AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene92078


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene92078.t1 MTR_2g083420 74.891 458 59 2 1 426 1 434 0.0 691
MS.gene92078.t1 MTR_2g083480 74.672 458 84 1 1 426 1 458 0.0 690
MS.gene92078.t1 MTR_2g083390 74.236 458 62 2 1 426 1 434 0.0 681
MS.gene92078.t1 MTR_2g083430 72.707 458 93 1 1 426 1 458 0.0 648
MS.gene92078.t1 MTR_2g083380 61.135 458 146 1 1 426 18 475 0.0 551
MS.gene92078.t1 MTR_2g083490 60.917 458 147 1 1 426 1 458 0.0 550
MS.gene92078.t1 MTR_4g079250 57.609 460 159 4 1 426 1 458 0.0 528
MS.gene92078.t1 MTR_4g079270 56.739 460 163 4 1 426 1 458 0.0 525
MS.gene92078.t1 MTR_2g083360 62.472 453 33 5 6 426 27 374 0.0 515
MS.gene92078.t1 MTR_2g014900 51.549 452 186 2 7 426 6 456 4.31e-160 459
MS.gene92078.t1 MTR_1g090270 38.631 453 242 8 7 425 14 464 1.34e-102 313
MS.gene92078.t1 MTR_2g086283 43.304 448 108 8 11 425 1 335 2.57e-101 305
MS.gene92078.t1 MTR_4g059370 39.815 324 182 6 109 425 74 391 2.42e-77 245
MS.gene92078.t1 MTR_4g079280 52.041 196 81 2 11 206 1 183 2.81e-65 207
MS.gene92078.t1 MTR_8g068330 29.487 468 276 13 1 422 1 460 7.19e-55 189
MS.gene92078.t1 MTR_2g008226 30.786 471 260 17 6 422 8 466 8.46e-54 186
MS.gene92078.t1 MTR_4g123553 29.437 462 264 14 6 422 13 457 9.00e-54 186
MS.gene92078.t1 MTR_7g067330 29.828 466 239 15 2 422 3 425 1.84e-53 184
MS.gene92078.t1 MTR_2g008220 29.638 469 269 15 2 423 8 462 3.76e-53 184
MS.gene92078.t1 MTR_2g008225 29.399 466 274 13 2 423 9 463 1.24e-52 183
MS.gene92078.t1 MTR_8g068360 28.480 467 287 10 2 426 6 467 4.30e-52 181
MS.gene92078.t1 MTR_8g068340 29.167 480 260 14 2 422 6 464 4.48e-52 181
MS.gene92078.t1 MTR_7g067120 29.437 462 240 15 2 419 3 422 6.35e-50 175
MS.gene92078.t1 MTR_6g042310 29.718 461 262 16 7 422 17 460 2.71e-49 174
MS.gene92078.t1 MTR_2g083440 77.451 102 23 0 325 426 11 112 3.49e-49 163
MS.gene92078.t1 MTR_6g036650 28.602 472 272 16 1 422 11 467 1.09e-48 172
MS.gene92078.t1 MTR_2g046620 27.983 461 272 15 6 422 14 458 1.84e-44 161
MS.gene92078.t1 MTR_1g090280 42.623 183 100 3 247 425 133 314 9.87e-44 155
MS.gene92078.t1 MTR_4g077960 28.537 417 262 16 20 422 40 434 1.07e-40 150
MS.gene92078.t1 MTR_8g007650 29.157 439 253 13 7 396 6 435 5.04e-40 149
MS.gene92078.t1 MTR_8g007565 28.929 439 254 13 7 396 6 435 5.75e-40 149
MS.gene92078.t1 MTR_2g014930 34.256 289 78 6 17 273 9 217 1.82e-36 134
MS.gene92078.t1 MTR_5g066410 27.523 436 239 11 11 395 1 410 3.32e-36 138
MS.gene92078.t1 MTR_8g071070 25.840 476 284 15 8 425 7 471 2.74e-32 128
MS.gene92078.t1 MTR_5g087620 26.132 486 256 18 8 411 10 474 6.90e-32 127
MS.gene92078.t1 MTR_4g031800 25.620 484 279 15 6 426 7 472 6.63e-29 118
MS.gene92078.t1 MTR_6g023665 34.973 183 106 3 225 395 263 444 1.41e-28 117
MS.gene92078.t1 MTR_6g488280 35.519 183 105 3 225 395 256 437 2.02e-28 117
MS.gene92078.t1 MTR_0428s0010 35.519 183 105 3 225 395 256 437 2.02e-28 117
MS.gene92078.t1 MTR_8g066610 25.474 475 276 18 1 411 1 461 3.44e-28 116
MS.gene92078.t1 MTR_0009s0240 28.713 404 234 15 8 365 7 402 4.09e-28 115
MS.gene92078.t1 MTR_3g435310 36.364 198 116 6 224 418 222 412 6.24e-28 115
MS.gene92078.t1 MTR_8g009055 26.797 459 252 15 7 402 5 442 1.00e-27 115
MS.gene92078.t1 MTR_3g009510 34.101 217 124 4 204 404 241 454 2.03e-27 114
MS.gene92078.t1 MTR_8g009050 32.063 315 158 12 108 402 164 442 3.13e-27 113
MS.gene92078.t1 MTR_8g012635 32.056 287 158 9 134 403 182 448 5.18e-27 112
MS.gene92078.t1 MTR_8g027885 27.195 467 274 20 5 420 16 467 7.09e-27 112
MS.gene92078.t1 MTR_0184s0030 35.437 206 114 6 205 393 234 437 1.77e-26 111
MS.gene92078.t1 MTR_8g009073 26.872 454 256 18 7 402 5 440 2.47e-26 110
MS.gene92078.t1 MTR_2g098430 23.894 452 283 14 9 405 7 452 2.57e-26 111
MS.gene92078.t1 MTR_0078s0060 25.647 464 261 17 7 408 5 446 6.28e-26 109
MS.gene92078.t1 MTR_8g027870 26.509 464 281 18 5 420 16 467 8.82e-26 109
MS.gene92078.t1 MTR_4g485620 25.862 406 261 13 31 411 48 438 2.16e-25 108
MS.gene92078.t1 MTR_1g019520 35.450 189 107 4 225 402 4 188 2.47e-25 103
MS.gene92078.t1 MTR_8g012650 33.028 218 125 5 203 403 235 448 2.57e-25 108
MS.gene92078.t1 MTR_7g117170 34.286 210 122 5 225 422 266 471 2.68e-25 108
MS.gene92078.t1 MTR_4g485590 27.451 408 208 14 8 362 9 381 2.89e-25 107
MS.gene92078.t1 MTR_8g006730 35.519 183 105 4 225 395 258 439 3.03e-25 107
MS.gene92078.t1 MTR_7g046490 35.938 192 109 4 221 400 250 439 4.42e-25 107
MS.gene92078.t1 MTR_6g033615 30.435 230 138 6 184 395 194 419 4.50e-25 107
MS.gene92078.t1 MTR_8g006710 33.333 183 109 3 225 395 257 438 5.75e-25 107
MS.gene92078.t1 MTR_6g033625 31.602 231 137 7 182 395 207 433 5.76e-25 107
MS.gene92078.t1 MTR_8g006270 28.261 276 168 7 135 396 178 437 6.51e-25 107
MS.gene92078.t1 MTR_6g005600 35.233 193 108 4 223 402 255 443 8.27e-25 106
MS.gene92078.t1 MTR_8g009073 33.953 215 124 6 202 402 101 311 9.32e-25 104
MS.gene92078.t1 MTR_8g012730 31.349 252 149 6 166 403 44 285 1.19e-24 103
MS.gene92078.t1 MTR_7g013220 33.702 181 113 5 225 405 261 434 1.26e-24 105
MS.gene92078.t1 MTR_0184s0040 32.990 194 116 5 221 404 269 458 1.56e-24 105
MS.gene92078.t1 MTR_0078s0190 32.990 194 116 5 221 404 269 458 1.56e-24 105
MS.gene92078.t1 MTR_8g466240 27.033 418 234 19 1 366 1 399 1.66e-24 105
MS.gene92078.t1 MTR_8g465670 25.870 460 254 16 9 402 8 446 1.74e-24 105
MS.gene92078.t1 MTR_4g485630 24.536 485 281 19 7 425 8 473 3.33e-24 104
