AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene69840

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69840.t1 MTR_2g083490 93.246 459 31 0 1 459 1 459 0.0 860
MS.gene69840.t1 MTR_2g083380 90.850 459 42 0 1 459 18 476 0.0 843
MS.gene69840.t1 MTR_2g083430 69.912 452 136 0 7 458 7 458 0.0 637
MS.gene69840.t1 MTR_2g083480 66.083 457 155 0 1 457 1 457 0.0 632
MS.gene69840.t1 MTR_4g079270 61.605 461 173 3 1 459 1 459 0.0 600
MS.gene69840.t1 MTR_2g083390 63.319 458 144 1 1 458 1 434 0.0 599
MS.gene69840.t1 MTR_4g079250 61.304 460 174 3 1 458 1 458 0.0 599
MS.gene69840.t1 MTR_2g083420 62.445 458 148 1 1 458 1 434 0.0 595
MS.gene69840.t1 MTR_2g014900 56.798 456 196 1 4 459 3 457 0.0 545
MS.gene69840.t1 MTR_2g086283 65.479 449 43 5 11 459 1 337 0.0 544
MS.gene69840.t1 MTR_2g083360 50.000 452 121 4 7 458 28 374 7.27e-145 419
MS.gene69840.t1 MTR_1g090270 42.424 462 246 11 7 458 14 465 2.93e-121 362
MS.gene69840.t1 MTR_4g059370 40.510 353 177 9 131 458 48 392 5.54e-84 264
MS.gene69840.t1 MTR_8g068330 32.773 476 284 15 1 455 1 461 1.15e-69 229
MS.gene69840.t1 MTR_2g008225 32.553 470 284 12 2 454 9 462 1.12e-66 221
MS.gene69840.t1 MTR_8g068360 32.075 477 291 15 2 459 6 468 2.31e-65 218
MS.gene69840.t1 MTR_2g008220 32.766 470 283 13 2 454 8 461 2.85e-65 218
MS.gene69840.t1 MTR_7g067330 32.762 467 258 15 2 455 3 426 5.78e-64 213
MS.gene69840.t1 MTR_4g079280 46.053 228 78 2 11 238 1 183 1.95e-63 203
MS.gene69840.t1 MTR_6g036650 31.405 484 279 13 1 456 11 469 1.38e-61 208
MS.gene69840.t1 MTR_8g068340 30.213 470 302 13 2 455 6 465 6.15e-61 206
MS.gene69840.t1 MTR_4g123553 32.558 473 269 16 7 456 14 459 6.52e-61 206
MS.gene69840.t1 MTR_2g008226 32.845 478 273 20 7 455 9 467 6.84e-60 203
MS.gene69840.t1 MTR_7g067120 32.618 466 260 16 2 455 3 426 7.73e-60 202
MS.gene69840.t1 MTR_6g042310 31.780 472 282 15 4 457 14 463 1.35e-59 202
MS.gene69840.t1 MTR_2g046620 31.356 472 276 16 7 456 15 460 2.23e-58 199
MS.gene69840.t1 MTR_2g014930 39.100 289 96 5 17 305 9 217 7.07e-55 183
MS.gene69840.t1 MTR_4g077960 30.603 464 270 14 17 456 1 436 1.18e-51 181
MS.gene69840.t1 MTR_8g007650 30.998 471 300 11 6 459 5 467 1.29e-51 181
MS.gene69840.t1 MTR_8g007565 30.786 471 301 11 6 459 5 467 8.67e-51 179
MS.gene69840.t1 MTR_5g066410 30.426 470 279 12 11 459 1 443 1.14e-49 175
MS.gene69840.t1 MTR_3g435310 29.476 458 259 12 7 456 17 418 1.79e-49 174
MS.gene69840.t1 MTR_2g083440 64.706 102 36 0 357 458 11 112 1.10e-44 152
MS.gene69840.t1 MTR_1g090280 42.391 184 101 3 279 458 133 315 3.45e-44 157
MS.gene69840.t1 MTR_8g071070 27.140 479 312 15 5 457 4 471 7.26e-37 141
MS.gene69840.t1 MTR_8g009050 28.755 466 268 17 6 434 4 442 2.68e-32 128
MS.gene69840.t1 MTR_0009s0240 26.971 482 294 20 5 458 4 455 6.37e-32 127
MS.gene69840.t1 MTR_8g066610 26.483 472 294 15 1 436 1 455 9.96e-32 127
MS.gene69840.t1 MTR_8g009055 26.407 462 284 16 6 434 4 442 1.64e-30 123
MS.gene69840.t1 MTR_1g062380 26.490 453 283 16 5 418 13 454 2.22e-30 123
MS.gene69840.t1 MTR_4g485620 26.786 448 281 13 20 436 1 432 1.45e-29 120
MS.gene69840.t1 MTR_8g466240 27.273 484 297 19 1 457 1 456 1.66e-29 120
MS.gene69840.t1 MTR_8g008990 26.509 464 283 16 6 434 4 444 6.01e-29 119
MS.gene69840.t1 MTR_7g070660 25.055 455 284 15 5 421 8 443 6.68e-29 119
MS.gene69840.t1 MTR_8g009073 29.764 467 260 22 6 434 4 440 1.16e-28 118
MS.gene69840.t1 MTR_4g031800 25.806 465 284 18 7 434 8 448 2.66e-28 117
MS.gene69840.t1 MTR_7g117405 27.983 461 286 19 8 436 12 458 4.87e-28 116
MS.gene69840.t1 MTR_7g070740 24.573 468 297 14 5 433 8 458 5.39e-28 116
MS.gene69840.t1 MTR_2g098430 24.843 479 287 16 4 437 2 452 5.97e-28 116
MS.gene69840.t1 MTR_7g102450 26.797 459 286 16 8 436 11 449 9.33e-28 115
MS.gene69840.t1 MTR_4g117950 25.364 481 295 15 7 448 5 460 1.20e-27 115
MS.gene69840.t1 MTR_5g045970 27.119 472 290 16 5 436 13 470 1.99e-27 115
MS.gene69840.t1 MTR_6g038240 25.942 451 283 17 8 436 11 432 4.72e-27 113
MS.gene69840.t1 MTR_7g013220 24.691 486 263 18 8 444 5 436 8.60e-27 112
MS.gene69840.t1 MTR_8g006710 25.893 448 287 16 9 427 7 438 1.08e-26 112
MS.gene69840.t1 MTR_5g087620 25.690 471 289 18 8 433 10 464 1.68e-26 112
MS.gene69840.t1 MTR_2g059240 27.361 413 264 10 8 397 13 412 2.54e-26 111
MS.gene69840.t1 MTR_6g038220 25.934 455 283 17 8 439 11 434 2.76e-26 111
MS.gene69840.t1 MTR_7g070810 25.901 444 288 13 7 421 8 439 3.21e-26 111
MS.gene69840.t1 MTR_7g102560 26.383 470 296 14 4 436 5 461 3.42e-26 111
MS.gene69840.t1 MTR_5g035580 26.087 460 274 17 5 436 10 431 4.25e-26 110
MS.gene69840.t1 MTR_6g038200 26.327 452 280 17 8 436 11 432 5.21e-26 110
MS.gene69840.t1 MTR_8g009073 33.871 248 139 9 202 434 74 311 6.03e-26 108
MS.gene69840.t1 MTR_8g009063 26.566 463 283 17 6 436 11 448 7.22e-26 110
MS.gene69840.t1 MTR_5g035560 25.210 476 298 17 5 454 8 451 1.34e-25 109
MS.gene69840.t1 MTR_6g038230 26.535 456 280 18 8 439 11 435 1.57e-25 108
MS.gene69840.t1 MTR_0078s0010 25.988 481 292 16 4 449 2 453 1.76e-25 108
MS.gene69840.t1 MTR_7g070940 23.747 459 305 13 4 433 5 447 2.28e-25 108
MS.gene69840.t1 MTR_8g088560 26.708 483 293 19 5 456 7 459 2.64e-25 108
MS.gene69840.t1 MTR_7g013180 25.463 432 279 15 8 419 5 413 3.18e-25 107
MS.gene69840.t1 MTR_7g071040 24.576 472 293 15 5 433 14 465 3.24e-25 108
MS.gene69840.t1 MTR_8g027885 26.395 466 304 16 9 452 19 467 4.48e-25 107
MS.gene69840.t1 MTR_8g027870 25.536 466 308 15 9 452 19 467 5.51e-25 107
MS.gene69840.t1 MTR_7g117170 26.464 461 279 18 9 434 16 451 6.65e-25 107
MS.gene69840.t1 MTR_8g465670 25.556 450 300 13 9 434 8 446 1.03e-24 106
MS.gene69840.t1 MTR_8g009067 27.273 462 278 17 6 434 4 440 1.12e-24 106
MS.gene69840.t1 MTR_8g077590 29.464 336 192 8 112 428 115 424 1.26e-24 106
