AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene065249


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene065249.t1 MTR_2g083380 94.771 459 24 0 1 459 18 476 0.0 875
MS.gene065249.t1 MTR_2g083490 88.235 459 54 0 1 459 1 459 0.0 822
MS.gene065249.t1 MTR_2g083480 65.646 457 157 0 1 457 1 457 0.0 634
MS.gene065249.t1 MTR_2g083430 68.122 458 146 0 1 458 1 458 0.0 629
MS.gene065249.t1 MTR_4g079270 61.388 461 174 3 1 459 1 459 0.0 603
MS.gene065249.t1 MTR_4g079250 60.954 461 176 3 1 459 1 459 0.0 600
MS.gene065249.t1 MTR_2g083420 62.009 458 150 1 1 458 1 434 0.0 595
MS.gene065249.t1 MTR_2g083390 61.354 458 153 1 1 458 1 434 0.0 584
MS.gene065249.t1 MTR_2g014900 57.080 452 193 1 8 459 7 457 0.0 543
MS.gene065249.t1 MTR_2g086283 60.134 449 67 6 11 459 1 337 1.35e-167 475
MS.gene065249.t1 MTR_2g083360 49.558 452 123 4 7 458 28 374 2.62e-143 415
MS.gene065249.t1 MTR_1g090270 42.516 461 247 10 7 458 14 465 3.11e-125 372
MS.gene065249.t1 MTR_4g059370 42.593 324 173 6 142 458 75 392 1.26e-87 273
MS.gene065249.t1 MTR_8g068330 32.484 471 292 14 1 455 1 461 4.78e-70 230
MS.gene065249.t1 MTR_2g008225 31.897 464 295 9 2 454 9 462 6.27e-67 222
MS.gene065249.t1 MTR_8g068360 32.636 478 287 16 2 459 6 468 2.05e-64 215
MS.gene065249.t1 MTR_2g008220 32.403 466 290 11 2 454 8 461 2.23e-64 215
MS.gene065249.t1 MTR_7g067330 33.118 465 259 15 2 455 3 426 3.41e-64 213
MS.gene065249.t1 MTR_8g068340 31.760 466 300 12 2 455 6 465 7.10e-64 214
MS.gene065249.t1 MTR_4g123553 32.484 471 272 17 7 456 14 459 6.59e-63 211
MS.gene065249.t1 MTR_4g079280 45.614 228 79 2 11 238 1 183 1.54e-62 201
MS.gene065249.t1 MTR_2g008226 33.962 477 269 21 7 455 9 467 5.64e-62 209
MS.gene065249.t1 MTR_7g067120 33.045 463 256 16 2 452 3 423 2.34e-61 206
MS.gene065249.t1 MTR_6g042310 31.760 466 286 13 6 457 16 463 8.72e-61 206
MS.gene065249.t1 MTR_6g036650 30.992 484 281 12 1 456 11 469 1.53e-59 202
MS.gene065249.t1 MTR_2g046620 30.917 469 282 15 7 456 15 460 1.67e-59 202
MS.gene065249.t1 MTR_2g014930 40.138 289 93 5 17 305 9 217 9.19e-56 185
MS.gene065249.t1 MTR_8g007650 30.720 472 300 12 6 459 5 467 6.44e-55 190
MS.gene065249.t1 MTR_8g007565 30.508 472 301 12 6 459 5 467 6.16e-54 187
MS.gene065249.t1 MTR_4g077960 30.736 462 272 15 17 456 1 436 1.33e-53 186
MS.gene065249.t1 MTR_5g066410 30.638 470 278 12 11 459 1 443 1.15e-52 183
MS.gene065249.t1 MTR_1g090280 43.478 184 99 3 279 458 133 315 4.18e-47 165
MS.gene065249.t1 MTR_3g435310 29.231 455 264 13 7 456 17 418 3.89e-46 166
MS.gene065249.t1 MTR_2g083440 56.863 102 44 0 357 458 11 112 1.26e-36 130
MS.gene065249.t1 MTR_8g071070 26.819 481 315 14 3 457 2 471 5.72e-35 136
MS.gene065249.t1 MTR_8g066610 25.558 493 318 16 1 457 1 480 8.46e-33 130
MS.gene065249.t1 MTR_4g031800 26.190 462 286 16 7 434 8 448 1.74e-30 123
MS.gene065249.t1 MTR_1g062380 26.464 461 273 17 5 418 13 454 2.38e-30 123
MS.gene065249.t1 MTR_7g070660 25.684 475 283 15 3 433 6 454 3.11e-30 123
MS.gene065249.t1 MTR_8g009073 28.850 461 272 20 6 434 4 440 6.44e-30 121
MS.gene065249.t1 MTR_2g098430 24.625 467 297 13 9 439 7 454 1.60e-29 120
MS.gene065249.t1 MTR_8g009055 25.702 463 296 15 6 439 4 447 2.80e-29 120
MS.gene065249.t1 MTR_0009s0240 25.466 483 304 16 3 458 2 455 3.36e-29 119
MS.gene065249.t1 MTR_8g009050 26.623 462 283 17 6 434 4 442 1.59e-28 117
MS.gene065249.t1 MTR_5g087620 26.124 467 292 18 8 433 10 464 2.59e-28 117
MS.gene065249.t1 MTR_8g009073 33.730 252 147 9 198 434 65 311 2.76e-28 115
MS.gene065249.t1 MTR_6g038240 26.667 450 281 17 8 436 11 432 4.82e-28 116
MS.gene065249.t1 MTR_5g045970 26.458 480 293 16 1 436 7 470 7.43e-28 116
MS.gene065249.t1 MTR_7g070810 25.901 444 288 13 7 421 8 439 1.74e-27 115
MS.gene065249.t1 MTR_8g466240 26.186 485 301 20 1 457 1 456 1.97e-27 114
MS.gene065249.t1 MTR_6g038220 25.386 453 282 16 8 436 11 431 1.99e-27 114
MS.gene065249.t1 MTR_7g013180 26.402 428 280 15 8 419 5 413 2.33e-27 114
MS.gene065249.t1 MTR_7g013200 25.546 458 274 16 8 437 5 423 3.92e-27 113
MS.gene065249.t1 MTR_3g009510 33.790 219 122 6 236 436 241 454 4.21e-27 114
MS.gene065249.t1 MTR_8g006730 24.115 452 301 14 8 431 6 443 8.83e-27 112
MS.gene065249.t1 MTR_8g006710 25.893 448 287 16 9 427 7 438 2.31e-26 111
MS.gene065249.t1 MTR_7g013220 24.249 466 285 16 8 439 5 436 2.95e-26 110
MS.gene065249.t1 MTR_7g070740 24.160 476 293 15 3 433 6 458 5.39e-26 110
MS.gene065249.t1 MTR_8g008990 25.106 470 292 17 6 439 4 449 5.83e-26 110
MS.gene065249.t1 MTR_7g070940 24.190 463 305 14 1 433 1 447 7.58e-26 110
MS.gene065249.t1 MTR_6g038200 26.419 458 272 20 8 436 11 432 1.45e-25 108
MS.gene065249.t1 MTR_6g038230 26.535 456 274 19 8 436 11 432 1.69e-25 108
MS.gene065249.t1 MTR_4g485590 28.537 410 233 16 8 394 9 381 1.72e-25 108
MS.gene065249.t1 MTR_8g009067 32.099 243 146 7 207 434 84 322 2.53e-25 107
MS.gene065249.t1 MTR_6g035265 25.155 485 275 18 1 434 6 453 2.80e-25 108
MS.gene065249.t1 MTR_8g012635 28.529 340 201 11 123 435 124 448 3.39e-25 108
MS.gene065249.t1 MTR_8g009067 32.099 243 146 7 207 434 202 440 3.75e-25 108
MS.gene065249.t1 MTR_7g070610 24.628 471 294 15 5 433 10 461 4.90e-25 107
MS.gene065249.t1 MTR_8g009063 25.591 465 285 17 6 436 11 448 5.22e-25 107
MS.gene065249.t1 MTR_4g485620 24.609 447 292 13 20 436 1 432 5.63e-25 107
MS.gene065249.t1 MTR_6g488280 25.000 440 300 13 9 427 7 437 5.69e-25 107
MS.gene065249.t1 MTR_0428s0010 25.000 440 300 13 9 427 7 437 5.69e-25 107
MS.gene065249.t1 MTR_4g117950 24.385 488 289 15 1 437 1 459 6.52e-25 107
MS.gene065249.t1 MTR_0078s0010 26.724 464 279 16 6 434 4 441 6.80e-25 107
MS.gene065249.t1 MTR_6g033615 34.884 172 106 4 258 427 252 419 7.32e-25 107
