40.0% |
| ! | TAAGCCACTGTCCTTTTGTA+AGG | + | chr1.3:76112407-76112426 | MS.gene74962:intron | 40.0% |
| ! | TCATGCAAGTTCACAGGTTT+TGG | - | chr1.3:76112221-76112240 | None:intergenic | 40.0% |
| ! | TTAGGGCAGATTTTCATCGA+GGG | + | chr1.3:76110954-76110973 | MS.gene74962:intron | 40.0% |
| !! | AATGCAAAGGCTATTGGTTC+AGG | + | chr1.3:76113620-76113639 | MS.gene74962:CDS | 40.0% |
| !! | GAGAAAAAGTGTTGACTCCA+CGG | - | chr1.3:76110673-76110692 | None:intergenic | 40.0% |
| !! | GATTGGCTTGAAAACGAAAG+AGG | + | chr1.3:76110845-76110864 | MS.gene74962:CDS | 40.0% |
| !! | TTTAGGGCAGATTTTCATCG+AGG | + | chr1.3:76110953-76110972 | MS.gene74962:intron | 40.0% |
| AAATGTCCACAAACTTGCGG+TGG | + | chr1.3:76111570-76111589 | MS.gene74962:intron | 45.0% | |
| AACCCCAAAAGTGGGATAGA+GGG | - | chr1.3:76111433-76111452 | None:intergenic | 45.0% | |
| AAGAGAGAGAGAGAGAGGAA+AGG | - | chr1.3:76110523-76110542 | None:intergenic | 45.0% | |
| AAGCGATCATGCAAGTTCAC+AGG | - | chr1.3:76112227-76112246 | None:intergenic | 45.0% | |
| AAGGAGAGTAGATCAGATGG+AGG | - | chr1.3:76114110-76114129 | None:intergenic | 45.0% | |
| AAGGGCAAAAAAGGGTAACC+CGG | - | chr1.3:76111130-76111149 | None:intergenic | 45.0% | |
| AATGTCCACAAACTTGCGGT+GGG | + | chr1.3:76111571-76111590 | MS.gene74962:intron | 45.0% | |
| ACCTGAAACAAACGTCCTTC+GGG | - | chr1.3:76110695-76110714 | None:intergenic | 45.0% | |
| AGAGAGAGAGAGAGAGGAAA+GGG | - | chr1.3:76110522-76110541 | None:intergenic | 45.0% | |
| AGGAGAGTAGATCAGATGGA+GGG | - | chr1.3:76114109-76114128 | None:intergenic | 45.0% | |
| CAACAACGTTGACATTGCCA+GGG | + | chr1.3:76115047-76115066 | MS.gene74962:CDS | 45.0% | |
| CATTGCCAAAATGTGCCAGA+AGG | - | chr1.3:76113599-76113618 | None:intergenic | 45.0% | |
| CCACTTAGTGAGATAAGGCT+TGG | - | chr1.3:76113945-76113964 | None:intergenic | 45.0% | |
| CGACTCCACTTAGTGAGATA+AGG | - | chr1.3:76113950-76113969 | None:intergenic | 45.0% | |
| CGCAGAAAGGATCTTAAGAG+GGG | - | chr1.3:76114254-76114273 | None:intergenic | 45.0% | |
| CTCTCCAACTGTGGAGAAAA+TGG | + | chr1.3:76113813-76113832 | MS.gene74962:intron | 45.0% | |
| CTGGCAATGTCAACGTTGTT+GGG | - | chr1.3:76115048-76115067 | None:intergenic | 45.0% | |
| CTTGAAAACGAAAGAGGGTG+TGG | + | chr1.3:76110851-76110870 | MS.gene74962:CDS | 45.0% | |
| GACGCAGAAAGGATCTTAAG+AGG | - | chr1.3:76114256-76114275 | None:intergenic | 45.0% | |
| GACTACGCACATGTTTGTCT+TGG | + | chr1.3:76111480-76111499 | MS.gene74962:intron | 45.0% | |
| GCAACTGGTATGTGACTGTA+AGG | + | chr1.3:76110988-76111007 | MS.gene74962:intron | 45.0% | |
| GCATGTAGAGAGAAGACCTA+TGG | - | chr1.3:76114143-76114162 | None:intergenic | 45.0% | |