MS.gene69840.t1 MTR_7g070800 25.000 468 292 17 5 433 3 450 1.31e-24 106
MS.gene69840.t1 MTR_7g013200 24.622 463 272 16 8 437 5 423 1.42e-24 105
MS.gene69840.t1 MTR_7g055710 24.145 468 299 15 5 433 8 458 1.52e-24 106
MS.gene69840.t1 MTR_8g006730 23.556 450 306 13 8 431 6 443 1.78e-24 105
MS.gene69840.t1 MTR_0184s0030 26.754 456 280 16 4 425 2 437 2.36e-24 105
MS.gene69840.t1 MTR_0184s0040 26.737 475 271 18 4 435 17 457 2.80e-24 105
MS.gene69840.t1 MTR_0078s0190 26.737 475 271 18 4 435 17 457 2.80e-24 105
MS.gene69840.t1 MTR_4g485590 26.650 409 242 13 8 394 9 381 3.21e-24 104
MS.gene69840.t1 MTR_7g070610 24.426 479 285 14 5 433 10 461 6.81e-24 104
MS.gene69840.t1 MTR_7g047030 26.609 466 281 17 4 434 2 441 6.84e-24 104
MS.gene69840.t1 MTR_7g047270 26.609 466 281 17 4 434 2 441 6.84e-24 104
MS.gene69840.t1 MTR_8g012635 28.571 406 230 16 66 435 67 448 7.51e-24 104
MS.gene69840.t1 MTR_3g009510 31.507 219 127 6 236 436 241 454 7.78e-24 104
MS.gene69840.t1 MTR_0078s0060 25.696 467 285 15 4 435 2 441 9.97e-24 103
MS.gene69840.t1 MTR_6g033615 34.884 172 106 4 258 427 252 419 1.07e-23 103
MS.gene69840.t1 MTR_7g102550 25.103 486 308 18 8 452 9 479 1.29e-23 103
MS.gene69840.t1 MTR_6g023665 23.992 471 324 13 9 456 14 473 1.45e-23 103
MS.gene69840.t1 MTR_6g005600 27.711 332 208 7 123 434 124 443 1.73e-23 103
MS.gene69840.t1 MTR_6g038300 24.838 463 274 19 8 436 11 433 2.21e-23 102
MS.gene69840.t1 MTR_6g488280 24.270 445 297 13 9 427 7 437 2.57e-23 102
MS.gene69840.t1 MTR_0428s0010 24.270 445 297 13 9 427 7 437 2.57e-23 102
MS.gene69840.t1 MTR_7g102460 27.115 461 278 19 2 421 5 448 2.64e-23 102
MS.gene69840.t1 MTR_0536s0020 25.536 466 290 17 6 435 16 460 2.80e-23 102
MS.gene69840.t1 MTR_4g024020 25.420 476 298 15 1 436 4 462 2.98e-23 102
MS.gene69840.t1 MTR_8g006220 25.164 457 301 12 9 434 7 453 3.84e-23 102
MS.gene69840.t1 MTR_4g485630 25.974 462 289 17 7 433 8 451 4.61e-23 102
MS.gene69840.t1 MTR_8g009067 29.305 331 198 11 125 434 7 322 4.86e-23 100
MS.gene69840.t1 MTR_7g070780 23.667 469 296 15 7 433 10 458 5.71e-23 101
MS.gene69840.t1 MTR_7g102490 25.602 457 292 17 2 421 5 450 5.80e-23 101
MS.gene69840.t1 MTR_0536s0010 25.000 444 281 14 7 421 20 440 8.37e-23 101
MS.gene69840.t1 MTR_8g012650 28.205 351 210 12 112 435 113 448 8.88e-23 100
MS.gene69840.t1 MTR_8g006270 28.863 343 212 12 117 437 114 446 1.29e-22 100
MS.gene69840.t1 MTR_7g070930 23.333 480 289 15 5 433 11 462 1.29e-22 100
MS.gene69840.t1 MTR_6g033675 27.647 340 220 11 109 434 113 440 1.40e-22 100
MS.gene69840.t1 MTR_6g033725 35.754 179 109 4 258 434 263 437 1.73e-22 100
MS.gene69840.t1 MTR_5g045960 25.253 495 271 19 4 436 5 462 1.84e-22 100
MS.gene69840.t1 MTR_5g039900 24.138 493 315 17 4 458 9 480 3.78e-22 99.4
MS.gene69840.t1 MTR_6g035265 24.729 461 297 17 7 434 10 453 5.12e-22 99.0
MS.gene69840.t1 MTR_3g049970 23.941 472 281 15 7 434 8 445 5.24e-22 99.0
MS.gene69840.t1 MTR_6g033625 34.302 172 107 4 258 427 266 433 5.52e-22 98.6
MS.gene69840.t1 MTR_5g016660 23.427 461 288 15 12 427 14 454 6.28e-22 98.6
MS.gene69840.t1 MTR_7g102520 26.141 482 282 19 5 436 9 466 6.67e-22 98.6
MS.gene69840.t1 MTR_3g079480 24.454 458 287 14 8 427 21 457 6.86e-22 98.6
MS.gene69840.t1 MTR_2g034990 24.078 461 302 17 7 438 10 451 7.08e-22 98.6
MS.gene69840.t1 MTR_4g117980 24.062 453 289 15 7 421 10 445 7.48e-22 98.6
MS.gene69840.t1 MTR_8g083280 24.898 490 293 20 8 449 7 469 9.91e-22 97.8
MS.gene69840.t1 MTR_4g117890 24.390 451 283 18 6 421 11 438 1.06e-21 97.8
MS.gene69840.t1 MTR_8g008970 26.293 464 280 18 6 434 4 440 1.92e-21 98.2
MS.gene69840.t1 MTR_8g008970 29.237 236 151 8 207 436 541 766 5.71e-14 74.7
MS.gene69840.t1 MTR_4g485640 30.901 233 136 7 220 428 409 640 2.03e-21 97.8
MS.gene69840.t1 MTR_8g006260 24.561 456 289 16 8 427 6 442 2.15e-21 97.1
MS.gene69840.t1 MTR_4g117960 25.109 458 287 18 1 421 6 444 2.72e-21 96.7
MS.gene69840.t1 MTR_1g019510 24.619 459 293 16 6 434 4 439 2.91e-21 96.7
MS.gene69840.t1 MTR_1g107315 25.959 443 270 15 1 408 1 420 3.07e-21 96.7
MS.gene69840.t1 MTR_7g070870 24.444 405 276 12 7 394 18 409 3.28e-21 96.3
MS.gene69840.t1 MTR_4g082820 25.761 493 289 19 7 459 6 461 3.51e-21 96.3
MS.gene69840.t1 MTR_5g027210 25.911 247 150 3 212 426 212 457 4.34e-21 95.9
MS.gene69840.t1 MTR_1g107350 24.370 476 286 19 1 434 1 444 4.34e-21 95.9
MS.gene69840.t1 MTR_8g032950 22.391 460 301 17 7 429 11 451 5.37e-21 95.9
MS.gene69840.t1 MTR_7g046490 30.453 243 147 8 209 435 204 440 7.99e-21 95.1
MS.gene69840.t1 MTR_4g082810 25.943 424 234 13 7 384 6 395 8.24e-21 94.7
MS.gene69840.t1 MTR_7g070910 23.285 481 288 17 5 433 8 459 9.39e-21 95.1
MS.gene69840.t1 MTR_6g033660 34.831 178 110 4 259 434 266 439 1.06e-20 94.7
MS.gene69840.t1 MTR_8g012730 33.508 191 109 4 259 435 99 285 1.33e-20 92.4
MS.gene69840.t1 MTR_3g479520 24.229 454 295 14 8 428 15 452 1.46e-20 94.4
MS.gene69840.t1 MTR_8g064880 25.986 431 250 14 7 394 8 412 1.66e-20 94.4
MS.gene69840.t1 MTR_2g046820 31.915 235 143 7 236 459 236 464 1.77e-20 94.0
MS.gene69840.t1 MTR_7g013240 23.776 429 283 16 8 420 6 406 2.13e-20 93.6
MS.gene69840.t1 MTR_7g013260 23.953 430 282 17 8 420 6 407 2.58e-20 93.6
MS.gene69840.t1 MTR_3g069690 29.333 225 141 6 220 434 209 425 2.85e-20 93.6
MS.gene69840.t1 MTR_8g044140 24.939 409 249 12 46 416 19 407 2.89e-20 93.6
MS.gene69840.t1 MTR_8g064870 26.168 428 263 13 7 401 10 417 2.89e-20 93.6
MS.gene69840.t1 MTR_6g035185 23.028 469 296 17 7 433 12 457 3.39e-20 93.6
MS.gene69840.t1 MTR_4g108250 22.785 474 302 15 5 433 8 462 4.14e-20 93.2
MS.gene69840.t1 MTR_5g040030 23.975 488 305 18 4 449 10 473 5.46e-20 92.8
MS.gene69840.t1 MTR_1g019520 31.915 188 113 4 258 434 5 188 5.99e-20 88.6