MS.gene065249.t1 MTR_7g117405 27.983 461 286 20 8 436 12 458 7.73e-25 107
MS.gene065249.t1 MTR_4g024020 26.383 470 291 16 7 436 8 462 9.86e-25 107
MS.gene065249.t1 MTR_6g023665 28.992 238 155 4 203 427 208 444 1.02e-24 106
MS.gene065249.t1 MTR_8g077590 28.955 335 193 8 112 427 115 423 1.45e-24 106
MS.gene065249.t1 MTR_8g012650 27.647 340 204 11 123 435 124 448 2.44e-24 105
MS.gene065249.t1 MTR_7g070870 24.775 444 282 13 4 410 15 443 3.22e-24 105
MS.gene065249.t1 MTR_7g102450 26.144 459 289 17 8 436 11 449 3.28e-24 105
MS.gene065249.t1 MTR_6g033725 36.313 179 108 4 258 434 263 437 3.77e-24 105
MS.gene065249.t1 MTR_2g059240 25.899 417 265 10 8 397 13 412 3.77e-24 105
MS.gene065249.t1 MTR_7g071040 24.580 476 292 18 3 433 12 465 4.10e-24 105
MS.gene065249.t1 MTR_0078s0060 26.180 466 280 17 6 435 4 441 4.21e-24 105
MS.gene065249.t1 MTR_5g035580 25.546 458 276 18 5 433 10 431 4.25e-24 104
MS.gene065249.t1 MTR_5g035560 24.843 479 296 19 5 454 8 451 6.02e-24 104
MS.gene065249.t1 MTR_6g033625 30.364 247 150 8 199 427 191 433 6.54e-24 104
MS.gene065249.t1 MTR_8g006270 30.400 250 155 6 206 437 198 446 7.44e-24 104
MS.gene065249.t1 MTR_0184s0040 32.806 253 144 10 206 439 216 461 1.41e-23 103
MS.gene065249.t1 MTR_0078s0190 32.806 253 144 10 206 439 216 461 1.41e-23 103
MS.gene065249.t1 MTR_7g055710 24.034 466 306 13 3 433 6 458 1.57e-23 103
MS.gene065249.t1 MTR_0536s0010 25.000 460 271 18 1 421 16 440 1.65e-23 103
MS.gene065249.t1 MTR_7g070930 23.319 476 308 13 1 433 1 462 1.94e-23 103
MS.gene065249.t1 MTR_8g027885 25.664 452 298 16 9 439 19 453 1.99e-23 103
MS.gene065249.t1 MTR_8g083280 24.837 459 287 18 9 436 8 439 2.24e-23 102
MS.gene065249.t1 MTR_7g117170 32.609 230 131 7 223 434 228 451 2.62e-23 102
MS.gene065249.t1 MTR_6g038300 24.946 461 276 18 8 436 11 433 2.66e-23 102
MS.gene065249.t1 MTR_7g046490 31.687 243 144 8 209 435 204 440 2.93e-23 102
MS.gene065249.t1 MTR_1g019510 24.675 462 299 16 6 439 4 444 4.02e-23 102
MS.gene065249.t1 MTR_7g047030 26.407 462 279 17 8 434 6 441 5.05e-23 101
MS.gene065249.t1 MTR_7g047270 26.407 462 279 17 8 434 6 441 5.05e-23 101
MS.gene065249.t1 MTR_8g027870 24.558 452 303 13 9 439 19 453 5.79e-23 101
MS.gene065249.t1 MTR_8g465670 24.444 450 305 13 9 434 8 446 5.87e-23 101
MS.gene065249.t1 MTR_4g117960 25.764 458 284 17 1 421 6 444 6.61e-23 101
MS.gene065249.t1 MTR_7g102560 25.577 477 285 16 7 436 8 461 8.13e-23 101
MS.gene065249.t1 MTR_2g034990 24.622 463 297 17 7 438 10 451 1.01e-22 100
MS.gene065249.t1 MTR_4g117980 24.078 461 292 18 7 428 10 451 1.07e-22 100
MS.gene065249.t1 MTR_8g012730 34.031 191 108 4 259 435 99 285 1.47e-22 98.2
MS.gene065249.t1 MTR_1g107350 24.138 464 302 16 1 434 1 444 1.85e-22 100
MS.gene065249.t1 MTR_7g070800 24.464 466 297 16 5 433 3 450 2.07e-22 100
MS.gene065249.t1 MTR_4g485630 26.471 476 258 20 7 429 8 444 2.66e-22 99.8
MS.gene065249.t1 MTR_7g102550 26.237 465 288 19 8 432 9 458 2.89e-22 99.8
MS.gene065249.t1 MTR_0184s0030 31.132 212 127 6 231 425 228 437 3.27e-22 99.4
MS.gene065249.t1 MTR_6g033675 27.381 336 218 12 113 434 117 440 3.73e-22 99.4
MS.gene065249.t1 MTR_4g485640 30.709 254 151 7 199 428 388 640 4.06e-22 99.8
MS.gene065249.t1 MTR_6g033660 35.393 178 109 4 259 434 266 439 4.42e-22 99.0
MS.gene065249.t1 MTR_8g008970 26.247 461 284 17 6 434 4 440 5.06e-22 99.8
MS.gene065249.t1 MTR_8g008970 28.814 236 149 8 207 436 541 763 5.81e-15 77.8
MS.gene065249.t1 MTR_3g009490 34.132 167 94 4 283 436 3 166 5.99e-22 93.6
MS.gene065249.t1 MTR_5g039900 24.301 465 300 15 5 433 10 458 6.63e-22 98.6
MS.gene065249.t1 MTR_1g107315 25.682 440 283 14 1 412 1 424 7.05e-22 98.6
MS.gene065249.t1 MTR_7g070780 23.454 469 305 14 3 433 6 458 8.23e-22 98.2
MS.gene065249.t1 MTR_6g005600 27.545 334 206 10 123 434 124 443 1.81e-21 97.1
MS.gene065249.t1 MTR_8g006220 24.070 457 306 12 9 434 7 453 1.90e-21 97.1
MS.gene065249.t1 MTR_5g027210 26.104 249 151 3 212 428 212 459 2.12e-21 97.1
MS.gene065249.t1 MTR_1g019520 31.606 193 117 4 258 439 5 193 2.58e-21 92.4
MS.gene065249.t1 MTR_2g046820 34.112 214 127 6 236 438 236 446 2.66e-21 96.7
MS.gene065249.t1 MTR_8g012745 31.944 216 125 7 237 436 237 446 3.64e-21 96.3
MS.gene065249.t1 MTR_7g102490 24.468 470 299 15 7 436 8 461 4.03e-21 96.3
MS.gene065249.t1 MTR_3g049970 23.881 469 293 13 3 434 4 445 4.41e-21 95.9
MS.gene065249.t1 MTR_7g102460 26.004 473 286 20 7 436 8 459 4.84e-21 95.9
MS.gene065249.t1 MTR_7g070910 23.800 479 292 18 3 433 6 459 5.04e-21 95.9
MS.gene065249.t1 MTR_1g032490 25.000 448 274 17 2 412 4 426 5.10e-21 95.9
MS.gene065249.t1 MTR_8g032950 23.799 458 293 18 7 427 11 449 6.75e-21 95.5
MS.gene065249.t1 MTR_8g074550 24.646 495 281 16 1 434 1 464 6.76e-21 95.5
MS.gene065249.t1 MTR_6g035185 23.779 471 302 16 1 433 6 457 7.86e-21 95.5
MS.gene065249.t1 MTR_8g012630 32.461 191 111 4 259 435 206 392 8.78e-21 94.7
MS.gene065249.t1 MTR_8g006260 24.123 456 291 17 8 427 6 442 1.34e-20 94.7
MS.gene065249.t1 MTR_7g102520 33.511 188 113 5 259 436 281 466 2.15e-20 94.0
MS.gene065249.t1 MTR_8g044140 25.055 455 282 14 46 454 19 460 2.52e-20 93.6
MS.gene065249.t1 MTR_7g013240 22.685 432 284 13 8 420 6 406 2.78e-20 93.2
MS.gene065249.t1 MTR_2g035020 24.161 447 296 15 7 421 10 445 3.33e-20 93.6
MS.gene065249.t1 MTR_4g108250 23.480 477 306 16 1 433 1 462 3.92e-20 93.2
MS.gene065249.t1 MTR_3g079480 24.183 459 287 16 8 427 21 457 4.48e-20 93.2
MS.gene065249.t1 MTR_7g013260 23.678 435 277 16 8 420 6 407 5.90e-20 92.4
MS.gene065249.t1 MTR_5g098930 23.605 466 304 13 7 438 4 451 6.12e-20 92.4
MS.gene065249.t1 MTR_3g069690 27.309 249 160 7 199 434 185 425 6.63e-20 92.4
MS.gene065249.t1 MTR_3g479520 23.974 463 283 17 8 427 15 451 6.95e-20 92.4
