AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene008597

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene008597.t1 MTR_3g031450 93.263 475 32 0 1 475 1 475 0.0 919
MS.gene008597.t1 MTR_3g031400 86.820 478 55 3 1 475 1 473 0.0 860
MS.gene008597.t1 MTR_5g072860 52.941 459 186 8 18 454 18 468 4.03e-170 487
MS.gene008597.t1 MTR_5g075440 52.876 452 193 7 18 453 10 457 1.69e-160 462
MS.gene008597.t1 MTR_5g072810 48.775 449 208 10 18 451 12 453 8.43e-143 417
MS.gene008597.t1 MTR_5g072820 47.865 445 215 7 18 451 10 448 3.78e-140 410
MS.gene008597.t1 MTR_5g072840 46.966 445 219 7 18 451 10 448 1.57e-138 406
MS.gene008597.t1 MTR_5g072830 46.966 445 219 7 18 451 10 448 2.30e-138 405
MS.gene008597.t1 MTR_5g072850 45.055 455 177 10 9 458 2 388 3.28e-117 349
MS.gene008597.t1 MTR_8g083290 27.731 476 286 11 19 452 5 464 2.96e-58 199
MS.gene008597.t1 MTR_6g014290 31.211 487 275 17 13 452 5 478 1.71e-57 197
MS.gene008597.t1 MTR_6g038300 30.482 456 286 13 18 452 11 456 1.73e-57 197
MS.gene008597.t1 MTR_3g008010 29.012 486 287 13 13 452 5 478 4.51e-57 196
MS.gene008597.t1 MTR_8g088560 32.321 461 278 13 18 454 10 460 4.65e-56 193
MS.gene008597.t1 MTR_6g038220 30.901 466 289 14 9 453 2 455 2.10e-55 191
MS.gene008597.t1 MTR_7g080935 31.712 473 282 15 14 461 7 463 2.28e-55 191
MS.gene008597.t1 MTR_7g080950 31.278 454 284 13 16 451 4 447 2.31e-55 191
MS.gene008597.t1 MTR_6g038230 30.283 459 286 15 17 453 10 456 7.48e-55 190
MS.gene008597.t1 MTR_8g083280 29.854 479 287 15 19 462 8 472 1.46e-54 189
MS.gene008597.t1 MTR_5g035580 30.835 467 274 16 18 456 13 458 2.91e-54 189
MS.gene008597.t1 MTR_5g464760 29.485 485 288 15 12 452 6 480 4.12e-54 189
MS.gene008597.t1 MTR_6g038200 29.847 459 288 14 17 453 10 456 1.09e-53 187
MS.gene008597.t1 MTR_5g035560 31.034 464 273 16 18 454 11 454 1.34e-53 187
MS.gene008597.t1 MTR_6g038240 30.197 457 285 14 18 452 11 455 7.41e-53 185
MS.gene008597.t1 MTR_0036s0220 28.542 480 285 12 18 452 12 478 1.81e-52 184
MS.gene008597.t1 MTR_6g014040 28.106 491 294 14 10 452 2 481 1.51e-51 182
MS.gene008597.t1 MTR_7g080940 30.519 462 279 15 16 452 9 453 1.52e-51 181
MS.gene008597.t1 MTR_6g013960 27.664 488 293 13 13 452 5 480 2.61e-51 181
MS.gene008597.t1 MTR_6g014250 27.721 487 292 13 13 452 5 478 3.72e-51 181
MS.gene008597.t1 MTR_5g464810 28.512 484 282 14 17 452 11 478 5.13e-51 180
MS.gene008597.t1 MTR_5g064240 28.512 484 282 14 17 452 11 478 5.13e-51 180
MS.gene008597.t1 MTR_6g013990 28.106 491 279 13 16 452 8 478 7.98e-51 180
MS.gene008597.t1 MTR_3g084520 28.931 477 288 15 18 452 6 473 8.17e-51 179
MS.gene008597.t1 MTR_6g013900 29.303 488 284 16 13 452 5 479 1.04e-50 179
MS.gene008597.t1 MTR_2g008210 26.273 491 292 13 13 452 6 477 1.13e-50 179
MS.gene008597.t1 MTR_8g059425 27.160 486 296 14 13 452 5 478 4.78e-50 177
MS.gene008597.t1 MTR_6g014270 27.926 487 289 14 16 452 5 479 5.29e-50 177
MS.gene008597.t1 MTR_3g479490 29.278 485 283 16 16 453 4 475 1.01e-49 177
MS.gene008597.t1 MTR_6g014310 27.629 485 293 15 15 452 8 481 1.31e-49 176
MS.gene008597.t1 MTR_6g014020 27.198 489 294 14 13 452 5 480 1.89e-49 176
MS.gene008597.t1 MTR_3g084540 28.151 476 292 15 18 451 6 473 3.88e-49 175
MS.gene008597.t1 MTR_4g095008 28.721 477 276 14 18 452 11 465 7.44e-49 176
MS.gene008597.t1 MTR_6g013450 27.607 489 293 14 13 452 5 481 7.57e-49 174
MS.gene008597.t1 MTR_5g016480 28.274 481 284 15 19 454 9 473 1.50e-48 174
MS.gene008597.t1 MTR_6g014220 28.247 485 292 14 13 452 5 478 2.00e-48 173
MS.gene008597.t1 MTR_1g107380 28.151 476 294 13 18 456 13 477 3.04e-48 173
MS.gene008597.t1 MTR_6g014187 26.598 485 296 12 16 452 8 480 5.03e-48 172
MS.gene008597.t1 MTR_6g014200 26.804 485 295 12 16 452 5 477 9.62e-48 171
MS.gene008597.t1 MTR_1g107365 29.122 467 286 13 18 455 45 495 1.01e-47 172
MS.gene008597.t1 MTR_6g014050 27.835 485 292 15 15 452 8 481 1.49e-47 171
MS.gene008597.t1 MTR_3g479470 29.955 444 246 16 16 409 11 439 1.78e-47 171
MS.gene008597.t1 MTR_6g013920 29.569 487 284 16 13 452 5 479 2.05e-47 171
MS.gene008597.t1 MTR_1g107350 28.008 482 286 13 18 455 8 472 6.94e-47 169
MS.gene008597.t1 MTR_3g084530 28.151 476 291 15 18 451 6 472 7.87e-47 169
MS.gene008597.t1 MTR_6g011340 27.016 496 286 13 13 452 5 480 1.00e-46 169
MS.gene008597.t1 MTR_6g013440 26.653 484 297 16 16 452 9 481 1.60e-46 168
MS.gene008597.t1 MTR_7g011470 27.975 479 283 10 16 452 8 466 2.95e-46 167
MS.gene008597.t1 MTR_1g107360 29.079 478 278 19 18 455 9 465 3.10e-46 167
MS.gene008597.t1 MTR_3g079480 28.719 484 285 18 16 452 19 489 6.64e-46 167
MS.gene008597.t1 MTR_3g479520 28.947 494 291 20 7 452 2 483 8.45e-46 166
MS.gene008597.t1 MTR_3g049970 28.745 494 267 17 18 455 9 473 1.07e-45 166
MS.gene008597.t1 MTR_6g014170 27.423 485 280 15 13 452 5 462 1.38e-45 165
MS.gene008597.t1 MTR_7g011470 27.766 479 280 11 16 452 8 462 2.47e-45 164
MS.gene008597.t1 MTR_0288s0020 25.720 486 286 13 13 452 5 461 3.36e-45 164
MS.gene008597.t1 MTR_8g064870 27.801 482 291 13 12 451 7 473 4.82e-45 164
MS.gene008597.t1 MTR_1g107375 28.632 468 278 18 18 451 8 453 1.07e-44 162
MS.gene008597.t1 MTR_7g080900 29.067 461 297 15 13 453 7 457 1.91e-44 162
MS.gene008597.t1 MTR_4g094920 26.518 494 304 15 19 472 27 501 1.92e-44 163
MS.gene008597.t1 MTR_6g014150 26.061 495 286 14 16 452 5 477 8.15e-44 161
MS.gene008597.t1 MTR_4g094220 26.273 491 284 15 16 448 5 475 1.24e-43 160
MS.gene008597.t1 MTR_5g087620 26.523 509 288 20 13 453 5 495 2.39e-43 160
MS.gene008597.t1 MTR_4g024020 27.108 498 288 17 16 453 7 489 3.35e-43 159
MS.gene008597.t1 MTR_1g107315 28.631 482 277 15 17 451 7 468 6.14e-43 158
MS.gene008597.t1 MTR_6g014300 25.625 480 291 14 16 452 10 466 6.19e-43 158
MS.gene008597.t1 MTR_3g009510 26.815 496 283 18 16 454 3 475 7.86e-43 158
MS.gene008597.t1 MTR_7g102490 28.094 509 281 17 6 453 4 488 1.31e-42 158
MS.gene008597.t1 MTR_5g058320 27.443 481 282 16 16 452 8 465 3.11e-42 156
MS.gene008597.t1 MTR_8g027885 26.860 484 295 14 1 444 1 465 9.70e-42 155
MS.gene008597.t1 MTR_7g117405 26.250 480 301 12 18 453 12 482 1.33e-41 155
MS.gene008597.t1 MTR_1g107285 28.512 477 275 17 19 451 9 463 2.54e-41 154
MS.gene008597.t1 MTR_1g032490 28.782 476 294 13 12 451 4 470 3.43e-41 154
MS.gene008597.t1 MTR_8g009050 27.119 472 281 16 18 444 6 459 6.55e-41 152
MS.gene008597.t1 MTR_7g102460 27.165 508 285 18 6 453 4 486 8.97e-41 153
MS.gene008597.t1 MTR_8g027870 26.489 487 293 14 1 444 1 465 2.77e-40 151
MS.gene008597.t1 MTR_0184s0040 27.579 475 266 16 18 440 21 469 4.13e-40 150
MS.gene008597.t1 MTR_0078s0190 27.579 475 266 16 18 440 21 469 4.13e-40 150
MS.gene008597.t1 MTR_7g102560 25.720 486 302 14 18 453 9 485 7.00e-40 150
MS.gene008597.t1 MTR_7g013200 27.729 458 278 16 18 448 5 436 9.07e-40 149
MS.gene008597.t1 MTR_7g117170 26.263 495 287 13 1 444 1 468 1.61e-39 149
MS.gene008597.t1 MTR_8g008990 26.205 477 281 14 18 444 6 461 2.87e-39 148
MS.gene008597.t1 MTR_0078s0060 26.582 474 273 14 18 445 6 450 4.22e-39 147
MS.gene008597.t1 MTR_3g069710 26.763 482 294 18 12 462 5 458 2.72e-38 145
MS.gene008597.t1 MTR_8g009063 25.478 471 290 12 18 444 13 466 3.24e-38 145
MS.gene008597.t1 MTR_5g090660 24.950 497 293 13 16 455 3 476 3.40e-38 147
MS.gene008597.t1 MTR_8g064880 28.704 432 247 15 18 401 9 427 4.31e-38 145
MS.gene008597.t1 MTR_4g064987 26.304 460 281 15 15 443 5 437 6.17e-38 144
MS.gene008597.t1 MTR_8g006710 26.782 463 289 14 16 440 4 454 6.51e-38 144
MS.gene008597.t1 MTR_8g009055 26.271 472 285 14 18 444 6 459 7.49e-38 144
