AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene065242


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene065242.t1 MTR_2g083480 82.135 459 81 1 1 459 1 458 0.0 768
MS.gene065242.t1 MTR_2g083420 81.264 459 61 2 1 459 1 434 0.0 765
MS.gene065242.t1 MTR_2g083390 81.264 459 61 2 1 459 1 434 0.0 762
MS.gene065242.t1 MTR_2g083430 76.471 459 107 1 1 459 1 458 0.0 697
MS.gene065242.t1 MTR_2g083380 66.667 459 152 1 1 459 18 475 0.0 614
MS.gene065242.t1 MTR_2g083490 65.359 459 158 1 1 459 1 458 0.0 610
MS.gene065242.t1 MTR_4g079250 60.304 461 178 4 1 459 1 458 0.0 572
MS.gene065242.t1 MTR_4g079270 59.653 461 181 4 1 459 1 458 0.0 565
MS.gene065242.t1 MTR_2g014900 57.837 453 189 2 7 459 6 456 0.0 536
MS.gene065242.t1 MTR_2g083360 62.996 454 62 5 6 459 27 374 0.0 530
MS.gene065242.t1 MTR_1g090270 41.432 461 251 11 7 458 14 464 1.81e-111 337
MS.gene065242.t1 MTR_2g086283 57.708 253 55 2 206 458 135 335 2.32e-93 286
MS.gene065242.t1 MTR_2g086283 65.385 130 44 1 11 140 1 129 2.34e-50 174
MS.gene065242.t1 MTR_4g059370 41.158 311 169 5 154 458 89 391 3.49e-76 243
MS.gene065242.t1 MTR_8g068360 32.777 479 284 15 2 459 6 467 7.24e-70 229
MS.gene065242.t1 MTR_8g068330 31.857 474 298 14 1 459 1 464 3.08e-67 222
MS.gene065242.t1 MTR_4g123553 33.191 467 273 15 6 455 13 457 2.02e-65 218
MS.gene065242.t1 MTR_7g067330 31.624 468 261 15 2 455 3 425 1.26e-64 214
MS.gene065242.t1 MTR_8g068340 30.603 464 307 10 2 455 6 464 1.51e-64 215
MS.gene065242.t1 MTR_6g042310 32.258 465 278 14 7 455 17 460 1.01e-61 208
MS.gene065242.t1 MTR_7g067120 31.116 466 262 16 2 453 3 423 1.54e-60 204
MS.gene065242.t1 MTR_2g008226 32.692 468 288 14 6 455 8 466 1.59e-60 205
MS.gene065242.t1 MTR_6g036650 30.526 475 292 13 1 455 11 467 4.68e-60 204
MS.gene065242.t1 MTR_2g008225 30.786 471 294 13 2 456 9 463 5.68e-60 203
MS.gene065242.t1 MTR_2g008220 31.277 470 293 12 2 456 8 462 1.37e-59 202
MS.gene065242.t1 MTR_2g014930 41.034 290 90 6 17 306 9 217 8.80e-58 190
MS.gene065242.t1 MTR_2g046620 31.613 465 283 14 6 455 14 458 8.86e-58 197
MS.gene065242.t1 MTR_2g083440 78.431 102 22 0 358 459 11 112 2.42e-52 172
MS.gene065242.t1 MTR_4g077960 30.543 442 272 15 17 443 1 422 5.79e-51 179
MS.gene065242.t1 MTR_4g079280 40.611 229 90 3 11 239 1 183 9.14e-51 170
MS.gene065242.t1 MTR_3g435310 29.911 448 261 12 6 451 16 412 1.70e-48 172
MS.gene065242.t1 MTR_1g090280 42.788 208 107 5 262 458 108 314 2.75e-45 160
MS.gene065242.t1 MTR_8g007650 29.841 439 281 10 7 428 6 434 6.93e-45 163
MS.gene065242.t1 MTR_8g007565 29.613 439 282 10 7 428 6 434 7.07e-45 163
MS.gene065242.t1 MTR_5g066410 27.876 452 276 10 11 439 1 425 6.80e-42 154
MS.gene065242.t1 MTR_8g066610 27.600 500 300 19 1 458 1 480 1.72e-34 135
MS.gene065242.t1 MTR_6g023665 27.740 447 282 15 9 429 14 445 1.83e-30 123
MS.gene065242.t1 MTR_8g071070 25.941 478 320 13 5 458 4 471 1.90e-30 123
MS.gene065242.t1 MTR_4g031800 26.337 486 306 17 6 459 7 472 1.93e-30 123
MS.gene065242.t1 MTR_5g087620 26.151 478 299 17 8 444 10 474 6.17e-30 122
MS.gene065242.t1 MTR_4g485590 29.024 410 232 15 8 395 9 381 2.20e-29 119
MS.gene065242.t1 MTR_2g098430 24.468 470 297 17 9 441 7 455 2.33e-29 120
MS.gene065242.t1 MTR_0009s0240 26.829 410 273 13 5 398 4 402 3.05e-29 119
MS.gene065242.t1 MTR_1g062380 26.882 465 293 18 5 433 13 466 9.12e-29 119
MS.gene065242.t1 MTR_8g009050 27.447 470 268 16 7 435 5 442 1.17e-28 118
MS.gene065242.t1 MTR_6g488280 26.966 445 288 13 9 429 7 438 4.02e-28 116
MS.gene065242.t1 MTR_0428s0010 26.966 445 288 13 9 429 7 438 4.02e-28 116
MS.gene065242.t1 MTR_8g009055 26.856 458 286 17 7 435 5 442 7.30e-28 115
MS.gene065242.t1 MTR_8g465670 25.835 449 279 14 9 425 8 434 2.10e-27 114
MS.gene065242.t1 MTR_8g027885 27.887 459 277 17 6 437 16 447 1.23e-26 112
MS.gene065242.t1 MTR_6g038220 24.947 473 296 16 8 455 11 449 1.63e-26 111
MS.gene065242.t1 MTR_8g027870 26.681 476 261 18 6 437 16 447 2.04e-26 111
MS.gene065242.t1 MTR_8g006710 25.893 448 290 16 9 429 7 439 2.42e-26 111
MS.gene065242.t1 MTR_4g485620 25.747 435 291 12 47 458 32 457 3.94e-26 110
MS.gene065242.t1 MTR_8g006220 25.821 457 277 15 9 425 7 441 4.69e-26 110