MS.gene065249.t1 MTR_2g046750 33.796 216 129 7 236 440 239 451 7.54e-20 92.0
MS.gene065249.t1 MTR_5g016660 23.110 463 287 15 12 427 14 454 7.57e-20 92.4
MS.gene065249.t1 MTR_0536s0020 31.122 196 116 6 258 435 266 460 8.85e-20 92.0
MS.gene065249.t1 MTR_4g117890 30.387 181 106 5 258 421 261 438 9.06e-20 92.0
MS.gene065249.t1 MTR_5g067170 31.522 184 109 5 258 425 267 449 1.13e-19 91.7
MS.gene065249.t1 MTR_2g040530 32.105 190 117 4 259 438 261 448 1.24e-19 91.7
MS.gene065249.t1 MTR_5g040030 25.691 362 221 11 104 433 117 462 1.26e-19 91.7
MS.gene065249.t1 MTR_5g019580 30.594 219 127 5 239 433 262 479 1.58e-19 91.7
MS.gene065249.t1 MTR_5g019580 30.594 219 127 5 239 433 238 455 1.70e-19 91.3
MS.gene065249.t1 MTR_5g045960 25.306 490 273 19 6 436 7 462 1.71e-19 91.3
MS.gene065249.t1 MTR_8g088560 31.225 253 142 9 204 438 199 437 2.39e-19 90.5
MS.gene065249.t1 MTR_2g035040 30.899 178 108 4 258 421 174 350 4.38e-19 89.4
MS.gene065249.t1 MTR_5g029800 30.806 211 114 7 258 437 265 474 4.64e-19 90.1
MS.gene065249.t1 MTR_7g080950 32.620 187 115 6 253 439 253 428 5.51e-19 89.4
MS.gene065249.t1 MTR_8g064880 25.219 456 275 16 3 416 4 435 6.18e-19 89.7
MS.gene065249.t1 MTR_5g090610 27.046 281 179 7 199 455 183 461 6.72e-19 89.4
MS.gene065249.t1 MTR_8g090095 28.016 257 167 7 197 438 206 459 1.01e-18 89.0
MS.gene065249.t1 MTR_5g098960 31.683 202 119 8 259 456 262 448 1.09e-18 88.6
MS.gene065249.t1 MTR_8g083290 33.520 179 112 5 259 436 269 441 1.17e-18 88.6
MS.gene065249.t1 MTR_5g072860 23.060 451 300 14 8 436 18 443 1.36e-18 88.6
MS.gene065249.t1 MTR_8g064870 24.888 446 281 13 5 416 8 433 1.62e-18 88.2
MS.gene065249.t1 MTR_4g128690 25.986 431 284 15 1 419 8 415 2.17e-18 87.8
MS.gene065249.t1 MTR_7g012120 30.811 185 112 5 259 428 272 455 2.34e-18 87.8
MS.gene065249.t1 MTR_5g090660 27.413 259 162 7 204 438 200 456 3.25e-18 87.8
MS.gene065249.t1 MTR_4g118000 23.853 436 277 16 12 417 16 426 3.56e-18 87.0
MS.gene065249.t1 MTR_5g090630 24.359 468 294 17 8 438 5 449 4.23e-18 87.0
MS.gene065249.t1 MTR_4g094920 30.811 185 119 6 259 437 281 462 5.75e-18 86.7
MS.gene065249.t1 MTR_5g075440 27.500 240 145 6 215 440 213 437 7.89e-18 85.9
MS.gene065249.t1 MTR_6g035295 23.297 455 296 16 6 422 10 449 1.04e-17 85.9
MS.gene065249.t1 MTR_7g470610 32.738 168 106 5 253 418 128 290 1.64e-17 83.2
MS.gene065249.t1 MTR_7g070583 32.738 168 106 5 253 418 128 290 1.64e-17 83.2
MS.gene065249.t1 MTR_7g080940 29.570 186 120 5 253 438 258 432 1.76e-17 85.1
MS.gene065249.t1 MTR_4g095008 31.902 163 104 5 259 417 266 425 1.96e-17 85.1
MS.gene065249.t1 MTR_3g069710 28.205 273 165 10 202 457 196 454 2.40e-17 84.7
MS.gene065249.t1 MTR_7g070860 23.377 462 289 15 7 433 6 437 2.63e-17 84.3
MS.gene065249.t1 MTR_7g080935 29.032 186 121 5 253 438 258 432 3.00e-17 84.3
MS.gene065249.t1 MTR_5g072810 24.161 447 290 16 8 434 12 429 3.00e-17 84.3
MS.gene065249.t1 MTR_6g014170 30.435 184 114 6 253 434 266 437 8.15e-17 82.8
MS.gene065249.t1 MTR_1g040310 21.951 451 301 12 1 416 8 442 1.03e-16 82.8
MS.gene065249.t1 MTR_0891s0010 27.094 203 134 6 259 458 99 290 1.07e-16 80.9
MS.gene065249.t1 MTR_4g008630 27.386 241 160 6 209 437 204 441 1.69e-16 82.0
MS.gene065249.t1 MTR_3g084540 22.601 469 300 16 8 436 6 451 1.78e-16 82.0
MS.gene065249.t1 MTR_5g090580 26.132 287 180 7 199 458 197 478 2.94e-16 81.3
MS.gene065249.t1 MTR_4g082810 33.758 157 95 3 236 384 240 395 3.53e-16 80.5
MS.gene065249.t1 MTR_6g014020 30.337 178 110 6 253 426 284 451 3.82e-16 80.9
MS.gene065249.t1 MTR_5g004940 28.796 191 122 4 253 434 193 378 3.97e-16 80.5
MS.gene065249.t1 MTR_5g090700 27.652 264 165 8 199 438 199 460 4.05e-16 80.9
MS.gene065249.t1 MTR_6g014200 29.891 184 115 6 253 434 281 452 5.79e-16 80.5
MS.gene065249.t1 MTR_1g029540 26.939 245 157 7 209 437 200 438 6.68e-16 80.1
MS.gene065249.t1 MTR_1g107380 28.169 213 133 8 220 419 230 435 7.03e-16 80.1
MS.gene065249.t1 MTR_5g072830 23.767 446 290 15 8 434 10 424 8.61e-16 79.7
MS.gene065249.t1 MTR_3g479490 28.994 169 111 4 259 427 283 442 8.75e-16 79.7
MS.gene065249.t1 MTR_1g107365 27.536 207 125 6 219 412 253 447 8.88e-16 79.7
MS.gene065249.t1 MTR_3g084520 28.708 209 127 7 259 451 272 474 9.97e-16 79.7
MS.gene065249.t1 MTR_3g479610 29.586 169 110 4 259 427 122 281 1.12e-15 78.2
MS.gene065249.t1 MTR_5g016480 29.412 170 114 5 259 427 275 439 1.76e-15 79.0
MS.gene065249.t1 MTR_3g031400 22.198 455 296 16 3 436 10 427 1.81e-15 79.0
MS.gene065249.t1 MTR_3g031450 22.273 440 285 15 8 427 18 420 2.04e-15 78.6
MS.gene065249.t1 MTR_6g078320 26.160 474 276 18 8 428 11 463 2.11e-15 78.6
MS.gene065249.t1 MTR_6g013440 26.587 252 155 10 199 434 219 456 2.18e-15 78.6
MS.gene065249.t1 MTR_6g013920 26.939 245 149 10 199 427 217 447 2.43e-15 78.6
MS.gene065249.t1 MTR_4g082820 36.420 162 88 5 259 406 264 424 5.04e-15 77.4
MS.gene065249.t1 MTR_3g084530 28.796 191 123 5 253 436 266 450 6.90e-15 77.0
MS.gene065249.t1 MTR_4g064987 23.810 462 268 22 1 425 1 415 7.73e-15 76.6
MS.gene065249.t1 MTR_1g107360 25.296 253 163 7 219 456 222 463 9.18e-15 76.6
MS.gene065249.t1 MTR_0036s0220 23.241 469 300 20 8 439 12 457 1.09e-14 76.3
MS.gene065249.t1 MTR_6g013900 28.814 177 112 6 253 427 283 447 1.14e-14 76.3
MS.gene065249.t1 MTR_7g039550 29.018 224 134 6 220 421 5 225 1.36e-14 74.3
MS.gene065249.t1 MTR_6g014220 27.717 184 119 6 253 434 282 453 1.51e-14 75.9
MS.gene065249.t1 MTR_8g007585 29.213 178 112 6 259 434 202 367 1.82e-14 75.5
MS.gene065249.t1 MTR_4g064987 23.441 465 272 21 1 425 1 421 3.62e-14 74.7
MS.gene065249.t1 MTR_8g009840 26.368 201 132 3 273 459 332 530 5.17e-14 74.3
MS.gene065249.t1 MTR_1g107375 29.688 192 114 5 220 399 215 397 5.86e-14 73.9