MS.gene008597.t1 MTR_8g006730 26.439 469 284 15 16 440 4 455 7.68e-38 144
MS.gene008597.t1 MTR_7g013260 26.338 467 281 17 14 448 2 437 1.20e-37 143
MS.gene008597.t1 MTR_0078s0010 26.087 483 293 16 17 454 5 468 1.77e-37 143
MS.gene008597.t1 MTR_7g013220 26.205 477 272 16 18 448 5 447 4.04e-37 142
MS.gene008597.t1 MTR_4g064987 26.237 465 281 16 15 443 5 443 4.07e-37 142
MS.gene008597.t1 MTR_8g466240 25.910 467 300 15 16 453 6 455 4.66e-37 142
MS.gene008597.t1 MTR_7g071040 25.866 491 294 16 9 444 8 483 6.85e-37 142
MS.gene008597.t1 MTR_7g013180 28.172 465 272 18 18 448 5 441 7.89e-37 141
MS.gene008597.t1 MTR_5g045960 25.562 489 301 12 18 453 9 487 8.50e-37 142
MS.gene008597.t1 MTR_7g013240 26.282 468 277 16 15 448 3 436 1.33e-36 140
MS.gene008597.t1 MTR_3g069690 25.205 488 298 16 12 461 2 460 1.58e-36 140
MS.gene008597.t1 MTR_5g031840 26.708 483 279 16 18 451 5 461 2.21e-36 140
MS.gene008597.t1 MTR_7g047030 25.514 486 290 17 17 453 5 467 5.33e-36 139
MS.gene008597.t1 MTR_7g047270 25.514 486 290 17 17 453 5 467 5.33e-36 139
MS.gene008597.t1 MTR_7g102450 24.416 471 313 9 18 453 11 473 6.00e-36 139
MS.gene008597.t1 MTR_7g070800 27.061 473 289 16 18 444 6 468 6.13e-36 139
MS.gene008597.t1 MTR_8g009073 26.840 462 283 12 18 439 6 452 6.27e-36 139
MS.gene008597.t1 MTR_7g070930 26.295 502 286 19 5 444 1 480 8.83e-36 139
MS.gene008597.t1 MTR_6g033675 25.159 473 301 13 15 447 1 460 9.18e-36 139
MS.gene008597.t1 MTR_1g019510 26.115 471 284 15 18 444 6 456 1.40e-35 138
MS.gene008597.t1 MTR_6g023665 25.532 470 285 13 16 440 11 460 1.67e-35 137
MS.gene008597.t1 MTR_7g070610 26.170 470 301 12 18 444 13 479 1.81e-35 138
MS.gene008597.t1 MTR_7g070910 25.662 491 295 17 9 444 2 477 1.85e-35 138
MS.gene008597.t1 MTR_4g485640 27.948 458 282 11 28 449 219 664 2.02e-35 140
MS.gene008597.t1 MTR_8g077590 26.971 482 262 18 17 441 8 456 2.61e-35 137
MS.gene008597.t1 MTR_7g070660 25.361 485 295 15 18 451 11 479 2.77e-35 137
MS.gene008597.t1 MTR_1g062380 24.048 499 303 15 18 456 16 498 2.98e-35 137
MS.gene008597.t1 MTR_7g055710 26.653 484 298 16 9 444 2 476 3.90e-35 137
MS.gene008597.t1 MTR_5g070090 25.887 479 290 16 17 454 10 464 4.40e-35 136
MS.gene008597.t1 MTR_8g009067 25.532 470 283 13 18 441 6 454 6.93e-35 136
MS.gene008597.t1 MTR_7g070780 26.205 477 305 15 18 451 11 483 6.95e-35 136
MS.gene008597.t1 MTR_8g008970 26.383 470 279 15 18 441 6 454 8.11e-35 138
MS.gene008597.t1 MTR_8g008970 29.911 224 133 7 230 444 573 781 1.09e-21 99.0
MS.gene008597.t1 MTR_8g465670 27.368 475 275 18 16 440 5 459 9.48e-35 135
MS.gene008597.t1 MTR_7g070940 27.027 481 291 16 16 451 7 472 1.03e-34 135
MS.gene008597.t1 MTR_8g074550 25.615 488 282 16 17 440 7 477 1.04e-34 136
MS.gene008597.t1 MTR_2g040530 25.000 480 302 17 16 453 3 466 1.11e-34 135
MS.gene008597.t1 MTR_6g033725 23.173 479 296 11 15 445 1 455 2.11e-34 135
MS.gene008597.t1 MTR_6g005600 26.625 477 282 16 16 444 4 460 4.04e-34 134
MS.gene008597.t1 MTR_5g098930 25.051 491 289 17 16 452 3 468 4.09e-34 134
MS.gene008597.t1 MTR_0184s0030 25.519 482 299 14 18 455 6 471 6.12e-34 133
MS.gene008597.t1 MTR_8g012650 28.084 381 218 12 109 451 109 471 7.87e-34 133
MS.gene008597.t1 MTR_8g043470 24.031 387 228 8 90 452 34 378 1.20e-33 131
MS.gene008597.t1 MTR_5g090630 22.661 481 313 9 16 453 3 467 1.72e-33 132
MS.gene008597.t1 MTR_7g070860 27.706 462 286 18 18 444 7 455 3.00e-33 131
MS.gene008597.t1 MTR_6g014240 25.417 480 276 17 16 451 5 446 3.76e-33 130
MS.gene008597.t1 MTR_8g066610 25.257 487 293 16 18 451 9 477 4.37e-33 131
MS.gene008597.t1 MTR_2g046750 24.017 483 304 16 16 453 3 467 4.52e-33 130
MS.gene008597.t1 MTR_7g102550 25.155 485 308 12 14 449 5 483 5.08e-33 131
MS.gene008597.t1 MTR_5g090600 24.512 461 293 14 16 441 3 443 7.71e-33 130
MS.gene008597.t1 MTR_3g479610 27.726 321 202 9 152 452 3 313 7.95e-33 127
MS.gene008597.t1 MTR_2g046820 23.679 473 315 12 16 453 3 464 8.15e-33 130
MS.gene008597.t1 MTR_4g485630 24.370 476 307 12 18 451 9 473 9.42e-33 130
MS.gene008597.t1 MTR_5g090670 23.690 477 298 12 16 440 3 465 1.10e-32 130
MS.gene008597.t1 MTR_4g031800 24.892 462 297 14 19 440 10 461 1.42e-32 129
MS.gene008597.t1 MTR_5g045970 24.846 487 305 16 18 452 16 493 1.79e-32 129
MS.gene008597.t1 MTR_6g014190 27.397 292 189 6 175 452 5 287 2.19e-32 125
MS.gene008597.t1 MTR_5g090700 23.602 483 291 16 16 440 3 465 2.24e-32 129
MS.gene008597.t1 MTR_5g031830 26.141 482 299 16 11 451 5 470 2.56e-32 129
MS.gene008597.t1 MTR_6g488280 24.628 471 288 14 16 440 4 453 2.67e-32 129
MS.gene008597.t1 MTR_0428s0010 24.628 471 288 14 16 440 4 453 2.67e-32 129
MS.gene008597.t1 MTR_8g007585 33.831 201 116 3 261 452 200 392 2.68e-32 127
MS.gene008597.t1 MTR_8g007585 26.667 210 112 10 13 192 5 202 1.84e-11 66.2
MS.gene008597.t1 MTR_0009s0240 24.291 494 286 18 16 456 5 463 2.87e-32 128
MS.gene008597.t1 MTR_7g070740 25.000 492 296 14 9 444 2 476 2.95e-32 129
MS.gene008597.t1 MTR_8g012635 26.392 485 281 16 17 447 5 467 5.16e-32 128
MS.gene008597.t1 MTR_5g090620 23.732 493 301 14 16 452 3 476 5.40e-32 128
MS.gene008597.t1 MTR_4g117960 24.740 481 296 14 22 451 15 480 7.43e-32 127
MS.gene008597.t1 MTR_8g006270 28.338 367 217 11 113 448 109 460 8.75e-32 127
MS.gene008597.t1 MTR_6g033625 26.042 480 274 15 15 440 1 453 9.91e-32 127
MS.gene008597.t1 MTR_4g118000 23.881 469 300 13 22 451 16 466 1.01e-31 127
MS.gene008597.t1 MTR_6g033660 26.816 358 219 9 113 445 118 457 3.96e-31 125
MS.gene008597.t1 MTR_4g108250 25.314 478 298 17 18 444 11 480 4.89e-31 125
MS.gene008597.t1 MTR_5g016660 25.941 505 294 18 5 451 1 483 6.75e-31 125
MS.gene008597.t1 MTR_1g029540 32.258 217 128 4 253 452 246 460 8.55e-31 124
MS.gene008597.t1 MTR_6g014160 26.724 348 202 9 58 378 45 366 1.35e-30 122
MS.gene008597.t1 MTR_0891s0010 26.780 295 187 7 172 452 11 290 1.66e-30 120
MS.gene008597.t1 MTR_5g019580 24.846 487 280 14 16 440 5 467 2.68e-30 123
MS.gene008597.t1 MTR_4g008630 33.493 209 120 4 261 452 257 463 2.81e-30 123
MS.gene008597.t1 MTR_4g485620 26.525 377 252 9 94 451 84 454 5.03e-30 122
MS.gene008597.t1 MTR_8g006220 26.446 484 277 17 16 440 4 467 5.28e-30 122
MS.gene008597.t1 MTR_6g033615 24.026 462 292 12 15 440 1 439 8.08e-30 121
MS.gene008597.t1 MTR_5g070040 25.052 483 296 16 16 454 9 469 8.20e-30 121
MS.gene008597.t1 MTR_8g009067 28.080 349 205 10 122 440 3 335 8.22e-30 119
MS.gene008597.t1 MTR_2g098430 22.535 497 315 14 16 457 4 485 8.31e-30 122
MS.gene008597.t1 MTR_7g070810 24.187 492 298 15 14 451 5 475 9.41e-30 121
MS.gene008597.t1 MTR_8g071070 23.529 493 301 14 16 456 5 473 1.15e-29 121
MS.gene008597.t1 MTR_4g117980 33.182 220 122 5 256 451 263 481 1.29e-29 121
MS.gene008597.t1 MTR_5g031860 27.049 488 286 18 11 451 5 469 1.55e-29 120
MS.gene008597.t1 MTR_5g027210 23.705 502 298 17 15 450 1 483 1.76e-29 120
MS.gene008597.t1 MTR_4g082820 27.837 467 274 19 18 436 7 458 2.95e-29 120
MS.gene008597.t1 MTR_5g090580 22.967 492 305 14 16 452 3 475 4.15e-29 119
MS.gene008597.t1 MTR_0477s0010 31.841 201 120 3 261 452 125 317 4.59e-29 117
MS.gene008597.t1 MTR_6g035265 23.640 478 300 16 22 452 15 474 5.92e-29 119
MS.gene008597.t1 MTR_5g090610 23.555 467 295 13 16 440 3 449 7.83e-29 119
MS.gene008597.t1 MTR_8g006260 28.297 364 211 11 110 440 112 458 1.25e-28 118
MS.gene008597.t1 MTR_8g012745 25.152 493 285 19 17 451 5 471 1.59e-28 118
MS.gene008597.t1 MTR_8g009073 28.399 331 197 8 136 439 6 323 1.63e-28 115
MS.gene008597.t1 MTR_8g012730 33.182 220 112 6 248 439 84 296 4.73e-28 114
