AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene073190


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene073190.t1 MTR_2g083380 94.771 459 24 0 1 459 18 476 0.0 877
MS.gene073190.t1 MTR_2g083490 88.671 459 52 0 1 459 1 459 0.0 830
MS.gene073190.t1 MTR_2g083480 66.083 457 155 0 1 457 1 457 0.0 635
MS.gene073190.t1 MTR_2g083430 67.467 458 149 0 1 458 1 458 0.0 624
MS.gene073190.t1 MTR_4g079250 61.304 460 174 3 1 458 1 458 0.0 602
MS.gene073190.t1 MTR_4g079270 61.171 461 175 3 1 459 1 459 0.0 599
MS.gene073190.t1 MTR_2g083420 62.009 458 150 1 1 458 1 434 0.0 596
MS.gene073190.t1 MTR_2g083390 61.790 458 151 1 1 458 1 434 0.0 589
MS.gene073190.t1 MTR_2g014900 56.416 452 196 1 8 459 7 457 0.0 537
MS.gene073190.t1 MTR_2g083360 49.558 452 123 4 7 458 28 374 3.80e-143 414
MS.gene073190.t1 MTR_1g090270 42.299 461 248 10 7 458 14 465 6.63e-124 369
MS.gene073190.t1 MTR_2g086283 68.482 257 29 2 203 459 133 337 9.41e-111 330
MS.gene073190.t1 MTR_2g086283 82.963 135 22 1 11 145 1 134 1.33e-73 235
MS.gene073190.t1 MTR_4g059370 41.975 324 175 6 142 458 75 392 4.49e-86 269
MS.gene073190.t1 MTR_8g068330 32.272 471 293 14 1 455 1 461 9.03e-70 229
MS.gene073190.t1 MTR_2g008225 33.118 465 288 10 2 454 9 462 2.34e-68 226
MS.gene073190.t1 MTR_2g008220 33.333 465 287 11 2 454 8 461 1.15e-66 221
MS.gene073190.t1 MTR_7g067330 33.333 465 258 15 2 455 3 426 4.16e-64 213
MS.gene073190.t1 MTR_8g068340 31.545 466 301 12 2 455 6 465 1.13e-63 213
MS.gene073190.t1 MTR_8g068360 31.875 480 288 14 2 459 6 468 3.57e-63 212
MS.gene073190.t1 MTR_2g008226 34.034 476 270 21 7 455 9 467 6.26e-63 211
MS.gene073190.t1 MTR_4g079280 45.614 228 79 2 11 238 1 183 1.19e-62 201
MS.gene073190.t1 MTR_4g123553 32.553 470 273 16 7 456 14 459 1.23e-62 210
MS.gene073190.t1 MTR_6g042310 31.974 466 285 13 6 457 16 463 6.65e-62 208
MS.gene073190.t1 MTR_7g067120 33.261 463 255 16 2 452 3 423 3.15e-61 206
MS.gene073190.t1 MTR_6g036650 30.992 484 281 13 1 456 11 469 2.89e-60 204
MS.gene073190.t1 MTR_2g046620 30.983 468 283 15 7 456 15 460 7.81e-59 200
MS.gene073190.t1 MTR_2g014930 39.792 289 94 5 17 305 9 217 1.07e-54 182
MS.gene073190.t1 MTR_8g007650 30.573 471 302 11 6 459 5 467 5.22e-54 187
MS.gene073190.t1 MTR_8g007565 30.361 471 303 11 6 459 5 467 3.60e-53 185
MS.gene073190.t1 MTR_4g077960 31.020 461 272 15 17 456 1 436 4.70e-53 184
MS.gene073190.t1 MTR_5g066410 30.426 470 279 12 11 459 1 443 1.43e-52 183
MS.gene073190.t1 MTR_3g435310 29.011 455 265 12 7 456 17 418 3.19e-48 171
MS.gene073190.t1 MTR_1g090280 43.478 184 99 3 279 458 133 315 1.38e-46 164
MS.gene073190.t1 MTR_2g083440 57.843 102 43 0 357 458 11 112 4.15e-37 132
MS.gene073190.t1 MTR_8g071070 27.406 478 316 15 3 457 2 471 1.68e-35 137
MS.gene073190.t1 MTR_8g066610 25.558 493 318 16 1 457 1 480 2.92e-32 128
MS.gene073190.t1 MTR_4g031800 26.623 462 284 16 7 434 8 448 2.75e-31 125
MS.gene073190.t1 MTR_8g009073 27.887 459 279 16 6 434 4 440 3.11e-31 125
MS.gene073190.t1 MTR_8g009055 26.201 458 290 15 6 434 4 442 1.19e-30 124
MS.gene073190.t1 MTR_2g098430 25.214 468 293 15 9 439 7 454 2.16e-30 123
MS.gene073190.t1 MTR_7g070660 26.134 463 296 14 3 433 6 454 2.72e-30 123
MS.gene073190.t1 MTR_8g009050 27.273 462 280 17 6 434 4 442 4.87e-30 122
MS.gene073190.t1 MTR_1g062380 26.362 459 276 18 5 418 13 454 2.01e-29 120
MS.gene073190.t1 MTR_0009s0240 26.033 484 300 19 3 458 2 455 2.52e-29 120
MS.gene073190.t1 MTR_7g070810 26.577 444 285 13 7 421 8 439 2.93e-29 120
MS.gene073190.t1 MTR_8g009073 30.795 302 179 11 151 434 22 311 1.03e-28 116
MS.gene073190.t1 MTR_7g013180 26.559 433 273 16 8 419 5 413 2.91e-28 116
MS.gene073190.t1 MTR_7g013200 25.764 458 273 16 8 437 5 423 5.50e-28 115
MS.gene073190.t1 MTR_6g038240 26.164 451 282 17 8 436 11 432 1.31e-27 115
MS.gene073190.t1 MTR_8g008990 25.745 470 289 17 6 439 4 449 1.90e-27 114
MS.gene073190.t1 MTR_5g087620 26.767 467 289 18 8 433 10 464 3.62e-27 114
MS.gene073190.t1 MTR_7g070940 24.838 463 302 14 1 433 1 447 4.69e-27 113
MS.gene073190.t1 MTR_8g006710 25.893 448 287 16 9 427 7 438 6.90e-27 113
MS.gene073190.t1 MTR_8g006730 24.945 453 296 16 8 431 6 443 1.03e-26 112
MS.gene073190.t1 MTR_6g038220 25.275 455 280 18 8 436 11 431 1.31e-26 112
MS.gene073190.t1 MTR_3g009510 31.203 266 150 8 199 436 194 454 1.42e-26 112
MS.gene073190.t1 MTR_8g466240 26.186 485 301 20 1 457 1 456 1.56e-26 112
MS.gene073190.t1 MTR_7g070740 24.736 473 294 15 3 433 6 458 1.86e-26 112
MS.gene073190.t1 MTR_4g485590 27.628 409 238 13 8 394 9 381 2.54e-26 110
MS.gene073190.t1 MTR_7g070610 24.948 477 285 16 5 433 10 461 2.57e-26 111
MS.gene073190.t1 MTR_5g045970 25.996 477 299 15 1 436 7 470 3.10e-26 111
MS.gene073190.t1 MTR_6g035265 25.361 485 274 18 1 434 6 453 3.29e-26 111
MS.gene073190.t1 MTR_7g013220 25.690 471 272 19 8 439 5 436 4.36e-26 110
MS.gene073190.t1 MTR_4g117950 25.615 488 283 16 1 437 1 459 5.50e-26 110
MS.gene073190.t1 MTR_7g117405 27.766 461 287 19 8 436 12 458 7.56e-26 110
MS.gene073190.t1 MTR_7g071040 25.105 478 287 18 3 433 12 465 7.79e-26 110
MS.gene073190.t1 MTR_7g070870 26.044 407 273 11 4 394 15 409 8.79e-26 109
MS.gene073190.t1 MTR_8g009063 25.591 465 285 17 6 436 11 448 1.66e-25 109
MS.gene073190.t1 MTR_0536s0010 25.647 464 263 19 1 421 16 440 2.00e-25 108
MS.gene073190.t1 MTR_8g009067 27.273 462 278 20 6 434 4 440 2.77e-25 108
MS.gene073190.t1 MTR_6g488280 34.254 181 106 3 259 427 258 437 3.52e-25 108
MS.gene073190.t1 MTR_0428s0010 34.254 181 106 3 259 427 258 437 3.52e-25 108
MS.gene073190.t1 MTR_8g009067 34.759 187 108 5 258 434 140 322 3.84e-25 106
MS.gene073190.t1 MTR_4g117980 24.348 460 292 16 7 428 10 451 4.12e-25 108
MS.gene073190.t1 MTR_4g024020 26.596 470 290 16 7 436 8 462 5.12e-25 107