MS.gene065249.t1 MTR_3g008010 28.235 170 109 6 259 425 288 447 6.00e-14 74.3
MS.gene065249.t1 MTR_6g014187 28.261 184 118 6 253 434 284 455 8.73e-14 73.6
MS.gene065249.t1 MTR_6g014250 26.344 186 123 6 253 436 282 455 1.01e-13 73.6
MS.gene065249.t1 MTR_6g014310 25.833 240 150 9 210 434 230 456 1.33e-13 73.2
MS.gene065249.t1 MTR_2g008210 29.412 170 111 5 259 427 284 445 1.71e-13 72.8
MS.gene065249.t1 MTR_6g014190 26.776 183 123 5 253 429 91 268 2.05e-13 71.2
MS.gene065249.t1 MTR_8g056740 26.009 223 147 5 220 430 121 337 2.58e-13 71.6
MS.gene065249.t1 MTR_4g094220 24.248 499 263 26 4 434 3 454 2.70e-13 72.0
MS.gene065249.t1 MTR_7g080900 23.965 459 292 18 3 436 7 433 4.67e-13 71.2
MS.gene065249.t1 MTR_6g014270 27.174 184 120 6 253 434 283 454 6.10e-13 70.9
MS.gene065249.t1 MTR_6g014290 29.167 144 95 4 253 394 282 420 1.18e-12 70.1
MS.gene065249.t1 MTR_6g014150 27.219 169 111 5 253 419 281 439 1.93e-12 69.3
MS.gene065249.t1 MTR_0536s0030 30.935 139 82 4 309 434 194 331 1.17e-11 66.6
MS.gene065249.t1 MTR_6g013960 30.282 142 96 3 253 394 284 422 1.88e-11 66.2
MS.gene065249.t1 MTR_5g072850 28.497 193 117 6 215 398 162 342 5.02e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene065249.t1 AT5G54010 48.465 456 224 5 5 459 3 448 2.04e-155 449
MS.gene065249.t1 AT5G53990 47.380 458 216 7 6 458 4 441 4.13e-151 437
MS.gene065249.t1 AT4G27570 46.593 455 225 6 8 458 7 447 2.03e-147 428
MS.gene065249.t1 AT1G64910 46.476 454 226 6 6 458 4 441 6.90e-147 427
MS.gene065249.t1 AT5G54060 47.289 461 234 6 5 459 10 467 1.39e-146 427
MS.gene065249.t1 AT4G27560 46.154 455 227 6 8 458 7 447 2.54e-145 423
MS.gene065249.t1 AT2G22930 47.149 456 216 7 6 456 4 439 5.42e-144 419
MS.gene065249.t1 AT1G64920 46.623 459 220 8 7 458 5 445 3.22e-143 417
MS.gene065249.t1 AT4G09500 45.495 455 223 8 7 456 5 439 9.08e-140 408
MS.gene065249.t1 AT3G29630 44.150 453 235 4 5 454 3 440 4.37e-138 404
MS.gene065249.t1 AT1G50580 43.833 454 235 5 5 455 3 439 1.77e-133 392
MS.gene065249.t1 AT3G29630 43.333 450 217 5 5 454 3 414 6.14e-130 382
MS.gene065249.t1 AT4G09500 43.709 453 207 9 8 456 6 414 4.06e-127 375
MS.gene065249.t1 AT5G49690 34.423 459 276 11 7 455 9 452 5.96e-73 237
MS.gene065249.t1 AT2G22590 34.557 463 282 14 5 454 12 466 1.06e-69 229
MS.gene065249.t1 AT5G65550 32.903 465 282 18 7 454 8 459 1.67e-64 215
MS.gene065249.t1 AT2G22930 42.975 242 113 5 6 240 4 227 2.43e-58 194
MS.gene065249.t1 AT2G22930 41.237 97 53 2 363 456 192 287 4.28e-16 79.0
MS.gene065249.t1 AT5G03490 27.397 438 288 11 8 434 19 437 2.06e-37 142
MS.gene065249.t1 AT1G51210 26.517 445 276 13 8 433 20 432 1.42e-34 134
MS.gene065249.t1 AT2G15490 27.632 456 287 15 7 428 6 452 6.54e-33 130
MS.gene065249.t1 AT2G15490 27.373 453 289 14 7 428 6 449 7.68e-33 130
MS.gene065249.t1 AT5G12890 27.079 469 291 17 4 437 6 458 8.10e-33 130
MS.gene065249.t1 AT2G36770 28.540 459 280 16 7 427 13 461 1.15e-32 130
MS.gene065249.t1 AT1G73880 26.179 424 268 14 2 399 8 412 3.34e-32 128
MS.gene065249.t1 AT2G36750 29.004 462 287 16 7 436 9 461 3.62e-32 128
MS.gene065249.t1 AT4G34138 27.163 497 289 14 5 456 8 476 3.71e-32 128
MS.gene065249.t1 AT1G05675 27.660 470 254 19 8 436 6 430 5.60e-32 127
MS.gene065249.t1 AT2G15480 27.974 454 280 17 7 426 9 449 1.12e-31 127
MS.gene065249.t1 AT2G31790 27.571 457 273 17 8 436 8 434 1.89e-31 125
MS.gene065249.t1 AT1G05680 27.527 465 261 19 8 436 6 430 2.21e-31 125
MS.gene065249.t1 AT2G15480 27.740 447 277 16 7 419 9 443 4.73e-31 125
MS.gene065249.t1 AT2G36780 29.039 458 281 16 6 427 12 461 3.92e-30 122
MS.gene065249.t1 AT4G34131 26.452 465 299 17 2 436 4 455 9.03e-30 121
MS.gene065249.t1 AT2G16890 28.477 453 269 20 8 429 9 437 1.74e-29 120
MS.gene065249.t1 AT4G34135 26.637 443 281 15 7 416 10 441 3.01e-29 120
MS.gene065249.t1 AT3G50740 26.987 478 288 18 8 449 7 459 1.99e-28 117
MS.gene065249.t1 AT2G18570 24.295 461 303 13 1 434 1 442 1.51e-27 115
MS.gene065249.t1 AT4G36770 26.709 468 274 18 7 435 3 440 2.25e-27 114
MS.gene065249.t1 AT2G16890 28.440 436 259 19 8 412 9 422 3.85e-27 113
MS.gene065249.t1 AT2G36800 27.371 464 292 18 5 431 9 464 9.07e-27 113
MS.gene065249.t1 AT2G36760 28.294 463 290 17 7 436 13 466 9.67e-27 112
MS.gene065249.t1 AT1G10400 26.522 460 268 19 7 429 6 432 3.82e-26 110
MS.gene065249.t1 AT2G31750 25.696 467 275 19 1 433 1 429 1.30e-25 109
MS.gene065249.t1 AT2G31750 25.696 467 275 19 1 433 1 429 2.26e-25 108
MS.gene065249.t1 AT2G18560 28.968 252 162 5 199 434 102 352 5.46e-25 106
MS.gene065249.t1 AT3G53160 25.726 482 303 20 1 443 1 466 1.46e-24 106
MS.gene065249.t1 AT2G43820 25.541 462 271 18 8 438 7 426 3.13e-24 105
MS.gene065249.t1 AT5G14860 25.758 462 293 17 1 429 1 445 3.85e-24 105
MS.gene065249.t1 AT3G53150 24.681 470 308 13 7 436 21 484 2.24e-23 103
MS.gene065249.t1 AT5G59590 25.581 473 294 20 8 458 10 446 5.10e-23 101
MS.gene065249.t1 AT5G59580 24.731 465 308 17 8 455 9 448 6.17e-23 101
MS.gene065249.t1 AT1G01420 24.742 485 291 20 8 453 11 460 1.40e-22 100
MS.gene065249.t1 AT1G01420 24.742 485 291 20 8 453 8 457 1.58e-22 100
MS.gene065249.t1 AT2G29730 33.040 227 135 7 210 425 212 432 2.94e-22 99.4
MS.gene065249.t1 AT2G30150 22.360 483 304 17 8 458 13 456 7.72e-22 98.2
MS.gene065249.t1 AT2G30140 23.230 452 270 15 8 427 13 419 1.38e-21 97.4
MS.gene065249.t1 AT4G14090 25.216 464 279 19 9 443 16 440 1.52e-21 97.4
MS.gene065249.t1 AT5G38040 25.214 468 285 19 16 454 18 449 2.14e-21 96.7
MS.gene065249.t1 AT2G30140 23.568 454 267 15 8 427 13 420 2.29e-21 96.7
MS.gene065249.t1 AT2G43840 24.946 461 275 16 8 438 7 426 2.60e-21 96.7
MS.gene065249.t1 AT2G28080 21.915 470 324 16 12 454 22 475 2.64e-21 96.7
MS.gene065249.t1 AT2G43840 24.675 462 275 16 8 438 7 426 3.87e-21 95.9