MS.gene065242.t1 MTR_6g005600 35.897 195 105 4 256 437 255 442 5.18e-26 110
MS.gene065242.t1 MTR_8g008990 26.247 461 287 17 7 435 5 444 8.93e-26 109
MS.gene065242.t1 MTR_5g045970 26.539 471 286 15 5 433 13 465 1.67e-25 109
MS.gene065242.t1 MTR_7g117170 37.569 181 97 5 260 428 268 444 2.43e-25 108
MS.gene065242.t1 MTR_4g485630 25.000 464 292 17 7 437 8 448 2.46e-25 108
MS.gene065242.t1 MTR_8g006730 25.893 448 293 16 8 429 6 440 2.56e-25 108
MS.gene065242.t1 MTR_7g070740 24.520 469 293 14 7 434 10 458 2.66e-25 108
MS.gene065242.t1 MTR_6g038230 25.833 480 292 19 8 459 11 454 3.35e-25 108
MS.gene065242.t1 MTR_7g070660 23.673 452 291 15 7 422 10 443 3.59e-25 108
MS.gene065242.t1 MTR_3g009510 32.719 217 127 5 237 437 241 454 3.98e-25 108
MS.gene065242.t1 MTR_5g035560 24.583 480 297 18 7 457 10 453 6.98e-25 107
MS.gene065242.t1 MTR_7g070810 24.661 442 297 13 7 422 8 439 2.64e-24 105
MS.gene065242.t1 MTR_0078s0060 33.505 194 115 5 254 437 253 442 3.53e-24 105
MS.gene065242.t1 MTR_6g033625 26.078 464 278 18 9 435 5 440 3.87e-24 105
MS.gene065242.t1 MTR_6g038200 24.733 469 303 18 8 455 11 450 3.93e-24 104
MS.gene065242.t1 MTR_0184s0030 34.272 213 115 7 234 426 230 437 3.96e-24 105
MS.gene065242.t1 MTR_7g013180 25.814 430 281 13 8 420 5 413 5.85e-24 104
MS.gene065242.t1 MTR_8g009063 26.226 469 276 17 7 437 12 448 6.93e-24 104
MS.gene065242.t1 MTR_6g033615 25.664 452 281 16 9 435 5 426 7.34e-24 103
MS.gene065242.t1 MTR_8g012635 33.636 220 120 8 236 432 235 451 1.06e-23 103
MS.gene065242.t1 MTR_0184s0040 32.474 194 117 5 254 437 269 458 1.35e-23 103
MS.gene065242.t1 MTR_0078s0190 32.474 194 117 5 254 437 269 458 1.35e-23 103
MS.gene065242.t1 MTR_8g009073 27.254 477 258 23 7 435 5 440 1.42e-23 103
MS.gene065242.t1 MTR_7g070940 23.251 443 311 13 7 428 8 442 2.17e-23 102
MS.gene065242.t1 MTR_4g117980 24.401 459 289 16 6 425 9 448 2.20e-23 102
MS.gene065242.t1 MTR_0078s0010 34.896 192 111 5 254 435 254 441 2.44e-23 102
MS.gene065242.t1 MTR_7g070780 23.656 465 306 13 5 434 8 458 2.99e-23 102
MS.gene065242.t1 MTR_8g006270 29.167 240 151 6 207 428 198 436 3.02e-23 102
MS.gene065242.t1 MTR_4g024020 24.784 464 292 18 7 428 8 456 3.03e-23 102
MS.gene065242.t1 MTR_4g128720 25.110 454 291 16 7 441 14 437 3.18e-23 102
MS.gene065242.t1 MTR_8g466240 34.158 202 114 7 213 399 202 399 3.23e-23 102
MS.gene065242.t1 MTR_7g102460 25.957 470 276 21 7 428 8 453 3.23e-23 102
MS.gene065242.t1 MTR_6g038240 33.511 188 111 7 249 436 258 431 3.53e-23 102
MS.gene065242.t1 MTR_4g117950 25.835 449 277 15 6 423 4 427 5.66e-23 101
MS.gene065242.t1 MTR_8g077590 28.315 279 179 6 166 429 168 440 6.15e-23 101
MS.gene065242.t1 MTR_3g069690 32.787 183 114 5 254 435 251 425 6.62e-23 101
MS.gene065242.t1 MTR_7g013220 24.784 464 291 16 8 445 5 436 8.05e-23 100
MS.gene065242.t1 MTR_8g012730 31.797 217 129 5 229 429 69 282 1.28e-22 98.2
MS.gene065242.t1 MTR_7g013200 32.212 208 125 8 242 445 230 425 1.32e-22 100
MS.gene065242.t1 MTR_7g102490 25.486 463 289 17 7 428 8 455 2.13e-22 100
MS.gene065242.t1 MTR_1g019520 33.862 189 110 4 258 435 4 188 2.27e-22 95.5
MS.gene065242.t1 MTR_8g009073 33.023 215 126 7 235 435 101 311 2.33e-22 98.2
MS.gene065242.t1 MTR_5g035580 31.884 207 131 5 253 459 257 453 2.73e-22 99.4
MS.gene065242.t1 MTR_2g034990 24.070 457 299 15 1 423 4 446 2.87e-22 99.8
MS.gene065242.t1 MTR_7g070610 23.467 473 294 16 7 434 12 461 2.98e-22 99.8
MS.gene065242.t1 MTR_8g012650 31.651 218 128 5 236 436 235 448 3.11e-22 99.4
MS.gene065242.t1 MTR_5g098930 23.732 493 307 16 7 457 4 469 3.43e-22 99.4
MS.gene065242.t1 MTR_2g046820 32.609 230 141 6 237 455 236 462 3.91e-22 99.0
MS.gene065242.t1 MTR_6g033725 30.802 237 142 7 217 435 205 437 4.02e-22 99.0
MS.gene065242.t1 MTR_7g102560 24.947 469 294 16 1 428 1 452 5.41e-22 99.0
MS.gene065242.t1 MTR_1g107350 25.581 473 285 21 1 435 1 444 7.90e-22 98.2
MS.gene065242.t1 MTR_7g046490 34.375 192 112 4 254 433 250 439 8.47e-22 98.2
MS.gene065242.t1 MTR_7g047030 34.409 186 108 5 260 435 260 441 1.00e-21 97.8
MS.gene065242.t1 MTR_7g047270 34.409 186 108 5 260 435 260 441 1.00e-21 97.8