| GGAAGGTGATGAAGAATCCA+TGG | + | chr1.3:76112126-76112145 | MS.gene74962:CDS | 45.0% | |
| GGCGAAACCCCAAAGAATTA+AGG | - | chr1.3:76114623-76114642 | None:intergenic | 45.0% | |
| GGGGTATAAAGATGATACGC+TGG | - | chr1.3:76115078-76115097 | None:intergenic | 45.0% | |
| GGTATGTGACTGTAAGGTCA+CGG | + | chr1.3:76110994-76111013 | MS.gene74962:intron | 45.0% | |
| GTATGTGACTGTAAGGTCAC+GGG | + | chr1.3:76110995-76111014 | MS.gene74962:intron | 45.0% | |
| TACGCACATGTTTGTCTTGG+TGG | + | chr1.3:76111483-76111502 | MS.gene74962:intron | 45.0% | |
| TCATCTTTATACCCCGTCTG+AGG | + | chr1.3:76115083-76115102 | MS.gene74962:CDS | 45.0% | |
| TTCTCCATTCTCTCCTCGAA+TGG | + | chr1.3:76114464-76114483 | MS.gene74962:intron | 45.0% | |
| TTGGCATCTTACCCCCAATT+AGG | + | chr1.3:76113323-76113342 | MS.gene74962:intron | 45.0% | |
| ! | CATTTTCTCCACAGTTGGAG+AGG | - | chr1.3:76113815-76113834 | None:intergenic | 45.0% |
| ! | CCAAGCCTTATCTCACTAAG+TGG | + | chr1.3:76113942-76113961 | MS.gene74962:intron | 45.0% |
| ! | CTGATCCTTCTGGCACATTT+TGG | + | chr1.3:76113591-76113610 | MS.gene74962:CDS | 45.0% |
| ! | GGCACCTTTTGAACCATAAC+AGG | + | chr1.3:76113284-76113303 | MS.gene74962:intron | 45.0% |
| ! | TAGGGCAGATTTTCATCGAG+GGG | + | chr1.3:76110955-76110974 | MS.gene74962:intron | 45.0% |
| ! | TCATCCCTCTATCCCACTTT+TGG | + | chr1.3:76111426-76111445 | MS.gene74962:intron | 45.0% |
| ! | TTACACAAGAGGCTGTTTCC+AGG | - | chr1.3:76111028-76111047 | None:intergenic | 45.0% |
| ! | TTTTCATCGAGGGGTAACCT+TGG | + | chr1.3:76110964-76110983 | MS.gene74962:intron | 45.0% |
| !! | AAAGAAGTGATGGGCGAAGA+TGG | - | chr1.3:76112985-76113004 | None:intergenic | 45.0% |
| !! | ATCCCTCTATCCCACTTTTG+GGG | + | chr1.3:76111428-76111447 | MS.gene74962:intron | 45.0% |
| !! | CATCCCTCTATCCCACTTTT+GGG | + | chr1.3:76111427-76111446 | MS.gene74962:intron | 45.0% |
| !! | GCTATTGGTTCAGGATCAGA+AGG | + | chr1.3:76113629-76113648 | MS.gene74962:CDS | 45.0% |
| !!! | GTCAACACTTTTTCTCCCGA+AGG | + | chr1.3:76110677-76110696 | MS.gene74962:CDS | 45.0% |
| !! | AAAAAAAAAATTACATAAAA+GGG | - | chr1.3:76110928-76110947 | None:intergenic | 5.0% |
| !!! | AATTTTTTTTTTGTTAATTT+AGG | + | chr1.3:76110936-76110955 | MS.gene74962:intron | 5.0% |
| !!! | ATTTTTTTTTTGTTAATTTA+GGG | + | chr1.3:76110937-76110956 | MS.gene74962:intron | 5.0% |
| AAAATAGCGCCGCTATGGTG+AGG | + | chr1.3:76111310-76111329 | MS.gene74962:intron | 50.0% | |
| ACTAAGTGGAGTCGGCTACA+TGG | + | chr1.3:76113956-76113975 | MS.gene74962:intron | 50.0% | |
| ATCACAGCTTCCACCTCAGA+CGG | - | chr1.3:76115099-76115118 | None:intergenic | 50.0% | |
| ATGTCCACAAACTTGCGGTG+GGG | + | chr1.3:76111572-76111591 | MS.gene74962:intron | 50.0% | |