MS.gene69840.t1 MTR_7g070860 23.769 467 287 16 4 433 3 437 7.68e-20 92.4
MS.gene69840.t1 MTR_3g009490 32.934 167 96 4 283 436 3 166 1.10e-19 87.0
MS.gene69840.t1 MTR_5g072860 23.297 455 300 15 8 439 18 446 1.60e-19 91.3
MS.gene69840.t1 MTR_7g080935 24.086 465 284 17 4 438 7 432 2.14e-19 90.9
MS.gene69840.t1 MTR_7g012120 24.503 453 284 19 7 421 15 447 2.88e-19 90.5
MS.gene69840.t1 MTR_8g083290 24.524 473 278 19 8 436 4 441 2.94e-19 90.5
MS.gene69840.t1 MTR_8g074550 24.124 485 296 16 1 434 1 464 3.00e-19 90.5
MS.gene69840.t1 MTR_1g032490 25.517 435 270 17 7 408 9 422 3.02e-19 90.5
MS.gene69840.t1 MTR_8g012630 31.937 191 112 4 259 435 206 392 3.25e-19 89.7
MS.gene69840.t1 MTR_3g084520 23.493 481 288 16 4 436 2 450 5.65e-19 89.7
MS.gene69840.t1 MTR_2g046750 31.915 235 143 8 236 459 239 467 7.88e-19 89.0
MS.gene69840.t1 MTR_3g084540 23.207 474 299 16 4 436 2 451 8.55e-19 89.0
MS.gene69840.t1 MTR_8g012745 31.019 216 127 8 237 436 237 446 1.05e-18 89.0
MS.gene69840.t1 MTR_5g019580 31.308 214 122 6 238 427 261 473 1.28e-18 88.6
MS.gene69840.t1 MTR_2g040530 29.858 211 133 5 259 459 261 466 1.34e-18 88.6
MS.gene69840.t1 MTR_5g019580 31.308 214 122 6 238 427 237 449 1.41e-18 88.6
MS.gene69840.t1 MTR_4g118000 24.091 440 281 17 7 417 11 426 1.59e-18 88.2
MS.gene69840.t1 MTR_3g479490 24.540 489 315 19 7 459 5 475 1.87e-18 88.2
MS.gene69840.t1 MTR_7g470610 34.356 163 102 4 253 413 128 287 2.42e-18 85.5
MS.gene69840.t1 MTR_7g070583 34.356 163 102 4 253 413 128 287 2.42e-18 85.5
MS.gene69840.t1 MTR_1g107365 31.088 193 109 5 220 399 254 435 2.92e-18 87.4
MS.gene69840.t1 MTR_4g128690 26.728 434 277 16 1 419 8 415 3.09e-18 87.0
MS.gene69840.t1 MTR_5g029800 31.088 193 114 5 258 436 265 452 3.83e-18 87.0
MS.gene69840.t1 MTR_1g029540 23.831 449 289 15 13 437 19 438 5.56e-18 86.7
MS.gene69840.t1 MTR_7g080940 27.711 249 154 8 204 438 196 432 6.55e-18 86.3
MS.gene69840.t1 MTR_6g035295 23.967 484 309 18 4 449 8 470 7.23e-18 86.3
MS.gene69840.t1 MTR_8g090095 28.279 244 159 6 209 438 218 459 9.01e-18 85.9
MS.gene69840.t1 MTR_7g080950 32.609 184 113 6 253 436 253 425 1.20e-17 85.5
MS.gene69840.t1 MTR_4g008630 28.216 241 158 6 209 437 204 441 1.53e-17 85.1
MS.gene69840.t1 MTR_5g098960 30.198 202 122 8 259 456 262 448 2.62e-17 84.3
MS.gene69840.t1 MTR_2g035020 22.545 448 302 15 7 421 10 445 2.84e-17 84.3
MS.gene69840.t1 MTR_5g067170 30.052 193 116 5 258 436 267 454 3.11e-17 84.3
MS.gene69840.t1 MTR_4g094920 29.469 207 132 8 259 458 281 480 5.51e-17 83.6
MS.gene69840.t1 MTR_2g035040 29.319 191 116 5 258 434 174 359 5.73e-17 82.8
MS.gene69840.t1 MTR_0288s0020 28.870 239 151 7 197 429 217 442 9.10e-17 82.8
MS.gene69840.t1 MTR_1g107380 23.602 483 293 21 7 449 12 458 9.15e-17 82.8
MS.gene69840.t1 MTR_6g013440 25.216 464 292 18 8 434 11 456 1.11e-16 82.8
MS.gene69840.t1 MTR_1g040310 22.517 453 284 14 7 416 14 442 1.61e-16 82.0
MS.gene69840.t1 MTR_5g075440 23.848 369 242 13 90 439 88 436 1.89e-16 81.6
MS.gene69840.t1 MTR_3g069710 29.508 244 149 7 202 432 196 429 1.90e-16 81.6
MS.gene69840.t1 MTR_5g090630 24.026 462 303 17 8 438 5 449 2.40e-16 81.6
MS.gene69840.t1 MTR_6g014170 29.592 196 124 6 253 446 266 449 2.93e-16 81.3
MS.gene69840.t1 MTR_6g013920 29.327 208 125 6 253 443 283 485 3.09e-16 81.3
MS.gene69840.t1 MTR_5g464810 24.590 427 276 15 8 400 12 426 3.67e-16 80.9
MS.gene69840.t1 MTR_5g064240 24.590 427 276 15 8 400 12 426 3.67e-16 80.9
MS.gene69840.t1 MTR_1g107375 31.771 192 110 5 220 399 215 397 3.79e-16 80.9
MS.gene69840.t1 MTR_0891s0010 28.824 170 112 4 259 428 99 259 4.08e-16 79.0
MS.gene69840.t1 MTR_3g084530 29.319 191 122 5 253 436 266 450 4.28e-16 80.9
MS.gene69840.t1 MTR_6g011340 29.167 240 143 9 210 429 229 461 4.34e-16 80.9
MS.gene69840.t1 MTR_4g095008 31.707 164 103 6 259 417 266 425 4.53e-16 80.9
MS.gene69840.t1 MTR_6g014020 30.899 178 109 6 253 426 284 451 5.63e-16 80.5
MS.gene69840.t1 MTR_6g014200 30.978 184 113 6 253 434 281 452 5.95e-16 80.5
MS.gene69840.t1 MTR_5g016480 31.579 171 109 6 259 427 275 439 6.45e-16 80.1
MS.gene69840.t1 MTR_6g014190 29.508 183 118 5 253 429 91 268 7.25e-16 78.2
MS.gene69840.t1 MTR_6g013900 29.612 206 123 6 253 441 283 483 7.81e-16 80.1
MS.gene69840.t1 MTR_7g080900 24.675 462 279 19 6 436 10 433 8.05e-16 79.7
MS.gene69840.t1 MTR_3g479610 29.586 169 110 4 259 427 122 281 1.17e-15 78.2
MS.gene69840.t1 MTR_3g031400 22.545 448 290 15 8 436 18 427 1.44e-15 79.0
MS.gene69840.t1 MTR_8g056740 27.149 221 147 5 220 430 121 337 1.62e-15 78.6
MS.gene69840.t1 MTR_1g107360 28.856 201 123 5 219 408 222 413 1.92e-15 78.6
MS.gene69840.t1 MTR_0036s0220 23.894 452 294 16 8 427 12 445 2.56e-15 78.6
MS.gene69840.t1 MTR_7g011470 26.490 453 282 18 8 434 10 437 3.27e-15 78.2
MS.gene69840.t1 MTR_7g011470 30.435 184 114 6 253 434 270 441 3.60e-15 77.8
MS.gene69840.t1 MTR_3g031450 21.670 443 284 14 8 427 18 420 4.65e-15 77.4
MS.gene69840.t1 MTR_8g007585 30.337 178 110 6 259 434 202 367 5.02e-15 77.0
MS.gene69840.t1 MTR_5g090620 26.766 269 163 9 199 438 196 459 8.81e-15 76.6
MS.gene69840.t1 MTR_6g014270 23.832 428 278 15 5 394 4 421 9.46e-15 76.6
MS.gene69840.t1 MTR_5g090670 23.125 480 294 18 9 438 6 460 1.04e-14 76.6
MS.gene69840.t1 MTR_3g008010 31.176 170 104 6 259 425 288 447 1.19e-14 76.3
MS.gene69840.t1 MTR_2g008210 29.412 170 111 5 259 427 284 445 1.69e-14 75.9
MS.gene69840.t1 MTR_7g039550 28.968 252 148 8 220 449 5 247 1.70e-14 73.9
MS.gene69840.t1 MTR_6g014220 29.379 177 114 5 259 429 288 459 1.97e-14 75.5
MS.gene69840.t1 MTR_6g013990 28.108 185 117 6 253 434 282 453 2.64e-14 75.1
MS.gene69840.t1 MTR_6g013450 28.962 183 119 5 253 429 285 462 2.91e-14 75.1
MS.gene69840.t1 MTR_6g014250 28.495 186 119 6 253 436 282 455 3.74e-14 74.7