MS.gene065242.t1 MTR_8g009067 34.043 188 110 5 258 435 139 322 1.10e-21 96.3
MS.gene065242.t1 MTR_2g059240 24.370 476 309 13 2 439 8 470 1.66e-21 97.1
MS.gene065242.t1 MTR_8g009067 34.043 188 110 5 258 435 257 440 1.77e-21 97.1
MS.gene065242.t1 MTR_7g055710 23.326 463 306 13 7 434 10 458 1.78e-21 97.4
MS.gene065242.t1 MTR_3g009490 35.329 167 92 4 284 437 3 166 2.42e-21 91.7
MS.gene065242.t1 MTR_7g117405 26.496 468 279 21 8 434 12 455 3.56e-21 96.3
MS.gene065242.t1 MTR_7g102550 24.641 487 310 18 8 453 9 479 3.65e-21 96.3
MS.gene065242.t1 MTR_3g069710 29.572 257 166 8 211 458 204 454 3.76e-21 96.3
MS.gene065242.t1 MTR_7g070800 23.701 481 283 16 5 434 3 450 4.14e-21 96.3
MS.gene065242.t1 MTR_7g070910 23.011 465 310 14 5 434 8 459 1.04e-20 95.1
MS.gene065242.t1 MTR_2g046750 32.174 230 142 6 237 455 239 465 1.11e-20 94.7
MS.gene065242.t1 MTR_8g012630 32.258 186 108 4 260 429 206 389 1.26e-20 94.0
MS.gene065242.t1 MTR_1g019510 33.862 189 110 5 258 435 255 439 1.44e-20 94.4
MS.gene065242.t1 MTR_8g083280 30.631 222 137 7 242 457 249 459 1.49e-20 94.4
MS.gene065242.t1 MTR_8g083290 23.480 477 279 17 6 435 2 439 2.10e-20 94.0
MS.gene065242.t1 MTR_5g045960 25.887 479 296 21 7 444 8 468 2.30e-20 94.0
MS.gene065242.t1 MTR_8g064880 25.926 459 257 20 5 413 6 431 2.43e-20 94.0
MS.gene065242.t1 MTR_2g040530 29.167 264 157 7 220 455 203 464 2.47e-20 93.6
MS.gene065242.t1 MTR_8g012745 27.491 291 180 10 162 429 160 442 3.55e-20 93.2
MS.gene065242.t1 MTR_5g019580 30.544 239 146 6 237 457 265 501 4.05e-20 93.2
MS.gene065242.t1 MTR_0536s0010 24.722 449 281 16 6 423 19 441 4.17e-20 93.2
MS.gene065242.t1 MTR_5g019580 30.544 239 146 6 237 457 241 477 4.54e-20 93.2
MS.gene065242.t1 MTR_8g006260 30.516 213 127 8 242 436 246 455 4.56e-20 92.8
MS.gene065242.t1 MTR_7g071040 22.678 463 314 13 5 434 14 465 6.03e-20 92.8
MS.gene065242.t1 MTR_1g107315 25.561 446 277 17 1 413 1 424 6.67e-20 92.4
MS.gene065242.t1 MTR_3g049970 25.263 475 280 19 3 435 4 445 8.42e-20 92.0
MS.gene065242.t1 MTR_8g074550 22.222 495 294 17 1 435 1 464 9.73e-20 92.0
MS.gene065242.t1 MTR_8g044140 25.320 391 245 12 64 422 37 412 9.86e-20 91.7
MS.gene065242.t1 MTR_8g088560 29.876 241 135 9 237 455 229 457 1.01e-19 91.7
MS.gene065242.t1 MTR_7g013240 24.070 457 283 18 8 441 6 421 1.31e-19 91.3
MS.gene065242.t1 MTR_3g084530 30.137 219 124 7 242 437 238 450 1.67e-19 91.3
MS.gene065242.t1 MTR_3g084540 29.224 219 127 6 242 437 238 451 1.69e-19 91.3
MS.gene065242.t1 MTR_2g035020 23.404 470 310 17 1 437 4 456 1.88e-19 91.3
MS.gene065242.t1 MTR_4g082810 26.555 418 266 14 7 398 6 408 1.97e-19 90.5
MS.gene065242.t1 MTR_6g013900 32.768 177 105 6 254 428 283 447 2.07e-19 90.9
MS.gene065242.t1 MTR_4g128690 23.276 464 284 17 1 435 8 428 3.02e-19 90.1
MS.gene065242.t1 MTR_7g102450 35.227 176 102 4 265 429 267 441 3.04e-19 90.5
MS.gene065242.t1 MTR_5g090610 27.076 277 173 7 187 439 173 444 3.78e-19 90.1
MS.gene065242.t1 MTR_6g035185 22.484 467 304 15 1 428 4 451 3.93e-19 90.1
MS.gene065242.t1 MTR_6g033675 28.992 238 142 8 220 435 208 440 4.00e-19 90.1
MS.gene065242.t1 MTR_5g067170 31.522 184 111 4 254 423 262 444 4.12e-19 90.1
MS.gene065242.t1 MTR_5g027210 26.199 271 163 6 213 451 212 477 5.10e-19 89.7
MS.gene065242.t1 MTR_1g107360 29.825 228 144 6 233 455 245 461 6.03e-19 89.4
MS.gene065242.t1 MTR_4g094920 28.846 208 139 6 254 455 275 479 6.11e-19 89.7
MS.gene065242.t1 MTR_4g485640 24.545 440 284 16 18 428 219 639 7.34e-19 89.7
MS.gene065242.t1 MTR_6g033660 32.065 184 119 4 254 435 260 439 8.02e-19 89.4
MS.gene065242.t1 MTR_5g098960 31.897 232 134 9 234 455 229 446 8.45e-19 89.0
MS.gene065242.t1 MTR_5g090660 29.075 227 136 7 235 439 233 456 8.58e-19 89.4
MS.gene065242.t1 MTR_3g084520 30.890 191 119 6 254 437 266 450 9.67e-19 89.0
MS.gene065242.t1 MTR_7g013260 24.829 439 265 17 8 419 6 406 1.18e-18 88.6
MS.gene065242.t1 MTR_6g038300 30.688 189 118 6 249 437 258 433 1.51e-18 88.2
MS.gene065242.t1 MTR_3g079480 23.542 463 286 18 8 428 21 457 1.58e-18 88.2
MS.gene065242.t1 MTR_5g090700 30.357 224 133 7 237 439 239 460 1.66e-18 88.2
MS.gene065242.t1 MTR_7g102520 36.025 161 101 2 255 414 276 435 1.88e-18 88.2