MS.gene92078.t1 MTR_8g009067 34.574 188 109 4 225 402 139 322 3.79e-24 103
MS.gene92078.t1 MTR_1g062380 24.512 461 267 15 7 396 15 465 5.78e-24 104
MS.gene92078.t1 MTR_8g012630 34.197 193 109 5 225 403 204 392 6.06e-24 103
MS.gene92078.t1 MTR_8g009067 34.574 188 109 4 225 402 257 440 6.12e-24 103
MS.gene92078.t1 MTR_7g102460 25.383 457 255 17 5 389 6 448 1.02e-23 103
MS.gene92078.t1 MTR_7g013200 34.254 181 112 5 225 405 250 423 1.09e-23 102
MS.gene92078.t1 MTR_0078s0010 35.417 192 110 5 221 402 254 441 1.24e-23 103
MS.gene92078.t1 MTR_7g013180 39.881 168 92 6 221 387 254 413 1.31e-23 102
MS.gene92078.t1 MTR_2g046820 32.759 232 138 7 204 422 236 462 1.41e-23 102
MS.gene92078.t1 MTR_6g038240 32.308 195 121 6 222 416 261 444 2.09e-23 102
MS.gene92078.t1 MTR_8g012745 30.921 304 165 13 115 403 172 445 2.60e-23 102
MS.gene92078.t1 MTR_7g070660 25.121 414 270 14 39 425 79 479 2.99e-23 102
MS.gene92078.t1 MTR_8g008990 36.458 192 104 6 225 402 257 444 3.01e-23 102
MS.gene92078.t1 MTR_8g077590 29.710 276 168 6 134 400 184 442 3.20e-23 102
MS.gene92078.t1 MTR_2g040530 29.851 268 150 9 187 422 203 464 4.90e-23 101
MS.gene92078.t1 MTR_1g019510 34.392 189 109 4 225 402 255 439 7.82e-23 100
MS.gene92078.t1 MTR_2g046750 34.052 232 135 8 204 422 239 465 8.75e-23 100
MS.gene92078.t1 MTR_7g070740 25.768 423 261 14 39 426 79 483 9.66e-23 100
MS.gene92078.t1 MTR_5g019580 33.796 216 124 6 204 401 265 479 1.20e-22 100
MS.gene92078.t1 MTR_5g019580 32.636 239 141 7 204 424 241 477 1.25e-22 100
MS.gene92078.t1 MTR_6g033725 30.802 237 142 7 184 402 205 437 1.83e-22 99.8
MS.gene92078.t1 MTR_8g006220 25.641 468 253 17 9 402 7 453 2.05e-22 99.8
MS.gene92078.t1 MTR_8g009063 26.267 434 258 14 7 387 12 436 3.14e-22 99.0
MS.gene92078.t1 MTR_5g035580 24.301 465 284 16 7 426 12 453 3.17e-22 99.0
MS.gene92078.t1 MTR_7g102550 25.604 414 265 15 39 420 77 479 3.46e-22 99.0
MS.gene92078.t1 MTR_7g117405 35.025 197 115 5 221 408 270 462 3.53e-22 99.0
MS.gene92078.t1 MTR_3g069690 29.832 238 149 7 175 402 196 425 4.07e-22 98.6
MS.gene92078.t1 MTR_7g047030 34.375 192 112 5 221 402 254 441 5.00e-22 98.2
MS.gene92078.t1 MTR_7g047270 34.375 192 112 5 221 402 254 441 5.00e-22 98.2
MS.gene92078.t1 MTR_6g038200 24.612 451 257 21 8 404 11 432 5.10e-22 98.2
MS.gene92078.t1 MTR_6g038220 24.222 450 259 20 8 404 11 431 5.61e-22 98.2
MS.gene92078.t1 MTR_7g070610 25.298 419 269 13 39 426 81 486 7.03e-22 98.2
MS.gene92078.t1 MTR_8g044140 25.424 413 257 15 6 384 12 407 8.58e-22 97.4
MS.gene92078.t1 MTR_7g055710 24.752 404 253 14 39 408 79 465 1.08e-21 97.4
MS.gene92078.t1 MTR_8g006260 31.795 195 113 7 227 403 263 455 1.29e-21 97.1
MS.gene92078.t1 MTR_5g090610 27.237 257 161 6 174 406 190 444 1.62e-21 96.7
MS.gene92078.t1 MTR_7g013240 34.146 164 101 5 225 388 250 406 2.25e-21 96.3
MS.gene92078.t1 MTR_5g035560 23.992 471 278 18 7 424 10 453 2.56e-21 96.3
MS.gene92078.t1 MTR_3g009490 35.119 168 93 4 250 404 2 166 2.79e-21 91.3
MS.gene92078.t1 MTR_7g070810 27.027 370 244 10 39 389 77 439 3.02e-21 96.3
MS.gene92078.t1 MTR_5g098960 34.634 205 108 8 225 417 260 450 5.50e-21 95.1
MS.gene92078.t1 MTR_5g045970 28.279 244 149 7 180 400 225 465 6.11e-21 95.1
MS.gene92078.t1 MTR_7g070910 23.203 487 303 15 3 426 6 484 6.41e-21 95.1
MS.gene92078.t1 MTR_4g128720 33.906 233 138 8 178 408 219 437 6.82e-21 94.7
MS.gene92078.t1 MTR_7g013260 32.086 187 114 7 225 411 251 424 7.41e-21 94.7
MS.gene92078.t1 MTR_4g128690 33.047 233 140 8 178 408 216 434 9.71e-21 94.4
MS.gene92078.t1 MTR_4g024020 24.130 460 260 17 5 389 6 451 9.79e-21 94.7
MS.gene92078.t1 MTR_5g090700 29.119 261 153 10 174 407 206 461 9.91e-21 94.7
MS.gene92078.t1 MTR_8g008970 32.447 188 113 4 225 402 257 440 1.06e-20 95.1
MS.gene92078.t1 MTR_8g008970 34.146 164 99 4 225 387 596 751 2.40e-16 82.0
MS.gene92078.t1 MTR_8g088560 32.673 202 124 7 225 422 264 457 1.42e-20 94.0
MS.gene92078.t1 MTR_6g033675 27.848 237 146 6 187 402 208 440 1.77e-20 94.0
MS.gene92078.t1 MTR_7g102560 24.109 477 264 15 5 404 6 461 1.80e-20 94.0
MS.gene92078.t1 MTR_7g102490 34.483 174 104 4 225 389 278 450 2.95e-20 93.2
MS.gene92078.t1 MTR_7g102450 30.081 246 149 7 178 401 202 446 3.51e-20 92.8
MS.gene92078.t1 MTR_8g083280 30.180 222 138 7 209 424 249 459 3.91e-20 92.8
MS.gene92078.t1 MTR_7g071040 22.587 487 306 13 3 426 12 490 4.49e-20 92.8
MS.gene92078.t1 MTR_5g090620 27.376 263 157 9 174 407 203 460 5.00e-20 92.4
MS.gene92078.t1 MTR_8g074550 29.060 234 137 6 197 402 232 464 5.17e-20 92.4
MS.gene92078.t1 MTR_5g067170 32.804 189 110 5 221 393 262 449 6.69e-20 92.0
MS.gene92078.t1 MTR_3g084540 28.910 211 138 4 221 424 266 471 1.01e-19 91.7
MS.gene92078.t1 MTR_4g485640 28.755 233 141 8 188 396 409 640 1.07e-19 92.0
MS.gene92078.t1 MTR_6g033660 32.065 184 119 4 221 402 260 439 1.07e-19 91.3
MS.gene92078.t1 MTR_5g090630 28.958 259 147 10 184 407 194 450 1.08e-19 91.3
MS.gene92078.t1 MTR_8g083290 33.520 179 112 5 225 402 267 439 1.23e-19 91.3
MS.gene92078.t1 MTR_5g027210 25.660 265 162 4 180 412 212 473 1.32e-19 91.3
MS.gene92078.t1 MTR_4g008630 27.273 242 161 6 176 405 203 441 1.46e-19 90.9
MS.gene92078.t1 MTR_5g045960 24.262 474 272 18 7 408 8 466 1.48e-19 91.3
MS.gene92078.t1 MTR_0891s0010 28.704 216 136 6 189 395 52 258 1.50e-19 89.0
MS.gene92078.t1 MTR_5g090660 28.077 260 150 9 183 407 200 457 1.59e-19 91.3
MS.gene92078.t1 MTR_5g098930 27.660 235 145 6 204 415 228 460 1.65e-19 90.9
MS.gene92078.t1 MTR_7g070940 24.466 421 260 14 39 426 77 472 1.76e-19 90.9