| ATTGCTGGCCATGACGAGAA+TGG | + | chr1.3:76112600-76112619 | MS.gene74962:CDS | 50.0% | |
| CAACCCCAAAAGTGGGATAG+AGG | - | chr1.3:76111434-76111453 | None:intergenic | 50.0% | |
| CAGCTTGGATCAACTGCGAT+TGG | + | chr1.3:76110828-76110847 | MS.gene74962:intron | 50.0% | |
| CATTCTCTCCTCGAATGGAG+AGG | + | chr1.3:76114469-76114488 | MS.gene74962:intron | 50.0% | |
| CCAACAACGTTGACATTGCC+AGG | + | chr1.3:76115046-76115065 | MS.gene74962:CDS | 50.0% | |
| CCTGGCAATGTCAACGTTGT+TGG | - | chr1.3:76115049-76115068 | None:intergenic | 50.0% | |
| CTCTCCATTCGAGGAGAGAA+TGG | - | chr1.3:76114471-76114490 | None:intergenic | 50.0% | |
| CTTTGGCAGTCTCGACCATT+TGG | + | chr1.3:76112564-76112583 | MS.gene74962:intron | 50.0% | |
| GCACATGTTTGTCTTGGTGG+TGG | + | chr1.3:76111486-76111505 | MS.gene74962:intron | 50.0% | |
| GCGTATTACTTCGCCTCTAC+TGG | + | chr1.3:76110890-76110909 | MS.gene74962:CDS | 50.0% | |
| GGAGAGTAGATCAGATGGAG+GGG | - | chr1.3:76114108-76114127 | None:intergenic | 50.0% | |
| TATAGATGACGAACCCTCGC+TGG | + | chr1.3:76114225-76114244 | MS.gene74962:intron | 50.0% | |
| TCAGTAGGGGGACAAACAAC+TGG | - | chr1.3:76114979-76114998 | None:intergenic | 50.0% | |
| TCAGTTTAGCAGTGCGGAGT+GGG | + | chr1.3:76111360-76111379 | MS.gene74962:intron | 50.0% | |
| TCCCGAAGGACGTTTGTTTC+AGG | + | chr1.3:76110691-76110710 | MS.gene74962:CDS | 50.0% | |
| TCTCGTCATGGCCAGCAATA+AGG | - | chr1.3:76112599-76112618 | None:intergenic | 50.0% | |
| TCTTTATACCCCGTCTGAGG+TGG | + | chr1.3:76115086-76115105 | MS.gene74962:CDS | 50.0% | |
| ! | ACACGTTTGGGTGTGCGTTT+TGG | - | chr1.3:76111602-76111621 | None:intergenic | 50.0% |
| ! | CACATTGGCTGTGCAATGAG+TGG | + | chr1.3:76111813-76111832 | MS.gene74962:CDS | 50.0% |
| ! | GCATGCACGAGTTGAAACTC+AGG | + | chr1.3:76111866-76111885 | MS.gene74962:CDS | 50.0% |
| ! | GGAGTGTCTCTCCTTATTGC+TGG | + | chr1.3:76112585-76112604 | MS.gene74962:CDS | 50.0% |
| !! | CTGGACTATTGGTCTTGCTG+AGG | + | chr1.3:76113540-76113559 | MS.gene74962:intron | 50.0% |
| AAGGTCACGGGTTCAAGTCC+TGG | + | chr1.3:76111007-76111026 | MS.gene74962:intron | 55.0% | |
| AGCGCAAAATAGCGCCGCTA+TGG | + | chr1.3:76111305-76111324 | MS.gene74962:intron | 55.0% | |
| AGTTTAGCAGTGCGGAGTGG+GGG | + | chr1.3:76111362-76111381 | MS.gene74962:intron | 55.0% | |
| ATCACCTTCCCCAAAGCGCA+AGG | - | chr1.3:76112116-76112135 | None:intergenic | 55.0% | |
| ATGATACGCTGGAGCAACCC+TGG | - | chr1.3:76115067-76115086 | None:intergenic | 55.0% | |
| CAGTTTAGCAGTGCGGAGTG+GGG | + | chr1.3:76111361-76111380 | MS.gene74962:intron | 55.0% | |
| GAGCGGTCAACCCCAAAAGT+GGG | - | chr1.3:76111441-76111460 | None:intergenic | 55.0% | |
| GCGTAGTCAATCCTGCATCG+TGG | - | chr1.3:76111468-76111487 | None:intergenic | 55.0% | |