MS.gene065249.t1 AT4G15480 24.619 459 301 16 3 434 14 454 5.37e-21 95.9
MS.gene065249.t1 AT1G06000 22.837 416 251 10 8 399 10 379 1.75e-20 94.0
MS.gene065249.t1 AT2G30150 22.385 478 300 17 13 458 2 440 1.79e-20 94.0
MS.gene065249.t1 AT5G26310 23.195 457 301 15 8 435 7 442 3.96e-20 93.2
MS.gene065249.t1 AT4G15550 24.295 461 307 17 2 436 7 451 4.01e-20 93.2
MS.gene065249.t1 AT1G01390 24.286 490 292 19 1 444 1 457 5.58e-20 92.8
MS.gene065249.t1 AT2G36970 26.667 240 163 6 202 437 219 449 5.79e-20 92.8
MS.gene065249.t1 AT1G01390 24.286 490 292 19 1 444 18 474 5.86e-20 92.8
MS.gene065249.t1 AT1G05560 23.868 486 305 19 3 454 2 456 1.42e-19 91.3
MS.gene065249.t1 AT1G07250 29.032 248 163 7 220 456 229 474 1.45e-19 91.7
MS.gene065249.t1 AT1G05560 23.868 486 305 19 3 454 52 506 2.95e-19 90.9
MS.gene065249.t1 AT1G07260 30.568 229 147 6 236 454 245 471 3.08e-19 90.5
MS.gene065249.t1 AT5G05880 22.436 468 309 16 1 437 1 445 1.19e-18 88.6
MS.gene065249.t1 AT5G66690 28.512 242 150 6 236 459 233 469 1.35e-18 88.6
MS.gene065249.t1 AT4G01070 29.947 187 116 5 259 434 261 443 2.29e-18 87.8
MS.gene065249.t1 AT1G05530 23.779 471 274 19 8 436 5 432 2.30e-18 87.8
MS.gene065249.t1 AT3G21560 24.736 473 274 19 8 434 12 448 5.49e-18 86.7
MS.gene065249.t1 AT3G16520 29.949 197 119 5 258 437 262 456 5.91e-18 86.7
MS.gene065249.t1 AT2G29710 31.754 211 123 7 228 425 230 432 1.19e-17 85.5
MS.gene065249.t1 AT3G46670 22.899 476 320 19 2 457 3 451 1.24e-17 85.5
MS.gene065249.t1 AT4G15280 29.389 262 154 7 207 439 231 490 1.24e-17 85.9
MS.gene065249.t1 AT3G16520 30.909 165 108 3 258 418 262 424 1.38e-17 85.1
MS.gene065249.t1 AT3G16520 30.909 165 108 3 258 418 262 424 1.50e-17 85.1
MS.gene065249.t1 AT4G15280 29.389 262 154 7 207 439 199 458 1.74e-17 85.1
MS.gene065249.t1 AT2G36790 37.363 182 100 6 259 427 280 460 2.12e-17 85.1
MS.gene065249.t1 AT5G05890 26.848 257 167 9 199 437 196 449 2.55e-17 84.3
MS.gene065249.t1 AT1G24100 22.294 462 294 19 8 438 11 438 2.56e-17 84.3
MS.gene065249.t1 AT5G05860 24.215 446 292 16 7 435 8 424 3.10e-17 84.3
MS.gene065249.t1 AT3G11340 27.155 232 152 7 203 427 192 413 3.44e-17 84.0
MS.gene065249.t1 AT4G15500 23.128 454 313 15 1 434 1 438 7.22e-17 83.2
MS.gene065249.t1 AT3G46690 23.288 438 289 15 8 425 9 419 7.96e-17 82.8
MS.gene065249.t1 AT1G78270 23.176 466 300 17 8 436 13 457 9.25e-17 82.8
MS.gene065249.t1 AT3G21760 28.426 197 123 4 259 439 271 465 1.03e-16 82.8
MS.gene065249.t1 AT4G15260 28.141 199 122 5 259 439 144 339 1.07e-16 81.6
MS.gene065249.t1 AT1G22360 32.022 178 111 5 259 436 287 454 1.24e-16 82.4
MS.gene065249.t1 AT3G21790 27.230 213 136 4 259 454 268 478 3.72e-16 81.3
MS.gene065249.t1 AT3G21800 29.319 191 116 4 259 432 265 453 4.03e-16 80.9
MS.gene065249.t1 AT3G46700 23.517 472 303 19 8 459 9 442 4.03e-16 80.9
MS.gene065249.t1 AT2G29750 31.892 185 116 6 241 417 255 437 4.19e-16 80.9
MS.gene065249.t1 AT2G29740 30.000 200 130 5 236 427 250 447 4.64e-16 80.9
MS.gene065249.t1 AT3G21750 28.643 199 122 4 259 439 257 453 4.39e-15 77.8
MS.gene065249.t1 AT5G38010 27.823 248 154 9 210 449 209 439 4.40e-15 77.8
MS.gene065249.t1 AT3G02100 22.998 487 296 19 8 458 13 456 8.88e-15 76.6
MS.gene065249.t1 AT1G22400 31.953 169 105 5 259 427 291 449 9.75e-15 76.6
MS.gene065249.t1 AT2G26480 21.459 466 290 21 8 444 8 426 1.10e-14 76.3
MS.gene065249.t1 AT2G23250 26.699 206 134 4 252 448 237 434 1.22e-14 76.3
MS.gene065249.t1 AT5G05900 21.962 469 304 18 1 436 1 440 1.47e-14 75.9
MS.gene065249.t1 AT3G46660 22.747 466 291 21 2 437 8 434 1.91e-14 75.5
MS.gene065249.t1 AT5G05870 25.207 242 163 8 202 435 200 431 6.29e-14 73.9
MS.gene065249.t1 AT1G22340 27.528 178 120 4 259 436 290 458 1.11e-13 73.6
MS.gene065249.t1 AT1G22360 30.055 183 122 4 259 438 287 466 1.11e-13 73.2
MS.gene065249.t1 AT3G21780 28.426 197 123 5 259 439 259 453 1.59e-13 72.8
MS.gene065249.t1 AT5G17050 28.492 179 115 5 258 436 269 434 2.61e-13 72.0
MS.gene065249.t1 AT3G46720 23.111 450 306 14 8 449 9 426 3.85e-13 71.6
MS.gene065249.t1 AT5G17030 26.667 240 152 10 206 436 209 433 4.49e-13 71.2
MS.gene065249.t1 AT2G23260 26.087 184 128 3 253 436 256 431 4.82e-13 71.2
MS.gene065249.t1 AT1G30530 28.571 182 113 5 258 437 263 429 1.34e-12 70.1

Find 96 sgRNAs with CRISPR-Local

Find 125 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCAAGCCTGTTCTTCTTTC+AGG 0.060989 2.4:-15932696 MS.gene065249:CDS
GATACAACAGCAATTAATTT+TGG 0.154395 2.4:-15932397 MS.gene065249:CDS
TCAGATGTTTCTTTCTCTTT+AGG 0.182567 2.4:-15933158 MS.gene065249:CDS
TATCACTAATACTAAGATTA+TGG 0.193070 2.4:-15932265 MS.gene065249:CDS
TAAAGATTAAAGGATGAAAT+AGG 0.198172 2.4:+15932885 None:intergenic
ACCCTTTCTTTAAACCCTTC+TGG 0.205952 2.4:+15932450 None:intergenic
TTGAAAAGAAAATTGAAATT+TGG 0.210511 2.4:-15932837 MS.gene065249:CDS
AAGTGATTAGATTTGGAAAA+AGG 0.234949 2.4:+15933237 None:intergenic
TTCATGATAATAAAGATTAA+AGG 0.250966 2.4:+15932875 None:intergenic
GATTACTTAGAACAAGAATT+TGG 0.254562 2.4:-15932717 MS.gene065249:CDS
CCTCTTATTAAACCAAGATT+TGG 0.271816 2.4:-15932091 MS.gene065249:CDS
CAGTTTCATGAATTGTTGTT+AGG 0.283546 2.4:-15932549 MS.gene065249:CDS
AAATCGAAGAAAACAATTTC+AGG 0.286633 2.4:+15933068 None:intergenic
AAAGAAAGGGTTAAGGAAAA+AGG 0.291849 2.4:-15932438 MS.gene065249:CDS
TTACCTTCACTCATTCTTGA+TGG 0.295615 2.4:+15932951 None:intergenic
CACATTGATGGCCTTCCCTT+TGG 0.300263 2.4:-15933194 MS.gene065249:CDS
CCCTTTCTTTAAACCCTTCT+GGG 0.310582 2.4:+15932451 None:intergenic
TTCTATGATAGGATCTATAA+TGG 0.313374 2.4:-15932801 MS.gene065249:CDS
GATGAAATAGGGAACCCTTT+TGG 0.318592 2.4:+15932897 None:intergenic
CCAAATCTTGGTTTAATAAG+AGG 0.322518 2.4:+15932091 None:intergenic
GAATCAAGTCTTTGCAATAC+TGG 0.328126 2.4:-15933010 MS.gene065249:CDS