MS.gene69840.t1 MTR_6g014150 31.250 144 92 4 253 394 281 419 5.08e-14 74.3
MS.gene69840.t1 MTR_5g058320 31.176 170 105 5 253 420 269 428 5.19e-14 74.3
MS.gene69840.t1 MTR_5g004940 28.571 196 116 6 253 434 193 378 6.48e-14 73.6
MS.gene69840.t1 MTR_6g014240 29.714 175 111 5 223 395 226 390 6.69e-14 73.9
MS.gene69840.t1 MTR_6g078320 24.160 476 277 16 8 425 11 460 6.80e-14 73.9
MS.gene69840.t1 MTR_6g014290 32.639 144 90 4 253 394 282 420 8.12e-14 73.6
MS.gene69840.t1 MTR_6g014187 29.348 184 116 6 253 434 284 455 1.48e-13 72.8
MS.gene69840.t1 MTR_5g090580 25.843 267 166 7 199 438 197 458 1.84e-13 72.8
MS.gene69840.t1 MTR_6g014040 31.944 144 91 4 253 394 285 423 3.34e-13 72.0
MS.gene69840.t1 MTR_5g072830 25.664 226 146 5 219 434 211 424 5.16e-13 71.2
MS.gene69840.t1 MTR_4g064987 23.457 486 286 23 8 459 8 441 1.10e-12 70.1
MS.gene69840.t1 MTR_6g013960 30.556 144 93 4 253 394 284 422 3.31e-12 68.6
MS.gene69840.t1 MTR_4g064987 23.171 492 286 22 8 459 8 447 4.83e-12 68.2
MS.gene69840.t1 MTR_5g072850 27.103 214 129 7 215 422 162 354 5.03e-12 67.8
MS.gene69840.t1 MTR_8g009840 26.147 218 139 5 262 459 315 530 5.68e-12 68.2
MS.gene69840.t1 MTR_6g014300 25.949 158 103 6 279 434 296 441 1.20e-11 67.0
MS.gene69840.t1 MTR_5g070040 29.412 187 120 7 259 438 269 450 1.57e-11 66.6
MS.gene69840.t1 MTR_0536s0030 32.331 133 76 4 315 434 200 331 1.75e-11 65.9
MS.gene69840.t1 MTR_5g090600 22.658 459 299 16 9 438 6 437 3.07e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69840.t1 AT5G54010 47.921 457 227 5 4 459 2 448 7.46e-155 447
MS.gene69840.t1 AT4G27570 48.246 456 218 6 7 458 6 447 3.77e-151 437
MS.gene69840.t1 AT5G53990 47.826 460 215 7 4 458 2 441 3.91e-151 437
MS.gene69840.t1 AT4G27560 47.588 456 221 6 7 458 6 447 4.21e-147 427
MS.gene69840.t1 AT1G64910 46.930 456 225 6 4 458 2 441 1.21e-146 426
MS.gene69840.t1 AT2G22930 47.289 461 216 7 1 456 1 439 3.83e-146 424
MS.gene69840.t1 AT5G54060 47.629 464 230 7 4 459 9 467 5.61e-145 422
MS.gene69840.t1 AT1G64920 47.059 459 220 7 7 459 5 446 7.85e-143 416
MS.gene69840.t1 AT4G09500 45.770 461 223 8 1 456 1 439 3.09e-140 409
MS.gene69840.t1 AT3G29630 44.956 456 231 5 4 455 2 441 1.83e-139 408
MS.gene69840.t1 AT1G50580 43.516 455 237 5 4 455 2 439 1.90e-134 395
MS.gene69840.t1 AT3G29630 44.150 453 213 6 4 455 2 415 1.53e-131 387
MS.gene69840.t1 AT4G09500 43.913 460 208 9 1 456 1 414 2.05e-127 376
MS.gene69840.t1 AT5G49690 33.550 462 277 10 7 459 9 449 2.18e-69 228
MS.gene69840.t1 AT2G22590 33.978 465 284 15 4 454 11 466 3.70e-68 225
MS.gene69840.t1 AT5G65550 31.144 472 293 16 2 455 3 460 3.27e-63 212
MS.gene69840.t1 AT2G22930 43.725 247 112 5 1 240 1 227 1.17e-60 200
MS.gene69840.t1 AT2G22930 45.238 84 45 1 373 456 205 287 3.86e-16 79.3
MS.gene69840.t1 AT5G03490 28.266 467 295 13 8 459 19 460 8.70e-42 154
MS.gene69840.t1 AT1G51210 27.416 445 272 13 8 433 20 432 2.61e-36 139
MS.gene69840.t1 AT2G15490 27.706 462 274 16 7 427 6 448 1.48e-33 132
MS.gene69840.t1 AT2G15490 27.742 465 273 17 7 427 6 451 1.55e-33 132
MS.gene69840.t1 AT5G12890 26.471 476 300 16 6 449 8 465 4.82e-33 130
MS.gene69840.t1 AT4G34138 27.642 492 295 15 4 456 7 476 1.20e-32 129
MS.gene69840.t1 AT1G73880 27.685 419 262 14 5 399 11 412 1.45e-32 129
MS.gene69840.t1 AT1G05675 27.273 462 266 18 8 436 6 430 2.16e-32 128
MS.gene69840.t1 AT1G05680 27.253 455 275 19 8 436 6 430 2.27e-32 128
MS.gene69840.t1 AT2G36770 28.540 459 280 17 7 427 13 461 5.17e-32 128
MS.gene69840.t1 AT4G34131 27.140 479 301 18 2 449 4 465 6.34e-32 127
MS.gene69840.t1 AT2G15480 26.875 480 290 18 4 442 6 465 2.26e-31 126
MS.gene69840.t1 AT2G15480 26.940 464 279 17 4 426 6 450 1.22e-30 124
MS.gene69840.t1 AT2G36750 28.294 463 289 18 7 436 9 461 3.69e-30 122
MS.gene69840.t1 AT2G31790 27.155 464 280 15 1 436 1 434 1.23e-29 120
MS.gene69840.t1 AT2G36780 29.067 461 277 18 6 427 12 461 1.74e-29 120
MS.gene69840.t1 AT4G34135 26.608 451 271 16 7 416 10 441 8.67e-29 119
MS.gene69840.t1 AT2G16890 27.394 449 279 20 8 429 9 437 2.31e-28 117
MS.gene69840.t1 AT4G36770 26.981 467 274 18 7 435 3 440 5.65e-28 116
MS.gene69840.t1 AT2G36760 27.922 462 293 17 7 436 13 466 1.47e-27 115
MS.gene69840.t1 AT3G53150 25.895 475 302 15 4 436 18 484 1.66e-27 115
MS.gene69840.t1 AT2G36800 26.667 465 296 19 4 431 8 464 8.57e-27 113
MS.gene69840.t1 AT2G18560 29.752 242 155 4 207 434 112 352 1.87e-26 110
MS.gene69840.t1 AT5G14860 26.724 464 286 20 1 429 1 445 2.16e-26 112
MS.gene69840.t1 AT1G10400 26.696 457 271 19 7 429 6 432 2.54e-26 111
MS.gene69840.t1 AT2G18570 24.036 441 300 11 17 434 14 442 6.12e-26 110
MS.gene69840.t1 AT2G16890 27.083 432 270 19 8 412 9 422 1.30e-25 108
MS.gene69840.t1 AT2G30150 22.360 483 314 15 3 458 8 456 1.32e-25 109
MS.gene69840.t1 AT2G30140 24.070 457 284 15 1 429 1 422 2.64e-25 108
MS.gene69840.t1 AT2G30140 24.615 455 283 15 1 429 1 421 4.54e-25 107
MS.gene69840.t1 AT2G31750 24.839 467 279 19 1 433 1 429 1.46e-24 106
MS.gene69840.t1 AT3G50740 26.190 462 286 17 8 434 7 448 1.62e-24 106
MS.gene69840.t1 AT2G31750 24.839 467 279 19 1 433 1 429 2.47e-24 105
MS.gene69840.t1 AT3G53160 26.226 469 292 21 7 436 7 460 2.69e-24 105
MS.gene69840.t1 AT2G30150 22.410 473 306 15 13 458 2 440 5.88e-24 104
MS.gene69840.t1 AT5G59580 26.022 465 302 18 8 455 9 448 7.14e-24 103
MS.gene69840.t1 AT1G01420 25.216 464 295 17 1 434 4 445 9.64e-24 103
MS.gene69840.t1 AT1G01420 25.216 464 295 17 1 434 1 442 1.17e-23 103
MS.gene69840.t1 AT5G59590 26.907 472 289 21 8 458 10 446 6.10e-23 101
MS.gene69840.t1 AT4G15490 24.847 491 288 22 1 449 1 452 9.75e-23 100
MS.gene69840.t1 AT2G29730 32.489 237 143 7 200 425 202 432 6.89e-22 98.6
