AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene073187


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene073187.t1 MTR_2g083480 79.431 457 80 1 1 443 1 457 0.0 737
MS.gene073187.t1 MTR_2g083420 76.638 458 69 2 1 444 1 434 0.0 723
MS.gene073187.t1 MTR_2g083390 76.035 459 72 2 1 445 1 435 0.0 721
MS.gene073187.t1 MTR_2g083430 77.753 454 87 1 5 444 5 458 0.0 701
MS.gene073187.t1 MTR_2g083380 65.284 458 145 2 1 444 18 475 0.0 597
MS.gene073187.t1 MTR_2g083490 64.052 459 151 1 1 445 1 459 0.0 597
MS.gene073187.t1 MTR_4g079250 58.043 460 175 5 1 444 1 458 0.0 548
MS.gene073187.t1 MTR_4g079270 57.391 460 178 4 1 444 1 458 0.0 548
MS.gene073187.t1 MTR_2g083360 62.693 453 50 6 6 444 27 374 0.0 521
MS.gene073187.t1 MTR_2g014900 55.876 451 184 2 8 444 7 456 0.0 518
MS.gene073187.t1 MTR_2g086283 53.580 433 103 4 11 443 1 335 7.32e-151 432
MS.gene073187.t1 MTR_1g090270 38.661 463 246 11 7 443 14 464 4.93e-105 320
MS.gene073187.t1 MTR_4g059370 39.344 305 166 7 148 443 97 391 5.24e-72 232
MS.gene073187.t1 MTR_7g067330 33.481 451 262 13 2 441 3 426 6.55e-68 223
MS.gene073187.t1 MTR_7g067120 34.071 452 258 14 2 441 3 426 1.31e-66 219
MS.gene073187.t1 MTR_8g068330 30.769 468 290 13 1 441 1 461 4.72e-66 219
MS.gene073187.t1 MTR_8g068360 32.735 446 256 14 7 419 11 445 7.65e-64 213
MS.gene073187.t1 MTR_4g123553 31.429 455 284 14 6 441 13 458 4.90e-63 211
MS.gene073187.t1 MTR_8g068340 31.983 469 271 15 7 441 11 465 3.46e-62 209
MS.gene073187.t1 MTR_2g083440 93.204 103 7 0 343 445 11 113 4.93e-61 194
MS.gene073187.t1 MTR_2g008226 32.839 472 271 17 6 442 8 468 3.48e-60 204
MS.gene073187.t1 MTR_6g036650 30.169 474 282 13 1 441 11 468 3.57e-59 201
MS.gene073187.t1 MTR_2g008225 29.870 462 293 10 2 440 9 462 4.67e-59 201
MS.gene073187.t1 MTR_2g008220 31.034 464 285 13 2 440 8 461 5.36e-58 198
MS.gene073187.t1 MTR_2g014930 42.029 276 92 7 17 291 9 217 7.74e-58 190
MS.gene073187.t1 MTR_6g042310 31.236 461 275 15 7 441 17 461 1.31e-57 197
MS.gene073187.t1 MTR_4g079280 42.791 215 90 2 11 224 1 183 5.46e-54 178
MS.gene073187.t1 MTR_2g046620 29.670 455 292 13 6 441 14 459 1.40e-53 186
MS.gene073187.t1 MTR_4g077960 28.348 448 285 15 17 441 1 435 1.33e-46 167
MS.gene073187.t1 MTR_5g066410 31.002 429 259 11 11 415 1 416 3.06e-46 166
MS.gene073187.t1 MTR_3g435310 27.928 444 270 14 6 441 16 417 7.46e-46 164
MS.gene073187.t1 MTR_8g007650 31.027 448 259 13 7 418 6 439 1.01e-45 165
MS.gene073187.t1 MTR_8g007565 30.405 444 267 11 7 418 6 439 1.27e-45 165
MS.gene073187.t1 MTR_1g090280 38.942 208 115 5 247 443 108 314 1.45e-42 152
MS.gene073187.t1 MTR_8g071070 27.292 469 304 14 8 443 7 471 7.00e-35 135
MS.gene073187.t1 MTR_5g087620 26.752 471 270 16 8 419 10 464 6.65e-33 130
MS.gene073187.t1 MTR_8g066610 26.860 484 302 16 6 445 7 482 9.10e-33 129
MS.gene073187.t1 MTR_4g031800 27.386 482 293 19 6 445 7 473 9.12e-33 129
MS.gene073187.t1 MTR_0009s0240 25.054 459 317 13 8 443 7 461 7.33e-32 127
MS.gene073187.t1 MTR_4g485590 28.070 399 235 12 8 380 9 381 2.65e-30 121
MS.gene073187.t1 MTR_8g465670 26.509 464 264 18 9 420 8 446 5.94e-30 121
MS.gene073187.t1 MTR_8g009055 28.603 458 265 19 7 421 5 443 1.04e-29 120
MS.gene073187.t1 MTR_2g098430 23.965 459 292 13 9 423 7 452 2.28e-29 120
MS.gene073187.t1 MTR_8g009050 27.696 473 250 19 7 421 5 443 1.29e-28 117
MS.gene073187.t1 MTR_8g009073 27.851 456 269 21 7 421 5 441 1.57e-28 117
MS.gene073187.t1 MTR_6g023665 27.193 456 258 18 9 414 14 445 5.18e-28 116
MS.gene073187.t1 MTR_8g006220 25.847 472 265 16 9 420 7 453 2.77e-27 114
MS.gene073187.t1 MTR_1g062380 25.376 465 275 20 7 411 15 467 1.26e-26 112
MS.gene073187.t1 MTR_6g033615 27.069 447 254 17 9 414 5 420 1.30e-26 112
MS.gene073187.t1 MTR_8g008990 27.948 458 270 18 7 421 5 445 2.29e-26 111
MS.gene073187.t1 MTR_8g027870 26.316 494 262 20 5 438 16 467 5.19e-26 110
MS.gene073187.t1 MTR_4g485630 25.056 443 303 12 7 422 8 448 5.20e-26 110
MS.gene073187.t1 MTR_8g027885 26.506 498 256 20 5 438 16 467 7.31e-26 110
MS.gene073187.t1 MTR_4g117980 24.524 473 283 18 1 419 4 456 7.35e-26 110
MS.gene073187.t1 MTR_5g045970 26.190 462 290 16 7 421 15 472 8.52e-26 110
MS.gene073187.t1 MTR_3g009510 33.333 210 121 4 222 415 241 447 9.96e-26 109
MS.gene073187.t1 MTR_6g488280 26.872 454 262 16 9 414 7 438 1.14e-25 109
MS.gene073187.t1 MTR_0428s0010 26.872 454 262 16 9 414 7 438 1.14e-25 109
MS.gene073187.t1 MTR_8g009073 31.408 277 168 9 160 421 43 312 1.23e-25 107
MS.gene073187.t1 MTR_7g102460 26.004 473 279 20 5 422 6 462 1.70e-25 108
MS.gene073187.t1 MTR_6g033625 25.455 440 284 14 9 414 5 434 1.85e-25 108
MS.gene073187.t1 MTR_7g070740 25.164 457 290 14 7 419 10 458 2.27e-25 108
MS.gene073187.t1 MTR_7g013220 25.934 455 287 20 8 431 5 440 4.50e-25 107
MS.gene073187.t1 MTR_0184s0030 34.722 216 117 6 223 420 234 443 5.43e-25 107
MS.gene073187.t1 MTR_8g006260 30.147 272 165 10 170 430 198 455 9.67e-25 106
MS.gene073187.t1 MTR_4g485620 25.740 439 283 14 20 422 1 432 1.15e-24 106
MS.gene073187.t1 MTR_7g117170 35.450 189 106 5 245 421 268 452 1.26e-24 106
MS.gene073187.t1 MTR_8g012635 33.333 234 130 7 222 438 242 466 2.02e-24 105
MS.gene073187.t1 MTR_5g035560 25.602 457 262 19 7 422 10 429 2.39e-24 105
MS.gene073187.t1 MTR_0078s0060 29.104 268 155 9 170 422 195 442 2.95e-24 105
MS.gene073187.t1 MTR_6g038220 25.536 466 269 18 8 434 11 437 4.68e-24 104
MS.gene073187.t1 MTR_2g046820 36.818 220 124 7 222 430 236 451 5.03e-24 104
MS.gene073187.t1 MTR_5g035580 36.788 193 107 7 238 426 257 438 5.82e-24 104
MS.gene073187.t1 MTR_1g107350 25.870 460 287 17 1 421 1 445 8.30e-24 103