TTCTTGGCTTGGAGGATTCA+AGG 0.337694 2.4:-15932625 MS.gene065249:CDS
CTCAATGTTCCTCACATTGA+TGG 0.338544 2.4:-15933206 MS.gene065249:CDS
TTGTTAGGGCTTGAGTTAAC+AGG 0.354653 2.4:-15932534 MS.gene065249:CDS
TTGGAGTCATTCTATGTTGA+TGG 0.359264 2.4:-15932072 MS.gene065249:CDS
GTTGTTTCGTGACACATTGC+GGG 0.368839 2.4:-15932359 MS.gene065249:CDS
TTGTTTGAGAGGTGAAGATA+TGG 0.371284 2.4:+15933332 None:intergenic
AGAAAATTGAAATTTGGAAG+TGG 0.379408 2.4:-15932831 MS.gene065249:CDS
ATGAGATTGGCAGAGAAGTT+AGG 0.396566 2.4:-15932137 MS.gene065249:CDS
AAAGATTAAAGGATGAAATA+GGG 0.396696 2.4:+15932886 None:intergenic
ATCACTAATACTAAGATTAT+GGG 0.406326 2.4:-15932264 MS.gene065249:CDS
CTCAAACAAATTAGCCAAAA+GGG 0.407355 2.4:-15933318 MS.gene065249:CDS
CCCAGAAGGGTTTAAAGAAA+GGG 0.411883 2.4:-15932451 MS.gene065249:CDS
CAATTCTTAAACCTCCTGTT+GGG 0.414744 2.4:-15932497 MS.gene065249:CDS
CATAGAATGACTCCAAATCT+TGG 0.419825 2.4:+15932079 None:intergenic
TTAGGTGGTTCAGGTAAAAC+AGG 0.424268 2.4:+15932672 None:intergenic
TTAAGCTTAAGCGATGCAAT+TGG 0.425748 2.4:-15932777 MS.gene065249:CDS
GCATTATATGAAACTGTTGC+TGG 0.427071 2.4:+15932978 None:intergenic
TTCGTGACACATTGCGGGGC+AGG 0.428495 2.4:-15932354 MS.gene065249:CDS
TCCCAGAAGGGTTTAAAGAA+AGG 0.428619 2.4:-15932452 MS.gene065249:CDS
GAAAATTGAAATTTGGAAGT+GGG 0.445604 2.4:-15932830 MS.gene065249:CDS
AAATGGGGTTCTTGGCTTGG+AGG 0.453582 2.4:-15932633 MS.gene065249:CDS
ACAGGTCCTGAAAGAAGAAC+AGG 0.453722 2.4:+15932690 None:intergenic
TGTTCTAAGTAATCAACATA+AGG 0.454869 2.4:+15932726 None:intergenic
GATTATGGGTAGGGAATTGA+AGG 0.455059 2.4:-15932250 MS.gene065249:CDS
AAGGTTGAATTGTTCTAACT+TGG 0.456717 2.4:+15933256 None:intergenic
GGGGCAGGTTCGTTGACAGA+GGG 0.457918 2.4:-15932339 MS.gene065249:CDS
ATGTTTCCATGGTTTGCAAT+GGG 0.460769 2.4:-15933365 MS.gene065249:CDS
GTGAAGAAGGGTGAAGAAGA+TGG 0.465141 2.4:-15932216 MS.gene065249:CDS
AGTTTCATGAATTGTTGTTA+GGG 0.467339 2.4:-15932548 MS.gene065249:CDS
ATGGGTAGGGAATTGAAGGT+TGG 0.469802 2.4:-15932246 MS.gene065249:CDS
TCTCAAACAAATTAGCCAAA+AGG 0.469915 2.4:-15933319 MS.gene065249:CDS
GTGTTGATGCCACATTTAGA+TGG 0.471941 2.4:-15932294 MS.gene065249:CDS
ACCTCCTGTTGGGTTTGAAA+CGG 0.479710 2.4:-15932487 MS.gene065249:CDS
GCAATTCTTAAACCTCCTGT+TGG 0.481352 2.4:-15932498 MS.gene065249:CDS
AGCGATGCAATTGGGTTCAA+AGG 0.483675 2.4:-15932768 MS.gene065249:CDS
TGCACATAGCAATGTTTCCA+TGG 0.496417 2.4:-15933376 MS.gene065249:CDS
TAAGCTTAAGCGATGCAATT+GGG 0.498221 2.4:-15932776 MS.gene065249:CDS
AAAAGCTTCGAGAATTAGTA+AGG 0.498384 2.4:-15932041 MS.gene065249:CDS
GCGATGCAATTGGGTTCAAA+GGG 0.503884 2.4:-15932767 MS.gene065249:CDS
TCATTAGTTTATTGTGCACT+TGG 0.508637 2.4:-15932597 MS.gene065249:CDS
ATGGATGATGAAAATGAGAT+TGG 0.511299 2.4:-15932150 MS.gene065249:CDS
GGTTGGAGTTGAAGTGAAGA+AGG 0.514720 2.4:-15932229 MS.gene065249:CDS
AGGGTTTAAAGAAAGGGTTA+AGG 0.519357 2.4:-15932445 MS.gene065249:CDS
AAGGTATTGTTCATAGTGGA+TGG 0.520003 2.4:-15932419 MS.gene065249:CDS
TCGACCGTTTCAAACCCAAC+AGG 0.521695 2.4:+15932483 None:intergenic
AATGTTTCCATGGTTTGCAA+TGG 0.527358 2.4:-15933366 MS.gene065249:CDS
TGGCTTGGAGGATTCAAGGA+TGG 0.527563 2.4:-15932621 MS.gene065249:CDS
GTCGAAGATGCTTTCCCAGA+AGG 0.530977 2.4:-15932465 MS.gene065249:CDS
CGGGGCAGGTTCGTTGACAG+AGG 0.537197 2.4:-15932340 MS.gene065249:CDS
TCGAAGATGCTTTCCCAGAA+GGG 0.541360 2.4:-15932464 MS.gene065249:CDS
CTAATACTAAGATTATGGGT+AGG 0.542356 2.4:-15932260 MS.gene065249:CDS
TAATACTAAGATTATGGGTA+GGG 0.548226 2.4:-15932259 MS.gene065249:CDS
TGAAGTAGTTTCAGCACCAA+AGG 0.552515 2.4:+15933178 None:intergenic
TCCACTCATCATGACAGCTA+TGG 0.562897 2.4:-15933135 MS.gene065249:CDS
GTTGGAGTTGAAGTGAAGAA+GGG 0.572282 2.4:-15932228 MS.gene065249:CDS
AAAGGGTGTAGAGAAATTGA+AGG 0.575653 2.4:-15932750 MS.gene065249:CDS
GAAGTAGTTTCAGCACCAAA+GGG 0.580113 2.4:+15933179 None:intergenic
TGAAGCTGTGAGAATTGTGA+TGG 0.583308 2.4:-15932169 MS.gene065249:CDS
GGTTGTTTCGTGACACATTG+CGG 0.584380 2.4:-15932360 MS.gene065249:CDS
AGAAGATGGATTCTTCACTA+AGG 0.600635 2.4:-15932202 MS.gene065249:CDS
ATTGCTATGTGCAAAGAAGA+TGG 0.602852 2.4:+15933386 None:intergenic
TAGTTTCAGCACCAAAGGGA+AGG 0.607120 2.4:+15933183 None:intergenic
TCAATGTGAGGAACATTGAG+AGG 0.609723 2.4:+15933209 None:intergenic
ACCGTTTCAAACCCAACAGG+AGG 0.610770 2.4:+15932486 None:intergenic
GGGCAGGTTCGTTGACAGAG+GGG 0.614836 2.4:-15932338 MS.gene065249:CDS
AAGTGTCCCATTGCAAACCA+TGG 0.628477 2.4:+15933359 None:intergenic
ATATGATCACCATCTAAATG+TGG 0.645038 2.4:+15932285 None:intergenic
TCAAACAAATTAGCCAAAAG+GGG 0.645079 2.4:-15933317 MS.gene065249:CDS
AAGGGTGTAGAGAAATTGAA+GGG 0.647340 2.4:-15932749 MS.gene065249:CDS
TCCATAGCTGTCATGATGAG+TGG 0.650873 2.4:+15933134 None:intergenic
CAATGTGAGGAACATTGAGA+GGG 0.652742 2.4:+15933210 None:intergenic
AAGGGAAGGCCATCAATGTG+AGG 0.655842 2.4:+15933197 None:intergenic
TTGTTTCGTGACACATTGCG+GGG 0.655977 2.4:-15932358 MS.gene065249:CDS
GTGAGAAGAAGTTCAACTTG+AGG 0.659642 2.4:+15933101 None:intergenic
GCTCCATCAAGAATGAGTGA+AGG 0.680653 2.4:-15932954 MS.gene065249:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTCATGATAATAAAGATTAA+AGG + chr2.4:15932561-15932580 None:intergenic 15.0%
!! TTGAAAAGAAAATTGAAATT+TGG - chr2.4:15932596-15932615 MS.gene065249:CDS 15.0%
!! AAAGATTAAAGGATGAAATA+GGG + chr2.4:15932550-15932569 None:intergenic 20.0%
!! ATCACTAATACTAAGATTAT+GGG - chr2.4:15933169-15933188 MS.gene065249:CDS 20.0%
!! TAAAGATTAAAGGATGAAAT+AGG + chr2.4:15932551-15932570 None:intergenic 20.0%
!! TATCACTAATACTAAGATTA+TGG - chr2.4:15933168-15933187 MS.gene065249:CDS 20.0%
!!! AAACTGTTTTAGATGAAAAA+TGG - chr2.4:15932783-15932802 MS.gene065249:CDS 20.0%
!!! AACTGTTTTAGATGAAAAAT+GGG - chr2.4:15932784-15932803 MS.gene065249:CDS 20.0%