MS.gene69840.t1 AT2G43820 24.224 483 289 18 8 455 7 447 7.64e-22 98.2
MS.gene69840.t1 AT5G38040 25.265 471 281 21 16 454 18 449 1.18e-21 97.4
MS.gene69840.t1 AT4G14090 25.106 470 286 18 8 448 13 445 2.48e-21 96.7
MS.gene69840.t1 AT5G26310 24.180 488 309 16 8 459 7 469 3.79e-21 96.3
MS.gene69840.t1 AT2G36970 22.391 460 307 13 8 437 10 449 5.13e-21 95.9
MS.gene69840.t1 AT4G15480 24.945 457 294 17 7 434 18 454 1.03e-20 95.1
MS.gene69840.t1 AT4G01070 23.868 486 275 18 1 434 1 443 1.38e-20 94.7
MS.gene69840.t1 AT2G43840 31.841 201 123 5 259 455 257 447 6.64e-20 92.4
MS.gene69840.t1 AT2G43840 31.841 201 123 5 259 455 257 447 7.34e-20 92.0
MS.gene69840.t1 AT2G36790 27.079 469 274 19 7 427 12 460 1.20e-19 91.7
MS.gene69840.t1 AT1G06000 23.317 416 249 11 8 399 10 379 1.32e-19 91.3
MS.gene69840.t1 AT1G01390 25.212 472 286 19 1 434 1 443 1.35e-19 91.7
MS.gene69840.t1 AT5G05880 23.958 480 287 20 1 437 1 445 1.39e-19 91.3
MS.gene69840.t1 AT1G01390 24.948 477 281 20 1 434 18 460 1.76e-19 91.3
MS.gene69840.t1 AT1G07250 27.815 302 188 10 166 456 192 474 2.82e-19 90.5
MS.gene69840.t1 AT3G21560 25.054 463 275 19 8 429 12 443 4.48e-19 90.1
MS.gene69840.t1 AT2G28080 23.028 469 320 18 12 454 22 475 1.34e-18 88.6
MS.gene69840.t1 AT4G15500 23.956 455 308 16 1 434 1 438 3.19e-18 87.4
MS.gene69840.t1 AT1G24100 22.013 477 307 17 3 448 6 448 6.59e-18 86.3
MS.gene69840.t1 AT5G05890 26.766 269 174 10 189 437 184 449 8.76e-18 85.9
MS.gene69840.t1 AT1G78270 24.573 468 291 18 8 436 13 457 1.05e-17 85.9
MS.gene69840.t1 AT1G07260 29.167 240 157 7 225 454 235 471 1.47e-17 85.5
MS.gene69840.t1 AT5G38010 24.473 474 282 20 8 449 10 439 1.84e-17 84.7
MS.gene69840.t1 AT4G15280 28.674 279 168 7 207 456 231 507 1.91e-17 85.1
MS.gene69840.t1 AT4G15280 28.674 279 168 7 207 456 199 475 2.28e-17 84.7
MS.gene69840.t1 AT4G15550 25.607 453 289 19 12 436 19 451 4.34e-17 84.0
MS.gene69840.t1 AT3G16520 29.648 199 121 5 258 439 262 458 6.39e-17 83.2
MS.gene69840.t1 AT2G29710 31.754 211 123 7 228 425 230 432 7.67e-17 83.2
MS.gene69840.t1 AT3G16520 30.909 165 108 3 258 418 262 424 8.95e-17 82.8
MS.gene69840.t1 AT1G05560 24.109 477 302 19 8 456 5 449 9.60e-17 82.8
MS.gene69840.t1 AT3G16520 30.909 165 108 3 258 418 262 424 9.93e-17 82.8
MS.gene69840.t1 AT3G11340 27.586 232 151 7 203 427 192 413 1.00e-16 82.8
MS.gene69840.t1 AT3G02100 24.025 487 291 20 8 458 13 456 1.20e-16 82.4
MS.gene69840.t1 AT5G66690 28.099 242 151 6 236 459 233 469 1.29e-16 82.4
MS.gene69840.t1 AT1G05560 24.109 477 302 19 8 456 55 499 1.62e-16 82.4
MS.gene69840.t1 AT4G15260 27.523 218 137 5 259 458 144 358 3.38e-16 80.1
MS.gene69840.t1 AT5G05860 24.336 452 288 20 5 435 6 424 7.74e-16 80.1
MS.gene69840.t1 AT2G29740 29.500 200 131 5 236 427 250 447 9.77e-16 79.7
MS.gene69840.t1 AT1G05530 23.614 487 287 19 8 452 5 448 1.31e-15 79.3
MS.gene69840.t1 AT3G21790 26.977 215 138 4 259 456 268 480 1.62e-15 79.0
MS.gene69840.t1 AT3G46700 29.719 249 149 10 221 459 210 442 2.87e-15 78.2
MS.gene69840.t1 AT1G22360 31.111 180 110 6 259 436 287 454 9.88e-15 76.6
MS.gene69840.t1 AT2G23250 28.108 185 123 5 252 435 237 412 1.25e-14 76.3
MS.gene69840.t1 AT3G21760 27.895 190 119 4 259 432 271 458 2.38e-14 75.5
MS.gene69840.t1 AT3G22250 31.285 179 103 9 259 432 276 439 2.87e-14 75.1
MS.gene69840.t1 AT5G05900 22.366 465 307 18 1 436 1 440 3.71e-14 74.7
MS.gene69840.t1 AT1G22380 31.522 184 104 7 259 436 290 457 1.18e-13 73.2
MS.gene69840.t1 AT5G17050 22.296 453 310 16 2 436 6 434 1.30e-13 73.2
MS.gene69840.t1 AT3G21780 27.103 214 138 5 259 456 259 470 1.46e-13 73.2
MS.gene69840.t1 AT2G23260 27.027 185 125 5 253 436 256 431 1.81e-13 72.8
MS.gene69840.t1 AT1G22400 29.744 195 120 7 259 448 291 473 2.37e-13 72.4
MS.gene69840.t1 AT5G17030 22.538 457 301 20 3 436 7 433 5.66e-13 71.2
MS.gene69840.t1 AT1G30530 28.780 205 128 7 258 459 263 452 4.66e-12 68.2
MS.gene69840.t1 AT1G22360 32.609 138 86 4 259 394 287 419 6.75e-12 67.8
MS.gene69840.t1 AT3G55710 27.513 189 128 5 259 445 263 444 1.49e-11 66.6
MS.gene69840.t1 AT1G22340 25.843 178 123 4 259 436 290 458 1.83e-11 66.6
MS.gene69840.t1 AT3G46720 27.111 225 138 8 230 449 223 426 3.57e-11 65.5
MS.gene69840.t1 AT1G22370 23.326 433 258 16 8 394 13 417 6.09e-11 64.7

Find 98 sgRNAs with CRISPR-Local

Find 126 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATACAACAACAATTGATTT+TGG 0.147257 2.2:+13902618 MS.gene69840:CDS
AAATGGGGTTCTTGGCTTAA+TGG 0.175579 2.2:+13902382 MS.gene69840:CDS
TCAGATGTTTCTTTCTCTTT+AGG 0.182567 2.2:+13901857 MS.gene69840:CDS
TATCATTAATGCAAAGATTA+TGG 0.193627 2.2:+13902750 MS.gene69840:CDS
GGTAAGCCGGTTCTTCTTTC+GGG 0.198064 2.2:+13902319 MS.gene69840:CDS
TAAAGATTAAAGGATGAAAT+AGG 0.210953 2.2:-13902130 None:intergenic
TTCATGAGAATAAAGATTAA+AGG 0.229126 2.2:-13902140 None:intergenic
ACCCTTTCTTCAAACTGTTC+TGG 0.253609 2.2:-13902565 None:intergenic
TGGTAAGCCGGTTCTTCTTT+CGG 0.261558 2.2:+13902318 MS.gene69840:CDS
GATTACTTAGAACAAGAATT+TGG 0.263030 2.2:+13902298 MS.gene69840:CDS
CACATTGATGGTCTTCCCTT+TGG 0.278246 2.2:+13901821 MS.gene69840:CDS
AAGTGATTAAATTTGGATAA+AGG 0.291034 2.2:-13901778 None:intergenic
CCTCTTATTAAGCCATGATT+TGG 0.291623 2.2:+13902924 MS.gene69840:CDS
GAATCAAATCTTTGCAATAC+TGG 0.295673 2.2:+13902005 MS.gene69840:CDS
GATGAAATAGGGTAACCTTT+TGG 0.316874 2.2:-13902118 None:intergenic
CAGTTTCATGAATTGTTGTT+AGG 0.337899 2.2:+13902466 MS.gene69840:CDS
CTCAATGTTCCTCACATTGA+TGG 0.339215 2.2:+13901809 MS.gene69840:CDS
TGAAGCTGTGAAAATTGTTA+TGG 0.348457 2.2:+13902846 MS.gene69840:CDS
AGAAAATTGGAATTTGGAAG+TGG 0.352232 2.2:+13902184 MS.gene69840:CDS
GTACTTTCACACATCCTTGA+TGG 0.354575 2.2:-13902064 None:intergenic
TTGTTAGGACTTGAGTTAAC+AGG 0.363065 2.2:+13902481 MS.gene69840:CDS