MS.gene008597.t1 MTR_5g019580 29.699 266 146 6 206 440 236 491 5.51e-28 117
MS.gene008597.t1 MTR_4g082810 26.650 409 243 16 18 382 7 402 1.37e-27 114
MS.gene008597.t1 MTR_4g117950 27.473 273 175 6 201 451 191 462 1.49e-27 115
MS.gene008597.t1 MTR_6g078320 27.336 289 173 7 180 445 199 473 1.54e-27 115
MS.gene008597.t1 MTR_7g071050 24.895 474 259 18 7 435 2 423 1.59e-27 114
MS.gene008597.t1 MTR_2g059240 23.203 487 310 17 9 452 4 469 4.72e-27 114
MS.gene008597.t1 MTR_5g067170 23.629 474 309 12 22 451 15 479 5.12e-27 114
MS.gene008597.t1 MTR_7g046490 30.469 256 140 8 210 441 212 453 6.85e-27 113
MS.gene008597.t1 MTR_6g035185 22.222 477 315 13 22 451 15 482 8.56e-27 113
MS.gene008597.t1 MTR_7g012120 32.456 228 127 5 250 451 257 483 1.12e-26 112
MS.gene008597.t1 MTR_8g032950 21.649 485 317 13 19 454 13 483 1.17e-26 112
MS.gene008597.t1 MTR_2g035040 27.759 299 188 7 179 451 90 386 1.57e-26 111
MS.gene008597.t1 MTR_4g128690 22.629 464 299 13 18 449 15 450 1.70e-26 112
MS.gene008597.t1 MTR_4g117890 23.142 471 308 12 19 448 14 471 2.69e-26 111
MS.gene008597.t1 MTR_8g090095 29.864 221 133 4 253 453 263 481 3.17e-26 111
MS.gene008597.t1 MTR_6g013680 25.481 416 226 16 69 452 12 375 3.58e-26 110
MS.gene008597.t1 MTR_7g470610 33.333 201 115 5 200 383 68 266 4.25e-26 107
MS.gene008597.t1 MTR_7g070583 33.333 201 115 5 200 383 68 266 4.25e-26 107
MS.gene008597.t1 MTR_8g044140 26.835 395 235 15 94 451 71 448 5.31e-26 110
MS.gene008597.t1 MTR_0536s0010 22.366 465 313 10 22 451 25 476 7.55e-26 110
MS.gene008597.t1 MTR_5g029800 30.222 225 130 5 253 451 254 477 8.76e-26 110
MS.gene008597.t1 MTR_5g098960 24.719 445 263 16 16 419 5 418 1.05e-25 109
MS.gene008597.t1 MTR_1g019520 30.303 231 120 6 261 466 4 218 1.18e-25 104
MS.gene008597.t1 MTR_2g035020 28.369 282 172 7 200 454 206 484 1.49e-25 109
MS.gene008597.t1 MTR_4g485590 26.119 402 231 13 17 383 8 378 2.62e-25 107
MS.gene008597.t1 MTR_0536s0020 28.704 216 128 4 261 451 265 479 4.63e-25 108
MS.gene008597.t1 MTR_7g102520 22.535 497 324 13 10 454 4 491 5.66e-25 108
MS.gene008597.t1 MTR_7g067120 24.138 435 267 16 16 425 7 403 6.41e-25 107
MS.gene008597.t1 MTR_4g128720 21.552 464 311 12 16 449 13 453 7.14e-25 107
MS.gene008597.t1 MTR_1g040310 25.377 398 255 13 99 465 111 497 7.46e-25 107
MS.gene008597.t1 MTR_7g070870 25.123 406 234 13 18 377 19 400 7.59e-25 107
MS.gene008597.t1 MTR_3g009490 34.197 193 96 7 286 454 2 187 8.25e-25 101
MS.gene008597.t1 MTR_5g004940 31.707 205 102 5 261 451 197 377 1.34e-24 105
MS.gene008597.t1 MTR_8g012630 30.698 215 114 6 261 447 204 411 1.80e-24 105
MS.gene008597.t1 MTR_7g067330 25.127 394 249 14 16 390 7 373 1.92e-24 105
MS.gene008597.t1 MTR_5g066410 24.424 434 280 13 21 425 1 415 2.38e-24 105
MS.gene008597.t1 MTR_6g035295 26.703 367 227 10 110 444 121 477 7.18e-24 104
MS.gene008597.t1 MTR_2g034990 24.868 378 249 9 103 451 110 481 2.45e-23 103
MS.gene008597.t1 MTR_7g080960 30.088 226 107 5 232 453 294 472 3.01e-23 102
MS.gene008597.t1 MTR_8g007565 23.778 450 284 14 18 425 7 439 4.05e-23 102
MS.gene008597.t1 MTR_8g007650 24.000 450 283 14 18 425 7 439 4.48e-23 102
MS.gene008597.t1 MTR_8g068340 24.078 461 272 18 18 426 12 446 6.17e-23 101
MS.gene008597.t1 MTR_5g072825 44.330 97 44 3 9 99 2 94 2.57e-22 91.7
MS.gene008597.t1 MTR_4g123553 23.394 436 293 16 18 426 15 436 2.86e-22 99.8
MS.gene008597.t1 MTR_5g066390 31.875 160 92 3 302 452 64 215 4.92e-22 94.7
MS.gene008597.t1 MTR_5g040030 23.379 509 323 17 9 464 4 498 1.87e-21 97.4
MS.gene008597.t1 MTR_8g068330 24.558 452 284 17 18 429 8 442 3.33e-21 96.3
MS.gene008597.t1 MTR_7g070760 32.308 195 113 4 202 392 29 208 3.61e-21 92.0
MS.gene008597.t1 MTR_2086s0010 28.409 176 108 3 287 452 5 172 3.89e-21 90.9
MS.gene008597.t1 MTR_1996s0010 28.409 176 108 3 287 452 5 172 3.89e-21 90.9
MS.gene008597.t1 MTR_8g068360 24.350 423 247 20 18 391 12 410 4.19e-21 96.3
MS.gene008597.t1 MTR_5g039900 23.188 483 294 14 19 444 14 476 4.53e-21 96.3
MS.gene008597.t1 MTR_7g039550 28.235 255 161 6 210 444 2 254 1.01e-20 92.4
MS.gene008597.t1 MTR_1g107325 24.385 447 233 15 18 456 8 357 1.71e-20 93.2
MS.gene008597.t1 MTR_6g014186 21.996 491 273 17 16 452 5 439 1.85e-20 94.0
MS.gene008597.t1 MTR_6g014185 28.458 253 151 8 202 453 123 346 2.46e-20 92.8
MS.gene008597.t1 MTR_8g009840 32.124 193 98 7 278 444 333 518 7.81e-20 92.8
MS.gene008597.t1 MTR_2g008226 32.164 171 104 6 263 425 278 444 3.02e-19 90.5
MS.gene008597.t1 MTR_2g008225 23.490 447 284 16 18 426 15 441 3.13e-19 90.5
MS.gene008597.t1 MTR_2g008220 23.596 445 286 15 18 426 14 440 6.56e-19 89.4
MS.gene008597.t1 MTR_6g042310 21.921 406 267 11 18 390 18 406 8.27e-19 89.4
MS.gene008597.t1 MTR_2g046620 27.511 229 151 6 206 426 216 437 5.15e-18 86.7
MS.gene008597.t1 MTR_6g036650 23.649 444 289 16 18 426 18 446 1.84e-17 85.1
MS.gene008597.t1 MTR_2g083480 27.803 223 131 5 213 420 220 427 3.75e-17 84.0
MS.gene008597.t1 MTR_6g014000 31.008 129 81 2 321 449 33 153 9.99e-17 82.8
MS.gene008597.t1 MTR_4g077960 22.989 435 278 14 28 427 2 414 1.18e-16 82.4
MS.gene008597.t1 MTR_0536s0030 28.846 156 100 4 304 451 199 351 2.65e-16 80.5
MS.gene008597.t1 MTR_2g014900 21.739 437 290 12 18 420 7 425 6.56e-16 80.1
MS.gene008597.t1 MTR_7g070995 34.091 132 78 4 321 444 7 137 1.05e-15 75.1
MS.gene008597.t1 MTR_3g435310 30.636 173 106 6 263 426 228 395 2.11e-15 78.6
MS.gene008597.t1 MTR_4g059370 26.749 243 149 6 195 421 133 362 4.08e-15 77.4
MS.gene008597.t1 MTR_2g083430 22.222 459 276 13 18 427 8 434 4.17e-14 74.7
MS.gene008597.t1 MTR_8g056740 26.702 191 131 3 201 383 109 298 5.22e-14 73.9
MS.gene008597.t1 MTR_0199s0010 26.033 242 145 9 13 222 5 244 1.27e-13 71.6
MS.gene008597.t1 MTR_2g083380 28.251 223 136 6 210 420 234 444 1.48e-13 73.2
MS.gene008597.t1 MTR_2g083390 25.837 209 129 5 213 420 220 403 9.62e-13 70.5
MS.gene008597.t1 MTR_1g090270 24.280 243 149 6 198 421 209 435 1.02e-12 70.5
MS.gene008597.t1 MTR_2g083490 22.247 445 279 15 18 420 8 427 1.97e-12 69.3
MS.gene008597.t1 MTR_2g083420 26.829 164 105 4 258 420 254 403 9.05e-12 67.4
MS.gene008597.t1 MTR_3g479620 32.877 146 73 5 16 141 4 144 1.69e-11 63.2
MS.gene008597.t1 MTR_4g079250 25.424 177 113 3 258 420 256 427 3.93e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene008597.t1 AT2G30150 44.805 462 231 7 7 453 2 454 2.54e-140 411
MS.gene008597.t1 AT2G30140 44.565 460 235 6 7 454 2 453 2.52e-138 405
MS.gene008597.t1 AT2G30150 45.414 447 220 7 22 453 1 438 1.83e-137 403
MS.gene008597.t1 AT2G30140 44.252 461 236 6 7 454 2 454 7.48e-137 402
MS.gene008597.t1 AT1G22360 28.953 487 280 13 16 452 8 478 2.24e-60 205
MS.gene008597.t1 AT2G36970 28.862 492 278 14 16 456 8 478 2.29e-60 206
MS.gene008597.t1 AT1G22400 30.266 489 272 16 16 452 11 482 2.85e-60 205
MS.gene008597.t1 AT1G22360 28.131 487 272 12 16 452 8 466 8.63e-56 193
MS.gene008597.t1 AT1G22340 29.532 491 276 16 16 451 11 486 1.51e-55 192
MS.gene008597.t1 AT2G28080 30.642 483 257 17 22 464 22 466 1.31e-54 190
MS.gene008597.t1 AT1G05675 29.501 461 280 12 17 448 5 449 2.63e-54 188
MS.gene008597.t1 AT2G31750 30.063 479 282 14 16 461 6 464 3.97e-54 189
MS.gene008597.t1 AT2G31750 30.149 471 276 14 16 453 6 456 8.29e-54 187
MS.gene008597.t1 AT1G05680 28.913 460 284 12 17 448 5 449 8.22e-53 184
MS.gene008597.t1 AT1G22380 28.189 486 285 15 16 452 11 481 9.82e-53 185
MS.gene008597.t1 AT1G78270 29.253 482 285 15 16 452 11 481 6.98e-52 183
MS.gene008597.t1 AT1G05560 26.205 477 289 13 18 456 5 456 1.70e-51 181