MS.gene073187.t1 MTR_8g012730 33.484 221 128 5 214 418 69 286 8.47e-24 101
MS.gene073187.t1 MTR_8g009067 31.321 265 151 9 170 421 77 323 1.01e-23 102
MS.gene073187.t1 MTR_8g009063 26.923 468 259 17 7 422 12 448 1.04e-23 103
MS.gene073187.t1 MTR_8g009067 31.321 265 151 9 170 421 195 441 1.16e-23 103
MS.gene073187.t1 MTR_6g038200 25.652 460 277 17 8 434 11 438 1.34e-23 103
MS.gene073187.t1 MTR_7g070660 23.690 439 292 14 7 407 10 443 1.74e-23 103
MS.gene073187.t1 MTR_7g013200 25.581 430 275 15 8 413 5 413 2.79e-23 102
MS.gene073187.t1 MTR_6g038230 25.551 454 285 17 8 434 11 438 3.40e-23 102
MS.gene073187.t1 MTR_5g098930 23.237 482 308 13 7 442 4 469 4.70e-23 101
MS.gene073187.t1 MTR_8g074550 23.457 486 284 19 1 420 1 464 5.19e-23 101
MS.gene073187.t1 MTR_4g024020 25.322 466 292 18 3 419 4 462 5.23e-23 101
MS.gene073187.t1 MTR_5g098960 26.739 460 247 22 1 412 1 418 5.75e-23 101
MS.gene073187.t1 MTR_7g102490 25.806 465 286 19 5 419 6 461 6.00e-23 101
MS.gene073187.t1 MTR_6g005600 28.904 301 173 9 154 439 179 453 6.25e-23 101
MS.gene073187.t1 MTR_1g019520 31.797 217 129 5 244 445 5 217 7.37e-23 96.7
MS.gene073187.t1 MTR_0184s0040 32.979 188 112 5 245 422 275 458 7.85e-23 101
MS.gene073187.t1 MTR_0078s0190 32.979 188 112 5 245 422 275 458 7.85e-23 101
MS.gene073187.t1 MTR_8g083280 33.047 233 120 9 227 435 249 469 8.44e-23 100
MS.gene073187.t1 MTR_7g013180 25.882 425 272 14 8 405 5 413 8.55e-23 100
MS.gene073187.t1 MTR_8g006710 33.516 182 108 3 245 414 259 439 1.11e-22 100
MS.gene073187.t1 MTR_7g055710 23.778 450 293 13 7 413 10 452 1.13e-22 100
MS.gene073187.t1 MTR_8g006730 35.165 182 105 4 245 414 260 440 1.17e-22 100
MS.gene073187.t1 MTR_8g012650 32.569 218 126 5 222 425 242 452 1.50e-22 100
MS.gene073187.t1 MTR_3g079480 25.202 496 287 23 8 445 21 490 2.09e-22 99.8
MS.gene073187.t1 MTR_7g102560 25.974 462 286 17 5 419 6 458 4.20e-22 99.0
MS.gene073187.t1 MTR_7g102520 26.522 460 287 17 7 422 11 463 4.39e-22 99.0
MS.gene073187.t1 MTR_8g466240 30.846 201 122 6 198 384 202 399 4.60e-22 98.6
MS.gene073187.t1 MTR_2g046750 35.455 220 127 7 222 430 239 454 5.12e-22 98.6
MS.gene073187.t1 MTR_8g006270 27.273 275 170 8 153 413 178 436 5.96e-22 98.6
MS.gene073187.t1 MTR_8g012630 33.871 186 105 5 245 414 206 389 6.85e-22 97.8
MS.gene073187.t1 MTR_7g071040 23.928 443 289 14 7 413 16 446 7.73e-22 98.2
MS.gene073187.t1 MTR_0078s0010 34.225 187 109 5 245 421 260 442 1.09e-21 97.4
MS.gene073187.t1 MTR_6g033725 34.483 174 108 4 244 415 263 432 1.20e-21 97.4
MS.gene073187.t1 MTR_7g070910 23.581 458 297 16 7 419 10 459 1.26e-21 97.4
MS.gene073187.t1 MTR_4g485640 26.376 436 264 19 18 414 219 636 1.30e-21 98.2
MS.gene073187.t1 MTR_7g117405 26.013 469 280 20 2 422 9 458 1.31e-21 97.4
MS.gene073187.t1 MTR_0536s0010 25.499 451 291 18 3 421 16 453 1.40e-21 97.4
MS.gene073187.t1 MTR_4g082820 27.123 424 256 15 7 387 6 419 1.56e-21 97.1
MS.gene073187.t1 MTR_4g117950 25.835 449 287 16 6 421 4 439 1.57e-21 97.1
MS.gene073187.t1 MTR_2g040530 32.039 206 128 4 245 440 261 464 2.27e-21 96.7
MS.gene073187.t1 MTR_7g070610 22.707 458 289 15 7 413 12 455 3.84e-21 96.3
MS.gene073187.t1 MTR_2g034990 24.169 451 291 15 1 408 4 446 4.23e-21 95.9
MS.gene073187.t1 MTR_7g046490 33.862 189 109 5 244 420 255 439 4.71e-21 95.5
MS.gene073187.t1 MTR_6g038240 32.749 171 104 6 245 415 266 425 7.00e-21 95.1
MS.gene073187.t1 MTR_3g479520 23.625 491 301 19 8 445 15 484 7.10e-21 95.1
MS.gene073187.t1 MTR_7g070940 23.874 444 297 15 7 414 8 446 7.61e-21 95.1
MS.gene073187.t1 MTR_7g070810 24.554 448 292 14 7 414 8 449 7.75e-21 95.1
MS.gene073187.t1 MTR_3g049970 26.211 454 283 19 6 421 7 446 7.77e-21 95.1
MS.gene073187.t1 MTR_4g082810 28.642 405 233 15 7 370 6 395 1.26e-20 94.0
MS.gene073187.t1 MTR_1g019510 32.804 189 112 4 244 421 256 440 1.39e-20 94.4
MS.gene073187.t1 MTR_8g077590 31.527 203 126 4 223 414 240 440 1.47e-20 94.4
MS.gene073187.t1 MTR_7g047030 33.155 187 111 5 245 421 260 442 1.47e-20 94.4
MS.gene073187.t1 MTR_7g047270 33.155 187 111 5 245 421 260 442 1.47e-20 94.4
MS.gene073187.t1 MTR_6g038300 25.508 443 268 17 8 415 11 426 1.67e-20 94.0
MS.gene073187.t1 MTR_7g102550 24.116 481 305 18 8 438 9 479 1.70e-20 94.0
MS.gene073187.t1 MTR_3g069690 32.065 184 116 5 239 421 251 426 1.98e-20 93.6
MS.gene073187.t1 MTR_7g070930 23.529 459 296 16 7 419 13 462 2.10e-20 94.0
MS.gene073187.t1 MTR_5g019580 30.418 263 154 7 169 413 222 473 2.76e-20 93.6
MS.gene073187.t1 MTR_8g064880 25.339 442 255 18 6 396 7 424 2.79e-20 93.6
MS.gene073187.t1 MTR_5g019580 30.418 263 154 7 169 413 198 449 3.42e-20 93.2
MS.gene073187.t1 MTR_2g035020 24.336 452 289 18 1 408 4 446 3.61e-20 93.2
MS.gene073187.t1 MTR_8g083290 32.961 179 113 5 245 422 269 441 3.80e-20 92.8
MS.gene073187.t1 MTR_5g090610 29.694 229 138 6 217 424 218 444 3.93e-20 92.8
MS.gene073187.t1 MTR_5g045960 25.672 409 265 15 7 380 8 412 4.32e-20 92.8
MS.gene073187.t1 MTR_6g035185 23.579 475 286 18 1 419 4 457 4.76e-20 92.8
MS.gene073187.t1 MTR_4g117960 23.517 472 288 16 1 419 4 455 5.01e-20 92.8
MS.gene073187.t1 MTR_8g008970 25.966 466 265 19 7 421 5 441 5.07e-20 93.6
MS.gene073187.t1 MTR_8g008970 33.333 180 106 5 244 422 597 763 6.58e-17 84.0
MS.gene073187.t1 MTR_7g070780 23.261 460 297 14 6 419 9 458 5.26e-20 92.8
MS.gene073187.t1 MTR_6g035265 23.567 471 282 19 1 419 4 448 5.35e-20 92.4
MS.gene073187.t1 MTR_7g102450 23.581 458 288 17 8 422 11 449 6.14e-20 92.4
MS.gene073187.t1 MTR_2g059240 24.221 417 264 11 5 383 10 412 8.60e-20 92.0
MS.gene073187.t1 MTR_7g070800 22.319 457 308 13 3 419 1 450 8.87e-20 92.0
MS.gene073187.t1 MTR_3g009490 33.540 161 91 4 268 415 2 159 9.47e-20 87.0