MS.gene073190.t1 MTR_6g038200 26.049 453 280 19 8 436 11 432 6.07e-25 107
MS.gene073190.t1 MTR_6g023665 30.544 239 150 6 203 427 208 444 6.14e-25 107
MS.gene073190.t1 MTR_0078s0010 26.522 460 285 16 6 434 4 441 8.13e-25 107
MS.gene073190.t1 MTR_8g012635 31.227 269 149 9 198 435 185 448 1.00e-24 106
MS.gene073190.t1 MTR_8g027885 25.664 452 298 16 9 439 19 453 1.01e-24 106
MS.gene073190.t1 MTR_4g485620 25.499 451 283 14 20 436 1 432 1.06e-24 106
MS.gene073190.t1 MTR_6g038230 26.211 454 278 20 8 436 11 432 1.45e-24 106
MS.gene073190.t1 MTR_7g102450 26.144 459 289 17 8 436 11 449 1.85e-24 106
MS.gene073190.t1 MTR_7g055710 24.249 466 305 13 3 433 6 458 2.21e-24 105
MS.gene073190.t1 MTR_6g033615 34.302 172 107 4 258 427 252 419 3.77e-24 105
MS.gene073190.t1 MTR_5g035560 24.473 474 304 16 5 454 8 451 4.51e-24 105
MS.gene073190.t1 MTR_0184s0040 26.415 477 274 19 6 439 19 461 5.33e-24 104
MS.gene073190.t1 MTR_0078s0190 26.415 477 274 19 6 439 19 461 5.33e-24 104
MS.gene073190.t1 MTR_8g006270 28.857 350 203 12 117 437 114 446 7.31e-24 104
MS.gene073190.t1 MTR_8g012650 27.353 340 205 11 123 435 124 448 9.32e-24 103
MS.gene073190.t1 MTR_8g077590 28.955 335 193 8 112 427 115 423 1.01e-23 103
MS.gene073190.t1 MTR_8g027870 24.779 452 302 14 9 439 19 453 1.08e-23 103
MS.gene073190.t1 MTR_6g038300 25.219 456 281 17 8 436 11 433 1.09e-23 103
MS.gene073190.t1 MTR_4g485630 26.923 468 266 19 7 429 8 444 1.20e-23 103
MS.gene073190.t1 MTR_7g070930 23.480 477 306 14 1 433 1 462 1.31e-23 103
MS.gene073190.t1 MTR_0078s0060 25.974 462 286 17 6 435 4 441 1.44e-23 103
MS.gene073190.t1 MTR_4g117960 25.546 458 285 16 1 421 6 444 1.50e-23 103
MS.gene073190.t1 MTR_7g117170 24.834 451 299 15 9 434 16 451 1.53e-23 103
MS.gene073190.t1 MTR_1g019510 24.459 462 300 16 6 439 4 444 1.57e-23 103
MS.gene073190.t1 MTR_7g070800 24.678 466 296 16 5 433 3 450 1.85e-23 103
MS.gene073190.t1 MTR_7g046490 31.687 243 144 8 209 435 204 440 1.92e-23 102
MS.gene073190.t1 MTR_6g033725 35.754 179 109 4 258 434 263 437 2.12e-23 102
MS.gene073190.t1 MTR_7g070780 24.307 469 301 15 3 433 6 458 3.04e-23 102
MS.gene073190.t1 MTR_2g034990 24.569 464 296 17 7 438 10 451 3.47e-23 102
MS.gene073190.t1 MTR_8g465670 24.889 450 303 14 9 434 8 446 3.90e-23 102
MS.gene073190.t1 MTR_8g083280 24.565 460 289 18 8 436 7 439 4.23e-23 102
MS.gene073190.t1 MTR_4g485640 26.712 438 278 17 18 428 219 640 4.36e-23 102
MS.gene073190.t1 MTR_6g033625 29.960 247 151 8 199 427 191 433 5.21e-23 101
MS.gene073190.t1 MTR_8g008970 25.708 459 289 16 6 434 4 440 7.12e-23 102
MS.gene073190.t1 MTR_8g008970 28.814 236 149 8 207 436 541 763 4.08e-15 78.6
MS.gene073190.t1 MTR_8g012730 34.031 191 108 4 259 435 99 285 8.29e-23 99.0
MS.gene073190.t1 MTR_0184s0030 31.604 212 126 6 231 425 228 437 9.18e-23 100
MS.gene073190.t1 MTR_7g047030 25.974 462 281 17 8 434 6 441 1.46e-22 100
MS.gene073190.t1 MTR_7g047270 25.974 462 281 17 8 434 6 441 1.46e-22 100
MS.gene073190.t1 MTR_5g035580 34.426 183 111 5 252 433 257 431 1.49e-22 100
MS.gene073190.t1 MTR_2g059240 25.542 415 269 11 8 397 13 412 1.92e-22 100
MS.gene073190.t1 MTR_5g039900 24.301 465 300 15 5 433 10 458 2.04e-22 100
MS.gene073190.t1 MTR_7g102560 25.527 474 289 15 7 436 8 461 2.13e-22 100
MS.gene073190.t1 MTR_1g107315 25.968 439 283 15 1 412 1 424 3.34e-22 99.4
MS.gene073190.t1 MTR_1g107350 25.054 463 299 17 1 434 1 444 4.71e-22 99.0
MS.gene073190.t1 MTR_5g027210 26.506 249 150 3 212 428 212 459 7.42e-22 98.2
MS.gene073190.t1 MTR_6g005600 27.246 334 207 10 123 434 124 443 7.83e-22 98.2
MS.gene073190.t1 MTR_8g006220 24.183 459 303 13 9 434 7 453 9.17e-22 98.2
MS.gene073190.t1 MTR_8g006260 23.451 452 299 15 8 427 6 442 9.36e-22 98.2
MS.gene073190.t1 MTR_2g046820 34.579 214 126 6 236 438 236 446 9.61e-22 97.8
MS.gene073190.t1 MTR_7g102460 26.115 471 288 18 7 436 8 459 1.19e-21 97.8
MS.gene073190.t1 MTR_8g032950 23.851 457 294 17 7 427 11 449 1.27e-21 97.8
MS.gene073190.t1 MTR_7g070910 23.347 484 288 17 3 433 6 459 1.65e-21 97.4
MS.gene073190.t1 MTR_1g019520 31.606 193 117 4 258 439 5 193 1.93e-21 92.8
MS.gene073190.t1 MTR_6g033675 31.373 204 130 6 236 434 242 440 1.96e-21 97.1
MS.gene073190.t1 MTR_7g102490 25.000 472 294 17 7 436 8 461 2.03e-21 97.1
MS.gene073190.t1 MTR_8g012745 31.944 216 125 7 237 436 237 446 2.04e-21 97.1
MS.gene073190.t1 MTR_6g033660 34.831 178 110 4 259 434 266 439 2.10e-21 97.1
MS.gene073190.t1 MTR_5g098930 24.684 474 289 17 7 438 4 451 2.14e-21 97.1
MS.gene073190.t1 MTR_5g016660 23.542 463 285 15 12 427 14 454 2.38e-21 97.1
MS.gene073190.t1 MTR_6g035185 23.779 471 302 16 1 433 6 457 2.76e-21 96.7
MS.gene073190.t1 MTR_8g044140 25.265 471 261 16 46 454 19 460 3.05e-21 96.3
MS.gene073190.t1 MTR_7g102550 26.237 465 288 19 8 432 9 458 3.18e-21 96.7
MS.gene073190.t1 MTR_3g049970 24.520 469 290 14 3 434 4 445 3.47e-21 96.3
MS.gene073190.t1 MTR_2g035020 24.161 447 296 15 7 421 10 445 4.37e-21 96.3
MS.gene073190.t1 MTR_8g012630 32.461 191 111 4 259 435 206 392 4.58e-21 95.5
MS.gene073190.t1 MTR_3g009490 33.533 167 95 4 283 436 3 166 4.73e-21 90.9
MS.gene073190.t1 MTR_7g102520 33.511 188 113 5 259 436 281 466 1.27e-20 94.7
MS.gene073190.t1 MTR_8g074550 24.431 483 297 15 1 434 1 464 1.43e-20 94.7
MS.gene073190.t1 MTR_4g108250 23.750 480 301 15 1 433 1 462 2.31e-20 94.0
MS.gene073190.t1 MTR_2g046750 34.259 216 128 7 236 440 239 451 2.31e-20 93.6
MS.gene073190.t1 MTR_5g040030 25.967 362 220 11 104 433 117 462 2.38e-20 94.0
MS.gene073190.t1 MTR_2g040530 32.632 190 116 4 259 438 261 448 3.84e-20 93.2
MS.gene073190.t1 MTR_5g067170 32.065 184 108 5 258 425 267 449 4.07e-20 93.2
MS.gene073190.t1 MTR_0536s0020 31.122 196 116 6 258 435 266 460 5.03e-20 92.8
MS.gene073190.t1 MTR_4g117890 30.387 181 106 5 258 421 261 438 5.74e-20 92.8