MS.gene065242.t1 MTR_0891s0010 30.409 171 110 4 258 428 97 258 2.16e-18 85.9
MS.gene065242.t1 MTR_4g095008 28.365 208 140 6 254 455 260 464 2.19e-18 88.2
MS.gene065242.t1 MTR_6g014170 29.592 196 124 6 254 447 266 449 2.22e-18 87.8
MS.gene065242.t1 MTR_6g035265 30.108 186 113 5 258 428 259 442 2.35e-18 87.8
MS.gene065242.t1 MTR_8g008970 31.915 188 114 5 258 435 257 440 3.20e-18 88.2
MS.gene065242.t1 MTR_8g008970 32.597 181 108 5 258 437 596 763 8.18e-18 86.7
MS.gene065242.t1 MTR_1g029540 23.276 464 304 19 13 451 19 455 3.56e-18 87.0
MS.gene065242.t1 MTR_8g090095 27.203 261 168 8 210 451 218 475 3.75e-18 87.0
MS.gene065242.t1 MTR_7g080935 22.467 454 304 12 7 441 10 434 4.16e-18 87.0
MS.gene065242.t1 MTR_5g090620 26.641 259 151 8 218 439 203 459 4.41e-18 87.0
MS.gene065242.t1 MTR_0288s0020 29.204 226 141 8 211 430 230 442 5.08e-18 86.7
MS.gene065242.t1 MTR_7g080950 31.746 189 116 7 254 442 253 428 5.22e-18 86.7
MS.gene065242.t1 MTR_7g011470 27.018 285 173 11 171 435 172 441 6.34e-18 86.3
MS.gene065242.t1 MTR_2g035040 29.381 194 118 5 258 437 173 361 6.38e-18 85.9
MS.gene065242.t1 MTR_1g032490 25.546 458 260 19 2 413 4 426 1.11e-17 85.5
MS.gene065242.t1 MTR_3g479520 22.376 505 324 20 1 459 1 483 1.16e-17 85.5
MS.gene065242.t1 MTR_7g011470 26.715 277 169 10 178 435 176 437 1.21e-17 85.5
MS.gene065242.t1 MTR_6g013920 28.718 195 122 6 254 437 283 471 1.46e-17 85.5
MS.gene065242.t1 MTR_8g032950 23.851 457 297 17 6 428 10 449 1.72e-17 85.1
MS.gene065242.t1 MTR_4g117960 31.492 181 108 4 258 423 266 445 1.74e-17 85.1
MS.gene065242.t1 MTR_5g072810 22.272 449 297 16 8 435 12 429 1.79e-17 84.7
MS.gene065242.t1 MTR_7g080940 21.413 453 314 11 5 441 8 434 1.84e-17 84.7
MS.gene065242.t1 MTR_6g014220 30.000 180 112 6 258 435 286 453 1.87e-17 85.1
MS.gene065242.t1 MTR_5g029800 30.978 184 112 4 254 423 260 442 2.00e-17 85.1
MS.gene065242.t1 MTR_6g014250 29.016 193 121 7 258 447 286 465 2.31e-17 84.7
MS.gene065242.t1 MTR_3g479610 27.586 232 145 8 211 428 59 281 2.45e-17 83.2
MS.gene065242.t1 MTR_7g070870 23.039 408 285 12 4 395 15 409 2.58e-17 84.3
MS.gene065242.t1 MTR_6g014020 30.337 178 110 6 254 427 284 451 3.08e-17 84.3
MS.gene065242.t1 MTR_4g108250 23.291 468 302 16 7 433 10 461 3.38e-17 84.3
MS.gene065242.t1 MTR_4g008630 26.909 275 171 9 200 451 191 458 4.28e-17 84.0
MS.gene065242.t1 MTR_8g064870 24.330 485 270 22 5 435 8 449 4.50e-17 84.0
MS.gene065242.t1 MTR_2g008210 31.818 176 111 6 254 428 278 445 4.70e-17 83.6
MS.gene065242.t1 MTR_5g072820 22.624 442 301 14 8 435 10 424 4.97e-17 83.6
MS.gene065242.t1 MTR_1g107375 29.437 231 133 9 220 435 214 429 5.36e-17 83.6
MS.gene065242.t1 MTR_7g012120 30.435 184 113 4 254 423 266 448 6.47e-17 83.6
MS.gene065242.t1 MTR_7g070860 22.363 474 280 15 7 434 6 437 8.81e-17 82.8
MS.gene065242.t1 MTR_5g090630 27.426 237 149 6 242 457 233 467 8.84e-17 82.8
MS.gene065242.t1 MTR_6g014200 29.891 184 115 6 254 435 281 452 9.01e-17 82.8
MS.gene065242.t1 MTR_5g058320 25.793 473 272 23 4 430 7 446 1.02e-16 82.8
MS.gene065242.t1 MTR_7g470610 33.125 160 102 4 254 410 128 285 1.44e-16 80.5
MS.gene065242.t1 MTR_7g070583 33.125 160 102 4 254 410 128 285 1.44e-16 80.5
MS.gene065242.t1 MTR_5g016480 26.316 209 148 5 252 457 267 472 1.46e-16 82.4
MS.gene065242.t1 MTR_3g479490 29.586 169 110 4 260 428 283 442 1.65e-16 82.0
MS.gene065242.t1 MTR_6g013990 28.261 184 118 6 254 435 282 453 1.68e-16 82.0
MS.gene065242.t1 MTR_7g071050 28.638 213 133 7 254 456 227 430 1.75e-16 81.6
MS.gene065242.t1 MTR_6g011340 25.368 272 171 11 182 435 198 455 1.77e-16 82.0
MS.gene065242.t1 MTR_1g107365 29.851 201 115 7 228 413 258 447 2.04e-16 82.0
MS.gene065242.t1 MTR_5g072840 21.847 444 302 13 8 435 10 424 2.17e-16 81.6
MS.gene065242.t1 MTR_6g014190 29.891 184 115 6 254 435 91 262 2.33e-16 79.7
MS.gene065242.t1 MTR_8g059425 28.492 179 117 6 258 430 286 459 2.36e-16 81.6
MS.gene065242.t1 MTR_6g014050 30.055 183 112 7 256 435 287 456 2.36e-16 81.6
MS.gene065242.t1 MTR_4g082820 32.461 191 109 4 237 407 234 424 3.51e-16 80.9
MS.gene065242.t1 MTR_5g040030 25.681 257 158 8 216 448 224 471 4.46e-16 80.9