MS.gene073187.t1 MTR_5g090700 30.804 224 132 7 222 424 239 460 9.52e-20 91.7
MS.gene073187.t1 MTR_5g090660 28.185 259 149 8 201 424 200 456 1.21e-19 92.0
MS.gene073187.t1 MTR_1g107315 26.056 426 271 16 8 398 8 424 1.39e-19 91.3
MS.gene073187.t1 MTR_6g033675 28.870 239 152 8 189 414 201 434 1.59e-19 91.3
MS.gene073187.t1 MTR_7g013240 33.140 172 106 6 245 414 252 416 1.71e-19 90.9
MS.gene073187.t1 MTR_8g012745 32.536 209 119 8 223 413 237 441 1.90e-19 90.9
MS.gene073187.t1 MTR_0536s0020 23.736 455 267 17 7 408 17 444 2.13e-19 90.9
MS.gene073187.t1 MTR_0891s0010 26.316 304 182 11 171 445 1 291 2.66e-19 88.2
MS.gene073187.t1 MTR_3g084540 29.730 185 118 4 245 422 272 451 3.06e-19 90.1
MS.gene073187.t1 MTR_5g067170 32.105 190 113 5 244 419 267 454 3.10e-19 90.5
MS.gene073187.t1 MTR_4g117890 25.420 476 257 20 7 422 12 449 4.03e-19 90.1
MS.gene073187.t1 MTR_7g013260 24.700 417 278 16 8 404 6 406 4.56e-19 89.4
MS.gene073187.t1 MTR_3g084520 32.022 178 108 5 245 415 272 443 5.26e-19 89.7
MS.gene073187.t1 MTR_8g044140 24.138 377 242 12 64 402 37 407 6.86e-19 89.0
MS.gene073187.t1 MTR_1g107380 31.304 230 132 10 206 420 230 448 7.40e-19 89.0
MS.gene073187.t1 MTR_5g090630 28.295 258 148 8 202 424 194 449 8.05e-19 89.0
MS.gene073187.t1 MTR_3g069710 31.518 257 161 9 196 443 204 454 8.54e-19 89.0
MS.gene073187.t1 MTR_5g090670 25.284 352 202 11 110 424 133 460 8.68e-19 89.0
MS.gene073187.t1 MTR_5g070040 29.965 287 169 13 152 425 184 451 9.98e-19 88.6
MS.gene073187.t1 MTR_3g084530 32.022 178 108 5 245 415 272 443 1.63e-18 88.2
MS.gene073187.t1 MTR_3g479610 28.641 206 129 6 245 445 122 314 1.65e-18 86.3
MS.gene073187.t1 MTR_6g033660 32.558 172 110 4 245 414 266 433 1.69e-18 88.2
MS.gene073187.t1 MTR_1g107360 32.195 205 127 5 218 421 245 438 1.99e-18 87.8
MS.gene073187.t1 MTR_4g128720 25.000 428 282 16 7 411 14 425 2.00e-18 87.8
MS.gene073187.t1 MTR_5g090620 26.641 259 151 7 203 424 203 459 2.11e-18 87.8
MS.gene073187.t1 MTR_8g088560 31.551 187 120 6 238 424 259 437 2.40e-18 87.4
MS.gene073187.t1 MTR_4g094920 28.713 202 135 6 245 440 281 479 3.61e-18 87.0
MS.gene073187.t1 MTR_4g095008 29.121 182 120 6 245 422 266 442 4.18e-18 87.0
MS.gene073187.t1 MTR_4g118000 24.503 453 280 19 6 418 10 440 1.10e-17 85.5
MS.gene073187.t1 MTR_4g008630 26.378 254 169 7 185 423 191 441 1.37e-17 85.1
MS.gene073187.t1 MTR_7g080935 23.516 438 292 12 7 420 10 428 1.43e-17 85.1
MS.gene073187.t1 MTR_6g013900 32.432 185 111 6 239 421 283 455 1.53e-17 85.1
MS.gene073187.t1 MTR_7g080940 30.769 182 115 5 239 420 258 428 1.82e-17 84.7
MS.gene073187.t1 MTR_5g090580 25.806 279 166 8 201 444 202 474 2.14e-17 84.7
MS.gene073187.t1 MTR_8g059425 28.163 245 140 11 196 421 227 454 2.29e-17 84.7
MS.gene073187.t1 MTR_8g064870 23.932 468 278 17 6 421 9 450 2.53e-17 84.3
MS.gene073187.t1 MTR_4g128690 30.864 243 150 9 196 434 216 444 2.70e-17 84.3
MS.gene073187.t1 MTR_7g071050 24.256 437 273 16 7 419 12 414 3.54e-17 83.6
MS.gene073187.t1 MTR_3g031400 27.155 232 141 6 206 426 215 429 4.26e-17 83.6
MS.gene073187.t1 MTR_5g029800 28.507 221 119 7 244 426 265 484 4.48e-17 83.6
MS.gene073187.t1 MTR_2g035040 30.168 179 110 4 244 408 174 351 4.75e-17 83.2
MS.gene073187.t1 MTR_6g014220 31.694 183 115 5 239 421 282 454 5.05e-17 83.6
MS.gene073187.t1 MTR_7g080950 31.319 182 114 6 239 420 253 423 5.34e-17 83.2
MS.gene073187.t1 MTR_6g013990 29.508 183 119 5 239 421 282 454 5.37e-17 83.6
MS.gene073187.t1 MTR_6g014020 31.694 183 115 5 239 421 284 456 5.71e-17 83.6
MS.gene073187.t1 MTR_3g479490 28.814 177 117 4 245 421 283 450 6.25e-17 83.2
MS.gene073187.t1 MTR_0288s0020 30.303 231 133 8 196 421 230 437 7.11e-17 83.2
MS.gene073187.t1 MTR_6g014170 31.694 183 115 5 239 421 266 438 8.35e-17 82.8
MS.gene073187.t1 MTR_6g014250 24.516 465 282 19 8 422 10 455 8.82e-17 82.8
MS.gene073187.t1 MTR_5g027210 23.887 247 155 3 198 412 212 457 9.96e-17 82.8
MS.gene073187.t1 MTR_8g032950 23.861 461 293 19 6 421 10 457 1.43e-16 82.0
MS.gene073187.t1 MTR_5g058320 23.094 459 287 16 5 421 7 441 1.47e-16 82.0
MS.gene073187.t1 MTR_6g014190 31.892 185 112 6 239 421 91 263 1.52e-16 80.1
MS.gene073187.t1 MTR_7g011470 24.161 447 292 13 8 421 10 442 1.71e-16 82.0
MS.gene073187.t1 MTR_3g031450 25.424 236 144 6 206 426 213 431 1.79e-16 81.6
MS.gene073187.t1 MTR_7g070870 22.637 402 279 12 4 380 15 409 1.91e-16 81.6
MS.gene073187.t1 MTR_7g012120 29.775 178 110 4 245 408 272 448 1.98e-16 81.6
MS.gene073187.t1 MTR_5g016480 27.861 201 139 5 245 442 275 472 2.82e-16 81.3
MS.gene073187.t1 MTR_6g014270 22.629 464 294 15 8 421 7 455 2.98e-16 81.3
MS.gene073187.t1 MTR_7g011470 31.351 185 113 6 239 421 266 438 3.47e-16 80.9
MS.gene073187.t1 MTR_6g011340 27.917 240 147 9 196 421 229 456 3.59e-16 80.9
MS.gene073187.t1 MTR_1g107375 30.964 197 122 6 226 421 247 430 3.60e-16 80.9
MS.gene073187.t1 MTR_5g090600 24.194 372 226 14 92 444 119 453 3.73e-16 80.9
MS.gene073187.t1 MTR_7g470610 32.639 144 93 3 239 380 128 269 5.36e-16 78.6
MS.gene073187.t1 MTR_7g070583 32.639 144 93 3 239 380 128 269 5.36e-16 78.6
MS.gene073187.t1 MTR_3g008010 32.597 181 104 7 245 421 288 454 5.54e-16 80.5
MS.gene073187.t1 MTR_8g090095 26.939 245 161 7 195 424 218 459 6.32e-16 80.1
MS.gene073187.t1 MTR_4g108250 21.814 463 305 14 7 422 10 462 7.94e-16 80.1
MS.gene073187.t1 MTR_5g040030 24.188 277 180 7 196 445 219 492 1.21e-15 79.3
MS.gene073187.t1 MTR_1g032490 34.194 155 95 4 245 396 273 423 1.58e-15 79.0
MS.gene073187.t1 MTR_5g072860 22.078 462 293 16 8 431 18 450 1.97e-15 78.6
MS.gene073187.t1 MTR_1g029540 25.714 245 160 7 195 423 200 438 2.14e-15 78.6