MS.gene008597.t1 AT1G05560 26.186 485 295 13 10 456 47 506 3.15e-51 182
MS.gene008597.t1 AT1G05530 26.170 470 291 12 18 451 5 454 1.24e-50 179
MS.gene008597.t1 AT4G15550 28.571 483 268 14 18 448 13 470 7.81e-49 174
MS.gene008597.t1 AT2G43840 27.966 472 276 14 15 451 4 446 3.65e-48 172
MS.gene008597.t1 AT2G23260 27.706 462 292 15 16 451 8 453 1.02e-47 171
MS.gene008597.t1 AT2G43840 28.178 472 275 15 15 451 4 446 2.35e-47 170
MS.gene008597.t1 AT3G21560 27.016 496 293 15 1 451 1 472 3.42e-47 170
MS.gene008597.t1 AT4G15490 28.306 484 301 15 17 465 7 479 9.78e-47 169
MS.gene008597.t1 AT2G43820 28.233 464 283 15 16 451 5 446 1.83e-46 167
MS.gene008597.t1 AT1G10400 25.833 480 298 16 16 455 5 466 1.47e-45 165
MS.gene008597.t1 AT1G24100 26.737 475 294 13 10 451 5 458 1.54e-45 165
MS.gene008597.t1 AT2G31790 27.824 478 270 16 16 448 6 453 3.72e-45 164
MS.gene008597.t1 AT2G23250 29.345 443 281 17 27 451 7 435 4.05e-45 163
MS.gene008597.t1 AT1G22370 27.122 483 289 16 16 452 11 476 7.31e-45 164
MS.gene008597.t1 AT4G15480 28.455 492 285 18 18 463 19 489 1.04e-44 163
MS.gene008597.t1 AT2G16890 27.255 499 294 22 13 466 4 478 2.51e-44 162
MS.gene008597.t1 AT4G01070 26.931 505 268 19 18 455 8 478 6.35e-44 161
MS.gene008597.t1 AT5G59580 26.907 472 280 13 15 451 6 447 4.03e-43 158
MS.gene008597.t1 AT5G59590 25.000 468 301 9 12 451 4 449 4.62e-42 155
MS.gene008597.t1 AT5G14860 26.220 492 287 17 18 454 8 478 6.91e-42 155
MS.gene008597.t1 AT3G21790 26.305 498 292 14 15 454 1 481 2.10e-41 154
MS.gene008597.t1 AT2G36750 26.639 488 294 15 18 453 10 485 5.68e-41 153
MS.gene008597.t1 AT3G21800 25.455 495 292 17 16 453 3 477 7.90e-41 152
MS.gene008597.t1 AT5G03490 27.623 467 278 17 18 449 19 460 1.63e-40 151
MS.gene008597.t1 AT3G46700 27.097 465 291 13 12 451 3 444 3.61e-40 150
MS.gene008597.t1 AT4G15500 26.282 468 301 14 18 453 9 464 1.29e-39 149
MS.gene008597.t1 AT3G53160 24.017 483 314 11 18 453 8 484 2.09e-39 149
MS.gene008597.t1 AT2G36780 26.400 500 281 19 18 453 14 490 6.56e-39 147
MS.gene008597.t1 AT3G02100 26.708 483 285 15 7 448 2 456 7.92e-39 147
MS.gene008597.t1 AT3G53150 26.628 522 303 17 1 453 1 511 1.01e-38 147
MS.gene008597.t1 AT2G36770 25.610 492 295 16 18 453 14 490 1.43e-38 147
MS.gene008597.t1 AT3G46660 26.709 468 287 13 16 451 12 455 1.56e-38 146
MS.gene008597.t1 AT5G38040 26.770 452 285 13 26 451 18 449 5.21e-38 144
MS.gene008597.t1 AT2G36800 25.249 503 284 17 18 453 12 489 9.69e-38 144
MS.gene008597.t1 AT3G46670 26.596 470 273 15 18 448 9 445 3.33e-37 142
MS.gene008597.t1 AT2G16890 26.207 435 267 16 13 407 4 424 4.48e-37 141
MS.gene008597.t1 AT4G15280 24.308 506 309 15 4 454 22 508 7.16e-37 142
MS.gene008597.t1 AT3G21780 25.155 485 304 13 15 454 1 471 8.07e-37 141
MS.gene008597.t1 AT3G46650 26.623 462 276 14 12 447 4 428 9.73e-37 140
MS.gene008597.t1 AT3G46690 26.464 461 281 13 12 432 3 445 1.51e-36 140
MS.gene008597.t1 AT3G46680 25.828 453 287 14 16 440 7 438 1.96e-36 140
MS.gene008597.t1 AT4G15280 24.138 493 304 14 15 454 1 476 2.81e-36 140
MS.gene008597.t1 AT4G14090 24.359 468 293 15 16 448 11 452 6.93e-36 139
MS.gene008597.t1 AT3G11340 25.325 462 297 16 16 452 7 445 6.95e-36 138
MS.gene008597.t1 AT5G17050 24.473 474 315 13 5 452 1 457 4.33e-35 136
MS.gene008597.t1 AT2G29740 25.309 486 296 14 16 451 6 474 5.01e-35 136
MS.gene008597.t1 AT3G21760 24.356 505 295 17 15 454 1 483 5.09e-35 136
MS.gene008597.t1 AT3G21750 24.341 493 298 15 15 454 1 471 6.64e-35 136
MS.gene008597.t1 AT5G26310 23.591 479 289 12 16 443 5 457 1.81e-34 135
MS.gene008597.t1 AT1G51210 25.734 443 285 17 8 426 10 432 3.05e-34 134
MS.gene008597.t1 AT2G29730 24.641 487 287 19 18 452 5 463 5.74e-34 133
MS.gene008597.t1 AT3G46720 26.444 450 279 12 16 440 7 429 7.13e-34 132
MS.gene008597.t1 AT3G50740 26.141 482 276 19 16 441 5 462 1.48e-33 132
MS.gene008597.t1 AT2G36790 25.610 492 295 18 18 453 13 489 2.48e-33 132
MS.gene008597.t1 AT2G36760 24.590 488 305 17 18 453 14 490 3.02e-33 132
MS.gene008597.t1 AT1G01420 25.732 478 278 18 18 444 8 459 4.01e-33 131
MS.gene008597.t1 AT1G01420 25.732 478 278 18 18 444 11 462 5.41e-33 131
MS.gene008597.t1 AT1G73880 25.466 483 295 18 16 456 12 471 7.06e-33 130
MS.gene008597.t1 AT5G38010 23.605 466 314 7 12 451 4 453 9.92e-33 129
MS.gene008597.t1 AT2G29710 22.899 476 311 15 17 452 4 463 1.26e-32 129
MS.gene008597.t1 AT1G07250 25.203 492 297 16 16 455 4 476 2.36e-32 129
MS.gene008597.t1 AT2G15480 23.409 487 314 15 18 451 10 490 2.69e-32 129
MS.gene008597.t1 AT3G55700 28.094 299 183 6 174 460 177 455 5.46e-32 127
MS.gene008597.t1 AT1G30530 26.030 461 298 15 17 453 11 452 9.25e-32 127
MS.gene008597.t1 AT5G17040 24.726 457 305 14 17 453 4 441 1.06e-31 126
MS.gene008597.t1 AT4G34138 23.790 496 306 17 10 452 3 479 1.34e-31 127
MS.gene008597.t1 AT1G07260 25.911 494 284 20 16 452 4 472 4.20e-31 125
MS.gene008597.t1 AT4G36770 24.375 480 275 16 18 444 4 448 4.67e-31 125
MS.gene008597.t1 AT4G15260 26.829 369 215 10 123 454 7 357 5.49e-31 123
MS.gene008597.t1 AT4G34131 25.806 372 249 11 99 452 118 480 6.23e-31 125
MS.gene008597.t1 AT2G15480 23.382 479 314 15 18 451 10 480 6.89e-31 125
MS.gene008597.t1 AT5G05900 24.835 455 283 15 18 432 8 443 1.36e-30 124
MS.gene008597.t1 AT3G22250 27.959 490 269 19 12 450 2 458 4.75e-30 122
MS.gene008597.t1 AT5G66690 26.395 466 286 17 16 440 5 454 6.13e-30 122
MS.gene008597.t1 AT2G29750 25.203 492 292 20 17 454 7 476 1.46e-29 121
MS.gene008597.t1 AT3G55710 29.278 263 155 7 213 461 215 460 2.26e-29 120
MS.gene008597.t1 AT2G15490 28.846 260 168 5 206 451 221 477 2.67e-29 120
MS.gene008597.t1 AT2G15490 28.517 263 168 5 206 451 221 480 3.14e-29 120
MS.gene008597.t1 AT5G05860 24.464 466 295 12 18 452 9 448 3.86e-29 119
MS.gene008597.t1 AT5G05870 23.871 465 309 10 16 451 6 454 6.89e-29 119
MS.gene008597.t1 AT2G26480 23.747 459 286 11 16 440 6 434 9.05e-29 118
MS.gene008597.t1 AT3G16520 26.923 364 225 12 110 450 113 458 1.05e-28 118
MS.gene008597.t1 AT5G05880 24.524 473 286 15 18 451 8 448 1.15e-28 118
MS.gene008597.t1 AT1G01390 25.786 477 283 17 18 447 8 460 1.16e-28 118
MS.gene008597.t1 AT1G07240 26.400 375 225 12 110 452 121 476 1.66e-28 118
MS.gene008597.t1 AT1G01390 25.786 477 283 17 18 447 25 477 1.85e-28 118
MS.gene008597.t1 AT4G34135 25.653 421 268 16 16 396 9 424 3.81e-28 117
MS.gene008597.t1 AT2G18570 23.629 474 292 15 16 440 3 455 4.75e-28 116
MS.gene008597.t1 AT5G05890 25.107 466 273 15 18 432 8 448 1.16e-27 115
MS.gene008597.t1 AT1G22370 27.653 311 187 10 165 452 11 306 1.40e-27 112
MS.gene008597.t1 AT3G16520 28.383 303 185 9 110 390 113 405 9.85e-27 112
MS.gene008597.t1 AT3G16520 28.383 303 185 9 110 390 113 405 1.22e-26 112
MS.gene008597.t1 AT5G37950 26.596 282 187 4 93 361 63 337 2.69e-25 107
MS.gene008597.t1 AT5G17030 23.382 479 319 15 5 455 1 459 3.20e-25 108
MS.gene008597.t1 AT2G18560 25.648 386 230 13 91 440 1 365 2.63e-24 104
MS.gene008597.t1 AT5G37950 26.132 287 188 4 93 361 63 343 7.36e-24 102
MS.gene008597.t1 AT5G65550 23.488 430 273 15 16 406 7 419 7.90e-23 101
MS.gene008597.t1 AT5G12890 22.453 481 311 17 18 448 10 478 2.17e-22 100
MS.gene008597.t1 AT5G17040 25.497 302 200 8 162 453 53 339 2.72e-21 95.1
MS.gene008597.t1 AT1G06000 23.093 485 269 16 14 451 6 433 3.21e-21 96.3
MS.gene008597.t1 AT5G49690 25.688 436 278 17 18 424 10 428 3.52e-21 96.3
MS.gene008597.t1 AT4G01070 25.466 322 192 11 18 311 8 309 4.61e-18 85.9
MS.gene008597.t1 AT1G64910 21.546 427 291 11 18 421 6 411 3.79e-16 80.9