MS.gene92078.t1 MTR_3g084530 30.890 191 119 5 221 404 266 450 3.73e-19 89.7
MS.gene92078.t1 MTR_5g090670 26.071 280 164 10 184 426 203 476 4.68e-19 89.4
MS.gene92078.t1 MTR_3g084520 29.843 191 121 5 221 404 266 450 4.77e-19 89.4
MS.gene92078.t1 MTR_3g479610 28.986 207 129 6 225 426 120 313 6.75e-19 87.4
MS.gene92078.t1 MTR_7g080950 30.978 184 116 6 221 404 253 425 6.93e-19 89.0
MS.gene92078.t1 MTR_6g038230 31.551 187 116 6 225 411 264 438 8.02e-19 88.6
MS.gene92078.t1 MTR_3g479520 27.869 244 156 8 189 422 245 478 8.58e-19 88.6
MS.gene92078.t1 MTR_6g013900 25.714 350 213 13 75 395 116 447 9.23e-19 88.6
MS.gene92078.t1 MTR_1g107350 32.778 180 115 5 225 402 269 444 1.10e-18 88.6
MS.gene92078.t1 MTR_3g079480 23.061 490 285 17 8 426 21 489 1.48e-18 88.2
MS.gene92078.t1 MTR_7g070930 22.803 478 290 15 1 408 1 469 2.06e-18 87.8
MS.gene92078.t1 MTR_8g090095 28.226 248 160 7 176 408 217 461 2.28e-18 87.4
MS.gene92078.t1 MTR_4g094920 29.245 212 138 8 221 426 275 480 2.74e-18 87.4
MS.gene92078.t1 MTR_4g117980 24.516 465 248 18 6 392 9 448 2.81e-18 87.0
MS.gene92078.t1 MTR_7g102520 33.333 189 114 5 222 400 276 462 2.81e-18 87.4
MS.gene92078.t1 MTR_7g012120 30.412 194 119 5 218 396 263 455 3.02e-18 87.0
MS.gene92078.t1 MTR_5g029800 31.319 182 110 4 218 385 257 437 3.82e-18 86.7
MS.gene92078.t1 MTR_2g034990 22.418 455 266 14 6 390 9 446 4.20e-18 86.7
MS.gene92078.t1 MTR_2g035040 29.897 194 117 5 225 404 173 361 4.21e-18 85.9
MS.gene92078.t1 MTR_7g070800 24.165 389 255 13 40 401 75 450 4.28e-18 86.7
MS.gene92078.t1 MTR_4g082820 27.295 403 221 14 7 352 6 393 5.38e-18 86.3
MS.gene92078.t1 MTR_6g038300 30.055 183 118 5 222 404 261 433 5.47e-18 86.3
MS.gene92078.t1 MTR_4g117950 27.083 240 143 7 178 390 193 427 6.76e-18 85.9
MS.gene92078.t1 MTR_1g107360 30.392 204 130 5 200 402 245 437 7.42e-18 85.9
MS.gene92078.t1 MTR_1g107380 27.660 235 148 8 204 424 244 470 7.53e-18 85.9
MS.gene92078.t1 MTR_4g095008 30.769 169 110 5 221 385 260 425 1.03e-17 85.5
MS.gene92078.t1 MTR_7g080940 29.508 183 118 5 222 404 259 430 1.14e-17 85.1
MS.gene92078.t1 MTR_0536s0010 24.454 458 238 20 6 390 19 441 1.85e-17 84.7
MS.gene92078.t1 MTR_1g107315 23.810 441 258 16 1 380 1 424 1.86e-17 84.7
MS.gene92078.t1 MTR_6g035265 28.205 195 123 5 222 401 256 448 2.01e-17 84.7
MS.gene92078.t1 MTR_5g040030 25.954 262 165 8 164 401 206 462 2.33e-17 84.3
MS.gene92078.t1 MTR_3g479490 26.733 202 138 5 226 426 282 474 2.35e-17 84.3
MS.gene92078.t1 MTR_3g049970 23.747 459 274 16 3 402 4 445 2.38e-17 84.3
MS.gene92078.t1 MTR_1g029540 25.926 243 164 6 176 405 199 438 2.57e-17 84.0
MS.gene92078.t1 MTR_7g080935 28.962 183 119 5 222 404 259 430 3.39e-17 84.0
MS.gene92078.t1 MTR_2g035020 31.111 180 109 4 225 390 268 446 3.45e-17 84.0
MS.gene92078.t1 MTR_5g090580 26.054 261 161 8 174 407 204 459 3.56e-17 84.0
MS.gene92078.t1 MTR_6g013990 26.271 236 150 8 180 402 229 453 3.91e-17 83.6
MS.gene92078.t1 MTR_6g014170 29.082 196 125 6 221 414 266 449 5.05e-17 83.2
MS.gene92078.t1 MTR_5g058320 26.190 378 217 17 45 388 79 428 5.05e-17 83.2
MS.gene92078.t1 MTR_5g016660 22.906 406 235 14 39 395 78 454 7.73e-17 82.8
MS.gene92078.t1 MTR_6g013920 25.688 327 194 13 99 395 140 447 7.80e-17 82.8
MS.gene92078.t1 MTR_5g090600 26.562 256 152 9 184 413 199 444 8.61e-17 82.4
MS.gene92078.t1 MTR_8g032950 31.217 189 111 6 223 395 264 449 1.00e-16 82.4
MS.gene92078.t1 MTR_7g070780 22.718 471 288 16 3 408 6 465 1.09e-16 82.4
MS.gene92078.t1 MTR_4g082810 33.529 170 104 3 204 365 240 408 1.20e-16 81.6
MS.gene92078.t1 MTR_0288s0020 28.634 227 140 8 178 402 230 436 1.39e-16 82.0
MS.gene92078.t1 MTR_3g069710 27.969 261 169 8 176 425 202 454 1.40e-16 82.0
MS.gene92078.t1 MTR_2g059240 30.000 190 115 4 188 365 229 412 2.50e-16 81.3
MS.gene92078.t1 MTR_4g117960 28.571 217 138 5 225 426 266 480 2.71e-16 81.3
MS.gene92078.t1 MTR_6g014020 29.348 184 116 6 221 402 284 455 2.88e-16 80.9
MS.gene92078.t1 MTR_8g056740 25.431 232 159 5 178 399 111 338 3.35e-16 80.5
MS.gene92078.t1 MTR_4g117890 27.111 225 134 8 225 424 260 479 3.55e-16 80.9
MS.gene92078.t1 MTR_6g014250 28.646 192 123 6 225 414 286 465 3.59e-16 80.9
MS.gene92078.t1 MTR_8g064870 30.851 188 120 6 221 402 266 449 3.62e-16 80.9
MS.gene92078.t1 MTR_6g014200 29.891 184 115 6 221 402 281 452 3.79e-16 80.5
MS.gene92078.t1 MTR_3g008010 31.395 172 105 6 225 393 286 447 3.79e-16 80.5
MS.gene92078.t1 MTR_7g470610 25.243 309 184 10 88 377 5 285 4.00e-16 79.0
MS.gene92078.t1 MTR_7g070583 25.243 309 184 10 88 377 5 285 4.00e-16 79.0
MS.gene92078.t1 MTR_8g059425 27.801 241 144 11 178 402 227 453 5.28e-16 80.1
MS.gene92078.t1 MTR_8g007585 30.000 180 112 6 225 402 200 367 6.04e-16 79.7
MS.gene92078.t1 MTR_5g070040 30.085 236 143 10 173 395 216 442 7.52e-16 79.7
MS.gene92078.t1 MTR_0536s0020 25.820 244 149 7 178 392 206 446 7.90e-16 79.7
MS.gene92078.t1 MTR_2g008210 31.818 176 111 6 221 395 278 445 8.44e-16 79.7
MS.gene92078.t1 MTR_8g064880 27.823 248 149 9 158 384 197 435 9.55e-16 79.3
MS.gene92078.t1 MTR_6g014190 29.891 184 115 6 221 402 91 262 9.70e-16 77.8
MS.gene92078.t1 MTR_6g035185 27.368 190 121 5 227 401 270 457 1.04e-15 79.3
MS.gene92078.t1 MTR_5g075440 28.085 235 150 6 183 408 213 437 1.50e-15 78.6
MS.gene92078.t1 MTR_6g014220 29.444 180 113 6 225 402 286 453 1.55e-15 79.0
MS.gene92078.t1 MTR_7g011470 27.386 241 145 8 178 402 215 441 1.76e-15 78.6
MS.gene92078.t1 MTR_7g011470 27.386 241 145 8 178 402 211 437 1.78e-15 78.6