MS.gene073190.t1 MTR_5g019580 30.594 219 127 5 239 433 238 455 8.37e-20 92.0
MS.gene073190.t1 MTR_7g013240 23.744 438 272 17 8 420 6 406 8.56e-20 91.7
MS.gene073190.t1 MTR_5g072860 23.282 451 299 14 8 436 18 443 8.59e-20 92.0
MS.gene073190.t1 MTR_5g019580 30.594 219 127 5 239 433 262 479 8.85e-20 92.4
MS.gene073190.t1 MTR_7g013260 23.733 434 278 16 8 420 6 407 1.08e-19 91.7
MS.gene073190.t1 MTR_3g069690 26.908 249 161 7 199 434 185 425 1.24e-19 91.7
MS.gene073190.t1 MTR_2g035040 31.461 178 107 4 258 421 174 350 1.35e-19 90.9
MS.gene073190.t1 MTR_3g479520 22.993 461 290 16 8 427 15 451 1.61e-19 91.3
MS.gene073190.t1 MTR_5g029800 31.280 211 113 7 258 437 265 474 1.77e-19 91.3
MS.gene073190.t1 MTR_8g090095 28.794 257 165 7 197 438 206 459 1.77e-19 91.3
MS.gene073190.t1 MTR_8g088560 31.225 253 142 9 204 438 199 437 1.88e-19 90.9
MS.gene073190.t1 MTR_4g082820 26.637 443 258 18 7 406 6 424 2.30e-19 90.9
MS.gene073190.t1 MTR_3g079480 23.965 459 288 16 8 427 21 457 2.37e-19 90.9
MS.gene073190.t1 MTR_5g090610 27.368 285 173 8 199 455 183 461 2.63e-19 90.5
MS.gene073190.t1 MTR_1g032490 25.056 443 280 16 2 412 4 426 2.83e-19 90.5
MS.gene073190.t1 MTR_7g080950 32.620 187 115 6 253 439 253 428 2.85e-19 90.5
MS.gene073190.t1 MTR_8g064880 25.439 456 274 16 3 416 4 435 3.82e-19 90.1
MS.gene073190.t1 MTR_5g090660 23.291 468 306 14 8 438 5 456 4.25e-19 90.5
MS.gene073190.t1 MTR_8g083290 33.520 179 112 5 259 436 269 441 6.51e-19 89.4
MS.gene073190.t1 MTR_7g012120 31.351 185 111 5 259 428 272 455 8.19e-19 89.4
MS.gene073190.t1 MTR_6g035295 23.736 455 294 16 6 422 10 449 9.04e-19 89.0
MS.gene073190.t1 MTR_5g098960 29.832 238 143 9 229 456 225 448 9.95e-19 88.6
MS.gene073190.t1 MTR_5g045960 24.898 490 275 19 6 436 7 462 1.02e-18 89.0
MS.gene073190.t1 MTR_4g128720 25.056 443 277 20 7 425 14 425 1.72e-18 88.2
MS.gene073190.t1 MTR_7g070860 23.593 462 288 15 7 433 6 437 1.88e-18 88.2
MS.gene073190.t1 MTR_4g118000 23.853 436 277 16 12 417 16 426 1.94e-18 87.8
MS.gene073190.t1 MTR_8g064870 25.112 446 280 14 5 416 8 433 2.71e-18 87.4
MS.gene073190.t1 MTR_4g094920 30.811 185 119 6 259 437 281 462 3.53e-18 87.4
MS.gene073190.t1 MTR_4g128690 25.346 434 283 16 1 419 8 415 4.41e-18 86.7
MS.gene073190.t1 MTR_5g090630 23.210 461 308 15 8 438 5 449 5.26e-18 86.7
MS.gene073190.t1 MTR_5g075440 27.500 240 145 6 215 440 213 437 5.39e-18 86.7
MS.gene073190.t1 MTR_7g080940 29.891 184 118 5 253 436 258 430 9.59e-18 85.9
MS.gene073190.t1 MTR_4g095008 31.902 163 104 5 259 417 266 425 1.06e-17 85.9
MS.gene073190.t1 MTR_7g080935 29.348 184 119 5 253 436 258 430 1.55e-17 85.1
MS.gene073190.t1 MTR_7g470610 33.333 168 105 5 253 418 128 290 1.76e-17 83.2
MS.gene073190.t1 MTR_7g070583 33.333 168 105 5 253 418 128 290 1.76e-17 83.2
MS.gene073190.t1 MTR_5g072810 23.937 447 291 16 8 434 12 429 2.17e-17 84.7
MS.gene073190.t1 MTR_4g008630 28.216 241 158 6 209 437 204 441 2.36e-17 84.7
MS.gene073190.t1 MTR_1g040310 22.940 449 299 13 1 416 8 442 2.40e-17 84.7
MS.gene073190.t1 MTR_3g069710 27.839 273 166 10 202 457 196 454 3.18e-17 84.3
MS.gene073190.t1 MTR_1g029540 24.889 450 283 18 13 437 19 438 3.41e-17 84.0
MS.gene073190.t1 MTR_6g014170 30.435 184 114 6 253 434 266 437 9.58e-17 82.8
MS.gene073190.t1 MTR_0891s0010 27.094 203 134 6 259 458 99 290 1.01e-16 80.9
MS.gene073190.t1 MTR_5g090670 23.333 480 293 17 9 438 6 460 1.35e-16 82.4
MS.gene073190.t1 MTR_5g004940 29.319 191 121 4 253 434 193 378 1.43e-16 81.6
MS.gene073190.t1 MTR_3g084540 22.766 470 298 16 8 436 6 451 1.44e-16 82.4
MS.gene073190.t1 MTR_5g090580 26.132 287 180 7 199 458 197 478 1.72e-16 82.0
MS.gene073190.t1 MTR_1g107365 28.502 207 123 6 219 412 253 447 1.72e-16 82.0
MS.gene073190.t1 MTR_5g090700 28.409 264 163 9 199 438 199 460 2.56e-16 81.6
MS.gene073190.t1 MTR_4g082810 33.758 157 95 3 236 384 240 395 2.81e-16 80.9
MS.gene073190.t1 MTR_6g014020 30.337 178 110 6 253 426 284 451 4.15e-16 80.9
MS.gene073190.t1 MTR_3g084520 28.708 209 127 7 259 451 272 474 6.09e-16 80.5
MS.gene073190.t1 MTR_6g014200 29.891 184 115 6 253 434 281 452 6.33e-16 80.1
MS.gene073190.t1 MTR_3g479490 28.994 169 111 4 259 427 283 442 8.59e-16 79.7
MS.gene073190.t1 MTR_3g479610 29.586 169 110 4 259 427 122 281 1.06e-15 78.2
MS.gene073190.t1 MTR_5g016480 29.412 170 114 5 259 427 275 439 1.08e-15 79.7
MS.gene073190.t1 MTR_1g107360 26.087 253 161 7 219 456 222 463 1.67e-15 79.0
MS.gene073190.t1 MTR_3g031450 22.072 444 281 15 8 427 18 420 1.69e-15 79.0
MS.gene073190.t1 MTR_6g013450 29.282 181 121 4 253 429 285 462 2.16e-15 78.6
MS.gene073190.t1 MTR_3g031400 22.101 457 294 15 3 436 10 427 2.38e-15 78.6
MS.gene073190.t1 MTR_5g072830 23.025 443 297 14 8 434 10 424 2.68e-15 78.2
MS.gene073190.t1 MTR_6g013920 29.379 177 111 6 253 427 283 447 3.01e-15 78.2
MS.gene073190.t1 MTR_3g084530 28.796 191 123 5 253 436 266 450 3.62e-15 77.8
MS.gene073190.t1 MTR_6g013440 26.996 263 165 9 199 441 219 474 4.55e-15 77.8
MS.gene073190.t1 MTR_6g013900 28.814 177 112 6 253 427 283 447 1.11e-14 76.3
MS.gene073190.t1 MTR_6g014220 27.869 183 121 5 253 429 282 459 1.32e-14 76.3
MS.gene073190.t1 MTR_8g007585 29.213 178 112 6 259 434 202 367 1.99e-14 75.1
MS.gene073190.t1 MTR_1g107375 28.194 227 139 7 220 434 215 429 2.04e-14 75.5
MS.gene073190.t1 MTR_7g039550 29.018 224 134 6 220 421 5 225 2.07e-14 73.9
MS.gene073190.t1 MTR_6g078320 25.105 474 281 16 8 428 11 463 3.46e-14 75.1
MS.gene073190.t1 MTR_8g009840 26.368 201 132 3 273 459 332 530 3.76e-14 75.1
MS.gene073190.t1 MTR_4g064987 23.747 459 272 22 1 425 1 415 6.58e-14 73.9
MS.gene073190.t1 MTR_3g008010 28.235 170 109 6 259 425 288 447 6.85e-14 73.9
MS.gene073190.t1 MTR_6g014190 27.322 183 122 5 253 429 91 268 7.26e-14 72.4