GCAATTCTTAAACCTCCTAT+TGG 0.363474 2.2:+13902517 MS.gene69840:CDS
TTCTTGGCTTAATGGATTTG+AGG 0.366877 2.2:+13902390 MS.gene69840:CDS
TTGGAGTCATCTTGTGTTGA+TGG 0.373844 2.2:+13902943 MS.gene69840:CDS
TCCAGAACAGTTTGAAGAAA+GGG 0.391934 2.2:+13902564 MS.gene69840:CDS
ATCATTAATGCAAAGATTAT+GGG 0.399087 2.2:+13902751 MS.gene69840:CDS
CTCAAACAAATTAGCCAAAA+GGG 0.407355 2.2:+13901697 MS.gene69840:CDS
ATGAGATTGGCAGAGAAGTT+AGG 0.409004 2.2:+13902878 MS.gene69840:CDS
TTAAGCTTAAGTGATGCAAT+TGG 0.409271 2.2:+13902238 MS.gene69840:CDS
AGAGTATATGAAATTGTTGC+TGG 0.413566 2.2:-13902037 None:intergenic
GATTATGGGTAGGGAGTTGA+AGG 0.417425 2.2:+13902765 MS.gene69840:CDS
TTAGGTGGTTCAGGTAAAAC+AGG 0.424268 2.2:-13902343 None:intergenic
CCAAATCATGGCTTAATAAG+AGG 0.427128 2.2:-13902924 None:intergenic
GTGTTGATTCCACATTTAGA+TGG 0.433694 2.2:+13902721 MS.gene69840:CDS
GGGGCCGGTTCGTTGACAGA+GGG 0.443850 2.2:+13902676 MS.gene69840:CDS
TGTTCTAAGTAATCAACATA+AGG 0.454869 2.2:-13902289 None:intergenic
AAAGATTAAAGGATGAAATA+GGG 0.459912 2.2:-13902129 None:intergenic
ATGTTTCCATGGTTTGCAAT+GGG 0.460769 2.2:+13901650 MS.gene69840:CDS
GTTGTTTCGTAACACATTGT+GGG 0.463627 2.2:+13902656 MS.gene69840:CDS
GTGAAGAAGGGTGAAGAAGA+TGG 0.465141 2.2:+13902799 MS.gene69840:CDS
TCTCAAACAAATTAGCCAAA+AGG 0.469915 2.2:+13901696 MS.gene69840:CDS
CAGCCCCTCTGTCAACGAAC+CGG 0.472843 2.2:-13902680 None:intergenic
TTCCAGAACAGTTTGAAGAA+AGG 0.477271 2.2:+13902563 MS.gene69840:CDS
GAAAATTGGAATTTGGAAGT+GGG 0.477374 2.2:+13902185 MS.gene69840:CDS
ATGGGTAGGGAGTTGAAGGT+TGG 0.480555 2.2:+13902769 MS.gene69840:CDS
TAAGCTTAAGTGATGCAATT+GGG 0.482649 2.2:+13902239 MS.gene69840:CDS
AGAAGCTTCAAGAATTAGTC+AGG 0.484404 2.2:+13902974 MS.gene69840:CDS
TTGTTTGAGAGGTGAAGGTA+TGG 0.487213 2.2:-13901683 None:intergenic
CTAATTTGTTTGAGAGGTGA+AGG 0.487606 2.2:-13901688 None:intergenic
TTGATCGTCTCAAAACCAAT+AGG 0.488569 2.2:-13902532 None:intergenic
TGGCTTAATGGATTTGAGGA+TGG 0.490498 2.2:+13902394 MS.gene69840:CDS
AGAACAAGAATTTGGTAAGC+CGG 0.492555 2.2:+13902306 MS.gene69840:CDS
GTGATGCAATTGGGTTCAAA+GGG 0.494596 2.2:+13902248 MS.gene69840:CDS
ACAGGTCCCGAAAGAAGAAC+CGG 0.495275 2.2:-13902325 None:intergenic
TGCACATAGCAATGTTTCCA+TGG 0.496417 2.2:+13901639 MS.gene69840:CDS
AGTGATGCAATTGGGTTCAA+AGG 0.500112 2.2:+13902247 MS.gene69840:CDS
ATGGATGATGAAAATGAGAT+TGG 0.507108 2.2:+13902865 MS.gene69840:CDS
TCATTAGTTTATTGTGCACT+TGG 0.508637 2.2:+13902418 MS.gene69840:CDS
TTCGTAACACATTGTGGGGC+CGG 0.513530 2.2:+13902661 MS.gene69840:CDS
GGTTGGAGTTGAAGTGAAGA+AGG 0.514720 2.2:+13902786 MS.gene69840:CDS
AAAATTGGAATTTGGAAGTG+GGG 0.521972 2.2:+13902186 MS.gene69840:CDS
AAGAAAGGGTCAAGGGCAAA+GGG 0.524723 2.2:+13902578 MS.gene69840:CDS
GAAGAAAGGGTCAAGGGCAA+AGG 0.525993 2.2:+13902577 MS.gene69840:CDS
AATGTTTCCATGGTTTGCAA+TGG 0.527358 2.2:+13901649 MS.gene69840:CDS
GGAATAATCATGATAAATTG+AGG 0.527721 2.2:+13902899 MS.gene69840:CDS
GGTTGTTTCGTAACACATTG+TGG 0.533258 2.2:+13902655 MS.gene69840:CDS
TGGGGCCGGTTCGTTGACAG+AGG 0.536756 2.2:+13902675 MS.gene69840:CDS
ATTGTGCACTTGGAAGTGAA+TGG 0.539631 2.2:+13902428 MS.gene69840:CDS
CATATACTCTATCTCCATCA+AGG 0.539771 2.2:+13902050 MS.gene69840:CDS
CACAAGATGACTCCAAATCA+TGG 0.540851 2.2:-13902936 None:intergenic
TGAAGTGGTTTCAGCACCAA+AGG 0.543525 2.2:-13901837 None:intergenic
TAATGCAAAGATTATGGGTA+GGG 0.544981 2.2:+13902756 MS.gene69840:CDS
ATCGTCTCAAAACCAATAGG+AGG 0.545151 2.2:-13902529 None:intergenic
AAGGGATTGTTCATAGTGGA+TGG 0.547267 2.2:+13902596 MS.gene69840:CDS
TCCACTCATCATGACAGCTA+TGG 0.562897 2.2:+13901880 MS.gene69840:CDS
AGAGAAAGAAACATCTGAAG+TGG 0.564919 2.2:-13901852 None:intergenic
GGCAAAGGGATTGTTCATAG+TGG 0.566958 2.2:+13902592 MS.gene69840:CDS
TTGTTTCGTAACACATTGTG+GGG 0.571938 2.2:+13902657 MS.gene69840:CDS
GTTGGAGTTGAAGTGAAGAA+GGG 0.572282 2.2:+13902787 MS.gene69840:CDS
AAAGGGTGTAGAGAAATTGA+AGG 0.575653 2.2:+13902265 MS.gene69840:CDS
ACAGTTTGAAGAAAGGGTCA+AGG 0.582278 2.2:+13902570 MS.gene69840:CDS
CAAAGAAGATGCTGGATCCA+TGG 0.583868 2.2:-13901618 None:intergenic
CAGTTTGAAGAAAGGGTCAA+GGG 0.589195 2.2:+13902571 MS.gene69840:CDS
GAAGTGGTTTCAGCACCAAA+GGG 0.596496 2.2:-13901836 None:intergenic
TCAATGTGAGGAACATTGAG+AGG 0.602741 2.2:-13901806 None:intergenic
TTAATGCAAAGATTATGGGT+AGG 0.611774 2.2:+13902755 MS.gene69840:CDS
GCTGACAAATAATTGTCAGA+TGG 0.619313 2.2:+13902699 MS.gene69840:CDS
GGGCCGGTTCGTTGACAGAG+GGG 0.624383 2.2:+13902677 MS.gene69840:CDS
GCTATGTGCAAAGAAGATGC+TGG 0.627151 2.2:-13901626 None:intergenic
ATATGATCACCATCTAAATG+TGG 0.627652 2.2:-13902730 None:intergenic
AAGTGTCCCATTGCAAACCA+TGG 0.628477 2.2:-13901656 None:intergenic
TCAAACAAATTAGCCAAAAG+GGG 0.645079 2.2:+13901698 MS.gene69840:CDS
AAGGGTGTAGAGAAATTGAA+GGG 0.647340 2.2:+13902266 MS.gene69840:CDS
TCCATAGCTGTCATGATGAG+TGG 0.650873 2.2:-13901881 None:intergenic
CAATGTGAGGAACATTGAGA+GGG 0.652742 2.2:-13901805 None:intergenic
GTGAGAAGAAGTTCAACTTG+AGG 0.659642 2.2:-13901914 None:intergenic
AGAAGATGGATTCTTCACAA+AGG 0.694956 2.2:+13902813 MS.gene69840:CDS
AAGGGAAGACCATCAATGTG+AGG 0.696002 2.2:-13901818 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAAAAGAAAATTGGAATT+TGG + chr2.2:13902178-13902197 MS.gene69840:CDS 15.0%
!!! AAATCAAAGAAAACAATTTT+AGG - chr2.2:13901950-13901969 None:intergenic 15.0%
!! AAAGATTAAAGGATGAAATA+GGG - chr2.2:13902132-13902151 None:intergenic 20.0%
!! AAGTGATTAAATTTGGATAA+AGG - chr2.2:13901781-13901800 None:intergenic 20.0%
!! ATCATTAATGCAAAGATTAT+GGG + chr2.2:13902751-13902770 MS.gene69840:CDS 20.0%
!! TAAAGATTAAAGGATGAAAT+AGG - chr2.2:13902133-13902152 None:intergenic 20.0%
!! TATCATTAATGCAAAGATTA+TGG + chr2.2:13902750-13902769 MS.gene69840:CDS 20.0%
!! TTCATGAGAATAAAGATTAA+AGG - chr2.2:13902143-13902162 None:intergenic 20.0%