MS.gene073187.t1 MTR_6g014200 29.508 183 119 5 239 421 281 453 2.29e-15 78.6
MS.gene073187.t1 MTR_6g035295 21.730 497 313 17 7 445 11 489 2.97e-15 78.2
MS.gene073187.t1 MTR_8g007585 30.508 177 113 5 245 421 202 368 3.18e-15 77.4
MS.gene073187.t1 MTR_7g070860 21.460 452 296 13 7 419 6 437 3.51e-15 77.8
MS.gene073187.t1 MTR_6g014050 30.811 185 114 6 239 421 285 457 3.78e-15 77.8
MS.gene073187.t1 MTR_6g013920 29.032 186 115 6 239 413 283 462 5.04e-15 77.4
MS.gene073187.t1 MTR_8g056740 25.108 231 159 5 196 416 111 337 5.65e-15 76.6
MS.gene073187.t1 MTR_6g014310 28.216 241 145 9 196 421 230 457 6.65e-15 77.0
MS.gene073187.t1 MTR_1g107285 28.017 232 139 8 205 421 222 440 1.49e-14 75.9
MS.gene073187.t1 MTR_6g014040 30.055 183 118 5 239 421 285 457 1.61e-14 75.9
MS.gene073187.t1 MTR_6g014187 23.395 483 303 19 8 440 10 475 2.02e-14 75.5
MS.gene073187.t1 MTR_6g013450 28.962 183 120 5 239 421 285 457 2.59e-14 75.1
MS.gene073187.t1 MTR_5g004940 36.522 115 71 2 245 358 199 312 3.17e-14 74.3
MS.gene073187.t1 MTR_6g014240 28.571 182 120 5 239 420 251 422 5.00e-14 74.3
MS.gene073187.t1 MTR_6g014150 32.075 159 98 5 239 392 281 434 8.00e-14 73.6
MS.gene073187.t1 MTR_5g072820 23.661 448 282 19 8 425 10 427 1.24e-13 72.8
MS.gene073187.t1 MTR_5g072810 24.336 226 149 5 205 420 216 429 1.79e-13 72.4
MS.gene073187.t1 MTR_6g014290 28.649 185 118 6 239 421 282 454 1.90e-13 72.4
MS.gene073187.t1 MTR_5g464810 28.079 203 129 6 245 445 288 475 2.46e-13 72.0
MS.gene073187.t1 MTR_5g064240 28.079 203 129 6 245 445 288 475 2.46e-13 72.0
MS.gene073187.t1 MTR_0036s0220 27.717 184 122 5 239 422 282 454 4.51e-13 71.2
MS.gene073187.t1 MTR_6g013960 22.052 458 304 13 8 422 10 457 9.46e-13 70.5
MS.gene073187.t1 MTR_2086s0010 27.389 157 105 4 265 421 1 148 1.20e-12 66.6
MS.gene073187.t1 MTR_1996s0010 27.389 157 105 4 265 421 1 148 1.20e-12 66.6
MS.gene073187.t1 MTR_5g072830 23.179 453 270 18 8 420 10 424 1.28e-12 69.7
MS.gene073187.t1 MTR_1g040310 21.171 444 293 14 7 412 14 438 1.36e-12 69.7
MS.gene073187.t1 MTR_7g080900 29.825 171 110 5 245 415 266 426 1.59e-12 69.7
MS.gene073187.t1 MTR_5g072840 21.903 452 287 18 8 426 10 428 3.87e-12 68.2
MS.gene073187.t1 MTR_7g039550 26.316 266 159 10 206 445 5 259 4.03e-12 67.0
MS.gene073187.t1 MTR_4g064987 31.461 178 90 7 244 414 251 403 4.06e-12 68.2
MS.gene073187.t1 MTR_4g064987 25.624 441 256 22 3 414 12 409 4.47e-12 68.2
MS.gene073187.t1 MTR_6g078320 23.267 404 219 13 8 347 11 387 7.72e-12 67.4
MS.gene073187.t1 MTR_6g014300 26.752 157 105 5 265 421 296 442 1.28e-11 66.6
MS.gene073187.t1 MTR_0477s0010 29.730 185 116 6 239 421 121 293 2.20e-11 65.1
MS.gene073187.t1 MTR_8g009840 30.508 177 101 5 260 421 333 502 2.25e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene073187.t1 AT4G27570 44.395 446 236 6 7 444 6 447 6.98e-141 411
MS.gene073187.t1 AT4G27560 44.170 446 237 6 7 444 6 447 1.49e-138 405
MS.gene073187.t1 AT5G53990 43.750 448 233 6 7 445 5 442 4.17e-138 404
MS.gene073187.t1 AT5G54010 43.624 447 241 5 7 445 5 448 7.60e-138 403
MS.gene073187.t1 AT1G64920 43.681 451 233 7 7 445 5 446 1.02e-136 400
MS.gene073187.t1 AT4G09500 42.825 446 242 6 3 442 1 439 4.29e-135 396
MS.gene073187.t1 AT2G22930 42.953 447 244 5 3 444 1 441 1.50e-132 389
MS.gene073187.t1 AT3G29630 42.316 449 241 5 7 445 5 445 4.04e-132 389
MS.gene073187.t1 AT1G64910 42.601 446 239 7 7 444 5 441 4.51e-132 388
MS.gene073187.t1 AT5G54060 43.450 458 236 6 7 444 12 466 5.46e-132 389
MS.gene073187.t1 AT3G29630 41.480 446 223 6 7 445 5 419 3.48e-124 367
MS.gene073187.t1 AT4G09500 40.899 445 227 7 3 442 1 414 1.83e-121 360
MS.gene073187.t1 AT1G50580 40.724 442 248 5 7 441 5 439 4.62e-119 355
MS.gene073187.t1 AT2G22590 34.565 460 268 15 7 440 14 466 2.94e-70 230
MS.gene073187.t1 AT5G49690 32.648 438 256 12 7 420 9 431 2.55e-64 214
MS.gene073187.t1 AT5G65550 30.342 468 288 16 5 444 6 463 1.40e-61 207
MS.gene073187.t1 AT2G22930 38.389 211 122 2 3 209 1 207 1.13e-47 166
MS.gene073187.t1 AT2G22930 34.286 105 64 3 343 444 187 289 1.70e-12 68.2
MS.gene073187.t1 AT5G03490 27.451 459 297 13 6 444 17 459 4.08e-37 141
MS.gene073187.t1 AT5G12890 28.043 460 284 14 4 423 6 458 1.08e-36 140
MS.gene073187.t1 AT1G51210 27.356 435 271 13 8 419 20 432 1.26e-34 134
MS.gene073187.t1 AT2G16890 27.983 461 282 21 8 431 9 456 1.54e-32 129
MS.gene073187.t1 AT1G73880 27.187 423 243 16 4 383 10 410 2.52e-31 125
MS.gene073187.t1 AT4G36770 28.571 462 259 19 7 421 3 440 6.95e-31 124
MS.gene073187.t1 AT2G15480 25.773 485 308 15 2 441 4 481 3.77e-30 122
MS.gene073187.t1 AT4G34131 25.673 483 298 17 7 440 9 479 1.01e-29 121
MS.gene073187.t1 AT2G15480 25.991 454 285 14 2 412 4 449 3.86e-29 119
MS.gene073187.t1 AT1G05675 27.477 444 270 17 8 420 6 428 9.63e-29 118
MS.gene073187.t1 AT2G16890 28.000 425 261 19 8 398 9 422 1.05e-28 117
MS.gene073187.t1 AT2G15490 26.250 480 302 17 7 441 6 478 1.23e-28 118
MS.gene073187.t1 AT2G15490 26.294 483 301 18 7 441 6 481 1.32e-28 118
MS.gene073187.t1 AT4G34138 26.681 461 273 15 7 419 10 453 2.78e-28 117
MS.gene073187.t1 AT2G36750 28.510 463 272 18 5 419 7 458 3.45e-28 117
MS.gene073187.t1 AT4G34135 26.682 446 263 16 7 402 10 441 4.17e-28 116
MS.gene073187.t1 AT1G10400 25.847 472 295 19 7 437 6 463 4.70e-28 116
MS.gene073187.t1 AT2G31750 24.615 455 273 15 8 422 8 432 1.15e-27 115
MS.gene073187.t1 AT2G31750 24.558 452 277 15 8 422 8 432 1.57e-27 115
MS.gene073187.t1 AT2G36800 27.015 459 284 17 6 419 10 462 4.74e-27 113
MS.gene073187.t1 AT5G14860 26.882 465 270 20 8 422 8 452 5.10e-27 113
MS.gene073187.t1 AT1G01420 26.898 461 265 17 8 421 8 443 1.34e-26 112