MS.gene92078.t1 MTR_1g107375 30.256 195 124 5 208 402 247 429 2.55e-15 78.2
MS.gene92078.t1 MTR_6g011340 23.876 356 224 13 76 402 118 455 2.63e-15 78.2
MS.gene92078.t1 MTR_1g040310 23.919 393 234 16 32 384 75 442 2.64e-15 78.2
MS.gene92078.t1 MTR_3g031450 27.803 223 131 7 188 395 213 420 3.21e-15 77.8
MS.gene92078.t1 MTR_4g108250 27.315 216 144 5 221 426 275 487 3.23e-15 77.8
MS.gene92078.t1 MTR_7g070860 22.680 388 250 12 39 401 75 437 3.94e-15 77.4
MS.gene92078.t1 MTR_6g014240 28.804 184 117 6 221 402 251 422 4.21e-15 77.4
MS.gene92078.t1 MTR_7g071050 24.561 399 238 16 39 423 81 430 1.22e-14 75.9
MS.gene92078.t1 MTR_6g014270 28.804 184 117 6 221 402 283 454 1.25e-14 75.9
MS.gene92078.t1 MTR_6g013450 27.869 183 121 5 221 397 285 462 1.41e-14 75.9
MS.gene92078.t1 MTR_6g014310 28.333 180 115 6 225 402 289 456 1.43e-14 75.9
MS.gene92078.t1 MTR_5g016480 33.036 112 73 2 219 329 267 377 1.68e-14 75.5
MS.gene92078.t1 MTR_4g118000 28.409 176 106 5 225 385 256 426 2.07e-14 75.5
MS.gene92078.t1 MTR_0036s0220 28.409 176 115 5 221 396 282 446 6.11e-14 73.9
MS.gene92078.t1 MTR_6g014050 29.121 182 115 6 223 402 287 456 6.25e-14 73.9
MS.gene92078.t1 MTR_7g070870 23.582 335 233 11 39 362 87 409 1.51e-13 72.8
MS.gene92078.t1 MTR_6g014150 28.994 169 108 5 221 387 281 439 1.55e-13 72.8
MS.gene92078.t1 MTR_5g072820 25.328 229 143 6 187 402 211 424 2.05e-13 72.0
MS.gene92078.t1 MTR_5g004940 34.188 117 75 2 225 340 197 312 2.07e-13 72.0
MS.gene92078.t1 MTR_3g479470 30.216 139 94 3 225 363 288 423 2.27e-13 72.0
MS.gene92078.t1 MTR_5g072810 20.000 440 285 13 8 402 12 429 2.36e-13 72.0
MS.gene92078.t1 MTR_6g013960 23.171 328 213 13 100 402 142 455 2.96e-13 71.6
MS.gene92078.t1 MTR_1g107285 30.120 166 105 4 217 380 263 419 5.17e-13 70.9
MS.gene92078.t1 MTR_6g014290 27.222 180 117 6 225 402 286 453 5.50e-13 70.9
MS.gene92078.t1 MTR_5g072860 26.050 238 152 6 176 402 217 441 5.55e-13 70.9
MS.gene92078.t1 MTR_6g014040 28.723 188 112 7 221 402 285 456 9.04e-13 70.1
MS.gene92078.t1 MTR_5g464810 28.571 175 114 5 221 395 282 445 9.86e-13 70.1
MS.gene92078.t1 MTR_5g064240 28.571 175 114 5 221 395 282 445 9.86e-13 70.1
MS.gene92078.t1 MTR_5g072830 24.017 229 146 6 187 402 211 424 1.48e-12 69.3
MS.gene92078.t1 MTR_7g080900 26.630 184 125 5 225 408 264 437 3.47e-12 68.2
MS.gene92078.t1 MTR_6g078320 23.490 447 265 16 8 388 11 446 4.96e-12 67.8
MS.gene92078.t1 MTR_8g009840 30.000 160 96 3 242 387 333 490 5.04e-12 68.2
MS.gene92078.t1 MTR_7g039550 24.107 224 145 5 188 389 5 225 5.16e-12 66.6
MS.gene92078.t1 MTR_2086s0010 26.846 149 100 4 247 395 1 140 8.22e-12 63.9
MS.gene92078.t1 MTR_1996s0010 26.846 149 100 4 247 395 1 140 8.22e-12 63.9
MS.gene92078.t1 MTR_4g094220 26.404 178 122 4 225 402 286 454 1.06e-11 67.0
MS.gene92078.t1 MTR_0477s0010 27.717 184 119 6 221 402 121 292 2.10e-11 65.1
MS.gene92078.t1 MTR_5g031860 26.842 190 122 6 225 404 280 462 3.10e-11 65.5
MS.gene92078.t1 MTR_5g072840 22.566 226 153 5 187 402 211 424 3.13e-11 65.5
MS.gene92078.t1 MTR_0536s0030 30.534 131 78 4 280 400 197 324 9.16e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene92078.t1 AT5G54010 42.826 453 216 7 7 426 5 447 4.61e-128 377
MS.gene92078.t1 AT5G53990 42.605 453 211 6 7 426 5 441 5.55e-126 372
MS.gene92078.t1 AT4G27560 40.570 456 221 7 7 426 6 447 1.53e-121 361
MS.gene92078.t1 AT4G27570 40.570 456 221 8 7 426 6 447 7.06e-121 359
MS.gene92078.t1 AT4G09500 40.879 455 220 9 5 426 3 441 4.54e-119 354
MS.gene92078.t1 AT1G64920 40.700 457 218 7 7 426 5 445 1.22e-118 353
MS.gene92078.t1 AT2G22930 41.538 455 217 7 5 426 3 441 1.56e-117 350
MS.gene92078.t1 AT3G29630 40.177 453 217 7 7 422 5 440 1.30e-116 348
MS.gene92078.t1 AT1G64910 39.825 457 218 7 7 426 5 441 5.65e-115 344
MS.gene92078.t1 AT5G54060 40.347 461 228 9 7 426 12 466 1.48e-113 341
MS.gene92078.t1 AT3G29630 39.778 450 197 8 7 422 5 414 4.05e-110 331
MS.gene92078.t1 AT4G09500 39.207 454 204 10 5 426 3 416 1.65e-106 321
MS.gene92078.t1 AT1G50580 38.411 453 223 8 7 422 5 438 3.08e-103 314
MS.gene92078.t1 AT5G65550 29.936 471 260 15 5 422 6 459 1.24e-57 196
MS.gene92078.t1 AT2G22590 31.236 461 264 14 7 422 14 466 3.17e-56 192
MS.gene92078.t1 AT5G49690 29.890 455 264 11 7 420 9 449 7.90e-55 189
MS.gene92078.t1 AT2G22930 32.877 219 101 4 5 191 3 207 7.87e-31 120
MS.gene92078.t1 AT2G22930 37.143 105 61 3 325 426 187 289 6.17e-14 72.4
MS.gene92078.t1 AT5G12890 26.501 483 256 19 4 411 6 464 8.12e-31 124
MS.gene92078.t1 AT5G03490 26.116 448 260 14 2 402 14 437 1.27e-29 120
MS.gene92078.t1 AT4G36770 35.586 222 124 6 195 403 225 440 8.05e-29 117
MS.gene92078.t1 AT4G34135 26.233 446 247 17 7 384 10 441 7.31e-28 115
MS.gene92078.t1 AT2G15480 26.030 461 268 14 7 402 9 461 1.35e-27 114
MS.gene92078.t1 AT4G34131 32.549 255 146 7 160 396 206 452 1.64e-27 114
MS.gene92078.t1 AT2G15490 25.499 451 268 12 7 396 6 449 3.71e-27 113
MS.gene92078.t1 AT2G15490 25.551 454 267 13 7 396 6 452 3.81e-27 113
MS.gene92078.t1 AT2G15480 25.499 451 268 12 7 396 9 452 5.69e-27 113
MS.gene92078.t1 AT2G18570 31.174 247 155 4 170 402 197 442 7.94e-27 112
MS.gene92078.t1 AT1G51210 26.591 440 250 15 8 401 20 432 2.08e-26 110
MS.gene92078.t1 AT2G31750 36.111 180 107 4 225 404 261 432 2.09e-26 110
MS.gene92078.t1 AT2G31750 36.111 180 107 4 225 404 261 432 2.55e-26 111
MS.gene92078.t1 AT1G05675 26.424 439 263 13 8 402 6 428 4.43e-26 110
MS.gene92078.t1 AT1G73880 24.109 477 294 15 2 425 8 469 1.42e-25 108