MS.gene073190.t1 MTR_0036s0220 26.596 188 125 6 253 439 282 457 8.12e-14 73.6
MS.gene073190.t1 MTR_6g014187 28.261 184 118 6 253 434 284 455 1.02e-13 73.6
MS.gene073190.t1 MTR_6g014250 26.344 186 123 6 253 436 282 455 1.12e-13 73.2
MS.gene073190.t1 MTR_2g008210 29.412 170 111 5 259 427 284 445 1.17e-13 73.2
MS.gene073190.t1 MTR_6g014310 25.417 240 151 9 210 434 230 456 2.65e-13 72.0
MS.gene073190.t1 MTR_4g064987 23.441 465 272 22 1 425 1 421 3.20e-13 71.6
MS.gene073190.t1 MTR_4g094220 28.889 180 113 7 258 434 287 454 4.48e-13 71.2
MS.gene073190.t1 MTR_7g080900 24.190 463 286 21 3 436 7 433 4.55e-13 71.2
MS.gene073190.t1 MTR_6g014270 27.174 184 120 6 253 434 283 454 6.79e-13 70.9
MS.gene073190.t1 MTR_8g056740 26.009 223 147 5 220 430 121 337 8.39e-13 70.1
MS.gene073190.t1 MTR_6g014290 29.167 144 95 4 253 394 282 420 1.16e-12 70.1
MS.gene073190.t1 MTR_6g014150 27.219 169 111 5 253 419 281 439 2.16e-12 69.3
MS.gene073190.t1 MTR_0536s0030 31.655 139 81 4 309 434 194 331 3.95e-12 67.8
MS.gene073190.t1 MTR_6g013960 30.282 142 96 3 253 394 284 422 2.07e-11 66.2
MS.gene073190.t1 MTR_5g072850 25.911 247 156 7 215 455 162 387 9.55e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene073190.t1 AT5G54010 48.465 456 224 5 5 459 3 448 2.57e-155 448
MS.gene073190.t1 AT5G53990 47.380 458 216 7 6 458 4 441 1.46e-150 436
MS.gene073190.t1 AT4G27570 46.593 455 225 6 8 458 7 447 4.53e-147 427
MS.gene073190.t1 AT5G54060 47.289 461 234 6 5 459 10 467 1.99e-146 426
MS.gene073190.t1 AT1G64910 46.035 454 228 6 6 458 4 441 1.21e-145 423
MS.gene073190.t1 AT4G27560 46.154 455 227 6 8 458 7 447 1.29e-144 421
MS.gene073190.t1 AT2G22930 47.149 456 216 6 6 456 4 439 1.44e-144 421
MS.gene073190.t1 AT1G64920 46.623 459 220 8 7 458 5 445 1.41e-142 416
MS.gene073190.t1 AT4G09500 45.934 455 221 8 7 456 5 439 1.03e-140 410
MS.gene073190.t1 AT3G29630 44.298 456 230 5 5 454 3 440 1.43e-137 403
MS.gene073190.t1 AT1G50580 43.833 454 235 5 5 455 3 439 2.94e-133 392
MS.gene073190.t1 AT3G29630 43.267 453 213 6 5 454 3 414 3.10e-129 381
MS.gene073190.t1 AT4G09500 43.833 454 207 9 7 456 5 414 2.26e-127 376
MS.gene073190.t1 AT5G49690 33.843 458 280 9 7 455 9 452 1.18e-73 239
MS.gene073190.t1 AT2G22590 34.698 464 280 15 5 454 12 466 1.36e-69 229
MS.gene073190.t1 AT5G65550 32.334 467 282 17 7 454 8 459 1.65e-63 213
MS.gene073190.t1 AT2G22930 44.444 225 103 4 6 226 4 210 2.26e-58 194
MS.gene073190.t1 AT2G22930 41.237 97 53 2 363 456 192 287 8.98e-16 78.2
MS.gene073190.t1 AT5G03490 26.862 443 284 11 8 434 19 437 2.90e-37 142
MS.gene073190.t1 AT1G51210 26.517 445 276 13 8 433 20 432 2.40e-34 133
MS.gene073190.t1 AT5G12890 26.809 470 291 17 4 437 6 458 1.03e-33 132
MS.gene073190.t1 AT2G15490 28.200 461 278 17 7 428 6 452 2.18e-33 132
MS.gene073190.t1 AT2G15490 27.948 458 280 16 7 428 6 449 2.72e-33 131
MS.gene073190.t1 AT2G36750 29.221 462 286 17 7 436 9 461 6.37e-33 130
MS.gene073190.t1 AT2G36770 28.758 459 279 16 7 427 13 461 1.93e-32 129
MS.gene073190.t1 AT2G31790 28.728 456 269 16 8 436 8 434 2.00e-32 129
MS.gene073190.t1 AT4G34138 27.565 497 287 14 5 456 8 476 2.74e-32 129
MS.gene073190.t1 AT2G15480 28.205 468 281 19 7 434 9 461 3.08e-32 129
MS.gene073190.t1 AT1G73880 26.256 438 282 15 2 417 8 426 5.35e-32 127
MS.gene073190.t1 AT1G05675 27.802 464 261 20 8 436 6 430 9.80e-32 126
MS.gene073190.t1 AT2G15480 28.070 456 278 17 7 426 9 450 1.12e-31 127
MS.gene073190.t1 AT1G05680 27.056 462 267 19 8 436 6 430 5.28e-31 124
MS.gene073190.t1 AT2G36780 28.051 467 274 16 6 427 12 461 2.77e-30 123
MS.gene073190.t1 AT4G34135 26.637 443 281 15 7 416 10 441 1.99e-29 120
MS.gene073190.t1 AT4G34131 26.596 470 292 18 2 436 4 455 2.58e-29 120
MS.gene073190.t1 AT2G16890 28.222 450 274 19 8 429 9 437 3.29e-28 117
MS.gene073190.t1 AT3G50740 27.044 477 289 18 8 449 7 459 6.78e-28 116
MS.gene073190.t1 AT2G36800 27.155 464 293 17 5 431 9 464 5.19e-27 114
MS.gene073190.t1 AT2G36760 27.922 462 293 15 7 436 13 466 5.80e-27 113
MS.gene073190.t1 AT4G36770 34.419 215 122 6 234 435 232 440 6.33e-27 113
MS.gene073190.t1 AT1G10400 26.233 446 287 17 7 429 6 432 1.91e-26 111
MS.gene073190.t1 AT2G18570 23.861 461 305 13 1 434 1 442 3.64e-26 110
MS.gene073190.t1 AT2G16890 28.176 433 264 18 8 412 9 422 9.63e-26 109
MS.gene073190.t1 AT2G18560 28.571 252 163 5 199 434 102 352 8.75e-25 105
MS.gene073190.t1 AT3G53160 25.519 482 304 20 1 443 1 466 1.16e-24 106
MS.gene073190.t1 AT2G31750 25.268 467 277 19 1 433 1 429 3.79e-24 105
MS.gene073190.t1 AT2G31750 25.268 467 277 19 1 433 1 429 6.35e-24 104
MS.gene073190.t1 AT5G59590 25.581 473 294 20 8 458 10 446 9.51e-24 103
MS.gene073190.t1 AT5G14860 25.541 462 294 17 1 429 1 445 1.15e-23 103
MS.gene073190.t1 AT2G43820 25.000 464 271 18 8 438 7 426 1.26e-23 103
MS.gene073190.t1 AT3G53150 25.156 481 292 16 7 436 21 484 1.93e-23 103
MS.gene073190.t1 AT5G59580 24.197 467 308 16 8 455 9 448 3.20e-23 102
MS.gene073190.t1 AT2G30150 22.153 483 305 16 8 458 13 456 1.29e-22 100
MS.gene073190.t1 AT2G29730 34.101 217 126 7 220 425 222 432 2.01e-22 100
MS.gene073190.t1 AT1G01420 24.330 485 293 20 8 453 11 460 3.88e-22 99.4
MS.gene073190.t1 AT1G01420 24.330 485 293 20 8 453 8 457 4.00e-22 99.4
MS.gene073190.t1 AT2G30140 23.516 455 266 16 8 427 13 420 7.89e-22 98.2
MS.gene073190.t1 AT2G30140 23.451 452 269 15 8 427 13 419 9.52e-22 97.8
MS.gene073190.t1 AT4G15480 24.837 459 300 16 3 434 14 454 1.75e-21 97.4
MS.gene073190.t1 AT2G30150 22.176 478 301 16 13 458 2 440 2.40e-21 96.7
MS.gene073190.t1 AT1G06000 22.356 416 253 11 8 399 10 379 2.58e-21 96.3
MS.gene073190.t1 AT4G14090 24.681 470 274 20 9 443 16 440 3.94e-21 95.9
MS.gene073190.t1 AT5G38040 24.573 468 288 19 16 454 18 449 5.26e-21 95.5
MS.gene073190.t1 AT2G43840 32.778 180 111 4 259 438 257 426 7.26e-21 95.1