MS.gene073187.t1 AT1G01420 26.898 461 265 17 8 421 11 446 1.63e-26 112
MS.gene073187.t1 AT2G36780 27.371 464 277 20 5 419 11 463 1.77e-26 112
MS.gene073187.t1 AT2G18570 26.049 453 291 16 1 420 1 442 2.40e-26 111
MS.gene073187.t1 AT2G36770 27.273 462 280 20 5 419 11 463 2.90e-26 111
MS.gene073187.t1 AT2G36760 27.754 472 265 19 5 419 11 463 2.03e-25 108
MS.gene073187.t1 AT1G05680 25.771 454 265 17 8 420 6 428 2.76e-25 108
MS.gene073187.t1 AT4G01070 30.796 289 162 9 147 421 180 444 2.22e-24 105
MS.gene073187.t1 AT2G18560 29.804 255 152 7 187 420 104 352 3.34e-24 103
MS.gene073187.t1 AT2G31790 25.556 450 273 17 8 420 8 432 3.36e-24 105
MS.gene073187.t1 AT3G50740 25.490 459 281 17 8 421 7 449 2.78e-23 102
MS.gene073187.t1 AT2G43820 25.265 471 285 19 8 441 7 447 3.36e-23 102
MS.gene073187.t1 AT5G66690 25.612 449 284 17 8 420 7 441 1.57e-22 100
MS.gene073187.t1 AT3G53150 25.339 442 284 17 7 404 21 460 2.46e-22 99.8
MS.gene073187.t1 AT5G26310 24.944 445 284 16 8 414 7 439 3.63e-22 99.4
MS.gene073187.t1 AT3G46670 27.826 460 272 22 16 445 17 446 4.00e-22 99.0
MS.gene073187.t1 AT2G30140 24.714 437 280 15 8 419 13 425 4.79e-22 98.6
MS.gene073187.t1 AT4G15490 25.056 447 293 16 1 415 1 437 5.25e-22 98.6
MS.gene073187.t1 AT5G59580 26.136 440 279 19 8 423 9 426 9.76e-22 97.8
MS.gene073187.t1 AT3G53160 25.109 458 284 19 6 414 6 453 1.96e-21 97.1
MS.gene073187.t1 AT2G30150 24.204 471 307 18 4 444 6 456 2.30e-21 96.7
MS.gene073187.t1 AT2G30140 25.056 443 272 17 8 419 13 426 2.50e-21 96.3
MS.gene073187.t1 AT2G36970 29.386 228 149 6 201 423 229 449 2.83e-21 96.7
MS.gene073187.t1 AT1G07250 27.925 265 176 8 189 440 210 472 5.11e-21 95.9
MS.gene073187.t1 AT5G59590 29.412 272 170 11 181 445 191 447 8.67e-21 94.7
MS.gene073187.t1 AT5G05880 25.000 452 284 14 1 415 1 434 8.70e-21 94.7
MS.gene073187.t1 AT2G29730 34.239 184 112 5 231 411 255 432 9.92e-21 94.7
MS.gene073187.t1 AT4G15480 33.023 215 126 8 213 415 241 449 1.88e-20 94.0
MS.gene073187.t1 AT1G24100 23.779 471 298 15 8 440 11 458 4.14e-20 92.8
MS.gene073187.t1 AT2G30150 23.965 459 302 17 13 444 2 440 9.60e-20 91.7
MS.gene073187.t1 AT3G21760 30.151 199 119 6 234 414 258 454 1.43e-19 91.3
MS.gene073187.t1 AT4G15280 30.252 238 142 6 227 445 243 475 1.48e-19 91.3
MS.gene073187.t1 AT4G15280 30.252 238 142 6 227 445 275 507 1.51e-19 91.3
MS.gene073187.t1 AT2G43840 23.404 470 295 17 8 441 7 447 1.70e-19 90.9
MS.gene073187.t1 AT2G43840 23.729 472 291 18 8 441 7 447 2.21e-19 90.5
MS.gene073187.t1 AT2G36790 25.870 460 291 18 4 419 9 462 2.25e-19 90.9
MS.gene073187.t1 AT1G22360 25.000 464 280 20 8 422 10 454 4.53e-19 89.7
MS.gene073187.t1 AT4G15260 29.358 218 132 6 245 445 144 356 4.60e-19 88.6
MS.gene073187.t1 AT3G22250 25.974 462 251 22 9 414 9 435 4.65e-19 89.7
MS.gene073187.t1 AT3G11340 26.047 430 269 16 9 414 10 414 9.34e-19 88.6
MS.gene073187.t1 AT1G01390 26.087 483 281 19 8 440 25 481 1.17e-18 88.6
MS.gene073187.t1 AT3G16520 33.333 165 104 3 244 404 262 424 1.35e-18 88.2
MS.gene073187.t1 AT1G01390 26.087 483 281 19 8 440 8 464 1.36e-18 88.6
MS.gene073187.t1 AT3G21790 28.328 293 170 8 170 440 204 478 1.41e-18 88.6
MS.gene073187.t1 AT3G16520 33.333 165 104 3 244 404 262 424 1.43e-18 88.2
MS.gene073187.t1 AT2G23250 24.528 424 279 17 18 420 8 411 1.46e-18 88.2
MS.gene073187.t1 AT3G16520 33.333 165 104 3 244 404 262 424 1.56e-18 88.2
MS.gene073187.t1 AT1G06000 23.750 400 243 14 8 380 10 374 1.82e-18 87.8
MS.gene073187.t1 AT2G29710 33.333 186 112 7 231 411 254 432 3.83e-18 87.0
MS.gene073187.t1 AT3G21800 31.980 197 111 5 245 420 265 459 3.90e-18 87.0
MS.gene073187.t1 AT4G15500 23.831 449 289 17 8 421 9 439 4.11e-18 87.0
MS.gene073187.t1 AT4G15550 22.096 439 301 14 5 410 12 442 6.27e-18 86.3
MS.gene073187.t1 AT3G55700 31.553 206 124 6 232 431 246 440 7.09e-18 86.3
MS.gene073187.t1 AT5G05870 27.490 251 155 7 192 422 204 447 1.00e-17 85.5
MS.gene073187.t1 AT2G23260 23.251 443 289 16 8 421 10 430 1.78e-17 84.7
MS.gene073187.t1 AT5G05890 29.249 253 163 7 168 411 177 422 1.78e-17 84.7
MS.gene073187.t1 AT3G46700 25.751 466 284 21 8 444 9 441 1.80e-17 84.7
MS.gene073187.t1 AT3G21560 32.370 173 107 6 245 415 279 443 1.92e-17 85.1
MS.gene073187.t1 AT1G07240 32.973 185 114 5 245 421 274 456 2.18e-17 84.7
MS.gene073187.t1 AT3G55710 36.429 140 84 4 245 382 263 399 2.20e-17 84.7
MS.gene073187.t1 AT1G07260 28.821 229 151 6 222 440 245 471 3.06e-17 84.3
MS.gene073187.t1 AT1G05530 27.309 249 157 7 208 438 206 448 3.11e-17 84.0
MS.gene073187.t1 AT3G21750 26.141 241 156 5 222 442 232 470 3.25e-17 84.0
MS.gene073187.t1 AT1G05560 28.634 227 141 7 227 438 225 445 3.80e-17 84.0
MS.gene073187.t1 AT1G05560 28.634 227 141 7 227 438 275 495 3.97e-17 84.0
MS.gene073187.t1 AT5G05860 25.000 444 275 18 7 420 8 423 4.41e-17 83.6
MS.gene073187.t1 AT3G46680 24.944 449 286 18 8 431 9 431 5.31e-17 83.2
MS.gene073187.t1 AT5G38010 25.261 479 278 22 8 444 10 450 8.06e-17 82.8
MS.gene073187.t1 AT2G29740 29.353 201 132 5 222 414 250 448 8.66e-17 82.8
MS.gene073187.t1 AT3G21780 31.606 193 110 6 245 421 259 445 1.06e-16 82.4
MS.gene073187.t1 AT1G22360 24.569 464 270 21 8 422 10 442 1.66e-16 82.0
MS.gene073187.t1 AT4G14090 27.815 302 178 14 141 434 176 445 2.19e-16 81.6
MS.gene073187.t1 AT1G78270 23.696 460 291 18 8 422 13 457 9.20e-16 79.7
MS.gene073187.t1 AT2G29750 31.351 185 117 6 227 403 255 437 1.17e-15 79.3
MS.gene073187.t1 AT1G22400 30.337 178 114 5 245 422 291 458 1.20e-14 76.3
MS.gene073187.t1 AT2G28080 24.891 229 150 7 200 410 220 444 2.97e-14 75.1
MS.gene073187.t1 AT1G22380 23.077 468 284 20 8 422 13 457 6.56e-14 73.9