MS.gene92078.t1 AT1G10400 23.770 488 269 20 7 420 6 464 1.94e-25 108
MS.gene92078.t1 AT2G36800 28.172 465 245 21 6 395 10 460 2.97e-25 108
MS.gene92078.t1 AT2G16890 25.566 442 264 17 8 397 9 437 4.52e-25 107
MS.gene92078.t1 AT2G36750 27.212 452 253 20 5 390 7 448 5.60e-25 107
MS.gene92078.t1 AT4G01070 34.862 218 124 6 204 407 235 448 7.95e-25 106
MS.gene92078.t1 AT4G34138 29.961 257 153 6 188 426 231 478 1.60e-24 105
MS.gene92078.t1 AT2G31790 24.528 477 274 18 8 426 8 456 5.34e-24 103
MS.gene92078.t1 AT1G05680 33.333 240 134 8 179 402 199 428 6.68e-24 103
MS.gene92078.t1 AT1G01420 34.703 219 122 6 204 407 235 447 7.79e-24 103
MS.gene92078.t1 AT1G01420 34.703 219 122 6 204 407 238 450 8.80e-24 103
MS.gene92078.t1 AT2G18560 28.972 214 143 2 197 402 140 352 1.37e-23 102
MS.gene92078.t1 AT2G36760 26.386 451 257 18 5 389 11 452 1.69e-23 102
MS.gene92078.t1 AT3G53150 26.216 473 251 20 7 395 21 479 2.35e-23 102
MS.gene92078.t1 AT2G16890 24.941 425 256 15 8 380 9 422 1.52e-22 99.4
MS.gene92078.t1 AT3G50740 30.180 222 137 3 197 403 231 449 2.16e-22 99.8
MS.gene92078.t1 AT4G15260 29.954 217 133 5 225 424 142 356 9.51e-22 96.3
MS.gene92078.t1 AT2G43820 24.145 468 260 17 8 417 7 437 1.10e-21 97.1
MS.gene92078.t1 AT2G29730 32.212 208 127 6 195 393 230 432 2.43e-21 96.3
MS.gene92078.t1 AT2G36780 36.649 191 107 6 218 395 272 461 2.67e-21 96.3
MS.gene92078.t1 AT5G14860 25.897 390 236 14 36 397 81 445 3.15e-21 96.3
MS.gene92078.t1 AT2G36970 28.270 237 150 6 182 405 220 449 3.33e-21 96.3
MS.gene92078.t1 AT2G36770 26.419 458 263 18 5 395 11 461 3.97e-21 95.9
MS.gene92078.t1 AT3G21800 30.233 215 131 4 225 422 263 475 6.29e-21 95.1
MS.gene92078.t1 AT2G43840 31.579 190 120 4 227 416 257 436 6.43e-21 95.1
MS.gene92078.t1 AT2G43840 31.579 190 120 4 227 416 257 436 6.61e-21 94.7
MS.gene92078.t1 AT4G15280 30.556 216 132 4 225 424 294 507 7.52e-21 95.1
MS.gene92078.t1 AT4G15280 30.556 216 132 4 225 424 262 475 7.78e-21 94.7
MS.gene92078.t1 AT2G30140 23.718 468 292 15 2 424 5 452 1.79e-20 93.6
MS.gene92078.t1 AT2G30150 23.950 476 284 18 4 426 6 456 2.20e-20 93.6
MS.gene92078.t1 AT3G22250 33.333 198 110 8 225 418 274 453 2.91e-20 93.2
MS.gene92078.t1 AT3G21790 27.881 269 159 7 187 422 212 478 3.71e-20 92.8
MS.gene92078.t1 AT3G21760 29.907 214 132 5 225 422 269 480 5.18e-20 92.4
MS.gene92078.t1 AT2G30140 23.305 472 290 16 2 424 5 453 5.53e-20 92.0
MS.gene92078.t1 AT3G53160 24.242 462 273 17 1 395 1 452 6.08e-20 92.4
MS.gene92078.t1 AT1G07250 24.929 353 232 11 91 424 136 474 6.59e-20 92.0
MS.gene92078.t1 AT5G05870 29.339 242 155 7 174 408 204 436 1.82e-19 90.9
MS.gene92078.t1 AT3G21780 29.167 216 135 5 225 424 257 470 2.18e-19 90.5
MS.gene92078.t1 AT5G59580 29.885 261 161 10 173 422 198 447 2.78e-19 90.1
MS.gene92078.t1 AT5G66690 29.767 215 131 4 204 403 233 442 2.84e-19 90.1
MS.gene92078.t1 AT5G26310 29.302 215 132 4 204 403 233 442 3.50e-19 90.1
MS.gene92078.t1 AT1G07260 29.258 229 150 6 204 422 245 471 4.24e-19 89.7
MS.gene92078.t1 AT5G59590 29.730 259 164 10 173 422 200 449 5.64e-19 89.0
MS.gene92078.t1 AT3G21750 27.386 241 153 5 204 424 232 470 7.38e-19 89.0
MS.gene92078.t1 AT2G30150 23.707 464 279 17 13 426 2 440 9.25e-19 88.6
MS.gene92078.t1 AT1G01390 33.333 204 119 6 217 407 249 448 1.33e-18 88.2
MS.gene92078.t1 AT4G15550 29.464 224 145 6 209 424 253 471 1.38e-18 88.2
MS.gene92078.t1 AT1G01390 33.333 204 119 6 217 407 266 465 1.53e-18 88.2
MS.gene92078.t1 AT2G29710 33.714 175 103 5 225 393 265 432 1.67e-18 87.8
MS.gene92078.t1 AT3G55700 28.226 248 160 6 174 413 203 440 2.83e-18 87.0
MS.gene92078.t1 AT4G15480 30.978 184 120 6 222 402 275 454 2.86e-18 87.4
MS.gene92078.t1 AT4G15500 31.111 180 114 6 225 402 267 438 3.65e-18 87.0
MS.gene92078.t1 AT3G46670 30.802 237 148 9 166 396 194 420 1.04e-17 85.5
MS.gene92078.t1 AT1G24100 27.228 202 138 4 225 426 266 458 1.13e-17 85.1
MS.gene92078.t1 AT2G36790 34.574 188 109 5 221 395 274 460 1.13e-17 85.5
MS.gene92078.t1 AT3G21560 29.412 204 130 7 225 422 277 472 1.15e-17 85.5
MS.gene92078.t1 AT2G29740 32.000 200 126 6 204 395 250 447 1.74e-17 84.7
MS.gene92078.t1 AT1G07240 30.702 228 146 7 204 422 251 475 1.77e-17 84.7
MS.gene92078.t1 AT5G05880 27.876 226 149 7 175 393 200 418 1.81e-17 84.7
MS.gene92078.t1 AT3G16520 31.928 166 107 3 225 386 261 424 2.90e-17 84.0
MS.gene92078.t1 AT3G16520 29.897 194 125 4 225 414 261 447 3.07e-17 84.0
MS.gene92078.t1 AT3G16520 31.928 166 107 3 225 386 261 424 3.29e-17 84.0
MS.gene92078.t1 AT3G55710 32.500 160 99 5 227 384 263 415 5.14e-17 83.2
MS.gene92078.t1 AT5G05860 26.891 238 157 7 178 408 202 429 7.52e-17 82.8
MS.gene92078.t1 AT3G11340 31.214 173 107 6 225 395 251 413 7.70e-17 82.8
MS.gene92078.t1 AT2G23250 29.808 208 130 6 203 400 210 411 8.41e-17 82.4
MS.gene92078.t1 AT4G14090 30.198 202 124 8 221 416 255 445 1.84e-16 81.6
MS.gene92078.t1 AT5G05890 28.017 232 154 7 175 400 204 428 2.30e-16 81.3
MS.gene92078.t1 AT1G05560 28.251 223 139 6 209 416 275 491 2.67e-16 81.3
MS.gene92078.t1 AT1G05560 27.803 223 140 6 209 416 225 441 3.48e-16 80.9
MS.gene92078.t1 AT4G15490 27.778 180 120 6 225 402 271 442 4.67e-16 80.5
MS.gene92078.t1 AT3G46690 26.829 246 166 7 170 408 196 434 4.84e-16 80.1
MS.gene92078.t1 AT2G23260 29.775 178 117 5 225 402 260 429 5.47e-16 80.1
MS.gene92078.t1 AT2G28080 25.417 240 157 7 182 403 220 455 1.62e-15 79.0
MS.gene92078.t1 AT1G05530 26.122 245 157 6 190 416 206 444 1.63e-15 78.6