MS.gene008597.t1 AT2G22590 32.895 152 88 5 263 402 274 423 1.02e-15 79.7
MS.gene008597.t1 AT1G50580 21.839 435 297 12 16 427 4 418 6.00e-15 77.4
MS.gene008597.t1 AT5G53990 24.167 240 153 6 193 421 190 411 3.16e-14 75.1
MS.gene008597.t1 AT3G29630 25.989 177 119 3 262 427 219 394 4.93e-13 71.2
MS.gene008597.t1 AT3G29630 25.989 177 119 3 262 427 245 420 5.31e-13 71.2
MS.gene008597.t1 AT2G22930 20.093 428 294 10 18 420 6 410 3.89e-12 68.6
MS.gene008597.t1 AT4G34135 25.077 323 206 13 16 307 9 326 4.78e-12 67.4
MS.gene008597.t1 AT5G54010 20.358 447 282 15 16 421 4 417 8.40e-12 67.4
MS.gene008597.t1 AT1G64920 22.689 238 155 7 200 421 191 415 2.09e-11 66.2

Find 99 sgRNAs with CRISPR-Local

Find 226 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTTGTTGGTGACAAGTTTA+TGG 0.187069 3.1:+49715647 MS.gene008597:CDS
GTTTGGACCAATTGAGTAAA+TGG 0.196898 3.1:-49718438 None:intergenic
GAAACATATGTGTGGGAAAA+TGG 0.209304 3.1:+49718691 MS.gene008597:CDS
ATCCTTCTATAGGTGGTTAT+TGG 0.229141 3.1:+49718756 MS.gene008597:CDS
ATTGTTGAAGATTGGAAAAT+TGG 0.237800 3.1:+49718878 MS.gene008597:CDS
CTCCACTATATTCTTCAAAA+AGG 0.256910 3.1:-49719089 None:intergenic
GCTTGCGTTGTAGGAAAATA+TGG 0.263003 3.1:-49715863 None:intergenic
GATAAAGAAATTCATGGATT+TGG 0.273240 3.1:+49718964 MS.gene008597:CDS
AACATACCTTGCTTTAATCT+TGG 0.291719 3.1:+49718458 MS.gene008597:CDS
TCTCTAAATGCTACTAATAA+TGG 0.298126 3.1:+49718494 MS.gene008597:CDS
TACCTAAATGCTTGCGTTGT+AGG 0.301252 3.1:-49715872 None:intergenic
TTTATTGATAAAGAAATTCA+TGG 0.318239 3.1:+49718958 MS.gene008597:CDS
ATATTCCGGTGGCTGCGTTC+TGG 0.321377 3.1:+49715805 MS.gene008597:CDS
TGGTTAAATCTTCAACCTAA+TGG 0.324598 3.1:+49718539 MS.gene008597:CDS
GTAAGATTATTGTTGAAGAT+TGG 0.329370 3.1:+49718870 MS.gene008597:CDS
ATTATATTCCATCAAATTCC+TGG 0.329643 3.1:+49718249 MS.gene008597:CDS
TTCCTACAACGCAAGCATTT+AGG 0.330420 3.1:+49715870 MS.gene008597:CDS
AATTGGGTGGAGAGTGAAAA+AGG 0.345078 3.1:+49718895 MS.gene008597:CDS
ACAATTCCCATTTACTCAAT+TGG 0.354488 3.1:+49718431 MS.gene008597:CDS
TGGCTCTTGATAGTGGCTTT+TGG 0.361667 3.1:-49715447 None:intergenic
AGATTAAAGCAAGGTATGTT+TGG 0.371270 3.1:-49718455 None:intergenic
ACAAAGGTGACAAGGATGTT+AGG 0.371807 3.1:-49715549 None:intergenic
TAACCAATCTATGTAACTTT+GGG 0.379372 3.1:-49718522 None:intergenic
TTTAACATTTCCTCTTGCTA+TGG 0.379731 3.1:+49718832 MS.gene008597:CDS
TTAACCAATCTATGTAACTT+TGG 0.381042 3.1:-49718523 None:intergenic
GAGCCCATTGCAAAATTTGT+TGG 0.389261 3.1:-49718310 None:intergenic
CTGCCCAAAGTTACATAGAT+TGG 0.396042 3.1:+49718519 MS.gene008597:CDS
AAACATATGTGTGGGAAAAT+GGG 0.397297 3.1:+49718692 MS.gene008597:CDS
TAGAGACAAGTGACTTGCTT+AGG 0.431016 3.1:-49715521 None:intergenic
GGGCAGTTCGTGTTGGAAAC+CGG 0.432940 3.1:+49715778 MS.gene008597:CDS
GAATCCATCCCTAACGTTGT+TGG 0.440660 3.1:+49715633 MS.gene008597:CDS
AACTTGTCACCAACAACGTT+AGG 0.445829 3.1:-49715642 None:intergenic
AGTTAATCGATCAGCTTGTT+CGG 0.451013 3.1:+49715715 MS.gene008597:CDS
TTGTTGAAGATTGGAAAATT+GGG 0.451022 3.1:+49718879 MS.gene008597:CDS
ATCGGTTTCAAGAACACAAA+TGG 0.451220 3.1:+49718595 MS.gene008597:CDS
TTTGGACCAATTGAGTAAAT+GGG 0.456999 3.1:-49718437 None:intergenic
TGGAAACCGGAGGAATATTC+CGG 0.460893 3.1:+49715791 MS.gene008597:CDS
CAAAGGTGACAAGGATGTTA+GGG 0.461834 3.1:-49715548 None:intergenic
TTGACATATGAAGCATCAAA+TGG 0.465864 3.1:+49719118 MS.gene008597:CDS
GTCCAATAACCACCTATAGA+AGG 0.466360 3.1:-49718758 None:intergenic
GTGTGGGAAAATGGGGTTTG+TGG 0.466437 3.1:+49718700 MS.gene008597:CDS
TGAAGGTGTTATGACTGAAA+TGG 0.475242 3.1:+49715677 MS.gene008597:CDS
ACAATAATCTTACTAATCAA+TGG 0.475557 3.1:-49718860 None:intergenic
TATCACGTGGCTCTTGATAG+TGG 0.476246 3.1:-49715454 None:intergenic
TGACTTGCTTAGGTTCATCA+TGG 0.476422 3.1:-49715511 None:intergenic
GTATTGTCACATCCTTCTAT+AGG 0.480794 3.1:+49718746 MS.gene008597:CDS
AACGTCAACGTCCGAGTTGT+GGG 0.488074 3.1:+49715830 MS.gene008597:CDS
ATGTACAAAACAGAACCATT+AGG 0.489854 3.1:-49718554 None:intergenic
GGATGATAAGTTAGACACTT+TGG 0.490333 3.1:+49718916 MS.gene008597:CDS
CCTTTGTTGTCACACAAGAA+TGG 0.490852 3.1:+49715565 MS.gene008597:CDS
AGACGAACCCAGGAATTTGA+TGG 0.492144 3.1:-49718257 None:intergenic
GATGTGACAATACCCTCAAT+TGG 0.495546 3.1:-49718736 None:intergenic
CAACGTCAACGTCCGAGTTG+TGG 0.496076 3.1:+49715829 MS.gene008597:CDS
CAGCTAGCAATAAAGAAAAG+TGG 0.510491 3.1:+49719043 MS.gene008597:CDS
TTATATTCCATCAAATTCCT+GGG 0.510705 3.1:+49718250 MS.gene008597:CDS
GACTTGCTTAGGTTCATCAT+GGG 0.512171 3.1:-49715510 None:intergenic
AAATGGGGTTTGTGGTGACA+TGG 0.513482 3.1:+49718708 MS.gene008597:CDS
AGACACTTTGGTGACAAAAG+AGG 0.516763 3.1:+49718928 MS.gene008597:CDS
ATGTGTCCACGTGATGGGTA+TGG 0.521026 3.1:-49715483 None:intergenic
TTCATATGGAAGTTATCTAT+CGG 0.526231 3.1:+49718577 MS.gene008597:CDS
GGTTGGAATTCTGTCATTGA+AGG 0.527600 3.1:+49718788 MS.gene008597:CDS
CAGCCACCGGAATATTCCTC+CGG 0.528894 3.1:-49715797 None:intergenic
ACTTGTCACCAACAACGTTA+GGG 0.530251 3.1:-49715641 None:intergenic
CATTGCATGATAGTGGTGTT+CGG 0.530302 3.1:+49718633 MS.gene008597:CDS
AAGTTTATGGATGTTGTTGA+AGG 0.545780 3.1:+49715660 MS.gene008597:CDS
TTGAAGAATATAGTGGAGAG+TGG 0.551385 3.1:+49719094 MS.gene008597:CDS
GTTATTGGACACATTGTGGT+TGG 0.552161 3.1:+49718771 MS.gene008597:CDS
GGGTTGATGTGTCCACGTGA+TGG 0.556261 3.1:-49715489 None:intergenic
TTTAAGGCATCAATTACTTG+AGG 0.558300 3.1:-49718398 None:intergenic
GTTGTCCAGAACGCAGCCAC+CGG 0.559166 3.1:-49715810 None:intergenic
TGACATGGTGTAACCAATTG+AGG 0.563941 3.1:+49718723 MS.gene008597:CDS
GGTTCAAGCTCATAAATTGA+AGG 0.569825 3.1:-49718377 None:intergenic
GGTTGATGTGTCCACGTGAT+GGG 0.577296 3.1:-49715488 None:intergenic
TAGTGGTGTTCGGTTCTTGT+GGG 0.577340 3.1:+49718643 MS.gene008597:CDS
TTGTCACATCCTTCTATAGG+TGG 0.578373 3.1:+49718749 MS.gene008597:CDS
GTCACCAACAACGTTAGGGA+TGG 0.579117 3.1:-49715637 None:intergenic
TGGTTGTTCTTATCAAGTAG+AGG 0.581501 3.1:-49718290 None:intergenic
TTGAAGATTGGAAAATTGGG+TGG 0.582495 3.1:+49718882 MS.gene008597:CDS
ATAGATTGAAACATATGTGT+GGG 0.584985 3.1:+49718684 MS.gene008597:CDS
AACATATGTGTGGGAAAATG+GGG 0.586799 3.1:+49718693 MS.gene008597:CDS
GCAGCTGCATTGCATGATAG+TGG 0.589317 3.1:+49718626 MS.gene008597:CDS
AATATCTGCTAGACGAACCC+AGG 0.590469 3.1:-49718267 None:intergenic
ATCTTGAAGATGAAACTCCA+TGG 0.604504 3.1:-49715415 None:intergenic
ACTTGCTTAGGTTCATCATG+GGG 0.613350 3.1:-49715509 None:intergenic
CCATTCTTGTGTGACAACAA+AGG 0.613860 3.1:-49715565 None:intergenic
AATAGATTGAAACATATGTG+TGG 0.615244 3.1:+49718683 MS.gene008597:CDS
AATGGCTGATCCATAGCAAG+AGG 0.616160 3.1:-49718842 None:intergenic
ATAGTGGTGTTCGGTTCTTG+TGG 0.616502 3.1:+49718642 MS.gene008597:CDS
TCGCAGATGATAAACGTCAC+TGG 0.620024 3.1:-49715741 None:intergenic
GACATGGTGTAACCAATTGA+GGG 0.630239 3.1:+49718724 MS.gene008597:CDS
TGATCGATTAACTGCTCGAA+CGG 0.637287 3.1:-49715705 None:intergenic
GGTGGTTATTGGACACATTG+TGG 0.638646 3.1:+49718767 MS.gene008597:CDS
TTGTGTCCAAGATTAAAGCA+AGG 0.669723 3.1:-49718464 None:intergenic
CAGATGATAAACGTCACTGG+TGG 0.678654 3.1:-49715738 None:intergenic
CAGTTCGTGTTGGAAACCGG+AGG 0.682058 3.1:+49715781 MS.gene008597:CDS
AAACCGGAGGAATATTCCGG+TGG 0.703022 3.1:+49715794 MS.gene008597:CDS
GTTGTTCCATACCCATCACG+TGG 0.709653 3.1:+49715477 MS.gene008597:CDS
GTGTGACAACAAAGGTGACA+AGG 0.723257 3.1:-49715557 None:intergenic
GGTATGGAACAACTATCACG+TGG 0.750419 3.1:-49715467 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATATTTGACAAATTTA+CGG + chr3.1:49718053-49718072 MS.gene008597:intron 10.0%
!! ACCAAAAAAAAAATATATAA+AGG + chr3.1:49716183-49716202 MS.gene008597:intron 10.0%