MS.gene073190.t1 AT2G43840 32.778 180 111 4 259 438 257 426 7.82e-21 95.1
MS.gene073190.t1 AT4G15550 24.842 475 287 19 2 436 7 451 7.90e-21 95.1
MS.gene073190.t1 AT1G05560 24.551 501 283 21 3 454 2 456 3.66e-20 93.2
MS.gene073190.t1 AT5G26310 22.926 458 301 15 8 435 7 442 4.51e-20 93.2
MS.gene073190.t1 AT1G07250 29.437 231 151 6 236 456 246 474 5.51e-20 92.8
MS.gene073190.t1 AT1G05560 24.802 504 278 22 3 454 52 506 5.77e-20 92.8
MS.gene073190.t1 AT2G36970 26.250 240 164 6 202 437 219 449 7.55e-20 92.4
MS.gene073190.t1 AT1G01390 24.286 490 292 19 1 444 1 457 8.12e-20 92.4
MS.gene073190.t1 AT1G01390 24.286 490 292 19 1 444 18 474 8.52e-20 92.4
MS.gene073190.t1 AT2G28080 22.318 466 327 16 12 454 22 475 1.28e-19 91.7
MS.gene073190.t1 AT1G07260 30.568 229 147 6 236 454 245 471 4.85e-19 89.7
MS.gene073190.t1 AT4G01070 30.481 187 115 5 259 434 261 443 8.44e-19 89.4
MS.gene073190.t1 AT4G15490 22.894 463 307 16 1 434 1 442 8.63e-19 89.0
MS.gene073190.t1 AT5G66690 28.512 242 150 6 236 459 233 469 1.29e-18 88.6
MS.gene073190.t1 AT1G05530 23.158 475 272 19 8 436 5 432 1.37e-18 88.2
MS.gene073190.t1 AT5G05880 26.087 276 171 11 187 437 178 445 2.56e-18 87.4
MS.gene073190.t1 AT2G36790 37.912 182 99 6 259 427 280 460 6.27e-18 86.7
MS.gene073190.t1 AT3G21560 24.839 467 281 19 8 434 12 448 6.40e-18 86.7
MS.gene073190.t1 AT1G24100 22.222 459 298 17 8 438 11 438 8.11e-18 85.9
MS.gene073190.t1 AT2G29710 33.155 187 111 6 245 425 254 432 8.37e-18 85.9
MS.gene073190.t1 AT4G15280 29.389 262 154 7 207 439 231 490 1.05e-17 85.9
MS.gene073190.t1 AT4G15280 29.389 262 154 7 207 439 199 458 1.12e-17 85.9
MS.gene073190.t1 AT5G05890 26.848 257 167 9 199 437 196 449 2.13e-17 84.7
MS.gene073190.t1 AT3G46670 22.526 475 323 18 2 457 3 451 2.40e-17 84.7
MS.gene073190.t1 AT3G16520 29.442 197 120 5 258 437 262 456 3.27e-17 84.3
MS.gene073190.t1 AT3G11340 27.155 232 152 7 203 427 192 413 3.51e-17 84.0
MS.gene073190.t1 AT3G21760 28.934 197 122 4 259 439 271 465 4.13e-17 84.0
MS.gene073190.t1 AT4G15500 29.508 183 121 5 253 434 263 438 5.37e-17 83.6
MS.gene073190.t1 AT4G15260 28.141 199 122 5 259 439 144 339 6.19e-17 82.4
MS.gene073190.t1 AT3G16520 30.303 165 109 3 258 418 262 424 7.34e-17 83.2
MS.gene073190.t1 AT3G16520 30.303 165 109 3 258 418 262 424 8.44e-17 82.8
MS.gene073190.t1 AT5G05860 22.717 449 295 14 7 435 8 424 1.23e-16 82.4
MS.gene073190.t1 AT1G22360 32.022 178 111 5 259 436 287 454 1.34e-16 82.4
MS.gene073190.t1 AT3G46700 24.421 475 295 21 8 459 9 442 1.68e-16 82.0
MS.gene073190.t1 AT3G21800 29.319 191 116 4 259 432 265 453 2.33e-16 81.6
MS.gene073190.t1 AT3G21790 27.230 213 136 4 259 454 268 478 2.79e-16 81.6
MS.gene073190.t1 AT2G29740 30.000 200 130 5 236 427 250 447 2.80e-16 81.3
MS.gene073190.t1 AT3G46690 22.831 438 291 15 8 425 9 419 3.73e-16 80.9
MS.gene073190.t1 AT2G29750 31.892 185 116 6 241 417 255 437 4.58e-16 80.9
MS.gene073190.t1 AT1G78270 29.609 179 115 6 259 436 289 457 4.96e-16 80.9
MS.gene073190.t1 AT3G21750 28.643 199 122 4 259 439 257 453 2.32e-15 78.6
MS.gene073190.t1 AT1G22400 31.953 169 105 5 259 427 291 449 9.75e-15 76.6
MS.gene073190.t1 AT5G38010 27.419 248 155 9 210 449 209 439 1.06e-14 76.3
MS.gene073190.t1 AT3G02100 23.732 493 285 24 8 458 13 456 1.14e-14 76.3
MS.gene073190.t1 AT3G46660 22.961 466 290 21 2 437 8 434 1.15e-14 76.3
MS.gene073190.t1 AT2G23250 26.699 206 134 4 252 448 237 434 1.20e-14 76.3
MS.gene073190.t1 AT5G05900 21.935 465 309 16 1 436 1 440 5.50e-14 74.3
MS.gene073190.t1 AT5G05870 25.207 242 163 8 202 435 200 431 6.18e-14 73.9
MS.gene073190.t1 AT3G21780 28.426 197 123 4 259 439 259 453 6.40e-14 73.9
MS.gene073190.t1 AT2G26480 24.138 261 165 10 197 444 186 426 6.45e-14 73.9
MS.gene073190.t1 AT1G22360 30.055 183 122 4 259 438 287 466 7.57e-14 73.9
MS.gene073190.t1 AT1G22340 27.528 178 120 4 259 436 290 458 9.84e-14 73.6
MS.gene073190.t1 AT5G17050 28.492 179 115 5 258 436 269 434 1.22e-13 73.2
MS.gene073190.t1 AT3G46720 24.070 457 293 17 8 449 9 426 1.59e-13 72.8
MS.gene073190.t1 AT5G17030 26.667 240 152 10 206 436 209 433 3.17e-13 72.0
MS.gene073190.t1 AT2G23260 26.087 184 128 3 253 436 256 431 5.71e-13 71.2
MS.gene073190.t1 AT1G30530 28.571 182 113 5 258 437 263 429 8.15e-13 70.5

Find 97 sgRNAs with CRISPR-Local

Find 127 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATACAGCAGCAATTAATTT+TGG 0.171458 2.3:-14263044 MS.gene073190:CDS
GGTAAGCCTGTTCTTCTTTC+GGG 0.172406 2.3:-14263343 MS.gene073190:CDS
TCAGATGTTTCTTTCTCTTT+AGG 0.182567 2.3:-14263805 MS.gene073190:CDS
TATCACTAATACTAAGATTA+TGG 0.193070 2.3:-14262912 MS.gene073190:CDS
ACCCTTTCTTTAAACCCTTC+TGG 0.205952 2.3:+14263097 None:intergenic
TAAAGATTAAAGGATGAAAT+AGG 0.210543 2.3:+14263532 None:intergenic
TTCATGAGAATAAAGATTAA+AGG 0.229126 2.3:+14263522 None:intergenic
AAGTGATTAAATTTGGAAAA+AGG 0.230878 2.3:+14263884 None:intergenic
TGGTAAGCCTGTTCTTCTTT+CGG 0.257859 2.3:-14263344 MS.gene073190:CDS
GATTACATAGAACAAGAATT+TGG 0.262127 2.3:-14263364 MS.gene073190:CDS
CCTCTTATTAAACCAAGATT+TGG 0.271816 2.3:-14262738 MS.gene073190:CDS
CACATTCATGGTCTTCCATT+TGG 0.279809 2.3:-14263841 MS.gene073190:CDS
CAGTTTCATGAATTGTTGTT+AGG 0.283546 2.3:-14263196 MS.gene073190:CDS
AAAGAAAGGGTTAAGGAAAA+AGG 0.291849 2.3:-14263085 MS.gene073190:CDS
GTACCTTCACTCATTCTTGA+TGG 0.295615 2.3:+14263598 None:intergenic
CCCTTTCTTTAAACCCTTCT+GGG 0.310582 2.3:+14263098 None:intergenic
TTCTATGATAGGATCTATAA+TGG 0.313374 2.3:-14263448 MS.gene073190:CDS
GATGAAATAGGGAACCCTTT+TGG 0.318592 2.3:+14263544 None:intergenic
GAATAAAGTCTTTGCAATAC+TGG 0.319068 2.3:-14263657 MS.gene073190:CDS
CCAAATCTTGGTTTAATAAG+AGG 0.322518 2.3:+14262738 None:intergenic
CTCAATGTTCCTCACATTCA+TGG 0.331733 2.3:-14263853 MS.gene073190:CDS