MS.gene92078.t1 AT1G06000 25.313 399 220 14 8 362 10 374 4.35e-15 77.4
MS.gene92078.t1 AT1G22400 31.429 175 110 5 221 395 285 449 6.15e-15 77.0
MS.gene92078.t1 AT1G30530 28.899 218 130 8 211 418 241 443 1.03e-14 76.3
MS.gene92078.t1 AT3G02100 29.348 184 111 5 225 408 277 441 1.28e-14 75.9
MS.gene92078.t1 AT1G22360 29.348 184 120 5 221 404 281 454 1.99e-14 75.5
MS.gene92078.t1 AT1G78270 27.717 184 124 5 221 404 283 457 3.63e-14 74.7
MS.gene92078.t1 AT2G26480 27.234 235 149 8 189 415 209 429 8.49e-14 73.6
MS.gene92078.t1 AT5G05900 26.230 244 158 10 175 404 205 440 2.76e-13 71.6
MS.gene92078.t1 AT1G22340 26.087 184 127 4 221 404 284 458 4.96e-13 71.2
MS.gene92078.t1 AT1G22380 28.804 184 121 5 221 404 284 457 1.17e-12 70.1
MS.gene92078.t1 AT3G46720 30.508 177 100 7 225 396 254 412 2.93e-12 68.6
MS.gene92078.t1 AT1G22360 30.282 142 96 3 221 362 281 419 1.74e-11 66.2

Find 81 sgRNAs with CRISPR-Local

Find 99 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTAAACCTGTTCTGCTTTC+AGG 0.094372 2.4:-15920533 MS.gene92078:CDS
AAAGGAAAAGGAATTGTTTA+TGG 0.231240 2.4:-15920263 MS.gene92078:CDS
TCCCACAGAAAACTAGAATT+TGG 0.233485 2.4:-15920674 MS.gene92078:CDS
AGGATATTGAACTTCTTCTA+AGG 0.265020 2.4:-15920937 MS.gene92078:CDS
AAATGGTTAAAATGGCTTAA+AGG 0.265256 2.4:-15920470 MS.gene92078:CDS
CCAAGGTAAGCTGATGATAT+TGG 0.272835 2.4:+15920815 None:intergenic
ATCACAGTTCCTCATGTTAA+TGG 0.297077 2.4:-15921043 MS.gene92078:intron
TCATTCTTGCATTCATGATA+TGG 0.306881 2.4:+15920105 None:intergenic
AAGGAATTGTTTATGGAAGT+TGG 0.308496 2.4:-15920256 MS.gene92078:CDS
GGGTTTAATGAAAGAGTTAA+AGG 0.311231 2.4:-15920281 MS.gene92078:CDS
ACTCTTTCATTAAACCCTTC+AGG 0.318561 2.4:+15920287 None:intergenic
TTCATGCGAATAAAACTTGA+TGG 0.329442 2.4:+15920712 None:intergenic
GATCTCATGAAACCACCTTC+AGG 0.343673 2.4:-15920749 MS.gene92078:CDS
TTGCTTGGTCTTGAATTAAC+AGG 0.345544 2.4:-15920371 MS.gene92078:CDS
GTTCAATATCCTTCTCAGTT+TGG 0.347676 2.4:+15920948 None:intergenic
TAAAACTTGATGGATGAATC+AGG 0.371051 2.4:+15920722 None:intergenic
GCCACTAAAAGCTACATTAG+AGG 0.374293 2.4:-15920495 MS.gene92078:CDS
TTTAGTGGCTCAGGTAATAT+AGG 0.376028 2.4:+15920509 None:intergenic
GCAGCACTTAAGCCACCTAT+TGG 0.380205 2.4:-15920335 MS.gene92078:CDS
GGCTTAAGTGCTGCAAGAAA+TGG 0.387827 2.4:+15920344 None:intergenic
TTGTTAGAGAGGCGGAGAAA+TGG 0.392849 2.4:+15921170 None:intergenic
TTACACGATCGCTCTGACAT+AGG 0.396357 2.4:-15920638 MS.gene92078:CDS
AATGTTTCCATGGTTTGCTA+TGG 0.406344 2.4:-15921204 MS.gene92078:CDS
AAAGGATGCAGAGAAATTGA+TGG 0.417369 2.4:-15920587 MS.gene92078:CDS
CAGTTTCAAGCGTTGTTGCT+TGG 0.420003 2.4:-15920386 MS.gene92078:CDS
AAATCAAAGAAAACTATTTG+TGG 0.424765 2.4:+15920905 None:intergenic
AATGAAAGAGTTAAAGGAAA+AGG 0.433814 2.4:-15920275 MS.gene92078:CDS
TCTGTGGTTTATTGTGCATA+TGG 0.439244 2.4:-15920434 MS.gene92078:CDS
ATCTCATGAAACCACCTTCA+GGG 0.449830 2.4:-15920748 MS.gene92078:CDS
ATGTTTCCATGGTTTGCTAT+GGG 0.453158 2.4:-15921203 MS.gene92078:CDS
ATGGATGATGAGAATGAAGT+TGG 0.453273 2.4:-15919987 MS.gene92078:CDS
TCAATAGTCTGAAATCCAAT+AGG 0.454018 2.4:+15920320 None:intergenic
TCTAACAAATTAGCAATAAG+AGG 0.459115 2.4:-15921155 MS.gene92078:intron
ATAGGACCTGAAAGCAGAAC+AGG 0.461457 2.4:+15920527 None:intergenic
CTTGCATTCATGATATGGTC+AGG 0.468145 2.4:+15920110 None:intergenic
GTTGAGAAAGGTGATGAAGA+TGG 0.473698 2.4:-15920053 MS.gene92078:CDS
ATCCTTCTCAGTTTGGTCCA+TGG 0.480528 2.4:+15920955 None:intergenic
TTGAAGAAGCTTTACCTGAA+GGG 0.490189 2.4:-15920301 MS.gene92078:CDS
AATCTTCCTTGACTATGTCT+TGG 0.492827 2.4:+15920785 None:intergenic
CCCTCTCATTGCTACATCCA+TGG 0.494384 2.4:-15920972 MS.gene92078:CDS
TGCACATAGCAATGTTTCCA+TGG 0.504753 2.4:-15921214 MS.gene92078:CDS
TCAGATGCAGTTGCTTTCAA+AGG 0.514738 2.4:-15920605 MS.gene92078:CDS
CCAATATCATCAGCTTACCT+TGG 0.525225 2.4:-15920815 MS.gene92078:CDS
TATGTCTTGGTATATTTCCA+AGG 0.530714 2.4:+15920798 None:intergenic
TGTTTCCATGGTTTGCTATG+GGG 0.545112 2.4:-15921202 MS.gene92078:CDS
GGATATTGAACTTCTTCTAA+GGG 0.545788 2.4:-15920936 MS.gene92078:CDS
GTTGGTGTAGAAGTTGAGAA+AGG 0.554703 2.4:-15920065 MS.gene92078:CDS
AGGATTCAAACCTGGTTCTG+TGG 0.559933 2.4:-15920450 MS.gene92078:CDS
TGGAGCTGCTTCTATAACTG+AGG 0.562901 2.4:-15920177 MS.gene92078:CDS
AGAAAACTAGAATTTGGAAG+TGG 0.563912 2.4:-15920668 MS.gene92078:CDS
TATTGTGCATATGGAAGTGA+AGG 0.565062 2.4:-15920425 MS.gene92078:CDS
ATTGAAGAAGCTTTACCTGA+AGG 0.566056 2.4:-15920302 MS.gene92078:CDS
ATTGCTATGTGCAAAGGAGG+AGG 0.570238 2.4:+15921224 None:intergenic
GCACAATAAACCACAGAACC+AGG 0.572498 2.4:+15920440 None:intergenic
TTATTGCTAATTTGTTAGAG+AGG 0.575257 2.4:+15921159 None:intergenic
TGGCTTAAAGGATTCAAACC+TGG 0.583848 2.4:-15920458 MS.gene92078:CDS
AATGATGAGTGAAAAGATGA+AGG 0.586314 2.4:-15920087 MS.gene92078:CDS
AATGAGAGGGAATAAAGAAG+AGG 0.588167 2.4:+15920985 None:intergenic
ATGAGTGAAAAGATGAAGGT+TGG 0.593081 2.4:-15920083 MS.gene92078:CDS
AACATTGCTATGTGCAAAGG+AGG 0.593375 2.4:+15921221 None:intergenic
CAAAGGAGGAGGAGAATCCA+TGG 0.596316 2.4:+15921235 None:intergenic
GGAAACATTGCTATGTGCAA+AGG 0.601320 2.4:+15921218 None:intergenic
AAAACTTGATGGATGAATCA+GGG 0.602785 2.4:+15920723 None:intergenic
ACTTGTTAACACGTGTCAGT+TGG 0.603876 2.4:-15920153 MS.gene92078:CDS
ATGAGAGGGAATAAAGAAGA+GGG 0.605864 2.4:+15920986 None:intergenic
TTGCTAATTTGTTAGAGAGG+CGG 0.613040 2.4:+15921162 None:intergenic
GATGAATCAGGGAACCCTGA+AGG 0.613809 2.4:+15920734 None:intergenic
CCATGGATGTAGCAATGAGA+GGG 0.615112 2.4:+15920972 None:intergenic