MS.gene065242.t1 MTR_8g007585 29.444 180 113 6 258 435 200 367 5.77e-16 79.7
MS.gene065242.t1 MTR_4g117890 28.415 183 115 4 258 425 260 441 7.77e-16 80.1
MS.gene065242.t1 MTR_5g072860 22.319 457 305 14 8 441 18 447 8.52e-16 79.7
MS.gene065242.t1 MTR_3g031450 25.561 223 136 5 221 428 213 420 1.07e-15 79.7
MS.gene065242.t1 MTR_6g013450 27.869 183 121 5 254 430 285 462 1.17e-15 79.3
MS.gene065242.t1 MTR_6g014270 28.804 184 117 6 254 435 283 454 1.28e-15 79.3
MS.gene065242.t1 MTR_6g014240 28.261 184 118 6 254 435 251 422 1.65e-15 79.0
MS.gene065242.t1 MTR_8g056740 25.431 232 159 5 211 432 111 338 1.73e-15 78.6
MS.gene065242.t1 MTR_3g008010 28.333 180 115 6 258 435 286 453 2.03e-15 78.6
MS.gene065242.t1 MTR_6g014040 29.189 185 116 6 254 428 285 464 2.41e-15 78.6
MS.gene065242.t1 MTR_6g014310 26.446 242 146 10 211 435 230 456 2.41e-15 78.6
MS.gene065242.t1 MTR_6g014150 28.649 185 117 6 254 428 281 460 2.53e-15 78.6
MS.gene065242.t1 MTR_0536s0020 28.415 183 115 4 258 425 265 446 2.67e-15 78.6
MS.gene065242.t1 MTR_5g090580 24.549 277 172 8 216 457 202 476 2.67e-15 78.2
MS.gene065242.t1 MTR_5g072830 22.072 444 301 15 8 435 10 424 2.80e-15 78.2
MS.gene065242.t1 MTR_7g070930 32.258 186 111 6 260 434 281 462 3.73e-15 77.8
MS.gene065242.t1 MTR_5g070040 30.769 221 135 10 222 429 228 443 5.68e-15 77.4
MS.gene065242.t1 MTR_5g016660 21.535 469 296 17 2 422 3 447 1.29e-14 76.3
MS.gene065242.t1 MTR_1g107285 32.500 160 97 4 254 411 267 417 1.63e-14 75.9
MS.gene065242.t1 MTR_6g014290 27.933 179 113 7 260 435 288 453 2.46e-14 75.5
MS.gene065242.t1 MTR_5g004940 35.294 119 75 2 258 375 197 314 3.45e-14 74.3
MS.gene065242.t1 MTR_7g039550 26.190 252 151 9 221 448 5 245 4.09e-14 72.8
MS.gene065242.t1 MTR_4g118000 23.451 452 272 19 6 418 10 426 5.08e-14 74.3
MS.gene065242.t1 MTR_1g040310 21.491 456 286 17 7 417 14 442 6.10e-14 74.3
MS.gene065242.t1 MTR_5g464810 29.609 179 109 7 254 429 282 446 2.41e-13 72.4
MS.gene065242.t1 MTR_5g064240 29.609 179 109 7 254 429 282 446 2.41e-13 72.4
MS.gene065242.t1 MTR_6g013960 28.276 145 97 4 254 396 284 423 2.84e-13 72.0
MS.gene065242.t1 MTR_7g080900 30.058 173 111 5 258 430 264 426 7.76e-13 70.5
MS.gene065242.t1 MTR_8g009840 28.862 246 142 8 208 433 266 498 8.06e-13 70.9
MS.gene065242.t1 MTR_6g014300 26.582 158 102 6 280 435 296 441 2.76e-12 68.9
MS.gene065242.t1 MTR_4g064987 24.145 468 271 22 18 447 18 439 6.84e-12 67.8
MS.gene065242.t1 MTR_0477s0010 30.345 145 94 4 254 396 121 260 6.93e-12 66.6
MS.gene065242.t1 MTR_4g064987 24.242 462 272 22 18 447 18 433 8.78e-12 67.4
MS.gene065242.t1 MTR_5g031840 31.915 141 88 5 258 396 272 406 1.67e-11 66.6
MS.gene065242.t1 MTR_6g078320 26.667 195 133 2 237 421 252 446 1.71e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene065242.t1 AT5G54010 44.518 456 241 6 5 459 3 447 1.70e-138 405
MS.gene065242.t1 AT4G27570 43.421 456 241 6 7 459 6 447 3.20e-137 402
MS.gene065242.t1 AT5G53990 44.835 455 231 7 7 459 5 441 7.06e-137 401
MS.gene065242.t1 AT4G27560 43.202 456 242 6 7 459 6 447 5.01e-135 397
MS.gene065242.t1 AT5G54060 43.384 461 251 8 5 459 10 466 1.67e-134 396
MS.gene065242.t1 AT1G64920 43.137 459 237 8 7 459 5 445 1.45e-133 393
MS.gene065242.t1 AT4G09500 43.392 454 239 6 7 459 5 441 2.50e-133 392
MS.gene065242.t1 AT2G22930 44.493 454 234 6 7 459 5 441 1.49e-131 387
MS.gene065242.t1 AT1G64910 42.702 459 235 8 7 459 5 441 1.35e-129 382
MS.gene065242.t1 AT3G29630 42.070 454 244 5 5 455 3 440 2.52e-128 379
MS.gene065242.t1 AT3G29630 41.463 451 225 6 5 455 3 414 1.19e-120 359
MS.gene065242.t1 AT4G09500 41.280 453 225 7 7 459 5 416 2.19e-119 355
MS.gene065242.t1 AT1G50580 41.410 454 245 7 5 455 3 438 7.61e-118 352
MS.gene065242.t1 AT2G22590 33.547 468 277 16 7 455 14 466 6.22e-70 229
MS.gene065242.t1 AT5G49690 32.574 439 276 10 7 438 9 434 8.03e-66 219
MS.gene065242.t1 AT5G65550 30.655 473 296 16 1 455 1 459 7.75e-61 206
MS.gene065242.t1 AT2G22930 38.532 218 119 3 7 224 5 207 3.96e-45 159
MS.gene065242.t1 AT2G22930 38.095 105 60 3 358 459 187 289 1.56e-13 71.2
MS.gene065242.t1 AT5G03490 26.503 449 285 13 6 436 17 438 2.39e-34 134