!! ATATAAATTATTAAAAATCC+AGG + chr3.1:49718005-49718024 MS.gene008597:intron 10.0%
!! ATTAATCTCTAAATAATATA+TGG - chr3.1:49717109-49717128 None:intergenic 10.0%
!! TATAAATTATTAAAAATCCA+GGG + chr3.1:49718006-49718025 MS.gene008597:intron 10.0%
!!! AAAATGTATTTAAAATTTGA+CGG + chr3.1:49716105-49716124 MS.gene008597:intron 10.0%
!!! AAATGTTTTTTCATATTAAT+CGG + chr3.1:49717044-49717063 MS.gene008597:intron 10.0%
!!! ACCTTTATATATTTTTTTTT+TGG - chr3.1:49716187-49716206 None:intergenic 10.0%
!!! ATAGTTTTTTTTTTTTTTGA+GGG + chr3.1:49716248-49716267 MS.gene008597:intron 10.0%
!!! CATCATTTTATAAAAAATAA+AGG - chr3.1:49716696-49716715 None:intergenic 10.0%
!!! CTTTATTTTTTATAAAATGA+TGG + chr3.1:49716694-49716713 MS.gene008597:intron 10.0%
!!! TATAGTTTTTTTTTTTTTTG+AGG + chr3.1:49716247-49716266 MS.gene008597:intron 10.0%
!! AAATTCTTTCAAAAAGTTAA+AGG + chr3.1:49717444-49717463 MS.gene008597:intron 15.0%
!! AACTTCTTAAAAACAATTTA+AGG + chr3.1:49716615-49716634 MS.gene008597:intron 15.0%
!! AATAAATGTATTTAGTAGAT+TGG + chr3.1:49716427-49716446 MS.gene008597:intron 15.0%
!! AATATATTTGACAAATTTAC+GGG + chr3.1:49718054-49718073 MS.gene008597:intron 15.0%
!! AATCTACTAAATACATTTAT+TGG - chr3.1:49716428-49716447 None:intergenic 15.0%
!! ATTACAAATTACTTAAAGTT+TGG - chr3.1:49717892-49717911 None:intergenic 15.0%
!! TTACAAATTACTTAAAGTTT+GGG - chr3.1:49717891-49717910 None:intergenic 15.0%
!! TTCTCTTTCAAAAAAATTTA+AGG + chr3.1:49716642-49716661 MS.gene008597:intron 15.0%
!! TTTATTGATAAAGAAATTCA+TGG + chr3.1:49718958-49718977 MS.gene008597:CDS 15.0%
!!! AATGTTTTTTCATATTAATC+GGG + chr3.1:49717045-49717064 MS.gene008597:intron 15.0%
!!! ACATATTATTTGAAGTTTTA+GGG + chr3.1:49717937-49717956 MS.gene008597:intron 15.0%
!!! ATCGTAAATTTTATTTTTGA+AGG - chr3.1:49716670-49716689 None:intergenic 15.0%
!!! GGATATATGTATTTAATTTA+TGG - chr3.1:49716859-49716878 None:intergenic 15.0%
!!! TACATATTATTTGAAGTTTT+AGG + chr3.1:49717936-49717955 MS.gene008597:intron 15.0%
!!! TAGTTTTGTTTAACATTTAA+AGG + chr3.1:49717418-49717437 MS.gene008597:intron 15.0%
!!! TATATGTATTTAATTTATGG+CGG - chr3.1:49716856-49716875 None:intergenic 15.0%
!!! TCAATTAAAAAACTAGTTTA+AGG - chr3.1:49717865-49717884 None:intergenic 15.0%
!!! TTAAATTTTTTTGAAAGAGA+AGG - chr3.1:49716643-49716662 None:intergenic 15.0%
!! AATAAATGTACTTAGTAGAT+TGG + chr3.1:49716471-49716490 MS.gene008597:intron 20.0%
!! ACAATAATCTTACTAATCAA+TGG - chr3.1:49718863-49718882 None:intergenic 20.0%
!! ATCTCTAAATAATATATGGT+TGG - chr3.1:49717105-49717124 None:intergenic 20.0%
!! ATTTAAAAATCATCAACTTG+TGG - chr3.1:49717481-49717500 None:intergenic 20.0%
!! TAACAATATCTTTACACAAT+TGG - chr3.1:49716880-49716899 None:intergenic 20.0%
!! TACATCAAAATTAAACTCAT+TGG - chr3.1:49716005-49716024 None:intergenic 20.0%
!!! AAAAATGAAAATTTTGAGCA+AGG - chr3.1:49717775-49717794 None:intergenic 20.0%
!!! AAAATGAAAATTTTGAGCAA+GGG - chr3.1:49717774-49717793 None:intergenic 20.0%
!!! ATTATTTTTTGTGCAGAAAA+TGG + chr3.1:49718212-49718231 MS.gene008597:intron 20.0%
!!! CAACTTTTTATACATACAAA+GGG - chr3.1:49716329-49716348 None:intergenic 20.0%
!!! TCAACTTTTTATACATACAA+AGG - chr3.1:49716330-49716349 None:intergenic 20.0%
! AAAAAAAATGGACGTTTGTT+AGG + chr3.1:49717601-49717620 MS.gene008597:intron 25.0%
! AAATACACTAAAAGTGATGA+AGG - chr3.1:49716721-49716740 None:intergenic 25.0%
! AATAGATTGAAACATATGTG+TGG + chr3.1:49718683-49718702 MS.gene008597:CDS 25.0%
! ATAGATTGAAACATATGTGT+GGG + chr3.1:49718684-49718703 MS.gene008597:CDS 25.0%
! ATGTATTTAGTAGATTGGAA+TGG + chr3.1:49716432-49716451 MS.gene008597:intron 25.0%
! ATGTTTATATTTAGTGACTG+AGG + chr3.1:49716537-49716556 MS.gene008597:intron 25.0%
! ATTATATTCCATCAAATTCC+TGG + chr3.1:49718249-49718268 MS.gene008597:CDS 25.0%
! ATTGTTGAAGATTGGAAAAT+TGG + chr3.1:49718878-49718897 MS.gene008597:CDS 25.0%
! CATAAAGACCCAAAAAAAAA+TGG + chr3.1:49717589-49717608 MS.gene008597:intron 25.0%
! GATAAAGAAATTCATGGATT+TGG + chr3.1:49718964-49718983 MS.gene008597:CDS 25.0%
! GTAAGATTATTGTTGAAGAT+TGG + chr3.1:49718870-49718889 MS.gene008597:CDS 25.0%
! TAACCAATCTATGTAACTTT+GGG - chr3.1:49718525-49718544 None:intergenic 25.0%
! TAACGTGATGATAGATATAA+TGG + chr3.1:49717294-49717313 MS.gene008597:intron 25.0%
! TCACATTTCAAAATACTTAG+TGG + chr3.1:49716360-49716379 MS.gene008597:intron 25.0%
! TCTCTAAATGCTACTAATAA+TGG + chr3.1:49718494-49718513 MS.gene008597:CDS 25.0%
! TGTATTTAGTAGATTGGAAT+GGG + chr3.1:49716433-49716452 MS.gene008597:intron 25.0%
! TTAACCAATCTATGTAACTT+TGG - chr3.1:49718526-49718545 None:intergenic 25.0%
! TTATATTCCATCAAATTCCT+GGG + chr3.1:49718250-49718269 MS.gene008597:CDS 25.0%
! TTCATATGGAAGTTATCTAT+CGG + chr3.1:49718577-49718596 MS.gene008597:CDS 25.0%
! TTGTTGAAGATTGGAAAATT+GGG + chr3.1:49718879-49718898 MS.gene008597:CDS 25.0%
!! AAAAAAATGGACGTTTGTTA+GGG + chr3.1:49717602-49717621 MS.gene008597:intron 25.0%
!! TCTGTTTTGTACATTTCATA+TGG + chr3.1:49718563-49718582 MS.gene008597:CDS 25.0%
!!! AACAAACGTCCATTTTTTTT+TGG - chr3.1:49717601-49717620 None:intergenic 25.0%
!!! AATTGTGAGCTTTGATTTTA+AGG - chr3.1:49718417-49718436 None:intergenic 25.0%
!!! ACAAACGTCCATTTTTTTTT+GGG - chr3.1:49717600-49717619 None:intergenic 25.0%
!!! ACATTTATTGGTTGTTTCTA+AGG - chr3.1:49716416-49716435 None:intergenic 25.0%
!!! ATGGATTTGGATTTTGATAT+AGG + chr3.1:49718977-49718996 MS.gene008597:CDS 25.0%
!!! ATTTGGATTTTGATATAGGA+AGG + chr3.1:49718981-49719000 MS.gene008597:CDS 25.0%
!!! TAATTTTTTTAACATGTCCC+TGG - chr3.1:49718026-49718045 None:intergenic 25.0%
!!! TTTGGATTTTGATATAGGAA+GGG + chr3.1:49718982-49719001 MS.gene008597:CDS 25.0%
AAACATATGTGTGGGAAAAT+GGG + chr3.1:49718692-49718711 MS.gene008597:CDS 30.0%
AACATACCTTGCTTTAATCT+TGG + chr3.1:49718458-49718477 MS.gene008597:CDS 30.0%
AAGTAAGATCTACATCTGAA+CGG + chr3.1:49716817-49716836 MS.gene008597:intron 30.0%
AAGTTTATGGATGTTGTTGA+AGG + chr3.1:49715660-49715679 MS.gene008597:CDS 30.0%
ACAATTCCCATTTACTCAAT+TGG + chr3.1:49718431-49718450 MS.gene008597:CDS 30.0%
ACCTTTATATTTAAGCACGT+AGG - chr3.1:49716154-49716173 None:intergenic 30.0%
AGATTAAAGCAAGGTATGTT+TGG - chr3.1:49718458-49718477 None:intergenic 30.0%
ATAAAATCCGATGTGTAAGT+TGG - chr3.1:49716989-49717008 None:intergenic 30.0%
ATGTACAAAACAGAACCATT+AGG - chr3.1:49718557-49718576 None:intergenic 30.0%
ATGTACTTAGTAGATTGGAA+TGG + chr3.1:49716476-49716495 MS.gene008597:intron 30.0%
CTCCACTATATTCTTCAAAA+AGG - chr3.1:49719092-49719111 None:intergenic 30.0%
CTGTTTGAGAATTCTTAAAC+TGG - chr3.1:49718110-49718129 None:intergenic 30.0%
GCAAGAGGAAATGTTAAAAA+AGG - chr3.1:49718830-49718849 None:intergenic 30.0%
GTATTTAGTAGATTGGAATG+GGG + chr3.1:49716434-49716453 MS.gene008597:intron 30.0%
TCAAAATACTTAGTGGTATC+AGG + chr3.1:49716367-49716386 MS.gene008597:intron 30.0%
TCCTACGTGCTTAAATATAA+AGG + chr3.1:49716150-49716169 MS.gene008597:intron 30.0%
TGATGATAGATATAATGGCA+TGG + chr3.1:49717299-49717318 MS.gene008597:intron 30.0%
TGGTTAAATCTTCAACCTAA+TGG + chr3.1:49718539-49718558 MS.gene008597:CDS 30.0%
TGTAATTATGTCCTCGAATT+GGG + chr3.1:49717906-49717925 MS.gene008597:intron 30.0%
TGTACTTAGTAGATTGGAAT+GGG + chr3.1:49716477-49716496 MS.gene008597:intron 30.0%
TTGTAATTATGTCCTCGAAT+TGG + chr3.1:49717905-49717924 MS.gene008597:intron 30.0%
TTTAACATTTCCTCTTGCTA+TGG + chr3.1:49718832-49718851 MS.gene008597:CDS 30.0%
TTTGGACCAATTGAGTAAAT+GGG - chr3.1:49718440-49718459 None:intergenic 30.0%
! ACAACCAACAAATTTTGCAA+TGG + chr3.1:49718306-49718325 MS.gene008597:CDS 30.0%
! CAACCAACAAATTTTGCAAT+GGG + chr3.1:49718307-49718326 MS.gene008597:CDS 30.0%