CAAAGCTGTGAGAATTGTGA+TGG 0.617527 2.4:-15920006 MS.gene92078:CDS
ATCCATGGACCAAACTGAGA+AGG 0.618561 2.4:-15920957 MS.gene92078:CDS
ATAGTCTGAAATCCAATAGG+TGG 0.626788 2.4:+15920323 None:intergenic
GTTATGAAACATCCAACAGA+AGG 0.628836 2.4:+15920206 None:intergenic
TCCATGGATGTAGCAATGAG+AGG 0.638914 2.4:+15920971 None:intergenic
AATATACCAAGACATAGTCA+AGG 0.642666 2.4:-15920791 MS.gene92078:CDS
GGAGCTGCTTCTATAACTGA+GGG 0.647559 2.4:-15920176 MS.gene92078:CDS
GAATCAGGGAACCCTGAAGG+TGG 0.649118 2.4:+15920737 None:intergenic
AAGTGCCCCATAGCAAACCA+TGG 0.661811 2.4:+15921197 None:intergenic
GAAGTAGTTTCAGCATCATG+AGG 0.663497 2.4:+15921016 None:intergenic
TGAGGAAGACCATTAACATG+AGG 0.685206 2.4:+15921034 None:intergenic
ATATGGTCAGGATCTACACG+TGG 0.742139 2.4:+15920122 None:intergenic
GGATGTTTCATAACACACTG+TGG 0.766209 2.4:-15920197 MS.gene92078:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTCTTTGATTTTCAATAT+TGG - chr2.4:15920216-15920235 MS.gene92078:CDS 15.0%
!! AAATCAAAGAAAACTATTTG+TGG + chr2.4:15920209-15920228 None:intergenic 20.0%
!!! AATTATCTTCAAACTGTTTT+TGG - chr2.4:15920557-15920576 MS.gene92078:CDS 20.0%
!!! TGAAACTGATTTTTTTCTAA+TGG + chr2.4:15920713-15920732 None:intergenic 20.0%
! AAAGGAAAAGGAATTGTTTA+TGG - chr2.4:15920848-15920867 MS.gene92078:CDS 25.0%
! AAATGGTTAAAATGGCTTAA+AGG - chr2.4:15920641-15920660 MS.gene92078:CDS 25.0%
! AATGAAAGAGTTAAAGGAAA+AGG - chr2.4:15920836-15920855 MS.gene92078:CDS 25.0%
! TAGAGGAAAAATGGTTAAAA+TGG - chr2.4:15920633-15920652 MS.gene92078:CDS 25.0%
! TCTAACAAATTAGCAATAAG+AGG - chr2.4:15919956-15919975 MS.gene92078:CDS 25.0%
!!! TTATTGCTAATTTGTTAGAG+AGG + chr2.4:15919955-15919974 None:intergenic 25.0%
AAGCTACATTAGAGGAAAAA+TGG - chr2.4:15920624-15920643 MS.gene92078:CDS 30.0%
AAGGAATTGTTTATGGAAGT+TGG - chr2.4:15920855-15920874 MS.gene92078:CDS 30.0%
AATATACCAAGACATAGTCA+AGG - chr2.4:15920320-15920339 MS.gene92078:CDS 30.0%
AATGATGAGTGAAAAGATGA+AGG - chr2.4:15921024-15921043 MS.gene92078:CDS 30.0%
AGAAAACTAGAATTTGGAAG+TGG - chr2.4:15920443-15920462 MS.gene92078:CDS 30.0%
AGGATATTGAACTTCTTCTA+AGG - chr2.4:15920174-15920193 MS.gene92078:CDS 30.0%
GGAACAAAGGTAATAAGATT+TGG + chr2.4:15920047-15920066 None:intergenic 30.0%
GGATATTGAACTTCTTCTAA+GGG - chr2.4:15920175-15920194 MS.gene92078:CDS 30.0%
GGGTTTAATGAAAGAGTTAA+AGG - chr2.4:15920830-15920849 MS.gene92078:CDS 30.0%
TATGTCTTGGTATATTTCCA+AGG + chr2.4:15920316-15920335 None:intergenic 30.0%
TCATTCTTGCATTCATGATA+TGG + chr2.4:15921009-15921028 None:intergenic 30.0%
TTCATGCGAATAAAACTTGA+TGG + chr2.4:15920402-15920421 None:intergenic 30.0%
! AAAACTTGATGGATGAATCA+GGG + chr2.4:15920391-15920410 None:intergenic 30.0%
! TAAAACTTGATGGATGAATC+AGG + chr2.4:15920392-15920411 None:intergenic 30.0%
! TCAATAGTCTGAAATCCAAT+AGG + chr2.4:15920794-15920813 None:intergenic 30.0%
!!! ACTTGTTGAGTGTTTTTTTC+AGG + chr2.4:15920004-15920023 None:intergenic 30.0%
!!! ATTTTAGAACATCCTTCTGT+TGG - chr2.4:15920893-15920912 MS.gene92078:CDS 30.0%
!!! CTTGTTGAGTGTTTTTTTCA+GGG + chr2.4:15920003-15920022 None:intergenic 30.0%
!!! TCCAAATTCTAGTTTTCTGT+GGG + chr2.4:15920441-15920460 None:intergenic 30.0%
!!! TTCCAAATTCTAGTTTTCTG+TGG + chr2.4:15920442-15920461 None:intergenic 30.0%
AAAGGATGCAGAGAAATTGA+TGG - chr2.4:15920524-15920543 MS.gene92078:CDS 35.0%
AATCTTCCTTGACTATGTCT+TGG + chr2.4:15920329-15920348 None:intergenic 35.0%
AATGAGAGGGAATAAAGAAG+AGG + chr2.4:15920129-15920148 None:intergenic 35.0%
ACTCTTTCATTAAACCCTTC+AGG + chr2.4:15920827-15920846 None:intergenic 35.0%
ATCACAGTTCCTCATGTTAA+TGG - chr2.4:15920068-15920087 MS.gene92078:CDS 35.0%
ATGAGAGGGAATAAAGAAGA+GGG + chr2.4:15920128-15920147 None:intergenic 35.0%
ATGAGTGAAAAGATGAAGGT+TGG - chr2.4:15921028-15921047 MS.gene92078:CDS 35.0%
ATGGATGATGAGAATGAAGT+TGG - chr2.4:15921124-15921143 MS.gene92078:intron 35.0%
ATTGAAGAAGCTTTACCTGA+AGG - chr2.4:15920809-15920828 MS.gene92078:CDS 35.0%
CCAAACTTGACTCAAAAACT+TGG - chr2.4:15920242-15920261 MS.gene92078:CDS 35.0%
GTTATGAAACATCCAACAGA+AGG + chr2.4:15920908-15920927 None:intergenic 35.0%
GTTCAATATCCTTCTCAGTT+TGG + chr2.4:15920166-15920185 None:intergenic 35.0%
TATTGTGCATATGGAAGTGA+AGG - chr2.4:15920686-15920705 MS.gene92078:CDS 35.0%
TCCCACAGAAAACTAGAATT+TGG - chr2.4:15920437-15920456 MS.gene92078:CDS 35.0%
TCTGTGGTTTATTGTGCATA+TGG - chr2.4:15920677-15920696 MS.gene92078:CDS 35.0%
TTAACATGAGGAACTGTGAT+AGG + chr2.4:15920068-15920087 None:intergenic 35.0%
TTGAAGAAGCTTTACCTGAA+GGG - chr2.4:15920810-15920829 MS.gene92078:CDS 35.0%
TTTAGTGGCTCAGGTAATAT+AGG + chr2.4:15920605-15920624 None:intergenic 35.0%
! ATAGTCTGAAATCCAATAGG+TGG + chr2.4:15920791-15920810 None:intergenic 35.0%
! TAGTTTTCTGTGGGAAACTA+GGG + chr2.4:15920432-15920451 None:intergenic 35.0%
! TCCTCTAATGTAGCTTTTAG+TGG + chr2.4:15920620-15920639 None:intergenic 35.0%
!! AATGTTTCCATGGTTTGCTA+TGG - chr2.4:15919907-15919926 MS.gene92078:CDS 35.0%
!! ATGTTTCCATGGTTTGCTAT+GGG - chr2.4:15919908-15919927 MS.gene92078:CDS 35.0%
!! TTGCTAATTTGTTAGAGAGG+CGG + chr2.4:15919952-15919971 None:intergenic 35.0%
!! TTGCTTGGTCTTGAATTAAC+AGG - chr2.4:15920740-15920759 MS.gene92078:CDS 35.0%
!!! CCAAGTTTTTGAGTCAAGTT+TGG + chr2.4:15920245-15920264 None:intergenic 35.0%
AACATTGCTATGTGCAAAGG+AGG + chr2.4:15919893-15919912 None:intergenic 40.0%
AGGAACTGTGATAGGAACAA+AGG + chr2.4:15920060-15920079 None:intergenic 40.0%
ATCTCATGAAACCACCTTCA+GGG - chr2.4:15920363-15920382 MS.gene92078:CDS 40.0%