MS.gene065242.t1 AT5G12890 26.652 469 294 17 4 438 6 458 1.46e-33 132
MS.gene065242.t1 AT1G73880 26.115 471 285 16 2 429 8 458 4.53e-32 128
MS.gene065242.t1 AT2G16890 27.837 467 290 23 8 446 9 456 3.90e-31 125
MS.gene065242.t1 AT1G51210 26.697 442 280 12 8 434 20 432 7.86e-31 124
MS.gene065242.t1 AT4G34138 27.016 496 296 17 5 459 8 478 1.42e-30 124
MS.gene065242.t1 AT2G15480 26.350 463 294 14 7 435 9 458 4.84e-30 122
MS.gene065242.t1 AT4G34131 26.253 499 300 19 2 455 4 479 9.94e-30 121
MS.gene065242.t1 AT2G15490 26.049 453 294 14 7 428 6 448 1.22e-29 121
MS.gene065242.t1 AT2G15490 26.096 456 293 15 7 428 6 451 1.33e-29 121
MS.gene065242.t1 AT2G15480 26.364 440 287 11 7 417 9 440 1.54e-29 120
MS.gene065242.t1 AT4G36770 36.530 219 120 6 231 436 228 440 2.08e-29 120
MS.gene065242.t1 AT2G36770 27.897 466 279 20 6 429 12 462 3.31e-29 120
MS.gene065242.t1 AT1G05675 27.333 450 278 18 8 435 6 428 7.58e-29 118
MS.gene065242.t1 AT4G34135 26.439 469 260 16 7 429 10 439 1.11e-28 118
MS.gene065242.t1 AT2G36750 28.540 459 278 19 6 428 8 452 1.32e-28 118
MS.gene065242.t1 AT2G36800 26.915 457 293 17 5 428 9 457 1.78e-28 118
MS.gene065242.t1 AT2G16890 27.610 431 270 21 8 413 9 422 2.67e-28 116
MS.gene065242.t1 AT5G14860 26.653 484 317 17 1 455 1 475 8.24e-28 115
MS.gene065242.t1 AT2G31750 25.000 460 294 15 1 437 1 432 1.13e-27 115
MS.gene065242.t1 AT1G10400 25.941 478 302 19 7 452 6 463 1.13e-27 115
MS.gene065242.t1 AT2G36780 27.706 462 278 20 7 428 13 458 1.44e-27 115
MS.gene065242.t1 AT2G31750 25.000 460 294 15 1 437 1 432 1.59e-27 115
MS.gene065242.t1 AT3G50740 25.431 464 290 16 8 436 7 449 8.68e-27 113
MS.gene065242.t1 AT2G18570 30.159 252 151 5 203 435 197 442 9.89e-27 112
MS.gene065242.t1 AT1G05680 26.991 452 277 18 8 435 6 428 1.12e-26 112
MS.gene065242.t1 AT2G18560 29.762 252 152 6 203 435 107 352 3.61e-26 109
MS.gene065242.t1 AT3G53150 26.866 469 292 18 7 436 21 477 3.27e-25 108
MS.gene065242.t1 AT1G01420 35.047 214 118 6 237 435 238 445 2.66e-24 105
MS.gene065242.t1 AT2G36760 26.522 460 293 17 6 429 12 462 2.67e-24 105
MS.gene065242.t1 AT1G01420 35.047 214 118 6 237 435 235 442 2.70e-24 105
MS.gene065242.t1 AT2G31790 24.793 484 297 19 8 459 8 456 6.84e-24 104
MS.gene065242.t1 AT5G59580 26.496 468 295 19 8 455 9 447 3.90e-23 102
MS.gene065242.t1 AT2G30140 24.681 470 304 17 8 457 13 452 4.52e-23 101
MS.gene065242.t1 AT4G01070 34.272 213 122 6 237 435 235 443 1.40e-22 100
MS.gene065242.t1 AT2G36970 29.825 228 148 6 216 438 229 449 1.67e-22 100
MS.gene065242.t1 AT2G30140 24.034 466 313 16 8 457 13 453 2.81e-22 99.4
MS.gene065242.t1 AT5G59590 30.970 268 168 10 196 455 191 449 6.40e-22 98.2
MS.gene065242.t1 AT2G29730 26.316 456 280 17 7 429 4 436 7.92e-22 98.2
MS.gene065242.t1 AT5G66690 23.608 449 310 11 8 436 7 442 1.13e-21 97.8
MS.gene065242.t1 AT3G53160 24.947 469 294 21 1 428 1 452 1.24e-21 97.8
MS.gene065242.t1 AT2G43840 32.632 190 118 4 260 449 257 436 1.62e-21 97.1
MS.gene065242.t1 AT2G43820 32.124 193 121 4 258 450 255 437 1.68e-21 97.1
MS.gene065242.t1 AT2G43840 32.632 190 118 4 260 449 257 436 1.99e-21 97.1
MS.gene065242.t1 AT4G15480 24.401 459 303 17 3 435 14 454 2.31e-21 97.1
MS.gene065242.t1 AT2G30150 22.062 485 315 18 4 459 6 456 9.05e-21 95.1
MS.gene065242.t1 AT5G05860 24.887 442 295 16 7 436 8 424 2.30e-20 93.6
MS.gene065242.t1 AT5G26310 23.125 480 311 14 8 453 7 462 3.96e-20 93.2
MS.gene065242.t1 AT3G21560 24.746 493 306 17 4 459 8 472 6.22e-20 92.8
MS.gene065242.t1 AT3G46670 30.802 237 148 9 230 458 223 451 6.91e-20 92.4
MS.gene065242.t1 AT1G07250 29.004 231 152 6 237 457 246 474 7.24e-20 92.4
MS.gene065242.t1 AT3G46660 33.796 216 122 9 237 446 237 437 7.53e-20 92.0
MS.gene065242.t1 AT2G36790 27.623 467 282 21 2 428 7 457 1.19e-19 91.7
MS.gene065242.t1 AT5G05880 25.658 456 291 17 1 430 1 434 1.34e-19 91.3
MS.gene065242.t1 AT4G15550 30.882 204 128 6 242 437 253 451 1.46e-19 91.3
MS.gene065242.t1 AT3G11340 31.667 180 111 6 258 435 251 420 1.94e-19 90.9
MS.gene065242.t1 AT4G15500 29.952 207 131 7 258 458 267 465 4.33e-19 90.1
MS.gene065242.t1 AT2G30150 21.776 473 310 17 13 459 2 440 4.74e-19 89.7