TTCTTGGCTTGGAGGATTCA+AGG 0.337694 2.3:-14263272 MS.gene073190:CDS
AGAAAATTGGAATTTGGAAG+TGG 0.352232 2.3:-14263478 MS.gene073190:CDS
TTGTTAGGGCTTGAGTTAAC+AGG 0.354653 2.3:-14263181 MS.gene073190:CDS
TTGGAGTCATTCTATGTTGA+TGG 0.359264 2.3:-14262719 MS.gene073190:CDS
GTTGTTTCGTGACACATTGC+GGG 0.368839 2.3:-14263006 MS.gene073190:CDS
TTGTTAGAGAGATGAAGATA+TGG 0.377944 2.3:+14263979 None:intergenic
AAATCAAAGAAAACAATATC+CGG 0.387779 2.3:+14263715 None:intergenic
ATGAGATTGGCAGAGAAGTT+AGG 0.396566 2.3:-14262784 MS.gene073190:CDS
ATCACTAATACTAAGATTAT+GGG 0.406326 2.3:-14262911 MS.gene073190:CDS
TTAAGCTTAAGTGATGCAAT+TGG 0.409271 2.3:-14263424 MS.gene073190:CDS
CTCTAACAAATTAGCCAAAA+GGG 0.410982 2.3:-14263965 MS.gene073190:CDS
CCCAGAAGGGTTTAAAGAAA+GGG 0.411883 2.3:-14263098 MS.gene073190:CDS
CAATTCTTAAACCTCCTGTT+GGG 0.414744 2.3:-14263144 MS.gene073190:CDS
CATAGAATGACTCCAAATCT+TGG 0.419825 2.3:+14262726 None:intergenic
TCTCTAACAAATTAGCCAAA+AGG 0.421960 2.3:-14263966 MS.gene073190:CDS
TTAGGTGGTTCAGGTAAAAC+AGG 0.424268 2.3:+14263319 None:intergenic
GCATTATATGAAACTGTTGC+TGG 0.427071 2.3:+14263625 None:intergenic
TTCGTGACACATTGCGGGGC+AGG 0.428495 2.3:-14263001 MS.gene073190:CDS
TCCCAGAAGGGTTTAAAGAA+AGG 0.428619 2.3:-14263099 MS.gene073190:CDS
TGTTCTATGTAATCAACATA+AGG 0.436879 2.3:+14263373 None:intergenic
AAAGATTAAAGGATGAAATA+GGG 0.445886 2.3:+14263533 None:intergenic
AAATGGGGTTCTTGGCTTGG+AGG 0.453582 2.3:-14263280 MS.gene073190:CDS
GATTATGGGTAGGGAATTGA+AGG 0.455059 2.3:-14262897 MS.gene073190:CDS
AAGGTTGAATTGTTCTAACT+TGG 0.456717 2.3:+14263903 None:intergenic
ATGTTTCCATGGTTTGCAAT+GGG 0.460769 2.3:-14264012 MS.gene073190:CDS
GTGAAGAAGGGTGAAGAAGA+TGG 0.465141 2.3:-14262863 MS.gene073190:CDS
AGTTTCATGAATTGTTGTTA+GGG 0.467339 2.3:-14263195 MS.gene073190:CDS
ATGGGTAGGGAATTGAAGGT+TGG 0.469802 2.3:-14262893 MS.gene073190:CDS
GTGTTGATGCCACATTTAGA+TGG 0.471941 2.3:-14262941 MS.gene073190:CDS
ACCTCCTGTTGGGTTTGAAA+CGG 0.479710 2.3:-14263134 MS.gene073190:CDS
GCAATTCTTAAACCTCCTGT+TGG 0.481352 2.3:-14263145 MS.gene073190:CDS
TAAGCTTAAGTGATGCAATT+GGG 0.482649 2.3:-14263423 MS.gene073190:CDS
ACAGGTCCCGAAAGAAGAAC+AGG 0.491442 2.3:+14263337 None:intergenic
GAAAATTGGAATTTGGAAGT+GGG 0.493556 2.3:-14263477 MS.gene073190:CDS
GTGATGCAATTGGGTTCAAA+GGG 0.494596 2.3:-14263414 MS.gene073190:CDS
TGCACATAGCAATGTTTCCA+TGG 0.496417 2.3:-14264023 MS.gene073190:CDS
AAAAGCTTCGAGAATTAGTA+AGG 0.498384 2.3:-14262688 MS.gene073190:CDS
AGTGATGCAATTGGGTTCAA+AGG 0.500112 2.3:-14263415 MS.gene073190:CDS
TCATTAGTTTATTGTGCACT+TGG 0.508637 2.3:-14263244 MS.gene073190:CDS
ATGGATGATGAAAATGAGAT+TGG 0.511299 2.3:-14262797 MS.gene073190:CDS
GGTTGGAGTTGAAGTGAAGA+AGG 0.514720 2.3:-14262876 MS.gene073190:CDS
AGGGTTTAAAGAAAGGGTTA+AGG 0.519357 2.3:-14263092 MS.gene073190:CDS
AAGGTATTGTTCATAGTGGA+TGG 0.520003 2.3:-14263066 MS.gene073190:CDS
TCGACCGTTTCAAACCCAAC+AGG 0.521695 2.3:+14263130 None:intergenic
GAAGTGGTTTCAGCACCAAA+TGG 0.527013 2.3:+14263826 None:intergenic
AATGTTTCCATGGTTTGCAA+TGG 0.527358 2.3:-14264013 MS.gene073190:CDS
TGGCTTGGAGGATTCAAGGA+TGG 0.527563 2.3:-14263268 MS.gene073190:CDS
GTCGAAGATGCTTTCCCAGA+AGG 0.530977 2.3:-14263112 MS.gene073190:CDS
TCGAAGATGCTTTCCCAGAA+GGG 0.541360 2.3:-14263111 MS.gene073190:CDS
CTAATACTAAGATTATGGGT+AGG 0.542356 2.3:-14262907 MS.gene073190:CDS
TAATACTAAGATTATGGGTA+GGG 0.548226 2.3:-14262906 MS.gene073190:CDS
TCCACTCATCATGACAGCTA+TGG 0.562897 2.3:-14263782 MS.gene073190:CDS
AGAGAAAGAAACATCTGAAG+TGG 0.564919 2.3:+14263810 None:intergenic
GTTGGAGTTGAAGTGAAGAA+GGG 0.572282 2.3:-14262875 MS.gene073190:CDS
GGGGCAGGTTCATTGACAGA+GGG 0.573500 2.3:-14262986 MS.gene073190:CDS
AAAGGGTGTAGAGAAATTGA+AGG 0.575653 2.3:-14263397 MS.gene073190:CDS
AATCAAAGAAAACAATATCC+GGG 0.576082 2.3:+14263716 None:intergenic
TGAAGCTGTGAGAATTGTGA+TGG 0.583308 2.3:-14262816 MS.gene073190:CDS
GGTTGTTTCGTGACACATTG+CGG 0.584380 2.3:-14263007 MS.gene073190:CDS
AGAAGATGGATTGTTCACTA+AGG 0.600678 2.3:-14262849 MS.gene073190:CDS
TGAATGTGAGGAACATTGAG+AGG 0.602741 2.3:+14263856 None:intergenic
ATTGCTATGTGCAAAGAAGA+TGG 0.602852 2.3:+14264033 None:intergenic
TCTTCTCACTCAACTAAACC+CGG 0.605904 2.3:-14263734 MS.gene073190:CDS
ACCGTTTCAAACCCAACAGG+AGG 0.610770 2.3:+14263133 None:intergenic
TCTAACAAATTAGCCAAAAG+GGG 0.613111 2.3:-14263964 MS.gene073190:CDS
AAGTGTCCCATTGCAAACCA+TGG 0.628477 2.3:+14264006 None:intergenic
ATATGATCACCATCTAAATG+TGG 0.645038 2.3:+14262932 None:intergenic
AAGGGTGTAGAGAAATTGAA+GGG 0.647340 2.3:-14263396 MS.gene073190:CDS
TCCATAGCTGTCATGATGAG+TGG 0.650873 2.3:+14263781 None:intergenic
CGGGGCAGGTTCATTGACAG+AGG 0.655282 2.3:-14262987 MS.gene073190:CDS
TTGTTTCGTGACACATTGCG+GGG 0.655977 2.3:-14263005 MS.gene073190:CDS
GAATGTGAGGAACATTGAGA+GGG 0.658468 2.3:+14263857 None:intergenic
GTGAGAAGAAGTTCAACTTG+AGG 0.659642 2.3:+14263748 None:intergenic
AATGGAAGACCATGAATGTG+AGG 0.666315 2.3:+14263844 None:intergenic
GCTCCATCAAGAATGAGTGA+AGG 0.680653 2.3:-14263601 MS.gene073190:CDS
GGGCAGGTTCATTGACAGAG+GGG 0.697167 2.3:-14262985 MS.gene073190:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAAAAGAAAATTGGAATT+TGG - chr2.3:14263243-14263262 MS.gene073190:CDS 15.0%
!! AAAGATTAAAGGATGAAATA+GGG + chr2.3:14263197-14263216 None:intergenic 20.0%
!! AAATCAAAGAAAACAATATC+CGG + chr2.3:14263015-14263034 None:intergenic 20.0%
!! AAGTGATTAAATTTGGAAAA+AGG + chr2.3:14262846-14262865 None:intergenic 20.0%
!! ATCACTAATACTAAGATTAT+GGG - chr2.3:14263816-14263835 MS.gene073190:CDS 20.0%
!! TAAAGATTAAAGGATGAAAT+AGG + chr2.3:14263198-14263217 None:intergenic 20.0%
!! TATCACTAATACTAAGATTA+TGG - chr2.3:14263815-14263834 MS.gene073190:CDS 20.0%
!! TTCATGAGAATAAAGATTAA+AGG + chr2.3:14263208-14263227 None:intergenic 20.0%