!!! TTTTCATCTAAAACAGTTTT+AGG + chr2.4:15932782-15932801 None:intergenic 20.0%
! AAATCGAAGAAAACAATTTC+AGG + chr2.4:15932368-15932387 None:intergenic 25.0%
! AAGTGATTAGATTTGGAAAA+AGG + chr2.4:15932199-15932218 None:intergenic 25.0%
! AGAAAATTGAAATTTGGAAG+TGG - chr2.4:15932602-15932621 MS.gene065249:CDS 25.0%
! GAAAATTGAAATTTGGAAGT+GGG - chr2.4:15932603-15932622 MS.gene065249:CDS 25.0%
! GATTACTTAGAACAAGAATT+TGG - chr2.4:15932716-15932735 MS.gene065249:CDS 25.0%
! TAATACTAAGATTATGGGTA+GGG - chr2.4:15933174-15933193 MS.gene065249:CDS 25.0%
! TTCTATGATAGGATCTATAA+TGG - chr2.4:15932632-15932651 MS.gene065249:CDS 25.0%
!! AGTTTCATGAATTGTTGTTA+GGG - chr2.4:15932885-15932904 MS.gene065249:CDS 25.0%
!! GATACAACAGCAATTAATTT+TGG - chr2.4:15933036-15933055 MS.gene065249:CDS 25.0%
!! TCAATTTTCTTTTCAAAGCA+AGG + chr2.4:15932592-15932611 None:intergenic 25.0%
!! TGTTCTAAGTAATCAACATA+AGG + chr2.4:15932710-15932729 None:intergenic 25.0%
!!! ACTGTTTTAGATGAAAAATG+GGG - chr2.4:15932785-15932804 MS.gene065249:CDS 25.0%
AAAAGCTTCGAGAATTAGTA+AGG - chr2.4:15933392-15933411 MS.gene065249:CDS 30.0%
AAAGAAAGGGTTAAGGAAAA+AGG - chr2.4:15932995-15933014 MS.gene065249:CDS 30.0%
AAGGTTGAATTGTTCTAACT+TGG + chr2.4:15932180-15932199 None:intergenic 30.0%
ATATGATCACCATCTAAATG+TGG + chr2.4:15933151-15933170 None:intergenic 30.0%
ATGGATGATGAAAATGAGAT+TGG - chr2.4:15933283-15933302 MS.gene065249:CDS 30.0%
CCAAAAATTGCTCACAATTT+AGG - chr2.4:15932401-15932420 MS.gene065249:CDS 30.0%
CCAAATCTTGGTTTAATAAG+AGG + chr2.4:15933345-15933364 None:intergenic 30.0%
CCTCTTATTAAACCAAGATT+TGG - chr2.4:15933342-15933361 MS.gene065249:CDS 30.0%
CTAATACTAAGATTATGGGT+AGG - chr2.4:15933173-15933192 MS.gene065249:CDS 30.0%
CTCAAACAAATTAGCCAAAA+GGG - chr2.4:15932115-15932134 MS.gene065249:CDS 30.0%
GGGTAAAAAGTGATTAGATT+TGG + chr2.4:15932206-15932225 None:intergenic 30.0%
GGTTTAAGAATTGCCAAAAA+TGG + chr2.4:15932929-15932948 None:intergenic 30.0%
TCAAACAAATTAGCCAAAAG+GGG - chr2.4:15932116-15932135 MS.gene065249:CDS 30.0%
TCAGATGTTTCTTTCTCTTT+AGG - chr2.4:15932275-15932294 MS.gene065249:CDS 30.0%
TCTCAAACAAATTAGCCAAA+AGG - chr2.4:15932114-15932133 MS.gene065249:CDS 30.0%
! CAGTTTCATGAATTGTTGTT+AGG - chr2.4:15932884-15932903 MS.gene065249:CDS 30.0%
! CCTAAATTGTGAGCAATTTT+TGG + chr2.4:15932404-15932423 None:intergenic 30.0%
! GTTAACAGGTTATCCATTTT+TGG - chr2.4:15932913-15932932 MS.gene065249:CDS 30.0%
! TCATTAGTTTATTGTGCACT+TGG - chr2.4:15932836-15932855 MS.gene065249:CDS 30.0%
! TTTTCTTCGATTTCACCTTT+TGG - chr2.4:15932375-15932394 MS.gene065249:CDS 30.0%
!! GAAAAAGGTATTGTTCATAG+TGG - chr2.4:15933010-15933029 MS.gene065249:CDS 30.0%
!!! AACTTGGTTTGTGTTTTCTT+GGG + chr2.4:15932164-15932183 None:intergenic 30.0%
!!! GTGGGATTTTTTTCTATGAT+AGG - chr2.4:15932621-15932640 MS.gene065249:CDS 30.0%
!!! TAACTTGGTTTGTGTTTTCT+TGG + chr2.4:15932165-15932184 None:intergenic 30.0%
!!! TCATCTAAAACAGTTTTAGG+TGG + chr2.4:15932779-15932798 None:intergenic 30.0%
!!! TTTTGGCTAATTTGTTTGAG+AGG + chr2.4:15932115-15932134 None:intergenic 30.0%
AGGGTTTAAAGAAAGGGTTA+AGG - chr2.4:15932988-15933007 MS.gene065249:CDS 35.0%
ATCTTATGAAACCCCCAAAA+GGG - chr2.4:15932522-15932541 MS.gene065249:CDS 35.0%
ATTGCTATGTGCAAAGAAGA+TGG + chr2.4:15932050-15932069 None:intergenic 35.0%
CAATTCTTAAACCTCCTGTT+GGG - chr2.4:15932936-15932955 MS.gene065249:CDS 35.0%
CATAGAATGACTCCAAATCT+TGG + chr2.4:15933357-15933376 None:intergenic 35.0%
GAATCAAGTCTTTGCAATAC+TGG - chr2.4:15932423-15932442 MS.gene065249:CDS 35.0%
GCATTATATGAAACTGTTGC+TGG + chr2.4:15932458-15932477 None:intergenic 35.0%
TAAGCTTAAGCGATGCAATT+GGG - chr2.4:15932657-15932676 MS.gene065249:CDS 35.0%
TAGATGAAAAATGGGGTTCT+TGG - chr2.4:15932792-15932811 MS.gene065249:CDS 35.0%
TTAAGCTTAAGCGATGCAAT+TGG - chr2.4:15932656-15932675 MS.gene065249:CDS 35.0%
TTACCTTCACTCATTCTTGA+TGG + chr2.4:15932485-15932504 None:intergenic 35.0%
TTGGAGTCATTCTATGTTGA+TGG - chr2.4:15933361-15933380 MS.gene065249:CDS 35.0%
TTGTTTGAGAGGTGAAGATA+TGG + chr2.4:15932104-15932123 None:intergenic 35.0%
! AAAGGGTGTAGAGAAATTGA+AGG - chr2.4:15932683-15932702 MS.gene065249:CDS 35.0%
! AAGGGTGTAGAGAAATTGAA+GGG - chr2.4:15932684-15932703 MS.gene065249:CDS 35.0%
! AATGTTTCCATGGTTTGCAA+TGG - chr2.4:15932067-15932086 MS.gene065249:CDS 35.0%
! AGAAGATGGATTCTTCACTA+AGG - chr2.4:15933231-15933250 MS.gene065249:CDS 35.0%
! ATGAAATAGGGAACCCTTTT+GGG + chr2.4:15932538-15932557 None:intergenic 35.0%
! ATGTTTCCATGGTTTGCAAT+GGG - chr2.4:15932068-15932087 MS.gene065249:CDS 35.0%
!! AAGGTATTGTTCATAGTGGA+TGG - chr2.4:15933014-15933033 MS.gene065249:CDS 35.0%
!!! AAAACAGTTTTAGGTGGTTC+AGG + chr2.4:15932773-15932792 None:intergenic 35.0%
!!! ACTTGGTTTGTGTTTTCTTG+GGG + chr2.4:15932163-15932182 None:intergenic 35.0%
!!! AGCAATTTTTGGCAACCAAA+AGG + chr2.4:15932393-15932412 None:intergenic 35.0%
!!! ATTTTGGAACATTCGTCTGT+TGG - chr2.4:15933052-15933071 MS.gene065249:CDS 35.0%
ACCCTTTCTTTAAACCCTTC+TGG + chr2.4:15932986-15933005 None:intergenic 40.0%
ATGAGATTGGCAGAGAAGTT+AGG - chr2.4:15933296-15933315 MS.gene065249:CDS 40.0%
CAATGTGAGGAACATTGAGA+GGG + chr2.4:15932226-15932245 None:intergenic 40.0%
CCCAGAAGGGTTTAAAGAAA+GGG - chr2.4:15932982-15933001 MS.gene065249:CDS 40.0%
CCCTTTCTTTAAACCCTTCT+GGG + chr2.4:15932985-15933004 None:intergenic 40.0%
CTCAATGTTCCTCACATTGA+TGG - chr2.4:15932227-15932246 MS.gene065249:CDS 40.0%
GAAGTAGTTTCAGCACCAAA+GGG + chr2.4:15932257-15932276 None:intergenic 40.0%
GATCTTATGAAACCCCCAAA+AGG - chr2.4:15932521-15932540 MS.gene065249:CDS 40.0%
GATTATGGGTAGGGAATTGA+AGG - chr2.4:15933183-15933202 MS.gene065249:CDS 40.0%
GCAATTCTTAAACCTCCTGT+TGG - chr2.4:15932935-15932954 MS.gene065249:CDS 40.0%