MS.gene065242.t1 AT3G21790 28.794 257 159 6 221 455 224 478 5.20e-19 89.7
MS.gene065242.t1 AT5G05870 28.992 238 151 8 207 436 204 431 5.25e-19 89.7
MS.gene065242.t1 AT1G01390 33.010 206 116 7 242 429 240 441 5.55e-19 89.7
MS.gene065242.t1 AT1G01390 33.010 206 116 7 242 429 257 458 5.59e-19 89.7
MS.gene065242.t1 AT4G15280 29.644 253 152 7 224 457 230 475 2.56e-18 87.8
MS.gene065242.t1 AT4G15280 29.644 253 152 7 224 457 262 507 2.67e-18 87.8
MS.gene065242.t1 AT4G15490 22.777 461 311 16 1 435 1 442 2.76e-18 87.4
MS.gene065242.t1 AT1G05530 27.059 255 162 6 223 459 206 454 3.14e-18 87.4
MS.gene065242.t1 AT5G05890 26.693 251 166 8 202 437 198 445 3.34e-18 87.0
MS.gene065242.t1 AT3G21760 28.774 212 133 5 260 455 271 480 5.99e-18 86.7
MS.gene065242.t1 AT3G55700 29.703 202 133 5 247 446 246 440 1.07e-17 85.5
MS.gene065242.t1 AT3G22250 33.520 179 93 8 258 428 274 434 1.12e-17 85.5
MS.gene065242.t1 AT4G15260 28.372 215 135 5 260 457 144 356 1.16e-17 84.7
MS.gene065242.t1 AT1G05560 28.139 231 145 7 242 457 225 449 1.36e-17 85.5
MS.gene065242.t1 AT1G05560 28.139 231 145 7 242 457 275 499 1.45e-17 85.5
MS.gene065242.t1 AT3G16520 30.208 192 123 4 260 447 263 447 1.61e-17 85.1
MS.gene065242.t1 AT3G55710 34.286 140 87 4 260 397 263 399 2.01e-17 84.7
MS.gene065242.t1 AT3G21800 29.108 213 132 4 260 455 265 475 2.30e-17 84.7
MS.gene065242.t1 AT1G24100 28.947 190 126 4 260 449 268 448 2.83e-17 84.3
MS.gene065242.t1 AT3G16520 30.939 181 114 4 260 436 263 436 3.58e-17 84.0
MS.gene065242.t1 AT3G16520 30.939 181 114 4 260 436 263 436 4.00e-17 84.0
MS.gene065242.t1 AT2G29710 34.831 178 100 7 260 429 267 436 4.38e-17 84.0
MS.gene065242.t1 AT5G38040 24.947 469 286 21 16 455 18 449 5.77e-17 83.2
MS.gene065242.t1 AT3G46690 30.244 205 133 6 198 395 191 392 1.54e-16 82.0
MS.gene065242.t1 AT1G06000 24.752 404 249 16 8 395 10 374 1.63e-16 82.0
MS.gene065242.t1 AT3G21750 26.556 241 155 5 237 457 232 470 2.29e-16 81.6
MS.gene065242.t1 AT1G78270 29.213 178 117 5 260 437 289 457 2.42e-16 81.6
MS.gene065242.t1 AT3G21780 28.505 214 135 5 260 457 259 470 3.04e-16 81.3
MS.gene065242.t1 AT1G07260 27.511 229 154 6 237 455 245 471 3.57e-16 81.3
MS.gene065242.t1 AT2G28080 25.403 248 163 7 215 444 220 463 6.46e-16 80.5
MS.gene065242.t1 AT5G17030 27.083 240 151 9 203 434 207 430 7.60e-16 80.1
MS.gene065242.t1 AT1G22400 30.337 178 114 5 260 437 291 458 1.01e-15 79.7
MS.gene065242.t1 AT2G23250 29.310 232 146 7 236 455 210 435 1.28e-15 79.3
MS.gene065242.t1 AT2G29740 30.348 201 130 7 237 429 250 448 1.61e-15 79.0
MS.gene065242.t1 AT4G14090 27.391 230 151 8 228 449 224 445 1.85e-15 79.0
MS.gene065242.t1 AT1G22360 29.348 184 120 5 254 437 281 454 1.91e-15 79.0
MS.gene065242.t1 AT5G38010 29.317 249 151 10 207 448 207 437 4.99e-15 77.4
MS.gene065242.t1 AT2G23260 29.379 177 117 5 260 436 262 430 5.88e-15 77.4
MS.gene065242.t1 AT1G22380 29.730 185 118 6 254 437 284 457 9.81e-15 76.6
MS.gene065242.t1 AT3G46720 30.500 200 114 7 237 428 229 411 9.48e-14 73.6
MS.gene065242.t1 AT3G02100 29.348 184 107 6 260 441 279 441 2.48e-13 72.4
MS.gene065242.t1 AT1G22360 30.282 142 96 3 254 395 281 419 7.27e-13 70.9
MS.gene065242.t1 AT3G46650 29.545 220 139 8 228 441 205 414 1.83e-12 69.3
MS.gene065242.t1 AT1G22340 26.404 178 122 4 260 437 290 458 5.39e-12 68.2

Find 84 sgRNAs with CRISPR-Local

Find 98 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACTATCTTCAAACTGTTTA+TGG 0.065632 2.1:-17743591 MS.gene065242:CDS
GGAAAACCTGTTCTGCTTTC+AGG 0.116567 2.1:-17743570 MS.gene065242:CDS
TCAAAGTAAGCTGGTAATAT+TGG 0.222813 2.1:+17743855 None:intergenic
AAAGGAAAAGGGATTGTTTA+TGG 0.232535 2.1:-17743300 MS.gene065242:CDS
ATCACAGTTCCTCATGTTAA+TGG 0.297077 2.1:-17744083 MS.gene065242:CDS
AGGAACTGTGATAGGGAAAA+AGG 0.317464 2.1:+17744094 None:intergenic
GGGTTTAGTGAAAGGGTTAA+AGG 0.333009 2.1:-17743318 MS.gene065242:CDS
AAGGGATTGTTTATGGAAGT+TGG 0.335805 2.1:-17743293 MS.gene065242:CDS
ACCCTTTCACTAAACCCTTC+AGG 0.349714 2.1:+17743324 None:intergenic
TTGCTTGGTCTTGAATTAAC+AGG 0.351707 2.1:-17743408 MS.gene065242:CDS
GCCACCAAATACAACTTTAG+AGG 0.355460 2.1:-17743532 MS.gene065242:CDS