MS.gene073187.t1 AT3G46650 24.419 430 281 16 8 420 10 412 1.59e-13 72.8
MS.gene073187.t1 AT2G26480 24.307 469 291 20 8 445 8 443 3.67e-13 71.6
MS.gene073187.t1 AT5G05900 23.581 458 296 16 1 422 1 440 9.65e-13 70.1
MS.gene073187.t1 AT1G22340 27.363 201 135 5 245 445 290 479 1.02e-12 70.5
MS.gene073187.t1 AT5G17030 26.180 233 152 8 196 422 215 433 1.38e-12 69.7
MS.gene073187.t1 AT3G02100 29.319 191 111 6 245 428 279 452 1.51e-12 69.7
MS.gene073187.t1 AT5G17050 26.816 179 118 5 244 422 269 434 1.62e-12 69.7
MS.gene073187.t1 AT3G46720 27.619 210 128 7 239 445 250 438 2.40e-11 65.9
MS.gene073187.t1 AT5G17040 25.698 179 120 5 244 422 252 417 5.76e-11 64.7
MS.gene073187.t1 AT5G17040 25.698 179 120 5 244 422 150 315 9.04e-11 63.5

Find 85 sgRNAs with CRISPR-Local

Find 105 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATCAAAGAAAACTATTTC+TGG 0.161176 2.3:+14248654 None:intergenic
AAAGGAAAAGGGATTGTTTA+TGG 0.177110 2.3:-14248054 MS.gene073187:CDS
ATCACAGTTCCTCATGTTAA+TGG 0.256113 2.3:-14248792 MS.gene073187:CDS
ATCCTTTCATTGAACCCTTC+TGG 0.281848 2.3:+14248078 None:intergenic
AAAGTCTCCAATACTTGATA+TGG 0.289217 2.3:-14248590 MS.gene073187:CDS
CAGTTTCAAGAGTTGTTACT+TGG 0.341376 2.3:-14248177 MS.gene073187:CDS
GGGTTCAATGAAAGGATAAA+AGG 0.342906 2.3:-14248072 MS.gene073187:CDS
TTACTTGGTCTTGAATTAAC+AGG 0.344148 2.3:-14248162 MS.gene073187:CDS
GGAACAAACGTAATAAGATT+TGG 0.355222 2.3:+14248816 None:intergenic
AAGGGATTGTTTATGGAAGC+TGG 0.359772 2.3:-14248047 MS.gene073187:CDS
GTGGTTTCATAAAATTTCTA+AGG 0.376324 2.3:+14248547 None:intergenic
GCAGCACTTAAGCCACCTAT+TGG 0.380205 2.3:-14248126 MS.gene073187:CDS
GGCTTAAGTGCTGCAAGAAA+TGG 0.387827 2.3:+14248135 None:intergenic
TTGTTAGAGAGACGGAGAAA+TGG 0.391956 2.3:+14248918 None:intergenic
TCAATTGACTCAAATCCAAT+AGG 0.400322 2.3:+14248111 None:intergenic
AAAGGTTGCAGAGAAATTGA+TGG 0.402218 2.3:-14248378 MS.gene073187:CDS
AAAATGGGAATCATGGCTTA+AGG 0.418141 2.3:-14248262 MS.gene073187:CDS
AGAGGACCTGAAAGCAAAAC+AGG 0.423847 2.3:+14248318 None:intergenic
CACGTGGCAAGAACACTAAC+TGG 0.434424 2.3:+14247929 None:intergenic
TCTGTGGTTTATTGTGCATA+TGG 0.439244 2.3:-14248225 MS.gene073187:CDS
AATGAAAGGATAAAAGGAAA+AGG 0.439943 2.3:-14248066 MS.gene073187:CDS
GCTAACAAGTCCCTCAGTTA+TGG 0.440101 2.3:+14247957 None:intergenic
TCAGCAAGGAAACTAGAGTT+TGG 0.440995 2.3:-14248465 MS.gene073187:CDS
ATCCTTCTCTGTTTGATCCA+TGG 0.445386 2.3:+14248704 None:intergenic
AATAAGAGGGAATAAAGAAA+AGG 0.449142 2.3:+14248734 None:intergenic
TTGGATTCCATATCAAGTAT+TGG 0.453859 2.3:+14248583 None:intergenic
GGATATTGAACTTCTTCTAA+AGG 0.455822 2.3:-14248685 MS.gene073187:CDS
AATGTTTCCATGGTTTGCTA+TGG 0.456397 2.3:-14248952 MS.gene073187:CDS
TCCATGGCTGTAGCAATAAG+AGG 0.461979 2.3:+14248720 None:intergenic
ATGAAAGGATAAAAGGAAAA+GGG 0.462020 2.3:-14248065 MS.gene073187:CDS
TTAACATGAGGAACTGTGAT+AGG 0.464385 2.3:+14248795 None:intergenic
TCTAACAAATTAGCTATAAG+AGG 0.465935 2.3:-14248903 MS.gene073187:CDS
ATTCTAGAACACCCTTCTGT+TGG 0.466558 2.3:-14248009 MS.gene073187:CDS
ACGTAATAAGATTTGGATGA+AGG 0.468375 2.3:+14248823 None:intergenic
AAATGGGAATCATGGCTTAA+GGG 0.478566 2.3:-14248261 MS.gene073187:CDS
TTGAGAAAGGGGATGAAGAT+GGG 0.480104 2.3:-14247843 MS.gene073187:CDS
CCCTCTTATTGCTACAGCCA+TGG 0.480560 2.3:-14248721 MS.gene073187:CDS
TTGAAGAAGCTTTGCCAGAA+GGG 0.485770 2.3:-14248092 MS.gene073187:CDS
CTAAGGTAAGCTGTTAACAT+TGG 0.486976 2.3:+14248564 None:intergenic
TGCCAGAAGGGTTCAATGAA+AGG 0.488205 2.3:-14248080 MS.gene073187:CDS
ATTGAGAAAGGGGATGAAGA+TGG 0.489276 2.3:-14247844 MS.gene073187:CDS
TGAAACTTGATGCATGGATC+AGG 0.495689 2.3:+14248513 None:intergenic
TTGGAGTGGAAATTGAGAAA+GGG 0.499946 2.3:-14247855 MS.gene073187:CDS
TCAGATGCAGTTGCTTTCAA+AGG 0.503016 2.3:-14248396 MS.gene073187:CDS
ATAAGAGGGAATAAAGAAAA+GGG 0.503468 2.3:+14248735 None:intergenic
ATGTTTCCATGGTTTGCTAT+GGG 0.504571 2.3:-14248951 MS.gene073187:CDS
TGCACATAGCAATGTTTCCA+TGG 0.504753 2.3:-14248962 MS.gene073187:CDS
TTTGGTGGCTCAGGTAAAAG+AGG 0.512418 2.3:+14248300 None:intergenic
GTTGGAGTGGAAATTGAGAA+AGG 0.520596 2.3:-14247856 MS.gene073187:CDS
AGTTTCATTCACACGAACTT+CGG 0.526758 2.3:-14248497 MS.gene073187:CDS
TGGAGTGGAAATTGAGAAAG+GGG 0.539515 2.3:-14247854 MS.gene073187:CDS
ATGGATGAAAGGAATGAGGT+TGG 0.543415 2.3:-14247778 MS.gene073187:CDS
GTGTACGATCGAGTCGACAT+AGG 0.543485 2.3:-14248429 MS.gene073187:CDS
TAGCTAATTTGTTAGAGAGA+CGG 0.544788 2.3:+14248910 None:intergenic
GGGATTCAAGCATGGTTCTG+TGG 0.547152 2.3:-14248241 MS.gene073187:CDS
TTCGGTTCCTTGCTTCAGCA+AGG 0.549548 2.3:-14248479 MS.gene073187:CDS
CTAGTTTCCTTGCTGAAGCA+AGG 0.549661 2.3:+14248472 None:intergenic
TATTGTGCATATGGAAGTGA+AGG 0.565062 2.3:-14248216 MS.gene073187:CDS
ATTGCTATGTGCAAAGGAGG+AGG 0.567284 2.3:+14248972 None:intergenic
ATTGAAGAAGCTTTGCCAGA+AGG 0.567321 2.3:-14248093 MS.gene073187:CDS
ATGAGGTTGGAAGAGAAGTG+AGG 0.579525 2.3:-14247765 MS.gene073187:CDS
TGAAGATTGTGATGGATGAA+AGG 0.583116 2.3:-14247789 MS.gene073187:CDS
GTTATGAAACATCCAACAGA+AGG 0.588945 2.3:+14247997 None:intergenic
AACATTGCTATGTGCAAAGG+AGG 0.593375 2.3:+14248969 None:intergenic
TAGTTTCAGCATCATGAGGA+AGG 0.594193 2.3:+14248769 None:intergenic
ACAGAAACTATCAACACAAG+AGG 0.595546 2.3:+14247693 None:intergenic
ATTGACTCAAATCCAATAGG+TGG 0.595901 2.3:+14248114 None:intergenic
CATGGATCAGGCAACCCTGA+AGG 0.598509 2.3:+14248525 None:intergenic
GGATGTTTCATAACACATTG+TGG 0.601065 2.3:-14247988 MS.gene073187:CDS
GGAAACATTGCTATGTGCAA+AGG 0.601320 2.3:+14248966 None:intergenic
TGGCTTAAGGGATTCAAGCA+TGG 0.607527 2.3:-14248249 MS.gene073187:CDS
TGTGATGGATGAAAGGAATG+AGG 0.626152 2.3:-14247782 MS.gene073187:CDS