!!! AAACTGTTTTAGATGAAAAA+TGG - chr2.3:14263430-14263449 MS.gene073190:CDS 20.0%
!!! AACTGTTTTAGATGAAAAAT+GGG - chr2.3:14263431-14263450 MS.gene073190:CDS 20.0%
!!! TTTTCATCTAAAACAGTTTT+AGG + chr2.3:14263429-14263448 None:intergenic 20.0%
! AATCAAAGAAAACAATATCC+GGG + chr2.3:14263014-14263033 None:intergenic 25.0%
! CCAAAAATTGCTCATAATTT+AGG - chr2.3:14263048-14263067 MS.gene073190:CDS 25.0%
! GATTACATAGAACAAGAATT+TGG - chr2.3:14263363-14263382 MS.gene073190:CDS 25.0%
! GGGTAAAAAGTGATTAAATT+TGG + chr2.3:14262853-14262872 None:intergenic 25.0%
! TAATACTAAGATTATGGGTA+GGG - chr2.3:14263821-14263840 MS.gene073190:CDS 25.0%
! TGTTCTATGTAATCAACATA+AGG + chr2.3:14263357-14263376 None:intergenic 25.0%
! TTCTATGATAGGATCTATAA+TGG - chr2.3:14263279-14263298 MS.gene073190:CDS 25.0%
!! AGTTTCATGAATTGTTGTTA+GGG - chr2.3:14263532-14263551 MS.gene073190:CDS 25.0%
!! CCTAAATTATGAGCAATTTT+TGG + chr2.3:14263051-14263070 None:intergenic 25.0%
!!! ACTGTTTTAGATGAAAAATG+GGG - chr2.3:14263432-14263451 MS.gene073190:CDS 25.0%
!!! CCAATTTTCTTTTTAAAGCA+AGG + chr2.3:14263239-14263258 None:intergenic 25.0%
!!! CCTTGCTTTAAAAAGAAAAT+TGG - chr2.3:14263236-14263255 MS.gene073190:CDS 25.0%
!!! TTTTCTTTGATTTCACCTTT+TGG - chr2.3:14263022-14263041 MS.gene073190:CDS 25.0%
AAAAGCTTCGAGAATTAGTA+AGG - chr2.3:14264039-14264058 MS.gene073190:CDS 30.0%
AAAGAAAGGGTTAAGGAAAA+AGG - chr2.3:14263642-14263661 MS.gene073190:CDS 30.0%
AAGGTTGAATTGTTCTAACT+TGG + chr2.3:14262827-14262846 None:intergenic 30.0%
AGAAAATTGGAATTTGGAAG+TGG - chr2.3:14263249-14263268 MS.gene073190:CDS 30.0%
ATATGATCACCATCTAAATG+TGG + chr2.3:14263798-14263817 None:intergenic 30.0%
ATATTATGAAACCCCCAAAA+GGG - chr2.3:14263169-14263188 MS.gene073190:CDS 30.0%
ATGGATGATGAAAATGAGAT+TGG - chr2.3:14263930-14263949 MS.gene073190:CDS 30.0%
CCAAATCTTGGTTTAATAAG+AGG + chr2.3:14263992-14264011 None:intergenic 30.0%
CCTCTTATTAAACCAAGATT+TGG - chr2.3:14263989-14264008 MS.gene073190:CDS 30.0%
CTAATACTAAGATTATGGGT+AGG - chr2.3:14263820-14263839 MS.gene073190:CDS 30.0%
CTCTAACAAATTAGCCAAAA+GGG - chr2.3:14262762-14262781 MS.gene073190:CDS 30.0%
GAAAATTGGAATTTGGAAGT+GGG - chr2.3:14263250-14263269 MS.gene073190:CDS 30.0%
GAATAAAGTCTTTGCAATAC+TGG - chr2.3:14263070-14263089 MS.gene073190:CDS 30.0%
GGTTTAAGAATTGCCAAAAA+TGG + chr2.3:14263576-14263595 None:intergenic 30.0%
TAAGCTTAAGTGATGCAATT+GGG - chr2.3:14263304-14263323 MS.gene073190:CDS 30.0%
TCAGATGTTTCTTTCTCTTT+AGG - chr2.3:14262922-14262941 MS.gene073190:CDS 30.0%
TCTAACAAATTAGCCAAAAG+GGG - chr2.3:14262763-14262782 MS.gene073190:CDS 30.0%
TCTCTAACAAATTAGCCAAA+AGG - chr2.3:14262761-14262780 MS.gene073190:CDS 30.0%
TTAAGCTTAAGTGATGCAAT+TGG - chr2.3:14263303-14263322 MS.gene073190:CDS 30.0%
TTGTTAGAGAGATGAAGATA+TGG + chr2.3:14262751-14262770 None:intergenic 30.0%
! CAGTTTCATGAATTGTTGTT+AGG - chr2.3:14263531-14263550 MS.gene073190:CDS 30.0%
! GATACAGCAGCAATTAATTT+TGG - chr2.3:14263683-14263702 MS.gene073190:CDS 30.0%
! GTTAACAGGTTATCCATTTT+TGG - chr2.3:14263560-14263579 MS.gene073190:CDS 30.0%
! TCATTAGTTTATTGTGCACT+TGG - chr2.3:14263483-14263502 MS.gene073190:CDS 30.0%
!! GAAAAAGGTATTGTTCATAG+TGG - chr2.3:14263657-14263676 MS.gene073190:CDS 30.0%
!!! AACTTGGTTTGTGTTTTCTT+GGG + chr2.3:14262811-14262830 None:intergenic 30.0%
!!! AGCAATTTTTGGTAACCAAA+AGG + chr2.3:14263040-14263059 None:intergenic 30.0%
!!! GTGGGATTTTTTTCTATGAT+AGG - chr2.3:14263268-14263287 MS.gene073190:CDS 30.0%
!!! TAACTTGGTTTGTGTTTTCT+TGG + chr2.3:14262812-14262831 None:intergenic 30.0%
!!! TCATCTAAAACAGTTTTAGG+TGG + chr2.3:14263426-14263445 None:intergenic 30.0%
AGAGAAAGAAACATCTGAAG+TGG + chr2.3:14262920-14262939 None:intergenic 35.0%
AGGGTTTAAAGAAAGGGTTA+AGG - chr2.3:14263635-14263654 MS.gene073190:CDS 35.0%
ATTGCTATGTGCAAAGAAGA+TGG + chr2.3:14262697-14262716 None:intergenic 35.0%
CAATTCTTAAACCTCCTGTT+GGG - chr2.3:14263583-14263602 MS.gene073190:CDS 35.0%
CATAGAATGACTCCAAATCT+TGG + chr2.3:14264004-14264023 None:intergenic 35.0%
GATATTATGAAACCCCCAAA+AGG - chr2.3:14263168-14263187 MS.gene073190:CDS 35.0%
GCATTATATGAAACTGTTGC+TGG + chr2.3:14263105-14263124 None:intergenic 35.0%
TAGATGAAAAATGGGGTTCT+TGG - chr2.3:14263439-14263458 MS.gene073190:CDS 35.0%
TTGGAGTCATTCTATGTTGA+TGG - chr2.3:14264008-14264027 MS.gene073190:CDS 35.0%
! AAAGGGTGTAGAGAAATTGA+AGG - chr2.3:14263330-14263349 MS.gene073190:CDS 35.0%
! AAGGGTGTAGAGAAATTGAA+GGG - chr2.3:14263331-14263350 MS.gene073190:CDS 35.0%
! AATGTTTCCATGGTTTGCAA+TGG - chr2.3:14262714-14262733 MS.gene073190:CDS 35.0%
! ATGAAATAGGGAACCCTTTT+GGG + chr2.3:14263185-14263204 None:intergenic 35.0%
! ATGTTTCCATGGTTTGCAAT+GGG - chr2.3:14262715-14262734 MS.gene073190:CDS 35.0%
!! AAGGTATTGTTCATAGTGGA+TGG - chr2.3:14263661-14263680 MS.gene073190:CDS 35.0%
!! AGAAGATGGATTGTTCACTA+AGG - chr2.3:14263878-14263897 MS.gene073190:CDS 35.0%
!!! AAAACAGTTTTAGGTGGTTC+AGG + chr2.3:14263420-14263439 None:intergenic 35.0%
!!! ACTTGGTTTGTGTTTTCTTG+GGG + chr2.3:14262810-14262829 None:intergenic 35.0%
!!! ATTTTGGAACATTCGTCTGT+TGG - chr2.3:14263699-14263718 MS.gene073190:CDS 35.0%
AATGGAAGACCATGAATGTG+AGG + chr2.3:14262886-14262905 None:intergenic 40.0%
ACCCTTTCTTTAAACCCTTC+TGG + chr2.3:14263633-14263652 None:intergenic 40.0%
AGTGATGCAATTGGGTTCAA+AGG - chr2.3:14263312-14263331 MS.gene073190:CDS 40.0%
ATGAGATTGGCAGAGAAGTT+AGG - chr2.3:14263943-14263962 MS.gene073190:CDS 40.0%
CACATTCATGGTCTTCCATT+TGG - chr2.3:14262886-14262905 MS.gene073190:CDS 40.0%
CCCAGAAGGGTTTAAAGAAA+GGG - chr2.3:14263629-14263648 MS.gene073190:CDS 40.0%
CCCTTTCTTTAAACCCTTCT+GGG + chr2.3:14263632-14263651 None:intergenic 40.0%
CTCAATGTTCCTCACATTCA+TGG - chr2.3:14262874-14262893 MS.gene073190:CDS 40.0%
GAATGTGAGGAACATTGAGA+GGG + chr2.3:14262873-14262892 None:intergenic 40.0%