CAAAGCTGTGAGAATTGTGA+TGG - chr2.4:15921105-15921124 MS.gene92078:intron 40.0%
CCAAGGTAAGCTGATGATAT+TGG + chr2.4:15920299-15920318 None:intergenic 40.0%
CCAATATCATCAGCTTACCT+TGG - chr2.4:15920296-15920315 MS.gene92078:CDS 40.0%
CTTGCATTCATGATATGGTC+AGG + chr2.4:15921004-15921023 None:intergenic 40.0%
GAAGTAGTTTCAGCATCATG+AGG + chr2.4:15920098-15920117 None:intergenic 40.0%
GCCACTAAAAGCTACATTAG+AGG - chr2.4:15920616-15920635 MS.gene92078:CDS 40.0%
GGAAACATTGCTATGTGCAA+AGG + chr2.4:15919896-15919915 None:intergenic 40.0%
GGATGTTTCATAACACACTG+TGG - chr2.4:15920914-15920933 MS.gene92078:CDS 40.0%
GTTGAGAAAGGTGATGAAGA+TGG - chr2.4:15921058-15921077 MS.gene92078:intron 40.0%
GTTGGTGTAGAAGTTGAGAA+AGG - chr2.4:15921046-15921065 MS.gene92078:intron 40.0%
TGAGGAAGACCATTAACATG+AGG + chr2.4:15920080-15920099 None:intergenic 40.0%
TGCACATAGCAATGTTTCCA+TGG - chr2.4:15919897-15919916 MS.gene92078:CDS 40.0%
TGGCTTAAAGGATTCAAACC+TGG - chr2.4:15920653-15920672 MS.gene92078:CDS 40.0%
! AATGTAGCTTTTAGTGGCTC+AGG + chr2.4:15920614-15920633 None:intergenic 40.0%
! ACTTGTTAACACGTGTCAGT+TGG - chr2.4:15920958-15920977 MS.gene92078:CDS 40.0%
! TCAGATGCAGTTGCTTTCAA+AGG - chr2.4:15920506-15920525 MS.gene92078:CDS 40.0%
!! CTAGTTTTCTGTGGGAAACT+AGG + chr2.4:15920433-15920452 None:intergenic 40.0%
!! TGTTTCCATGGTTTGCTATG+GGG - chr2.4:15919909-15919928 MS.gene92078:CDS 40.0%
ATAGGACCTGAAAGCAGAAC+AGG + chr2.4:15920587-15920606 None:intergenic 45.0%
ATATGGTCAGGATCTACACG+TGG + chr2.4:15920992-15921011 None:intergenic 45.0%
ATCCATGGACCAAACTGAGA+AGG - chr2.4:15920154-15920173 MS.gene92078:CDS 45.0%
ATCCTTCTCAGTTTGGTCCA+TGG + chr2.4:15920159-15920178 None:intergenic 45.0%
ATTGCTATGTGCAAAGGAGG+AGG + chr2.4:15919890-15919909 None:intergenic 45.0%
CCATGGATGTAGCAATGAGA+GGG + chr2.4:15920142-15920161 None:intergenic 45.0%
GATCTCATGAAACCACCTTC+AGG - chr2.4:15920362-15920381 MS.gene92078:CDS 45.0%
GCACAATAAACCACAGAACC+AGG + chr2.4:15920674-15920693 None:intergenic 45.0%
GGAGCTGCTTCTATAACTGA+GGG - chr2.4:15920935-15920954 MS.gene92078:CDS 45.0%
GGTAAACCTGTTCTGCTTTC+AGG - chr2.4:15920578-15920597 MS.gene92078:CDS 45.0%
TCCATGGATGTAGCAATGAG+AGG + chr2.4:15920143-15920162 None:intergenic 45.0%
TGGAGCTGCTTCTATAACTG+AGG - chr2.4:15920934-15920953 MS.gene92078:CDS 45.0%
TTACACGATCGCTCTGACAT+AGG - chr2.4:15920473-15920492 MS.gene92078:CDS 45.0%
TTGTTAGAGAGGCGGAGAAA+TGG + chr2.4:15919944-15919963 None:intergenic 45.0%
! CAGTTTCAAGCGTTGTTGCT+TGG - chr2.4:15920725-15920744 MS.gene92078:CDS 45.0%
! GGCTTAAGTGCTGCAAGAAA+TGG + chr2.4:15920770-15920789 None:intergenic 45.0%
!! AGGATTCAAACCTGGTTCTG+TGG - chr2.4:15920661-15920680 MS.gene92078:CDS 45.0%
AAGTGCCCCATAGCAAACCA+TGG + chr2.4:15919917-15919936 None:intergenic 50.0%
CCCTCTCATTGCTACATCCA+TGG - chr2.4:15920139-15920158 MS.gene92078:CDS 50.0%
GATGAATCAGGGAACCCTGA+AGG + chr2.4:15920380-15920399 None:intergenic 50.0%
GCAGCACTTAAGCCACCTAT+TGG - chr2.4:15920776-15920795 MS.gene92078:CDS 50.0%
GAATCAGGGAACCCTGAAGG+TGG + chr2.4:15920377-15920396 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 15919878 15921255 15919878 ID=MS.gene92078
chr2.4 mRNA 15919878 15921255 15919878 ID=MS.gene92078.t1;Parent=MS.gene92078
chr2.4 exon 15921156 15921255 15921156 ID=MS.gene92078.t1.exon1;Parent=MS.gene92078.t1
chr2.4 CDS 15921156 15921255 15921156 ID=cds.MS.gene92078.t1;Parent=MS.gene92078.t1
chr2.4 exon 15919878 15921058 15919878 ID=MS.gene92078.t1.exon2;Parent=MS.gene92078.t1
chr2.4 CDS 15919878 15921058 15919878 ID=cds.MS.gene92078.t1;Parent=MS.gene92078.t1
Gene Sequence

>MS.gene92078

ATGGATTCTCCTCCTCCTTTGCACATAGCAATGTTTCCATGGTTTGCTATGGGGCACTTAACTCCATTTCTCCGCCTCTCTAACAAATTAGCAATAAGAGGTCACAAAATCTCATTCTTCATCCCTGAAAAAAACACTCAACAAGTTACAATATCTCAATCTTCATCCAAATCTTATTACCTTTGTTCCTATCACAGTTCCTCATGTTAATGGTCTTCCTCATGATGCTGAAACTACTTCAGATGTACCCTCTTCTTTATTCCCTCTCATTGCTACATCCATGGACCAAACTGAGAAGGATATTGAACTTCTTCTAAGGGAACTAAAGCCACAAATAGTTTTCTTTGATTTTCAATATTGGCTGCCAAACTTGACTCAAAAACTTGGTATCAAAAGTCTTCAATACTTGATATGCAATCCAATATCATCAGCTTACCTTGGAAATATACCAAGACATAGTCAAGGAAGATTTTTAACTGAATTTGATCTCATGAAACCACCTTCAGGGTTCCCTGATTCATCCATCAAGTTTTATTCGCATGAAATTCGTGCCCTAGTTTCCCACAGAAAACTAGAATTTGGAAGTGGTGTTTTATTACACGATCGCTCTGACATAGGCACAAAGTTTTCAGATGCAGTTGCTTTCAAAGGATGCAGAGAAATTGATGGCTTATATGCTAATTATCTTCAAACTGTTTTTGGTAAACCTGTTCTGCTTTCAGGTCCTATATTACCTGAGCCACTAAAAGCTACATTAGAGGAAAAATGGTTAAAATGGCTTAAAGGATTCAAACCTGGTTCTGTGGTTTATTGTGCATATGGAAGTGAAGGTCCATTAGAAAAAAATCAGTTTCAAGCGTTGTTGCTTGGTCTTGAATTAACAGGTTTTCCATTTCTTGCAGCACTTAAGCCACCTATTGGATTTCAGACTATTGAAGAAGCTTTACCTGAAGGGTTTAATGAAAGAGTTAAAGGAAAAGGAATTGTTTATGGAAGTTGGATTCAACAACAATTGATTTTAGAACATCCTTCTGTTGGATGTTTCATAACACACTGTGGAGCTGCTTCTATAACTGAGGGACTTGTTAACACGTGTCAGTTGGTGTTCTTGCCACGTGTAGATCCTGACCATATCATGAATGCAAGAATGATGAGTGAAAAGATGAAGGTTGGTGTAGAAGTTGAGAAAGGTGATGAAGATGGATTGTTTACAAAAGAAAGTGTGAGCAAAGCTGTGAGAATTGTGATGGATGATGAGAATGAAGTTGGAAGAGAAGTGAGAGCTAATCATGCTAAACTGAGAAACTTTTTATTGAGAAGCAATTTAGAATCTTCATGTGTTGATAATTTCTGTCAAAAACTCTACGATTTGCTCTAG

Protein sequence

>MS.gene92078.t1

MDSPPPLHIAMFPWFAMGHLTPFLRLSNKLAIRVPHVNGLPHDAETTSDVPSSLFPLIATSMDQTEKDIELLLRELKPQIVFFDFQYWLPNLTQKLGIKSLQYLICNPISSAYLGNIPRHSQGRFLTEFDLMKPPSGFPDSSIKFYSHEIRALVSHRKLEFGSGVLLHDRSDIGTKFSDAVAFKGCREIDGLYANYLQTVFGKPVLLSGPILPEPLKATLEEKWLKWLKGFKPGSVVYCAYGSEGPLEKNQFQALLLGLELTGFPFLAALKPPIGFQTIEEALPEGFNERVKGKGIVYGSWIQQQLILEHPSVGCFITHCGAASITEGLVNTCQLVFLPRVDPDHIMNARMMSEKMKVGVEVEKGDEDGLFTKESVSKAVRIVMDDENEVGREVRANHAKLRNFLLRSNLESSCVDNFCQKLYDLL