AGCCATGGATCAAACAGAGA+AGG 0.627128 2.3:-14248706 MS.gene073187:CDS
AGGAAACTAGAGTTTGGCAG+TGG 0.630184 2.3:-14248459 MS.gene073187:CDS
TGTGAATGAAACTTGATGCA+TGG 0.631614 2.3:+14248507 None:intergenic
CCATGGCTGTAGCAATAAGA+GGG 0.634014 2.3:+14248721 None:intergenic
TGGAGCTGCTTCCATAACTG+AGG 0.634939 2.3:-14247968 MS.gene073187:CDS
GGATCAGGCAACCCTGAAGG+TGG 0.641702 2.3:+14248528 None:intergenic
GGAGCTGCTTCCATAACTGA+GGG 0.647559 2.3:-14247967 MS.gene073187:CDS
CAAAGCTGTGAAGATTGTGA+TGG 0.655994 2.3:-14247797 MS.gene073187:CDS
AAGTGTCCCATAGCAAACCA+TGG 0.661811 2.3:+14248945 None:intergenic
GAAGTAGTTTCAGCATCATG+AGG 0.663497 2.3:+14248765 None:intergenic
TGAGGAAGGCCATTAACATG+AGG 0.680750 2.3:+14248783 None:intergenic
TTATGAAACATCCAACAGAA+GGG 0.698749 2.3:+14247998 None:intergenic
ATATGATCAGAACTTACACG+TGG 0.771040 2.3:+14247913 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTCTTTGATTTTCAATAT+TGG - chr2.3:14248003-14248022 MS.gene073187:CDS 15.0%
!! AAACTACTTTAGATGAAAAA+TGG - chr2.3:14248369-14248388 MS.gene073187:CDS 20.0%
!! AAATCAAAGAAAACTATTTC+TGG + chr2.3:14247996-14248015 None:intergenic 20.0%
!! AACTACTTTAGATGAAAAAT+GGG - chr2.3:14248370-14248389 MS.gene073187:CDS 20.0%
!! GGAAAAATCATAATGAATTA+AGG - chr2.3:14248903-14248922 MS.gene073187:CDS 20.0%
!!! GATTATCTTGAAAATCTTTT+TGG - chr2.3:14248302-14248321 MS.gene073187:CDS 20.0%
!!! TGAAACTGATTTTTTTCTAA+TGG + chr2.3:14248458-14248477 None:intergenic 20.0%
!!! TTTTCATCTAAAGTAGTTTT+TGG + chr2.3:14248368-14248387 None:intergenic 20.0%
! AATAAGAGGGAATAAAGAAA+AGG + chr2.3:14247916-14247935 None:intergenic 25.0%
! AATGAAAGGATAAAAGGAAA+AGG - chr2.3:14248581-14248600 MS.gene073187:CDS 25.0%
! ATAAGAGGGAATAAAGAAAA+GGG + chr2.3:14247915-14247934 None:intergenic 25.0%
! ATGAAAGGATAAAAGGAAAA+GGG - chr2.3:14248582-14248601 MS.gene073187:CDS 25.0%
! GTGGTTTCATAAAATTTCTA+AGG + chr2.3:14248103-14248122 None:intergenic 25.0%
! TCTAACAAATTAGCTATAAG+AGG - chr2.3:14247744-14247763 MS.gene073187:CDS 25.0%
!! ATGAGCAAAAAGTTTAAAGT+TGG - chr2.3:14248773-14248792 MS.gene073187:CDS 25.0%
AAAGGAAAAGGGATTGTTTA+TGG - chr2.3:14248593-14248612 MS.gene073187:CDS 30.0%
AAAGTCTCCAATACTTGATA+TGG - chr2.3:14248057-14248076 MS.gene073187:CDS 30.0%
ACGTAATAAGATTTGGATGA+AGG + chr2.3:14247827-14247846 None:intergenic 30.0%
GGAACAAACGTAATAAGATT+TGG + chr2.3:14247834-14247853 None:intergenic 30.0%
GGATATTGAACTTCTTCTAA+AGG - chr2.3:14247962-14247981 MS.gene073187:CDS 30.0%
TAGATGAAAAATGGGAATCA+TGG - chr2.3:14248378-14248397 MS.gene073187:CDS 30.0%
TTATGAAACATCCAACAGAA+GGG + chr2.3:14248652-14248671 None:intergenic 30.0%
TTGGATTCCATATCAAGTAT+TGG + chr2.3:14248067-14248086 None:intergenic 30.0%
! AATTTTATGAAACCACCTTC+AGG - chr2.3:14248107-14248126 MS.gene073187:CDS 30.0%
! ATTTTATGAAACCACCTTCA+GGG - chr2.3:14248108-14248127 MS.gene073187:CDS 30.0%
! CAAAAAGTTTAAAGTTGGAG+TGG - chr2.3:14248778-14248797 MS.gene073187:CDS 30.0%
! TCAATTGACTCAAATCCAAT+AGG + chr2.3:14248539-14248558 None:intergenic 30.0%
!! ACTTGTTGAGTGTGTTTTTA+GGG + chr2.3:14247791-14247810 None:intergenic 30.0%
!! TAGCTAATTTGTTAGAGAGA+CGG + chr2.3:14247740-14247759 None:intergenic 30.0%
!! TCATCTAAAGTAGTTTTTGG+TGG + chr2.3:14248365-14248384 None:intergenic 30.0%
!! TTACTTGGTCTTGAATTAAC+AGG - chr2.3:14248485-14248504 MS.gene073187:CDS 30.0%
!!! AACTTGTTGAGTGTGTTTTT+AGG + chr2.3:14247792-14247811 None:intergenic 30.0%
AAAATGGGAATCATGGCTTA+AGG - chr2.3:14248385-14248404 MS.gene073187:CDS 35.0%
AAAGGTTGCAGAGAAATTGA+TGG - chr2.3:14248269-14248288 MS.gene073187:CDS 35.0%
AAATGGGAATCATGGCTTAA+GGG - chr2.3:14248386-14248405 MS.gene073187:CDS 35.0%
ACAGAAACTATCAACACAAG+AGG + chr2.3:14248957-14248976 None:intergenic 35.0%
AGTTTCATTCACACGAACTT+CGG - chr2.3:14248150-14248169 MS.gene073187:CDS 35.0%
ATATGATCAGAACTTACACG+TGG + chr2.3:14248737-14248756 None:intergenic 35.0%
ATCACAGTTCCTCATGTTAA+TGG - chr2.3:14247855-14247874 MS.gene073187:CDS 35.0%
CAGTTTCAAGAGTTGTTACT+TGG - chr2.3:14248470-14248489 MS.gene073187:CDS 35.0%
CTAAGGTAAGCTGTTAACAT+TGG + chr2.3:14248086-14248105 None:intergenic 35.0%
GGATGTTTCATAACACATTG+TGG - chr2.3:14248659-14248678 MS.gene073187:CDS 35.0%
GGGTTCAATGAAAGGATAAA+AGG - chr2.3:14248575-14248594 MS.gene073187:CDS 35.0%
GTTATGAAACATCCAACAGA+AGG + chr2.3:14248653-14248672 None:intergenic 35.0%
TATTGTGCATATGGAAGTGA+AGG - chr2.3:14248431-14248450 MS.gene073187:CDS 35.0%
TCTGTGGTTTATTGTGCATA+TGG - chr2.3:14248422-14248441 MS.gene073187:CDS 35.0%
TGTGAATGAAACTTGATGCA+TGG + chr2.3:14248143-14248162 None:intergenic 35.0%
TTAACATGAGGAACTGTGAT+AGG + chr2.3:14247855-14247874 None:intergenic 35.0%
TTGGAGTGGAAATTGAGAAA+GGG - chr2.3:14248792-14248811 MS.gene073187:CDS 35.0%
! ATTGACTCAAATCCAATAGG+TGG + chr2.3:14248536-14248555 None:intergenic 35.0%
!! AATGTTTCCATGGTTTGCTA+TGG - chr2.3:14247695-14247714 MS.gene073187:CDS 35.0%
!! ATGTTTCCATGGTTTGCTAT+GGG - chr2.3:14247696-14247715 MS.gene073187:CDS 35.0%
!! TGAAGATTGTGATGGATGAA+AGG - chr2.3:14248858-14248877 MS.gene073187:CDS 35.0%
AACATTGCTATGTGCAAAGG+AGG + chr2.3:14247681-14247700 None:intergenic 40.0%
AAGGGATTGTTTATGGAAGC+TGG - chr2.3:14248600-14248619 MS.gene073187:CDS 40.0%
ATCCTTCTCTGTTTGATCCA+TGG + chr2.3:14247946-14247965 None:intergenic 40.0%
ATCCTTTCATTGAACCCTTC+TGG + chr2.3:14248572-14248591 None:intergenic 40.0%
ATGGATGAAAGGAATGAGGT+TGG - chr2.3:14248869-14248888 MS.gene073187:CDS 40.0%
ATTGAAGAAGCTTTGCCAGA+AGG - chr2.3:14248554-14248573 MS.gene073187:CDS 40.0%
ATTGAGAAAGGGGATGAAGA+TGG - chr2.3:14248803-14248822 MS.gene073187:CDS 40.0%
CAAAGCTGTGAAGATTGTGA+TGG - chr2.3:14248850-14248869 MS.gene073187:CDS 40.0%