!!! AAACTGTTTTAGATGAAAAA+TGG + chr2.2:13902365-13902384 MS.gene69840:CDS 20.0%
!!! AACTGTTTTAGATGAAAAAT+GGG + chr2.2:13902366-13902385 MS.gene69840:CDS 20.0%
!!! TCTTGCTTTAAAAAGAAAAT+TGG + chr2.2:13902171-13902190 MS.gene69840:CDS 20.0%
!!! TTTTATGATAGGCTTTTTAA+TGG + chr2.2:13902214-13902233 MS.gene69840:CDS 20.0%
!!! TTTTCATCTAAAACAGTTTT+AGG - chr2.2:13902364-13902383 None:intergenic 20.0%
! GATTACTTAGAACAAGAATT+TGG + chr2.2:13902298-13902317 MS.gene69840:CDS 25.0%
! GGAATAATCATGATAAATTG+AGG + chr2.2:13902899-13902918 MS.gene69840:CDS 25.0%
! GGGTAAAAAGTGATTAAATT+TGG - chr2.2:13901788-13901807 None:intergenic 25.0%
!! TGTTCTAAGTAATCAACATA+AGG - chr2.2:13902292-13902311 None:intergenic 25.0%
!!! AACTTTGTTTGTGTTTTCTT+GGG - chr2.2:13901746-13901765 None:intergenic 25.0%
!!! ACTGTTTTAGATGAAAAATG+GGG + chr2.2:13902367-13902386 MS.gene69840:CDS 25.0%
!!! GATACAACAACAATTGATTT+TGG + chr2.2:13902618-13902637 MS.gene69840:CDS 25.0%
!!! TAACTTTGTTTGTGTTTTCT+TGG - chr2.2:13901747-13901766 None:intergenic 25.0%
!!! TTTTCTTTGATTTTGCCTTT+TGG + chr2.2:13901957-13901976 MS.gene69840:CDS 25.0%
AAAATTGGAATTTGGAAGTG+GGG + chr2.2:13902186-13902205 MS.gene69840:CDS 30.0%
AGAAAATTGGAATTTGGAAG+TGG + chr2.2:13902184-13902203 MS.gene69840:CDS 30.0%
AGAGTATATGAAATTGTTGC+TGG - chr2.2:13902040-13902059 None:intergenic 30.0%
ATATGATCACCATCTAAATG+TGG - chr2.2:13902733-13902752 None:intergenic 30.0%
ATGGATGATGAAAATGAGAT+TGG + chr2.2:13902865-13902884 MS.gene69840:CDS 30.0%
CCAAAAATTGCTCAAAGTTT+AGG + chr2.2:13901983-13902002 MS.gene69840:CDS 30.0%
CTCAAACAAATTAGCCAAAA+GGG + chr2.2:13901697-13901716 MS.gene69840:CDS 30.0%
GAAAATTGGAATTTGGAAGT+GGG + chr2.2:13902185-13902204 MS.gene69840:CDS 30.0%
GAATCAAATCTTTGCAATAC+TGG + chr2.2:13902005-13902024 MS.gene69840:CDS 30.0%
GGTTTAAGAATTGCCAAAAA+TGG - chr2.2:13902511-13902530 None:intergenic 30.0%
TAAGCTTAAGTGATGCAATT+GGG + chr2.2:13902239-13902258 MS.gene69840:CDS 30.0%
TAATGCAAAGATTATGGGTA+GGG + chr2.2:13902756-13902775 MS.gene69840:CDS 30.0%
TCAAACAAATTAGCCAAAAG+GGG + chr2.2:13901698-13901717 MS.gene69840:CDS 30.0%
TCAGATGTTTCTTTCTCTTT+AGG + chr2.2:13901857-13901876 MS.gene69840:CDS 30.0%
TCTCAAACAAATTAGCCAAA+AGG + chr2.2:13901696-13901715 MS.gene69840:CDS 30.0%
TGAAGCTGTGAAAATTGTTA+TGG + chr2.2:13902846-13902865 MS.gene69840:CDS 30.0%
TTAAGCTTAAGTGATGCAAT+TGG + chr2.2:13902238-13902257 MS.gene69840:CDS 30.0%
TTAATGCAAAGATTATGGGT+AGG + chr2.2:13902755-13902774 MS.gene69840:CDS 30.0%
! ATGAAATAGGGTAACCTTTT+GGG - chr2.2:13902120-13902139 None:intergenic 30.0%
! CAGTTTCATGAATTGTTGTT+AGG + chr2.2:13902466-13902485 MS.gene69840:CDS 30.0%
! CCTAAACTTTGAGCAATTTT+TGG - chr2.2:13901986-13902005 None:intergenic 30.0%
! GTTAACAGGTTATCCATTTT+TGG + chr2.2:13902495-13902514 MS.gene69840:CDS 30.0%
! TCATTAGTTTATTGTGCACT+TGG + chr2.2:13902418-13902437 MS.gene69840:CDS 30.0%
!! ACTTTGTTTGTGTTTTCTTG+GGG - chr2.2:13901745-13901764 None:intergenic 30.0%
!!! AGCAATTTTTGGTATCCAAA+AGG - chr2.2:13901975-13901994 None:intergenic 30.0%
!!! ATTTTGGAACATTCATCTGT+TGG + chr2.2:13902634-13902653 MS.gene69840:CDS 30.0%
!!! TCATCTAAAACAGTTTTAGG+TGG - chr2.2:13902361-13902380 None:intergenic 30.0%
!!! TTTTGGCTAATTTGTTTGAG+AGG - chr2.2:13901697-13901716 None:intergenic 30.0%
AGAACAAGAATTTGGTAAGC+CGG + chr2.2:13902306-13902325 MS.gene69840:CDS 35.0%
AGAAGCTTCAAGAATTAGTC+AGG + chr2.2:13902974-13902993 MS.gene69840:CDS 35.0%
AGAGAAAGAAACATCTGAAG+TGG - chr2.2:13901855-13901874 None:intergenic 35.0%
CATATACTCTATCTCCATCA+AGG + chr2.2:13902050-13902069 MS.gene69840:CDS 35.0%
CCAAATCATGGCTTAATAAG+AGG - chr2.2:13902927-13902946 None:intergenic 35.0%
CCTCTTATTAAGCCATGATT+TGG + chr2.2:13902924-13902943 MS.gene69840:CDS 35.0%
GATCTTATTAAACCCCCAAA+AGG + chr2.2:13902103-13902122 MS.gene69840:CDS 35.0%
GCAATTCTTAAACCTCCTAT+TGG + chr2.2:13902517-13902536 MS.gene69840:CDS 35.0%
GCTGACAAATAATTGTCAGA+TGG + chr2.2:13902699-13902718 MS.gene69840:CDS 35.0%
TAGATGAAAAATGGGGTTCT+TGG + chr2.2:13902374-13902393 MS.gene69840:CDS 35.0%
TCCAGAACAGTTTGAAGAAA+GGG + chr2.2:13902564-13902583 MS.gene69840:CDS 35.0%
TTCCAGAACAGTTTGAAGAA+AGG + chr2.2:13902563-13902582 MS.gene69840:CDS 35.0%
TTGATCGTCTCAAAACCAAT+AGG - chr2.2:13902535-13902554 None:intergenic 35.0%
TTGTTAGGACTTGAGTTAAC+AGG + chr2.2:13902481-13902500 MS.gene69840:CDS 35.0%
TTGTTTCGTAACACATTGTG+GGG + chr2.2:13902657-13902676 MS.gene69840:CDS 35.0%
! AAAGGGTGTAGAGAAATTGA+AGG + chr2.2:13902265-13902284 MS.gene69840:CDS 35.0%
! AAGGGTGTAGAGAAATTGAA+GGG + chr2.2:13902266-13902285 MS.gene69840:CDS 35.0%
! AATGTTTCCATGGTTTGCAA+TGG + chr2.2:13901649-13901668 MS.gene69840:CDS 35.0%
! AGAAGATGGATTCTTCACAA+AGG + chr2.2:13902813-13902832 MS.gene69840:CDS 35.0%
! ATGTTTCCATGGTTTGCAAT+GGG + chr2.2:13901650-13901669 MS.gene69840:CDS 35.0%
! GATGAAATAGGGTAACCTTT+TGG - chr2.2:13902121-13902140 None:intergenic 35.0%
! GTTGTTTCGTAACACATTGT+GGG + chr2.2:13902656-13902675 MS.gene69840:CDS 35.0%
! TGAAATAGGGTAACCTTTTG+GGG - chr2.2:13902119-13902138 None:intergenic 35.0%
!! CTAATTTGTTTGAGAGGTGA+AGG - chr2.2:13901691-13901710 None:intergenic 35.0%
!! GTGTTGATTCCACATTTAGA+TGG + chr2.2:13902721-13902740 MS.gene69840:CDS 35.0%
!! TTCTTGGCTTAATGGATTTG+AGG + chr2.2:13902390-13902409 MS.gene69840:CDS 35.0%
!!! AAAACAGTTTTAGGTGGTTC+AGG - chr2.2:13902355-13902374 None:intergenic 35.0%
!!! GTGGGGTTCTTTTTTATGAT+AGG + chr2.2:13902203-13902222 MS.gene69840:CDS 35.0%
AAATGGGGTTCTTGGCTTAA+TGG + chr2.2:13902382-13902401 MS.gene69840:CDS 40.0%
ACAGTTTGAAGAAAGGGTCA+AGG + chr2.2:13902570-13902589 MS.gene69840:CDS 40.0%
ACCCTTTCTTCAAACTGTTC+TGG - chr2.2:13902568-13902587 None:intergenic 40.0%