GATTATGGGTAGGGAATTGA+AGG - chr2.3:14263830-14263849 MS.gene073190:CDS 40.0%
GCAATTCTTAAACCTCCTGT+TGG - chr2.3:14263582-14263601 MS.gene073190:CDS 40.0%
GTACCTTCACTCATTCTTGA+TGG + chr2.3:14263132-14263151 None:intergenic 40.0%
GTGAGAAGAAGTTCAACTTG+AGG + chr2.3:14262982-14263001 None:intergenic 40.0%
GTGATGCAATTGGGTTCAAA+GGG - chr2.3:14263313-14263332 MS.gene073190:CDS 40.0%
GTTGGAGTTGAAGTGAAGAA+GGG - chr2.3:14263852-14263871 MS.gene073190:CDS 40.0%
TCCCAGAAGGGTTTAAAGAA+AGG - chr2.3:14263628-14263647 MS.gene073190:CDS 40.0%
TCTTCTCACTCAACTAAACC+CGG - chr2.3:14262993-14263012 MS.gene073190:CDS 40.0%
TGAAGCTGTGAGAATTGTGA+TGG - chr2.3:14263911-14263930 MS.gene073190:CDS 40.0%
TGAATGTGAGGAACATTGAG+AGG + chr2.3:14262874-14262893 None:intergenic 40.0%
TGCACATAGCAATGTTTCCA+TGG - chr2.3:14262704-14262723 MS.gene073190:CDS 40.0%
TGGTAAGCCTGTTCTTCTTT+CGG - chr2.3:14263383-14263402 MS.gene073190:CDS 40.0%
TTAGGTGGTTCAGGTAAAAC+AGG + chr2.3:14263411-14263430 None:intergenic 40.0%
TTGTTAGGGCTTGAGTTAAC+AGG - chr2.3:14263546-14263565 MS.gene073190:CDS 40.0%
! AGAGATTTTGTGTCCCCTTT+TGG + chr2.3:14262779-14262798 None:intergenic 40.0%
! GATGAAATAGGGAACCCTTT+TGG + chr2.3:14263186-14263205 None:intergenic 40.0%
! GTGTTGATGCCACATTTAGA+TGG - chr2.3:14263786-14263805 MS.gene073190:CDS 40.0%
! TGAAATAGGGAACCCTTTTG+GGG + chr2.3:14263184-14263203 None:intergenic 40.0%
AAGTGTCCCATTGCAAACCA+TGG + chr2.3:14262724-14262743 None:intergenic 45.0%
ACCTCCTGTTGGGTTTGAAA+CGG - chr2.3:14263593-14263612 MS.gene073190:CDS 45.0%
ATGGGTAGGGAATTGAAGGT+TGG - chr2.3:14263834-14263853 MS.gene073190:CDS 45.0%
GAAAAATGGGGTTCTTGGCT+TGG - chr2.3:14263444-14263463 MS.gene073190:CDS 45.0%
GAAGTGGTTTCAGCACCAAA+TGG + chr2.3:14262904-14262923 None:intergenic 45.0%
GCTCCATCAAGAATGAGTGA+AGG - chr2.3:14263126-14263145 MS.gene073190:CDS 45.0%
GGTAAGCCTGTTCTTCTTTC+GGG - chr2.3:14263384-14263403 MS.gene073190:CDS 45.0%
GGTTGGAGTTGAAGTGAAGA+AGG - chr2.3:14263851-14263870 MS.gene073190:CDS 45.0%
GTGAAGAAGGGTGAAGAAGA+TGG - chr2.3:14263864-14263883 MS.gene073190:CDS 45.0%
TCCACTCATCATGACAGCTA+TGG - chr2.3:14262945-14262964 MS.gene073190:CDS 45.0%
TCCATAGCTGTCATGATGAG+TGG + chr2.3:14262949-14262968 None:intergenic 45.0%
TCGAAGATGCTTTCCCAGAA+GGG - chr2.3:14263616-14263635 MS.gene073190:CDS 45.0%
TTGTTTCGTGACACATTGCG+GGG - chr2.3:14263722-14263741 MS.gene073190:CDS 45.0%
! GAAATAGGGAACCCTTTTGG+GGG + chr2.3:14263183-14263202 None:intergenic 45.0%
! GGTTGTTTCGTGACACATTG+CGG - chr2.3:14263720-14263739 MS.gene073190:CDS 45.0%
! GTTGTTTCGTGACACATTGC+GGG - chr2.3:14263721-14263740 MS.gene073190:CDS 45.0%
!! TTCTTGGCTTGGAGGATTCA+AGG - chr2.3:14263455-14263474 MS.gene073190:CDS 45.0%
ACAGGTCCCGAAAGAAGAAC+AGG + chr2.3:14263393-14263412 None:intergenic 50.0%
ACCGTTTCAAACCCAACAGG+AGG + chr2.3:14263597-14263616 None:intergenic 50.0%
GTCGAAGATGCTTTCCCAGA+AGG - chr2.3:14263615-14263634 MS.gene073190:CDS 50.0%
TCGACCGTTTCAAACCCAAC+AGG + chr2.3:14263600-14263619 None:intergenic 50.0%
! TGGCTTGGAGGATTCAAGGA+TGG - chr2.3:14263459-14263478 MS.gene073190:CDS 50.0%
!! AAATGGGGTTCTTGGCTTGG+AGG - chr2.3:14263447-14263466 MS.gene073190:CDS 50.0%
GGGCAGGTTCATTGACAGAG+GGG - chr2.3:14263742-14263761 MS.gene073190:CDS 55.0%
GGGGCAGGTTCATTGACAGA+GGG - chr2.3:14263741-14263760 MS.gene073190:CDS 55.0%
CGGGGCAGGTTCATTGACAG+AGG - chr2.3:14263740-14263759 MS.gene073190:CDS 60.0%
TTCGTGACACATTGCGGGGC+AGG - chr2.3:14263726-14263745 MS.gene073190:CDS 60.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 14262685 14264064 14262685 ID=MS.gene073190
chr2.3 mRNA 14262685 14264064 14262685 ID=MS.gene073190.t1;Parent=MS.gene073190
chr2.3 exon 14262685 14264064 14262685 ID=MS.gene073190.t1.exon1;Parent=MS.gene073190.t1
chr2.3 CDS 14262685 14264064 14262685 ID=cds.MS.gene073190.t1;Parent=MS.gene073190.t1
Gene Sequence

>MS.gene073190

ATGGATTCACCATCTTCTTTGCACATAGCAATGTTTCCATGGTTTGCAATGGGACACTTAACTCCATATCTTCATCTCTCTAACAAATTAGCCAAAAGGGGACACAAAATCTCTTTCTTCATCCCCAAGAAAACACAAACCAAGTTAGAACAATTCAACCTTTTTCCAAATTTAATCACTTTTTACCCTCTCAATGTTCCTCACATTCATGGTCTTCCATTTGGTGCTGAAACCACTTCAGATGTTTCTTTCTCTTTAGGTCCACTCATCATGACAGCTATGGATCAAACACAGCCTCAAGTTGAACTTCTTCTCACTCAACTAAACCCGGATATTGTTTTCTTTGATTTCACCTTTTGGTTACCAAAAATTGCTCATAATTTAGGAATAAAGTCTTTGCAATACTGGATTGTTAGTCCAGCAACAGTTTCATATAATGCAGCTCCATCAAGAATGAGTGAAGGTACAAACTTGACTGAATTTGATATTATGAAACCCCCAAAAGGGTTCCCTATTTCATCCTTTAATCTTTATTCTCATGAAGCAAAGCACCTTGCTTTAAAAAGAAAATTGGAATTTGGAAGTGGGATTTTTTTCTATGATAGGATCTATAATGGTTTAAGCTTAAGTGATGCAATTGGGTTCAAAGGGTGTAGAGAAATTGAAGGGCCTTATGTTGATTACATAGAACAAGAATTTGGTAAGCCTGTTCTTCTTTCGGGACCTGTTTTACCTGAACCACCTAAAACTGTTTTAGATGAAAAATGGGGTTCTTGGCTTGGAGGATTCAAGGATGGTTCATTAGTTTATTGTGCACTTGGAAGTGAATCTAAATTATCACAAAAGCAGTTTCATGAATTGTTGTTAGGGCTTGAGTTAACAGGTTATCCATTTTTGGCAATTCTTAAACCTCCTGTTGGGTTTGAAACGGTCGAAGATGCTTTCCCAGAAGGGTTTAAAGAAAGGGTTAAGGAAAAAGGTATTGTTCATAGTGGATGGATACAGCAGCAATTAATTTTGGAACATTCGTCTGTTGGTTGTTTCGTGACACATTGCGGGGCAGGTTCATTGACAGAGGGGTTGATAAATAATTGTCAGATCGTGTTGATGCCACATTTAGATGGTGATCATATCACTAATACTAAGATTATGGGTAGGGAATTGAAGGTTGGAGTTGAAGTGAAGAAGGGTGAAGAAGATGGATTGTTCACTAAGGAAAGTGTTTCTGAAGCTGTGAGAATTGTGATGGATGATGAAAATGAGATTGGCAGAGAAGTTAGGAGTAATCATGATAAACTGAGAAACCTCTTATTAAACCAAGATTTGGAGTCATTCTATGTTGATGGTTTCTGTGAAAAGCTTCGAGAATTAGTAAGGTGA

Protein sequence

>MS.gene073190.t1

MDSPSSLHIAMFPWFAMGHLTPYLHLSNKLAKRGHKISFFIPKKTQTKLEQFNLFPNLITFYPLNVPHIHGLPFGAETTSDVSFSLGPLIMTAMDQTQPQVELLLTQLNPDIVFFDFTFWLPKIAHNLGIKSLQYWIVSPATVSYNAAPSRMSEGTNLTEFDIMKPPKGFPISSFNLYSHEAKHLALKRKLEFGSGIFFYDRIYNGLSLSDAIGFKGCREIEGPYVDYIEQEFGKPVLLSGPVLPEPPKTVLDEKWGSWLGGFKDGSLVYCALGSESKLSQKQFHELLLGLELTGYPFLAILKPPVGFETVEDAFPEGFKERVKEKGIVHSGWIQQQLILEHSSVGCFVTHCGAGSLTEGLINNCQIVLMPHLDGDHITNTKIMGRELKVGVEVKKGEEDGLFTKESVSEAVRIVMDDENEIGREVRSNHDKLRNLLLNQDLESFYVDGFCEKLRELVR