| GGCTAGGTCCATTCTCGTCA+TGG | - | chr1.3:76112611-76112630 | None:intergenic | 55.0% | |
| GTCAATCCTGCATCGTGGTG+CGG | - | chr1.3:76111463-76111482 | None:intergenic | 55.0% | |
| GTCACATACCAGTTGCGCCA+AGG | - | chr1.3:76110984-76111003 | None:intergenic | 55.0% | |
| GTCAGTTTAGCAGTGCGGAG+TGG | + | chr1.3:76111359-76111378 | MS.gene74962:intron | 55.0% | |
| TCACAGCTTCCACCTCAGAC+GGG | - | chr1.3:76115098-76115117 | None:intergenic | 55.0% | |
| TGTCCACAAACTTGCGGTGG+GGG | + | chr1.3:76111573-76111592 | MS.gene74962:intron | 55.0% | |
| TTAAGAGGGGTGACCAGCGA+GGG | - | chr1.3:76114241-76114260 | None:intergenic | 55.0% | |
| !! | GTGACCTAGCCTTGCGCTTT+GGG | + | chr1.3:76112104-76112123 | MS.gene74962:CDS | 55.0% |
| !! | TGACCTAGCCTTGCGCTTTG+GGG | + | chr1.3:76112105-76112124 | MS.gene74962:CDS | 55.0% |
| !! | TGTGACCTAGCCTTGCGCTT+TGG | + | chr1.3:76112103-76112122 | MS.gene74962:CDS | 55.0% |
| ACTGAAGCTCCCGCATACGC+AGG | - | chr1.3:76111104-76111123 | None:intergenic | 60.0% | |
| AGGGGTAACCTTGGCGCAAC+TGG | + | chr1.3:76110973-76110992 | MS.gene74962:intron | 60.0% | |
| ATGCGGGAGCTTCAGTGCAC+CGG | + | chr1.3:76111108-76111127 | MS.gene74962:intron | 60.0% | |
| CACAGCTTCCACCTCAGACG+GGG | - | chr1.3:76115097-76115116 | None:intergenic | 60.0% | |
| CACTGCTGGGCTCCTGAAAG+TGG | - | chr1.3:76111767-76111786 | None:intergenic | 60.0% | |
| CTCCACAGTTGGAGAGGAGC+TGG | - | chr1.3:76113809-76113828 | None:intergenic | 60.0% | |
| CTGAAGCTCCCGCATACGCA+GGG | - | chr1.3:76111103-76111122 | None:intergenic | 60.0% | |
| CTTAAGAGGGGTGACCAGCG+AGG | - | chr1.3:76114242-76114261 | None:intergenic | 60.0% | |
| CTTCCCCAAAGCGCAAGGCT+AGG | - | chr1.3:76112111-76112130 | None:intergenic | 60.0% | |
| CTTTCAGGAGCCCAGCAGTG+TGG | + | chr1.3:76111767-76111786 | MS.gene74962:intron | 60.0% | |
| GGAGCGGTCAACCCCAAAAG+TGG | - | chr1.3:76111442-76111461 | None:intergenic | 60.0% | |
| GTCCAGCTCCTCTCCAACTG+TGG | + | chr1.3:76113804-76113823 | MS.gene74962:intron | 60.0% | |
| TCACCCCCACCGCAAGTTTG+TGG | - | chr1.3:76111579-76111598 | None:intergenic | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | + | chr1.3:76111076-76111095 | MS.gene74962:intron | 60.0% |
| !! | CTAGCCTTGCGCTTTGGGGA+AGG | + | chr1.3:76112109-76112128 | MS.gene74962:CDS | 60.0% |
| CATACGCAGGGTCCGGGAAG+GGG | - | chr1.3:76111091-76111110 | None:intergenic | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | - | chr1.3:76111078-76111097 | None:intergenic | 65.0% | |
| CTTCCCGGACCCTGCGTATG+CGG | + | chr1.3:76111091-76111110 | MS.gene74962:intron | 65.0% | |
| GCATACGCAGGGTCCGGGAA+GGG | - | chr1.3:76111092-76111111 | None:intergenic | 65.0% | |