AGTGATGCAATTGGGTTCAA+AGG + chr2.2:13902247-13902266 MS.gene69840:CDS 40.0%
ATCGTCTCAAAACCAATAGG+AGG - chr2.2:13902532-13902551 None:intergenic 40.0%
ATGAGATTGGCAGAGAAGTT+AGG + chr2.2:13902878-13902897 MS.gene69840:CDS 40.0%
ATTGTGCACTTGGAAGTGAA+TGG + chr2.2:13902428-13902447 MS.gene69840:CDS 40.0%
CAATGTGAGGAACATTGAGA+GGG - chr2.2:13901808-13901827 None:intergenic 40.0%
CACAAGATGACTCCAAATCA+TGG - chr2.2:13902939-13902958 None:intergenic 40.0%
CAGTTTGAAGAAAGGGTCAA+GGG + chr2.2:13902571-13902590 MS.gene69840:CDS 40.0%
CTCAATGTTCCTCACATTGA+TGG + chr2.2:13901809-13901828 MS.gene69840:CDS 40.0%
GTACTTTCACACATCCTTGA+TGG - chr2.2:13902067-13902086 None:intergenic 40.0%
GTGAGAAGAAGTTCAACTTG+AGG - chr2.2:13901917-13901936 None:intergenic 40.0%
GTGATGCAATTGGGTTCAAA+GGG + chr2.2:13902248-13902267 MS.gene69840:CDS 40.0%
GTTGGAGTTGAAGTGAAGAA+GGG + chr2.2:13902787-13902806 MS.gene69840:CDS 40.0%
TCAATGTGAGGAACATTGAG+AGG - chr2.2:13901809-13901828 None:intergenic 40.0%
TGCACATAGCAATGTTTCCA+TGG + chr2.2:13901639-13901658 MS.gene69840:CDS 40.0%
TTAGGTGGTTCAGGTAAAAC+AGG - chr2.2:13902346-13902365 None:intergenic 40.0%
TTGGAGTCATCTTGTGTTGA+TGG + chr2.2:13902943-13902962 MS.gene69840:CDS 40.0%
TTGTTTGAGAGGTGAAGGTA+TGG - chr2.2:13901686-13901705 None:intergenic 40.0%
! AAGGGATTGTTCATAGTGGA+TGG + chr2.2:13902596-13902615 MS.gene69840:CDS 40.0%
! AGAGATTTTGTGTCCCCTTT+TGG - chr2.2:13901714-13901733 None:intergenic 40.0%
! GAAATAGGGTAACCTTTTGG+GGG - chr2.2:13902118-13902137 None:intergenic 40.0%
! GGTTGTTTCGTAACACATTG+TGG + chr2.2:13902655-13902674 MS.gene69840:CDS 40.0%
!! TGGCTTAATGGATTTGAGGA+TGG + chr2.2:13902394-13902413 MS.gene69840:CDS 40.0%
AAGAAAGGGTCAAGGGCAAA+GGG + chr2.2:13902578-13902597 MS.gene69840:CDS 45.0%
AAGGGAAGACCATCAATGTG+AGG - chr2.2:13901821-13901840 None:intergenic 45.0%
AAGTGTCCCATTGCAAACCA+TGG - chr2.2:13901659-13901678 None:intergenic 45.0%
GAAGTGGTTTCAGCACCAAA+GGG - chr2.2:13901839-13901858 None:intergenic 45.0%
GATTATGGGTAGGGAGTTGA+AGG + chr2.2:13902765-13902784 MS.gene69840:CDS 45.0%
GCTATGTGCAAAGAAGATGC+TGG - chr2.2:13901629-13901648 None:intergenic 45.0%
GGCAAAGGGATTGTTCATAG+TGG + chr2.2:13902592-13902611 MS.gene69840:CDS 45.0%
GGTTGGAGTTGAAGTGAAGA+AGG + chr2.2:13902786-13902805 MS.gene69840:CDS 45.0%
GTGAAGAAGGGTGAAGAAGA+TGG + chr2.2:13902799-13902818 MS.gene69840:CDS 45.0%
TCCACTCATCATGACAGCTA+TGG + chr2.2:13901880-13901899 MS.gene69840:CDS 45.0%
TCCATAGCTGTCATGATGAG+TGG - chr2.2:13901884-13901903 None:intergenic 45.0%
TGAAGTGGTTTCAGCACCAA+AGG - chr2.2:13901840-13901859 None:intergenic 45.0%
! CACATTGATGGTCTTCCCTT+TGG + chr2.2:13901821-13901840 MS.gene69840:CDS 45.0%
! TGGTAAGCCGGTTCTTCTTT+CGG + chr2.2:13902318-13902337 MS.gene69840:CDS 45.0%
ACAGGTCCCGAAAGAAGAAC+CGG - chr2.2:13902328-13902347 None:intergenic 50.0%
ATGGGTAGGGAGTTGAAGGT+TGG + chr2.2:13902769-13902788 MS.gene69840:CDS 50.0%
GAAGAAAGGGTCAAGGGCAA+AGG + chr2.2:13902577-13902596 MS.gene69840:CDS 50.0%
TTCGTAACACATTGTGGGGC+CGG + chr2.2:13902661-13902680 MS.gene69840:CDS 50.0%
! GGTAAGCCGGTTCTTCTTTC+GGG + chr2.2:13902319-13902338 MS.gene69840:CDS 50.0%
CAGCCCCTCTGTCAACGAAC+CGG - chr2.2:13902683-13902702 None:intergenic 60.0%
!! GGGCCGGTTCGTTGACAGAG+GGG + chr2.2:13902677-13902696 MS.gene69840:CDS 65.0%
!! GGGGCCGGTTCGTTGACAGA+GGG + chr2.2:13902676-13902695 MS.gene69840:CDS 65.0%
!! TGGGGCCGGTTCGTTGACAG+AGG + chr2.2:13902675-13902694 MS.gene69840:CDS 65.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 13901620 13902999 13901620 ID=MS.gene69840
chr2.2 mRNA 13901620 13902999 13901620 ID=MS.gene69840.t1;Parent=MS.gene69840
chr2.2 exon 13901620 13902999 13901620 ID=MS.gene69840.t1.exon1;Parent=MS.gene69840.t1
chr2.2 CDS 13901620 13902999 13901620 ID=cds.MS.gene69840.t1;Parent=MS.gene69840.t1
Gene Sequence

>MS.gene69840

ATGGATCCAGCATCTTCTTTGCACATAGCAATGTTTCCATGGTTTGCAATGGGACACTTAACTCCATACCTTCACCTCTCAAACAAATTAGCCAAAAGGGGACACAAAATCTCTTTCTTCATCCCCAAGAAAACACAAACAAAGTTAGAACAATTCAACCTTTATCCAAATTTAATCACTTTTTACCCTCTCAATGTTCCTCACATTGATGGTCTTCCCTTTGGTGCTGAAACCACTTCAGATGTTTCTTTCTCTTTAGGTCCACTCATCATGACAGCTATGGATCAAACTCAGCCTCAAGTTGAACTTCTTCTCACTCAACTAAATCCTAAAATTGTTTTCTTTGATTTTGCCTTTTGGATACCAAAAATTGCTCAAAGTTTAGGAATCAAATCTTTGCAATACTGGATTGTTAGTCCAGCAACAATTTCATATACTCTATCTCCATCAAGGATGTGTGAAAGTACAAACTTGACTGAATTTGATCTTATTAAACCCCCAAAAGGTTACCCTATTTCATCCTTTAATCTTTATTCTCATGAAGCAAAGTATCTTGCTTTAAAAAGAAAATTGGAATTTGGAAGTGGGGTTCTTTTTTATGATAGGCTTTTTAATGGTTTAAGCTTAAGTGATGCAATTGGGTTCAAAGGGTGTAGAGAAATTGAAGGGCCTTATGTTGATTACTTAGAACAAGAATTTGGTAAGCCGGTTCTTCTTTCGGGACCTGTTTTACCTGAACCACCTAAAACTGTTTTAGATGAAAAATGGGGTTCTTGGCTTAATGGATTTGAGGATGGTTCATTAGTTTATTGTGCACTTGGAAGTGAATGGAAATTAACACAAGAACAGTTTCATGAATTGTTGTTAGGACTTGAGTTAACAGGTTATCCATTTTTGGCAATTCTTAAACCTCCTATTGGTTTTGAGACGATCAAAGATGCTTTTCCAGAACAGTTTGAAGAAAGGGTCAAGGGCAAAGGGATTGTTCATAGTGGATGGATACAACAACAATTGATTTTGGAACATTCATCTGTTGGTTGTTTCGTAACACATTGTGGGGCCGGTTCGTTGACAGAGGGGCTGACAAATAATTGTCAGATGGTGTTGATTCCACATTTAGATGGTGATCATATCATTAATGCAAAGATTATGGGTAGGGAGTTGAAGGTTGGAGTTGAAGTGAAGAAGGGTGAAGAAGATGGATTCTTCACAAAGGAAAGTGTTTGTGAAGCTGTGAAAATTGTTATGGATGATGAAAATGAGATTGGCAGAGAAGTTAGGAATAATCATGATAAATTGAGGAACCTCTTATTAAGCCATGATTTGGAGTCATCTTGTGTTGATGGTTTCTGTGAGAAGCTTCAAGAATTAGTCAGGTGA
Protein sequence

>MS.gene69840.t1

MDPASSLHIAMFPWFAMGHLTPYLHLSNKLAKRGHKISFFIPKKTQTKLEQFNLYPNLITFYPLNVPHIDGLPFGAETTSDVSFSLGPLIMTAMDQTQPQVELLLTQLNPKIVFFDFAFWIPKIAQSLGIKSLQYWIVSPATISYTLSPSRMCESTNLTEFDLIKPPKGYPISSFNLYSHEAKYLALKRKLEFGSGVLFYDRLFNGLSLSDAIGFKGCREIEGPYVDYLEQEFGKPVLLSGPVLPEPPKTVLDEKWGSWLNGFEDGSLVYCALGSEWKLTQEQFHELLLGLELTGYPFLAILKPPIGFETIKDAFPEQFEERVKGKGIVHSGWIQQQLILEHSSVGCFVTHCGAGSLTEGLTNNCQMVLIPHLDGDHIINAKIMGRELKVGVEVKKGEEDGFFTKESVCEAVKIVMDDENEIGREVRNNHDKLRNLLLSHDLESSCVDGFCEKLQELVR