! CGAACCATGGATTATATAAA+GGG + chr3.1:49717235-49717254 MS.gene008597:intron 30.0%
! GATTCAACTTTTATGTTGTC+TGG - chr3.1:49715618-49715637 None:intergenic 30.0%
! TCGAACCATGGATTATATAA+AGG + chr3.1:49717234-49717253 MS.gene008597:intron 30.0%
! TTGACATATGAAGCATCAAA+TGG + chr3.1:49719118-49719137 MS.gene008597:CDS 30.0%
! TTTAAGGCATCAATTACTTG+AGG - chr3.1:49718401-49718420 None:intergenic 30.0%
! TTTTGATCCAACTTACACAT+CGG + chr3.1:49716979-49716998 MS.gene008597:intron 30.0%
!! ACTTTTATGTTGTCTGGTTT+TGG - chr3.1:49715612-49715631 None:intergenic 30.0%
!! AGCCTTTTTGAAGAATATAG+TGG + chr3.1:49719087-49719106 MS.gene008597:CDS 30.0%
!!! TCATTGAAGGTGTTTTTTCT+GGG + chr3.1:49718801-49718820 MS.gene008597:CDS 30.0%
!!! TTTTGGTTCAGAGTTTACTA+AGG - chr3.1:49715595-49715614 None:intergenic 30.0%
AACATATGTGTGGGAAAATG+GGG + chr3.1:49718693-49718712 MS.gene008597:CDS 35.0%
AAGTCCTTGACAAATGAAGT+CGG - chr3.1:49717738-49717757 None:intergenic 35.0%
AGATAAAGTCTTACACGTAC+TGG - chr3.1:49717325-49717344 None:intergenic 35.0%
ATATAATCCATGGTTCGATC+TGG - chr3.1:49717232-49717251 None:intergenic 35.0%
ATCCTTCTATAGGTGGTTAT+TGG + chr3.1:49718756-49718775 MS.gene008597:CDS 35.0%
ATTACCAGCTGAAGTATATC+TGG - chr3.1:49717263-49717282 None:intergenic 35.0%
ATTTGTCAAGGACTTTGCAA+GGG + chr3.1:49717743-49717762 MS.gene008597:intron 35.0%
CAGCTAGCAATAAAGAAAAG+TGG + chr3.1:49719043-49719062 MS.gene008597:CDS 35.0%
GAAACATATGTGTGGGAAAA+TGG + chr3.1:49718691-49718710 MS.gene008597:CDS 35.0%
GGATCCCTTTATATAATCCA+TGG - chr3.1:49717242-49717261 None:intergenic 35.0%
GGATGATAAGTTAGACACTT+TGG + chr3.1:49718916-49718935 MS.gene008597:CDS 35.0%
GGTTCAAGCTCATAAATTGA+AGG - chr3.1:49718380-49718399 None:intergenic 35.0%
GTAACCGTTTATTCAGAACA+GGG + chr3.1:49716389-49716408 MS.gene008597:intron 35.0%
GTACTTAGTAGATTGGAATG+GGG + chr3.1:49716478-49716497 MS.gene008597:intron 35.0%
GTATTGTCACATCCTTCTAT+AGG + chr3.1:49718746-49718765 MS.gene008597:CDS 35.0%
GTTTGGACCAATTGAGTAAA+TGG - chr3.1:49718441-49718460 None:intergenic 35.0%
TGGTTGTTCTTATCAAGTAG+AGG - chr3.1:49718293-49718312 None:intergenic 35.0%
TGTATTTGAATCCCAATTCG+AGG - chr3.1:49717920-49717939 None:intergenic 35.0%
TTGAAGATTGGAAAATTGGG+TGG + chr3.1:49718882-49718901 MS.gene008597:CDS 35.0%
TTGTGTCCAAGATTAAAGCA+AGG - chr3.1:49718467-49718486 None:intergenic 35.0%
! AGTTAATCGATCAGCTTGTT+CGG + chr3.1:49715715-49715734 MS.gene008597:CDS 35.0%
! ATCGGTTTCAAGAACACAAA+TGG + chr3.1:49718595-49718614 MS.gene008597:CDS 35.0%
! CTGCGATTGTTTTCTCTTTT+GGG + chr3.1:49715758-49715777 MS.gene008597:CDS 35.0%
! TCTGCGATTGTTTTCTCTTT+TGG + chr3.1:49715757-49715776 MS.gene008597:CDS 35.0%
! TTGAAGAATATAGTGGAGAG+TGG + chr3.1:49719094-49719113 MS.gene008597:CDS 35.0%
!! TGAAGGTGTTATGACTGAAA+TGG + chr3.1:49715677-49715696 MS.gene008597:CDS 35.0%
!!! CATTGAAGGTGTTTTTTCTG+GGG + chr3.1:49718802-49718821 MS.gene008597:CDS 35.0%
!!! GTCATTGAAGGTGTTTTTTC+TGG + chr3.1:49718800-49718819 MS.gene008597:CDS 35.0%
AACTTGTCACCAACAACGTT+AGG - chr3.1:49715645-49715664 None:intergenic 40.0%
AATTGGGTGGAGAGTGAAAA+AGG + chr3.1:49718895-49718914 MS.gene008597:CDS 40.0%
ACAAAGGTGACAAGGATGTT+AGG - chr3.1:49715552-49715571 None:intergenic 40.0%
ACAACGCAAGCATTTAGGTA+AGG + chr3.1:49715875-49715894 MS.gene008597:intron 40.0%
ACTTGCTTAGGTTCATCATG+GGG - chr3.1:49715512-49715531 None:intergenic 40.0%
ACTTGTCACCAACAACGTTA+GGG - chr3.1:49715644-49715663 None:intergenic 40.0%
CAAAGGTGACAAGGATGTTA+GGG - chr3.1:49715551-49715570 None:intergenic 40.0%
CAAATGAAGTCGGTTGGAAT+AGG - chr3.1:49717728-49717747 None:intergenic 40.0%
CATTTGTCAAGGACTTTGCA+AGG + chr3.1:49717742-49717761 MS.gene008597:intron 40.0%
CCATTCTTGTGTGACAACAA+AGG - chr3.1:49715568-49715587 None:intergenic 40.0%
CTGCCCAAAGTTACATAGAT+TGG + chr3.1:49718519-49718538 MS.gene008597:CDS 40.0%
GAAAAATTGCACCCACAACT+CGG - chr3.1:49715844-49715863 None:intergenic 40.0%
GACATGGTGTAACCAATTGA+GGG + chr3.1:49718724-49718743 MS.gene008597:CDS 40.0%
GAGCCCATTGCAAAATTTGT+TGG - chr3.1:49718313-49718332 None:intergenic 40.0%
GATGTGACAATACCCTCAAT+TGG - chr3.1:49718739-49718758 None:intergenic 40.0%
GCTTGCGTTGTAGGAAAATA+TGG - chr3.1:49715866-49715885 None:intergenic 40.0%
GGTAACCGTTTATTCAGAAC+AGG + chr3.1:49716388-49716407 MS.gene008597:intron 40.0%
GGTTGGAATTCTGTCATTGA+AGG + chr3.1:49718788-49718807 MS.gene008597:CDS 40.0%
GTCCAATAACCACCTATAGA+AGG - chr3.1:49718761-49718780 None:intergenic 40.0%
GTTATTGGACACATTGTGGT+TGG + chr3.1:49718771-49718790 MS.gene008597:CDS 40.0%
TACCTAAATGCTTGCGTTGT+AGG - chr3.1:49715875-49715894 None:intergenic 40.0%
TGACATGGTGTAACCAATTG+AGG + chr3.1:49718723-49718742 MS.gene008597:CDS 40.0%
TGATCGATTAACTGCTCGAA+CGG - chr3.1:49715708-49715727 None:intergenic 40.0%
TTCCTACAACGCAAGCATTT+AGG + chr3.1:49715870-49715889 MS.gene008597:CDS 40.0%
TTGTCACATCCTTCTATAGG+TGG + chr3.1:49718749-49718768 MS.gene008597:CDS 40.0%
! AGACACTTTGGTGACAAAAG+AGG + chr3.1:49718928-49718947 MS.gene008597:CDS 40.0%
! AGGTCCCTGTTCTGAATAAA+CGG - chr3.1:49716396-49716415 None:intergenic 40.0%
! CCTTTGTTGTCACACAAGAA+TGG + chr3.1:49715565-49715584 MS.gene008597:CDS 40.0%
! GACTTGCTTAGGTTCATCAT+GGG - chr3.1:49715513-49715532 None:intergenic 40.0%
!! ATAGTGGCTTTTGGTGATTG+TGG - chr3.1:49715441-49715460 None:intergenic 40.0%
!! CATTGCATGATAGTGGTGTT+CGG + chr3.1:49718633-49718652 MS.gene008597:CDS 40.0%
!! CGTTGTTGGTGACAAGTTTA+TGG + chr3.1:49715647-49715666 MS.gene008597:CDS 40.0%
!! GACGTTTGTTAGGGTTTTGT+CGG + chr3.1:49717611-49717630 MS.gene008597:intron 40.0%
!! GGGCTCTAAAAAGTTGTCAA+TGG + chr3.1:49718327-49718346 MS.gene008597:CDS 40.0%
!! TAGAGACAAGTGACTTGCTT+AGG - chr3.1:49715524-49715543 None:intergenic 40.0%
!! TGACTTGCTTAGGTTCATCA+TGG - chr3.1:49715514-49715533 None:intergenic 40.0%
AAATGGGGTTTGTGGTGACA+TGG + chr3.1:49718708-49718727 MS.gene008597:CDS 45.0%
AATATCTGCTAGACGAACCC+AGG - chr3.1:49718270-49718289 None:intergenic 45.0%
AATCCATGGTTCGATCTGGT+TGG - chr3.1:49717228-49717247 None:intergenic 45.0%
AATGGCTGATCCATAGCAAG+AGG - chr3.1:49718845-49718864 None:intergenic 45.0%
AGACGAACCCAGGAATTTGA+TGG - chr3.1:49718260-49718279 None:intergenic 45.0%
ATACCAACCAGATCGAACCA+TGG + chr3.1:49717222-49717241 MS.gene008597:intron 45.0%
ATAGTGGTGTTCGGTTCTTG+TGG + chr3.1:49718642-49718661 MS.gene008597:CDS 45.0%
ATGAAGTCGGTTGGAATAGG+TGG - chr3.1:49717725-49717744 None:intergenic 45.0%
CAGATGATAAACGTCACTGG+TGG - chr3.1:49715741-49715760 None:intergenic 45.0%
CCTTGACAAATGAAGTCGGT+TGG - chr3.1:49717734-49717753 None:intergenic 45.0%
GAATCCATCCCTAACGTTGT+TGG + chr3.1:49715633-49715652 MS.gene008597:CDS 45.0%
GGATCCAGATATACTTCAGC+TGG + chr3.1:49717256-49717275 MS.gene008597:intron 45.0%
GGTATGGAACAACTATCACG+TGG - chr3.1:49715470-49715489 None:intergenic 45.0%
GGTGGTTATTGGACACATTG+TGG + chr3.1:49718767-49718786 MS.gene008597:CDS 45.0%
GTGTGACAACAAAGGTGACA+AGG - chr3.1:49715560-49715579 None:intergenic 45.0%
TAGTGGTGTTCGGTTCTTGT+GGG + chr3.1:49718643-49718662 MS.gene008597:CDS 45.0%
TATCACGTGGCTCTTGATAG+TGG - chr3.1:49715457-49715476 None:intergenic 45.0%
TCGCAGATGATAAACGTCAC+TGG - chr3.1:49715744-49715763 None:intergenic 45.0%
TGGAAACCGGAGGAATATTC+CGG + chr3.1:49715791-49715810 MS.gene008597:CDS 45.0%
! CCAACCGACTTCATTTGTCA+AGG + chr3.1:49717731-49717750 MS.gene008597:intron 45.0%
! CTATGCAAGGGCTTTTGTCA+GGG - chr3.1:49717672-49717691 None:intergenic 45.0%
!! GTTTGTTAGGGTTTTGTCGG+CGG + chr3.1:49717614-49717633 MS.gene008597:intron 45.0%