| TCCTGCATCGTGGTGCGGAG+CGG | - | chr1.3:76111458-76111477 | None:intergenic | 65.0% | |
| TGCGGGAGCTTCAGTGCACC+GGG | + | chr1.3:76111109-76111128 | MS.gene74962:intron | 65.0% | |
| TTCCCGGACCCTGCGTATGC+GGG | + | chr1.3:76111092-76111111 | MS.gene74962:intron | 65.0% | |
| ACCGCTCCGCACCACGATGC+AGG | + | chr1.3:76111454-76111473 | MS.gene74962:intron | 70.0% | |
| CGCATACGCAGGGTCCGGGA+AGG | - | chr1.3:76111093-76111112 | None:intergenic | 70.0% | |
| CTCCCGCATACGCAGGGTCC+GGG | - | chr1.3:76111097-76111116 | None:intergenic | 70.0% | |
| GCTCCCGCATACGCAGGGTC+CGG | - | chr1.3:76111098-76111117 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 76110499 | 76115131 | 76110499 | ID=MS.gene74962 |
| chr1.3 | mRNA | 76110499 | 76115131 | 76110499 | ID=MS.gene74962.t1;Parent=MS.gene74962 |
| chr1.3 | exon | 76110499 | 76110512 | 76110499 | ID=MS.gene74962.t1.exon1;Parent=MS.gene74962.t1 |
| chr1.3 | CDS | 76110499 | 76110512 | 76110499 | ID=cds.MS.gene74962.t1;Parent=MS.gene74962.t1 |
| chr1.3 | exon | 76110658 | 76110739 | 76110658 | ID=MS.gene74962.t1.exon2;Parent=MS.gene74962.t1 |
| chr1.3 | CDS | 76110658 | 76110739 | 76110658 | ID=cds.MS.gene74962.t1;Parent=MS.gene74962.t1 |
| chr1.3 | exon | 76110831 | 76110911 | 76110831 | ID=MS.gene74962.t1.exon3;Parent=MS.gene74962.t1 |
| chr1.3 | CDS | 76110831 | 76110911 | 76110831 | ID=cds.MS.gene74962.t1;Parent=MS.gene74962.t1 |
| chr1.3 | exon | 76111774 | 76111887 | 76111774 | ID=MS.gene74962.t1.exon4;Parent=MS.gene74962.t1 |
| chr1.3 | CDS | 76111774 | 76111887 | 76111774 | ID=cds.MS.gene74962.t1;Parent=MS.gene74962.t1 |
| chr1.3 | exon | 76112046 | 76112147 | 76112046 | ID=MS.gene74962.t1.exon5;Parent=MS.gene74962.t1 |
| chr1.3 | CDS | 76112046 | 76112147 | 76112046 | ID=cds.MS.gene74962.t1;Parent=MS.gene74962.t1 |
| chr1.3 | exon | 76112573 | 76112631 | 76112573 | ID=MS.gene74962.t1.exon6;Parent=MS.gene74962.t1 |
| chr1.3 | CDS | 76112573 | 76112631 | 76112573 | ID=cds.MS.gene74962.t1;Parent=MS.gene74962.t1 |
| chr1.3 | exon | 76113583 | 76113685 | 76113583 | ID=MS.gene74962.t1.exon7;Parent=MS.gene74962.t1 |
| chr1.3 | CDS | 76113583 | 76113685 | 76113583 | ID=cds.MS.gene74962.t1;Parent=MS.gene74962.t1 |
| chr1.3 | exon | 76114881 | 76114946 | 76114881 | ID=MS.gene74962.t1.exon8;Parent=MS.gene74962.t1 |
| chr1.3 | CDS | 76114881 | 76114946 | 76114881 | ID=cds.MS.gene74962.t1;Parent=MS.gene74962.t1 |
| chr1.3 | exon | 76115039 | 76115131 | 76115039 | ID=MS.gene74962.t1.exon9;Parent=MS.gene74962.t1 |
| chr1.3 | CDS | 76115039 | 76115131 | 76115039 | ID=cds.MS.gene74962.t1;Parent=MS.gene74962.t1 |
| Gene Sequence |
| Protein sequence |