GTGAGAAGAAGTTCAACTTG+AGG + chr2.4:15932335-15932354 None:intergenic 40.0%
GTTGGAGTTGAAGTGAAGAA+GGG - chr2.4:15933205-15933224 MS.gene065249:CDS 40.0%
TCAATGTGAGGAACATTGAG+AGG + chr2.4:15932227-15932246 None:intergenic 40.0%
TCCCAGAAGGGTTTAAAGAA+AGG - chr2.4:15932981-15933000 MS.gene065249:CDS 40.0%
TGAAGCTGTGAGAATTGTGA+TGG - chr2.4:15933264-15933283 MS.gene065249:CDS 40.0%
TGAAGTAGTTTCAGCACCAA+AGG + chr2.4:15932258-15932277 None:intergenic 40.0%
TGCACATAGCAATGTTTCCA+TGG - chr2.4:15932057-15932076 MS.gene065249:CDS 40.0%
TTAGGTGGTTCAGGTAAAAC+AGG + chr2.4:15932764-15932783 None:intergenic 40.0%
TTGTTAGGGCTTGAGTTAAC+AGG - chr2.4:15932899-15932918 MS.gene065249:CDS 40.0%
! AGAGATTTTGTGTCCCCTTT+TGG + chr2.4:15932132-15932151 None:intergenic 40.0%
! GATGAAATAGGGAACCCTTT+TGG + chr2.4:15932539-15932558 None:intergenic 40.0%
! GTGTTGATGCCACATTTAGA+TGG - chr2.4:15933139-15933158 MS.gene065249:CDS 40.0%
! TGAAATAGGGAACCCTTTTG+GGG + chr2.4:15932537-15932556 None:intergenic 40.0%
AAGTGTCCCATTGCAAACCA+TGG + chr2.4:15932077-15932096 None:intergenic 45.0%
ACAGGTCCTGAAAGAAGAAC+AGG + chr2.4:15932746-15932765 None:intergenic 45.0%
ACCTCCTGTTGGGTTTGAAA+CGG - chr2.4:15932946-15932965 MS.gene065249:CDS 45.0%
AGCGATGCAATTGGGTTCAA+AGG - chr2.4:15932665-15932684 MS.gene065249:CDS 45.0%
ATGGGTAGGGAATTGAAGGT+TGG - chr2.4:15933187-15933206 MS.gene065249:CDS 45.0%
GAAAAATGGGGTTCTTGGCT+TGG - chr2.4:15932797-15932816 MS.gene065249:CDS 45.0%
GCGATGCAATTGGGTTCAAA+GGG - chr2.4:15932666-15932685 MS.gene065249:CDS 45.0%
GCTCCATCAAGAATGAGTGA+AGG - chr2.4:15932479-15932498 MS.gene065249:CDS 45.0%
GGTTGGAGTTGAAGTGAAGA+AGG - chr2.4:15933204-15933223 MS.gene065249:CDS 45.0%
GTGAAGAAGGGTGAAGAAGA+TGG - chr2.4:15933217-15933236 MS.gene065249:CDS 45.0%
TAGTTTCAGCACCAAAGGGA+AGG + chr2.4:15932253-15932272 None:intergenic 45.0%
TCCACTCATCATGACAGCTA+TGG - chr2.4:15932298-15932317 MS.gene065249:CDS 45.0%
TCCATAGCTGTCATGATGAG+TGG + chr2.4:15932302-15932321 None:intergenic 45.0%
TCGAAGATGCTTTCCCAGAA+GGG - chr2.4:15932969-15932988 MS.gene065249:CDS 45.0%
TTGTTTCGTGACACATTGCG+GGG - chr2.4:15933075-15933094 MS.gene065249:CDS 45.0%
! GAAATAGGGAACCCTTTTGG+GGG + chr2.4:15932536-15932555 None:intergenic 45.0%
! GGTTGTTTCGTGACACATTG+CGG - chr2.4:15933073-15933092 MS.gene065249:CDS 45.0%
! GTTGTTTCGTGACACATTGC+GGG - chr2.4:15933074-15933093 MS.gene065249:CDS 45.0%
!! TTCTTGGCTTGGAGGATTCA+AGG - chr2.4:15932808-15932827 MS.gene065249:CDS 45.0%
AAGGGAAGGCCATCAATGTG+AGG + chr2.4:15932239-15932258 None:intergenic 50.0%
ACCGTTTCAAACCCAACAGG+AGG + chr2.4:15932950-15932969 None:intergenic 50.0%
GGCAAGCCTGTTCTTCTTTC+AGG - chr2.4:15932737-15932756 MS.gene065249:CDS 50.0%
GTCGAAGATGCTTTCCCAGA+AGG - chr2.4:15932968-15932987 MS.gene065249:CDS 50.0%
TCGACCGTTTCAAACCCAAC+AGG + chr2.4:15932953-15932972 None:intergenic 50.0%
! CACATTGATGGCCTTCCCTT+TGG - chr2.4:15932239-15932258 MS.gene065249:CDS 50.0%
! TGGCTTGGAGGATTCAAGGA+TGG - chr2.4:15932812-15932831 MS.gene065249:CDS 50.0%
!! AAATGGGGTTCTTGGCTTGG+AGG - chr2.4:15932800-15932819 MS.gene065249:CDS 50.0%
GGGCAGGTTCGTTGACAGAG+GGG - chr2.4:15933095-15933114 MS.gene065249:CDS 60.0%
GGGGCAGGTTCGTTGACAGA+GGG - chr2.4:15933094-15933113 MS.gene065249:CDS 60.0%
TTCGTGACACATTGCGGGGC+AGG - chr2.4:15933079-15933098 MS.gene065249:CDS 60.0%
CGGGGCAGGTTCGTTGACAG+AGG - chr2.4:15933093-15933112 MS.gene065249:CDS 65.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 15932038 15933417 15932038 ID=MS.gene065249
chr2.4 mRNA 15932038 15933417 15932038 ID=MS.gene065249.t1;Parent=MS.gene065249
chr2.4 exon 15932038 15933417 15932038 ID=MS.gene065249.t1.exon1;Parent=MS.gene065249.t1
chr2.4 CDS 15932038 15933417 15932038 ID=cds.MS.gene065249.t1;Parent=MS.gene065249.t1
Gene Sequence

>MS.gene065249

ATGGATTCACCATCTTCTTTGCACATAGCAATGTTTCCATGGTTTGCAATGGGACACTTAACTCCATATCTTCACCTCTCAAACAAATTAGCCAAAAGGGGACACAAAATCTCTTTCTTCATCCCCAAGAAAACACAAACCAAGTTAGAACAATTCAACCTTTTTCCAAATCTAATCACTTTTTACCCTCTCAATGTTCCTCACATTGATGGCCTTCCCTTTGGTGCTGAAACTACTTCAGATGTTTCTTTCTCTTTAGGTCCACTCATCATGACAGCTATGGATCAAACACAGCCTCAAGTTGAACTTCTTCTCACTCAACTAAATCCTGAAATTGTTTTCTTCGATTTCACCTTTTGGTTGCCAAAAATTGCTCACAATTTAGGAATCAAGTCTTTGCAATACTGGATTGTTAGTCCAGCAACAGTTTCATATAATGCAGCTCCATCAAGAATGAGTGAAGGTAAAAACTTGACTGAATTTGATCTTATGAAACCCCCAAAAGGGTTCCCTATTTCATCCTTTAATCTTTATTATCATGAAGCAAAGCACCTTGCTTTGAAAAGAAAATTGAAATTTGGAAGTGGGATTTTTTTCTATGATAGGATCTATAATGGTTTAAGCTTAAGCGATGCAATTGGGTTCAAAGGGTGTAGAGAAATTGAAGGGCCTTATGTTGATTACTTAGAACAAGAATTTGGCAAGCCTGTTCTTCTTTCAGGACCTGTTTTACCTGAACCACCTAAAACTGTTTTAGATGAAAAATGGGGTTCTTGGCTTGGAGGATTCAAGGATGGTTCATTAGTTTATTGTGCACTTGGAAGTGAATCTAAATTATCACAAAAGCAGTTTCATGAATTGTTGTTAGGGCTTGAGTTAACAGGTTATCCATTTTTGGCAATTCTTAAACCTCCTGTTGGGTTTGAAACGGTCGAAGATGCTTTCCCAGAAGGGTTTAAAGAAAGGGTTAAGGAAAAAGGTATTGTTCATAGTGGATGGATACAACAGCAATTAATTTTGGAACATTCGTCTGTTGGTTGTTTCGTGACACATTGCGGGGCAGGTTCGTTGACAGAGGGGTTGATAAATAATTGTCAGATCGTGTTGATGCCACATTTAGATGGTGATCATATCACTAATACTAAGATTATGGGTAGGGAATTGAAGGTTGGAGTTGAAGTGAAGAAGGGTGAAGAAGATGGATTCTTCACTAAGGAAAGTGTTTCTGAAGCTGTGAGAATTGTGATGGATGATGAAAATGAGATTGGCAGAGAAGTTAGGAGTAATCATGATAAACTGAGAAACCTCTTATTAAACCAAGATTTGGAGTCATTCTATGTTGATGGTTTCTGTGAAAAGCTTCGAGAATTAGTAAGGTGA

Protein sequence

>MS.gene065249.t1

MDSPSSLHIAMFPWFAMGHLTPYLHLSNKLAKRGHKISFFIPKKTQTKLEQFNLFPNLITFYPLNVPHIDGLPFGAETTSDVSFSLGPLIMTAMDQTQPQVELLLTQLNPEIVFFDFTFWLPKIAHNLGIKSLQYWIVSPATVSYNAAPSRMSEGKNLTEFDLMKPPKGFPISSFNLYYHEAKHLALKRKLKFGSGIFFYDRIYNGLSLSDAIGFKGCREIEGPYVDYLEQEFGKPVLLSGPVLPEPPKTVLDEKWGSWLGGFKDGSLVYCALGSESKLSQKQFHELLLGLELTGYPFLAILKPPVGFETVEDAFPEGFKERVKEKGIVHSGWIQQQLILEHSSVGCFVTHCGAGSLTEGLINNCQIVLMPHLDGDHITNTKIMGRELKVGVEVKKGEEDGFFTKESVSEAVRIVMDDENEIGREVRSNHDKLRNLLLNQDLESFYVDGFCEKLRELVR