!!! TGGCTCTTGATAGTGGCTTT+TGG - chr3.1:49715450-49715469 None:intergenic 45.0%
!! TAATAATAAAAATAAAGAAT+AGG + chr3.1:49716743-49716762 MS.gene008597:intron 5.0%
!!! TTTTTAAACTAAAAAAAATA+TGG + chr3.1:49717504-49717523 MS.gene008597:intron 5.0%
AAACCGGAGGAATATTCCGG+TGG + chr3.1:49715794-49715813 MS.gene008597:CDS 50.0%
AACGTCAACGTCCGAGTTGT+GGG + chr3.1:49715830-49715849 MS.gene008597:CDS 50.0%
AGGTGGCAAAGGCTATGACA+GGG - chr3.1:49717708-49717727 None:intergenic 50.0%
GCAGCTGCATTGCATGATAG+TGG + chr3.1:49718626-49718645 MS.gene008597:CDS 50.0%
GTCACCAACAACGTTAGGGA+TGG - chr3.1:49715640-49715659 None:intergenic 50.0%
GTGTGGGAAAATGGGGTTTG+TGG + chr3.1:49718700-49718719 MS.gene008597:CDS 50.0%
GTTGTTCCATACCCATCACG+TGG + chr3.1:49715477-49715496 MS.gene008597:CDS 50.0%
TAGGTGGCAAAGGCTATGAC+AGG - chr3.1:49717709-49717728 None:intergenic 50.0%
TCGGTTGGAATAGGTGGCAA+AGG - chr3.1:49717719-49717738 None:intergenic 50.0%
TTGTCGGCGGTTAAACCTCT+GGG + chr3.1:49717627-49717646 MS.gene008597:intron 50.0%
TTTGTCGGCGGTTAAACCTC+TGG + chr3.1:49717626-49717645 MS.gene008597:intron 50.0%
! AAACCTCTGGGAAACTTGCG+AGG + chr3.1:49717639-49717658 MS.gene008597:intron 50.0%
! AACCTCTGGGAAACTTGCGA+GGG + chr3.1:49717640-49717659 MS.gene008597:intron 50.0%
! CTCTTTTGGGCAGTTCGTGT+TGG + chr3.1:49715771-49715790 MS.gene008597:CDS 50.0%
! GCTATGCAAGGGCTTTTGTC+AGG - chr3.1:49717673-49717692 None:intergenic 50.0%
! GGTTGATGTGTCCACGTGAT+GGG - chr3.1:49715491-49715510 None:intergenic 50.0%
!! ATGTGTCCACGTGATGGGTA+TGG - chr3.1:49715486-49715505 None:intergenic 50.0%
ATATTCCGGTGGCTGCGTTC+TGG + chr3.1:49715805-49715824 MS.gene008597:CDS 55.0%
CAACGTCAACGTCCGAGTTG+TGG + chr3.1:49715829-49715848 MS.gene008597:CDS 55.0%
CAGCCACCGGAATATTCCTC+CGG - chr3.1:49715800-49715819 None:intergenic 55.0%
CAGTTCGTGTTGGAAACCGG+AGG + chr3.1:49715781-49715800 MS.gene008597:CDS 55.0%
CTATGACAGGGGTCGAGTGA+GGG - chr3.1:49717696-49717715 None:intergenic 55.0%
GGGCAGTTCGTGTTGGAAAC+CGG + chr3.1:49715778-49715797 MS.gene008597:CDS 55.0%
GGTGGCAAAGGCTATGACAG+GGG - chr3.1:49717707-49717726 None:intergenic 55.0%
TATGACAGGGGTCGAGTGAG+GGG - chr3.1:49717695-49717714 None:intergenic 55.0%
TCGAGTGAGGGGCTATGCAA+GGG - chr3.1:49717684-49717703 None:intergenic 55.0%
TTCCCTCGCAAGTTTCCCAG+AGG - chr3.1:49717645-49717664 None:intergenic 55.0%
!! GGGTTGATGTGTCCACGTGA+TGG - chr3.1:49715492-49715511 None:intergenic 55.0%
GCTATGACAGGGGTCGAGTG+AGG - chr3.1:49717697-49717716 None:intergenic 60.0%
GTCGAGTGAGGGGCTATGCA+AGG - chr3.1:49717685-49717704 None:intergenic 60.0%
GTTGTCCAGAACGCAGCCAC+CGG - chr3.1:49715813-49715832 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 49715417 49719180 49715417 ID=MS.gene008597
chr3.1 mRNA 49715417 49719180 49715417 ID=MS.gene008597.t1;Parent=MS.gene008597
chr3.1 exon 49715417 49715891 49715417 ID=MS.gene008597.t1.exon1;Parent=MS.gene008597.t1
chr3.1 CDS 49715417 49715891 49715417 ID=cds.MS.gene008597.t1;Parent=MS.gene008597.t1
chr3.1 exon 49718228 49719180 49718228 ID=MS.gene008597.t1.exon2;Parent=MS.gene008597.t1
chr3.1 CDS 49718228 49719180 49718228 ID=cds.MS.gene008597.t1;Parent=MS.gene008597.t1
Gene Sequence

>MS.gene008597

ATGGAGTTTCATCTTCAAGATCCACAATCACCAAAAGCCACTATCAAGAGCCACGTGATAGTTGTTCCATACCCATCACGTGGACACATCAACCCCATGATGAACCTAAGCAAGTCACTTGTCTCTAATAACCCTAACATCCTTGTCACCTTTGTTGTCACACAAGAATGGCTAACCTTAGTAAACTCTGAACCAAAACCAGACAACATAAAAGTTGAATCCATCCCTAACGTTGTTGGTGACAAGTTTATGGATGTTGTTGAAGGTGTTATGACTGAAATGGAAGCGCCGTTCGAGCAGTTAATCGATCAGCTTGTTCGGCCACCAGTGACGTTTATCATCTGCGATTGTTTTCTCTTTTGGGCAGTTCGTGTTGGAAACCGGAGGAATATTCCGGTGGCTGCGTTCTGGACAACGTCAACGTCCGAGTTGTGGGTGCAATTTTTCCATATTTTCCTACAACGCAAGCATTTAGGTAAGGACAATTTTTTTATATAGTTATGTTATTTTCACAATTTTTAGTCTTTAAGTATTAATTATTTAAAAAACAAAATGTATAATATATTATAATTTTTTTATAAAATACCAATGAGTTTAATTTTGATGTAGTTTCATATAAAAGAAATGCACTATCAACAAATTACACTCGTTCATATTTATGATTTATAAAGTAATTATAATAAAAGTTAAAATGTATTTAAAATTTGACGGTTATGATTGATTGATATGTATTTCCTACGTGCTTAAATATAAAGGTTTATTTTGTACCAAAAAAAAAATATATAAAGGTTTATTGTAAATTTCAGTTTTATCAAGAAAATTTATAGTAGTATAGTTTTTTTTTTTTTTGAGGGAAAATTTAGTAATATAGTTAGAAAGTTTATTTTATGTATGAATGTACATAAAATACCCTTTGTATGTATAAAAAGTTGATGTTGATTTTTCACATTTCAAAATACTTAGTGGTATCAGGTAACCGTTTATTCAGAACAGGGACCTTAGAAACAACCAATAAATGTATTTAGTAGATTGGAATGGGGATTATATTTAAAGAAATAAATGTACTTAGTAGATTGGAATGGGGATTATATTTAAAGATAAACTTTATTTTGTCAAATTTATGTTTATATTTAGTGACTGAGGAAGTAGATTTTTTTTGCAATTATAGTTTATATAAATTAAGAATGTGTCTAATATGAACTTCTTAAAAACAATTTAAGGATCCTTCTCTTTCAAAAAAATTTAAGGATCCTTCAAAAATAAAATTTACGATGAACCTTTATTTTTTATAAAATGATGGACCTTCATCACTTTTAGTGTATTTCATAATAATAAAAATAAAGAATAGGCATAATATATTTTATTAAAATTAGTAAGATTTACATCTTATTTAAAAAAAAAAGTAAGATCTACATCTGAACGGTGCATAGTAGACGCCGCCATAAATTAAATACATATATCCAATTGTGTAAAGATATTGTTAGATAAATACATATTTTCTTTCAAAAAAAAGAAGATAAATACATTTTTAAACAATCATATTTGTTTTTATTATACAAACATTTTGATCCAACTTACACATCGGATTTTATTTATTAAAACAAGAATAGTAGTTGAATATTCTGACAAATGTTTTTTCATATTAATCGGGATCGAACTATAGATTAAACGATTAATTAAAAGATCCAACCATATATTATTTAGAGATTAATTATTTTAAACTAACTGAGATCTATTTTTCTTTTTTTTGATAAACAACTGAAATTTATTTAAGAAATAGTATCTTTTTCAATGAATGTCTTTTCATACCAACCAGATCGAACCATGGATTATATAAAGGGATCCAGATATACTTCAGCTGGTAATAATAGACTGCATAACGTGATGATAGATATAATGGCATGGCCAGTACGTGTAAGACTTTATCTCAAATCAACTTTTTTTTTTGTTTTTACTTGTTGTAATAGAATAGCAGAAAGAAGAATCTAGATCTACAATAGTTAGTTTTGTTTAACATTTAAAGGTTTAAATTCTTTCAAAAAGTTAAAGGTTTAAATTATTCCACAAGTTGATGATTTTTAAATAGATTTTTAAACTAAAAAAAATATGGAATTAAACTCACTACAAGAAATCTGTCAATTTGTCAAGAGCACAAAATCTCTATTAAAAGCGCATAAAGACCCAAAAAAAAATGGACGTTTGTTAGGGTTTTGTCGGCGGTTAAACCTCTGGGAAACTTGCGAGGGAAAAGACCCTGACAAAAGCCCTTGCATAGCCCCTCACTCGACCCCTGTCATAGCCTTTGCCACCTATTCCAACCGACTTCATTTGTCAAGGACTTTGCAAGGGACATGCCCTTGCTCAAAATTTTCATTTTTTTTTTAAAAAAAAAATTATTTAAAAAATCAATAATAAGTTGATTAAAAATCATTTTCATTTGTACATCCTTAAACTAGTTTTTTAATTGAACACCCAAACTTTAAGTAATTTGTAATTATGTCCTCGAATTGGGATTCAAATACATATTATTTGAAGTTTTAGGGATTTAATTAAAATTAATTATTTAAAAGTTTAAGAGAGATAAATGAATATAAATTATTAAAAATCCAGGGACATGTTAAAAAAATTATCTAATTAAATATATTTGACAAATTTACGGGCACACATGCTATTATTTTTTAGTATAGAGTCCAGTTTAAGAATTCTCAAACAGTTTTGACATGTTAAAATGACATGAAAAGTGAGTGACACATTATATTTTCAATCATAAGTTCATAACTGAATAAACACAAACTATTATTTTTTGTGCAGAAAATGGTGAAGATTATATCGATTATATTCCATCAAATTCCTGGGTTCGTCTAGCAGATATTCCTCTACTTGATAAGAACAACCAACAAATTTTGCAATGGGCTCTAAAAAGTTGTCAATGGCTTCTCAAAGCACAATATCTATTACTACCTTCAATTTATGAGCTTGAACCTCAAGTAATTGATGCCTTAAAATCAAAGCTCACAATTCCCATTTACTCAATTGGTCCAAACATACCTTGCTTTAATCTTGGACACAACTCAAATTCTCTAAATGCTACTAATAATGGTGCTGCCCAAAGTTACATAGATTGGTTAAATCTTCAACCTAATGGTTCTGTTTTGTACATTTCATATGGAAGTTATCTATCGGTTTCAAGAACACAAATGGATGAAATTGCAGCTGCATTGCATGATAGTGGTGTTCGGTTCTTGTGGGTAACGCGCGACGATACTAATAGATTGAAACATATGTGTGGGAAAATGGGGTTTGTGGTGACATGGTGTAACCAATTGAGGGTATTGTCACATCCTTCTATAGGTGGTTATTGGACACATTGTGGTTGGAATTCTGTCATTGAAGGTGTTTTTTCTGGGGTTCCTTTTTTAACATTTCCTCTTGCTATGGATCAGCCATTGATTAGTAAGATTATTGTTGAAGATTGGAAAATTGGGTGGAGAGTGAAAAAGGATGATAAGTTAGACACTTTGGTGACAAAAGAGGAAATTGTTTTATTGATAAAGAAATTCATGGATTTGGATTTTGATATAGGAAGGGATTTGAGAAAAAGAGCAAAAGAGTTTCAGCTTTTATGTCAGCTAGCAATAAAGAAAAGTGGATCTTCTGCAATGAATGTTAAAGCCTTTTTGAAGAATATAGTGGAGAGTGGTTTGACATATGAAGCATCAAATGGAATACATGAAGTTCAAGTTGCTATTGAGAATTTCAATTAA
Protein sequence

>MS.gene008597.t1

MEFHLQDPQSPKATIKSHVIVVPYPSRGHINPMMNLSKSLVSNNPNILVTFVVTQEWLTLVNSEPKPDNIKVESIPNVVGDKFMDVVEGVMTEMEAPFEQLIDQLVRPPVTFIICDCFLFWAVRVGNRRNIPVAAFWTTSTSELWVQFFHIFLQRKHLENGEDYIDYIPSNSWVRLADIPLLDKNNQQILQWALKSCQWLLKAQYLLLPSIYELEPQVIDALKSKLTIPIYSIGPNIPCFNLGHNSNSLNATNNGAAQSYIDWLNLQPNGSVLYISYGSYLSVSRTQMDEIAAALHDSGVRFLWVTRDDTNRLKHMCGKMGFVVTWCNQLRVLSHPSIGGYWTHCGWNSVIEGVFSGVPFLTFPLAMDQPLISKIIVEDWKIGWRVKKDDKLDTLVTKEEIVLLIKKFMDLDFDIGRDLRKRAKEFQLLCQLAIKKSGSSAMNVKAFLKNIVESGLTYEASNGIHEVQVAIENFN