CCAAACCTGACTCAAAAACT+TGG - chr2.3:14248029-14248048 MS.gene073187:CDS 40.0%
GAAGTAGTTTCAGCATCATG+AGG + chr2.3:14247885-14247904 None:intergenic 40.0%
GGAAACATTGCTATGTGCAA+AGG + chr2.3:14247684-14247703 None:intergenic 40.0%
GTTGGAGTGGAAATTGAGAA+AGG - chr2.3:14248791-14248810 MS.gene073187:CDS 40.0%
TAGTTTCAGCATCATGAGGA+AGG + chr2.3:14247881-14247900 None:intergenic 40.0%
TCAGCAAGGAAACTAGAGTT+TGG - chr2.3:14248182-14248201 MS.gene073187:CDS 40.0%
TGAAACTTGATGCATGGATC+AGG + chr2.3:14248137-14248156 None:intergenic 40.0%
TGCACATAGCAATGTTTCCA+TGG - chr2.3:14247685-14247704 MS.gene073187:CDS 40.0%
TGGAGTGGAAATTGAGAAAG+GGG - chr2.3:14248793-14248812 MS.gene073187:CDS 40.0%
TTGAAGAAGCTTTGCCAGAA+GGG - chr2.3:14248555-14248574 MS.gene073187:CDS 40.0%
TTGAGAAAGGGGATGAAGAT+GGG - chr2.3:14248804-14248823 MS.gene073187:CDS 40.0%
TTGTTAGAGAGACGGAGAAA+TGG + chr2.3:14247732-14247751 None:intergenic 40.0%
! GGAAAACCTGTTTTGCTTTC+AGG - chr2.3:14248323-14248342 MS.gene073187:CDS 40.0%
! TCAGATGCAGTTGCTTTCAA+AGG - chr2.3:14248251-14248270 MS.gene073187:CDS 40.0%
!! ATTCTAGAACACCCTTCTGT+TGG - chr2.3:14248638-14248657 MS.gene073187:CDS 40.0%
!! TGTGATGGATGAAAGGAATG+AGG - chr2.3:14248865-14248884 MS.gene073187:CDS 40.0%
!!! AAAGTAGTTTTTGGTGGCTC+AGG + chr2.3:14248359-14248378 None:intergenic 40.0%
!!! CCAAGTTTTTGAGTCAGGTT+TGG + chr2.3:14248032-14248051 None:intergenic 40.0%
!!! TGATGCCAAGTTTTTGAGTC+AGG + chr2.3:14248037-14248056 None:intergenic 40.0%
AAGTGTCCCATAGCAAACCA+TGG + chr2.3:14247705-14247724 None:intergenic 45.0%
AGAGGACCTGAAAGCAAAAC+AGG + chr2.3:14248332-14248351 None:intergenic 45.0%
AGCCATGGATCAAACAGAGA+AGG - chr2.3:14247941-14247960 MS.gene073187:CDS 45.0%
AGGAAACTAGAGTTTGGCAG+TGG - chr2.3:14248188-14248207 MS.gene073187:CDS 45.0%
ATGAGGTTGGAAGAGAAGTG+AGG - chr2.3:14248882-14248901 MS.gene073187:CDS 45.0%
ATTGCTATGTGCAAAGGAGG+AGG + chr2.3:14247678-14247697 None:intergenic 45.0%
CCATGGCTGTAGCAATAAGA+GGG + chr2.3:14247929-14247948 None:intergenic 45.0%
CTAGTTTCCTTGCTGAAGCA+AGG + chr2.3:14248178-14248197 None:intergenic 45.0%
GCTAACAAGTCCCTCAGTTA+TGG + chr2.3:14248693-14248712 None:intergenic 45.0%
TCCATGGCTGTAGCAATAAG+AGG + chr2.3:14247930-14247949 None:intergenic 45.0%
TGAGGAAGGCCATTAACATG+AGG + chr2.3:14247867-14247886 None:intergenic 45.0%
TGCCAGAAGGGTTCAATGAA+AGG - chr2.3:14248567-14248586 MS.gene073187:CDS 45.0%
TGGCTTAAGGGATTCAAGCA+TGG - chr2.3:14248398-14248417 MS.gene073187:CDS 45.0%
! GGCTTAAGTGCTGCAAGAAA+TGG + chr2.3:14248515-14248534 None:intergenic 45.0%
! TTTGGTGGCTCAGGTAAAAG+AGG + chr2.3:14248350-14248369 None:intergenic 45.0%
CACGTGGCAAGAACACTAAC+TGG + chr2.3:14248721-14248740 None:intergenic 50.0%
CCCTCTTATTGCTACAGCCA+TGG - chr2.3:14247926-14247945 MS.gene073187:CDS 50.0%
GCAGCACTTAAGCCACCTAT+TGG - chr2.3:14248521-14248540 MS.gene073187:CDS 50.0%
GGAGCTGCTTCCATAACTGA+GGG - chr2.3:14248680-14248699 MS.gene073187:CDS 50.0%
GTGTACGATCGAGTCGACAT+AGG - chr2.3:14248218-14248237 MS.gene073187:CDS 50.0%
TGGAGCTGCTTCCATAACTG+AGG - chr2.3:14248679-14248698 MS.gene073187:CDS 50.0%
TTCGGTTCCTTGCTTCAGCA+AGG - chr2.3:14248168-14248187 MS.gene073187:CDS 50.0%
! GGGATTCAAGCATGGTTCTG+TGG - chr2.3:14248406-14248425 MS.gene073187:CDS 50.0%
CATGGATCAGGCAACCCTGA+AGG + chr2.3:14248125-14248144 None:intergenic 55.0%
GGATCAGGCAACCCTGAAGG+TGG + chr2.3:14248122-14248141 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 14247666 14249003 14247666 ID=MS.gene073187
chr2.3 mRNA 14247666 14249003 14247666 ID=MS.gene073187.t1;Parent=MS.gene073187
chr2.3 exon 14247666 14249003 14247666 ID=MS.gene073187.t1.exon1;Parent=MS.gene073187.t1
chr2.3 CDS 14247666 14249003 14247666 ID=cds.MS.gene073187.t1;Parent=MS.gene073187.t1
Gene Sequence

>MS.gene073187

ATGGATCTTCCTCCTCCTTTGCACATAGCAATGTTTCCATGGTTTGCTATGGGACACTTAACTCCATTTCTCCGTCTCTCTAACAAATTAGCTATAAGAGGTCACAAAATATCATTCTTCATCCCTAAAAACACACTCAACAAGTTACAACATCTCAACCTTCATCCAAATCTTATTACGTTTGTTCCTATCACAGTTCCTCATGTTAATGGCCTTCCTCATGATGCTGAAACTACTTCAGATGTGCCCTTTTCTTTATTCCCTCTTATTGCTACAGCCATGGATCAAACAGAGAAGGATATTGAACTTCTTCTAAAGGAACTAAAGCCAGAAATAGTTTTCTTTGATTTTCAATATTGGCTTCCAAACCTGACTCAAAAACTTGGCATCAAAAGTCTCCAATACTTGATATGGAATCCAATGTTAACAGCTTACCTTAGAAATTTTATGAAACCACCTTCAGGGTTGCCTGATCCATGCATCAAGTTTCATTCACACGAACTTCGGTTCCTTGCTTCAGCAAGGAAACTAGAGTTTGGCAGTGGTATTTTAGTGTACGATCGAGTCGACATAGGCACAAATTTTTCAGATGCAGTTGCTTTCAAAGGTTGCAGAGAAATTGATGGACTATATGCTGATTATCTTGAAAATCTTTTTGGAAAACCTGTTTTGCTTTCAGGTCCTCTTTTACCTGAGCCACCAAAAACTACTTTAGATGAAAAATGGGAATCATGGCTTAAGGGATTCAAGCATGGTTCTGTGGTTTATTGTGCATATGGAAGTGAAGGTCCATTAGAAAAAAATCAGTTTCAAGAGTTGTTACTTGGTCTTGAATTAACAGGTTTTCCATTTCTTGCAGCACTTAAGCCACCTATTGGATTTGAGTCAATTGAAGAAGCTTTGCCAGAAGGGTTCAATGAAAGGATAAAAGGAAAAGGGATTGTTTATGGAAGCTGGATTCAACAACAATTGATTCTAGAACACCCTTCTGTTGGATGTTTCATAACACATTGTGGAGCTGCTTCCATAACTGAGGGACTTGTTAGCACGTGCCAGTTAGTGTTCTTGCCACGTGTAAGTTCTGATCATATCATTAATGCAAGAATGATGAGCAAAAAGTTTAAAGTTGGAGTGGAAATTGAGAAAGGGGATGAAGATGGGTTGTTTACAAATGAAAATGTGTGCAAAGCTGTGAAGATTGTGATGGATGAAAGGAATGAGGTTGGAAGAGAAGTGAGGAAAAATCATAATGAATTAAGGAAGTTTTTATTGTGTGAGAATTTAGAGTCCTCTTGTGTTGATAGTTTCTGTGAAAAGCTTCAAGATTTGATTCATTGA

Protein sequence

>MS.gene073187.t1

MDLPPPLHIAMFPWFAMGHLTPFLRLSNKLAIRGHKISFFIPKNTLNKLQHLNLHPNLITFVPITVPHVNGLPHDAETTSDVPFSLFPLIATAMDQTEKDIELLLKELKPEIVFFDFQYWLPNLTQKLGIKSLQYLIWNPMLTAYLRNFMKPPSGLPDPCIKFHSHELRFLASARKLEFGSGILVYDRVDIGTNFSDAVAFKGCREIDGLYADYLENLFGKPVLLSGPLLPEPPKTTLDEKWESWLKGFKHGSVVYCAYGSEGPLEKNQFQELLLGLELTGFPFLAALKPPIGFESIEEALPEGFNERIKGKGIVYGSWIQQQLILEHPSVGCFITHCGAASITEGLVSTCQLVFLPRVSSDHIINARMMSKKFKVGVEIEKGDEDGLFTNENVCKAVKIVMDERNEVGREVRKNHNELRKFLLCENLESSCVDSFCEKLQDLIH