ATAAGAGGGAATAAAGAAAA+TGG 0.359021 2.1:+17744026 None:intergenic
TTAACATGAGGAACTGTGAT+AGG 0.365215 2.1:+17744086 None:intergenic
TCCTCTAAAGTTGTATTTGG+TGG 0.375237 2.1:+17743531 None:intergenic
TCAGTAAGCAAACTAGAGTT+TGG 0.376300 2.1:-17743711 MS.gene065242:CDS
GCAGCACTTAAGCCACCTAT+TGG 0.380205 2.1:-17743372 MS.gene065242:CDS
GGCTTAAGTGCTGCAAGAAA+TGG 0.387827 2.1:+17743381 None:intergenic
AGTGATGAGTTCAAAGTTCA+AGG 0.399604 2.1:-17743124 MS.gene065242:CDS
ACCTCTTAATGCTAACTTGT+TGG 0.399917 2.1:+17744193 None:intergenic
GTGAAAGGGTTAAAGGAAAA+GGG 0.402436 2.1:-17743311 MS.gene065242:CDS
AAAATGGGTTGCATGGCTTA+AGG 0.414943 2.1:-17743508 MS.gene065242:CDS
AGTGAAAGGGTTAAAGGAAA+AGG 0.420115 2.1:-17743312 MS.gene065242:CDS
AAATCAAAGAAAACTATTTG+TGG 0.424765 2.1:+17743945 None:intergenic
AAATGGGTTGCATGGCTTAA+GGG 0.427342 2.1:-17743507 MS.gene065242:CDS
TTATACGATCGCATTGGAAT+AGG 0.430219 2.1:-17743675 MS.gene065242:CDS
TCCAACAAGTTAGCATTAAG+AGG 0.432689 2.1:-17744194 MS.gene065242:CDS
CAGTTTCTAGAGCTGTTGCT+TGG 0.434467 2.1:-17743423 MS.gene065242:CDS
TCTGTGGTTTATTGTGCATA+TGG 0.439244 2.1:-17743471 MS.gene065242:CDS
ACCTGAAGGGTTTAGTGAAA+GGG 0.441816 2.1:-17743325 MS.gene065242:CDS
TCAATCAACTCAAATCCAAT+AGG 0.441856 2.1:+17743357 None:intergenic
AGAGGACCTGAAAGCAGAAC+AGG 0.445486 2.1:+17743564 None:intergenic
AGAAACTGATTATGCTGTAA+TGG 0.452696 2.1:+17743438 None:intergenic
AAAGGTTGTAGAGAAATTGA+TGG 0.453691 2.1:-17743624 MS.gene065242:CDS
AATGTTTCCATGGTTTGCTA+TGG 0.456397 2.1:-17744243 MS.gene065242:CDS
ATGGATGATAAGAATGAAGT+TGG 0.460815 2.1:-17743024 MS.gene065242:CDS
TCCATGGCTGTAGCAATAAG+AGG 0.461979 2.1:+17744011 None:intergenic
AAAGTTGTATTTGGTGGCTC+AGG 0.466161 2.1:+17743537 None:intergenic
TTGTTTATCTGTTTGATCCA+TGG 0.471266 2.1:+17743995 None:intergenic
CCCTCTTATTGCTACAGCCA+TGG 0.480560 2.1:-17744012 MS.gene065242:CDS
AACTTGATGCATGAATCATC+AGG 0.482297 2.1:+17743762 None:intergenic
GAAGTTGTTTCAGCATTATG+AGG 0.483600 2.1:+17744056 None:intergenic
TTGGTGCTATTGCCACGTCT+TGG 0.486194 2.1:-17743171 MS.gene065242:CDS
GTTGAGAAAGGTGATGAAGA+TGG 0.486792 2.1:-17743090 MS.gene065242:CDS
TACCTGAAGGGTTTAGTGAA+AGG 0.490614 2.1:-17743326 MS.gene065242:CDS
TTGGACCGAGTATCATGTAT+TGG 0.494245 2.1:+17743874 None:intergenic
TTGAAGATGCTTTACCTGAA+GGG 0.497840 2.1:-17743338 MS.gene065242:CDS
ATGTTTCCATGGTTTGCTAT+GGG 0.504571 2.1:-17744242 MS.gene065242:CDS
TGCACATAGCAATGTTTCCA+TGG 0.504753 2.1:-17744253 MS.gene065242:CDS
TTGTTGGAGAAGTGAAGATA+TGG 0.515979 2.1:+17744209 None:intergenic
TCAGATGCAGTTGCTTTCAA+AGG 0.518452 2.1:-17743642 MS.gene065242:CDS
CTTCAGTTAAATCTCTACCT+TGG 0.530118 2.1:+17743814 None:intergenic
ATTGAAGATGCTTTACCTGA+AGG 0.532564 2.1:-17743339 MS.gene065242:CDS
CTAGTTTGCTTACTGAAGCT+AGG 0.545779 2.1:+17743718 None:intergenic
ATGAGTTCAAAGTTCAAGGT+TGG 0.547219 2.1:-17743120 MS.gene065242:CDS
CTTCTATTATACGATCGCAT+TGG 0.549848 2.1:-17743681 MS.gene065242:CDS
TTCAAAGTTCAAGGTTGGTG+TGG 0.552940 2.1:-17743115 MS.gene065242:CDS
TTGAGAAAGGTGATGAAGAT+GGG 0.554445 2.1:-17743089 MS.gene065242:CDS
TAACATGAGGAACTGTGATA+GGG 0.557835 2.1:+17744087 None:intergenic
AAGGTTGTAGAGAAATTGAT+GGG 0.562891 2.1:-17743623 MS.gene065242:CDS
TGGAGCTGCTTCTATAACTG+AGG 0.562901 2.1:-17743214 MS.gene065242:CDS
CTCACAGAAACTATCAAGAC+AGG 0.563684 2.1:+17742936 None:intergenic
GGGATTCAAACATGGTTCTG+TGG 0.569145 2.1:-17743487 MS.gene065242:CDS
TTTGGTGGCTCAGGTAAAAG+AGG 0.569758 2.1:+17743546 None:intergenic
ATTGCTATGTGCAAAGGTGA+AGG 0.578682 2.1:+17744263 None:intergenic
TCTTGCATTCATGATATGAT+CGG 0.585265 2.1:+17743146 None:intergenic
CAAAGCTGTGAAAATTGTGA+TGG 0.587557 2.1:-17743043 MS.gene065242:CDS
GTTATGAAACATCCAACAGA+AGG 0.588945 2.1:+17743243 None:intergenic
GAATCATCAGGGAACTCTGA+AGG 0.590116 2.1:+17743774 None:intergenic
TGGCTTAAGGGATTCAAACA+TGG 0.590676 2.1:-17743495 MS.gene065242:CDS
ACTTGTTAACACGTGTCAGT+TGG 0.603876 2.1:-17743190 MS.gene065242:CDS
ATCAACTCAAATCCAATAGG+TGG 0.605154 2.1:+17743360 None:intergenic
AGCAAACTAGAGTTTGGCAG+TGG 0.611149 2.1:-17743705 MS.gene065242:CDS
ACTTGATGCATGAATCATCA+GGG 0.631590 2.1:+17743763 None:intergenic
TGTCTCCAATACATGATACT+CGG 0.631875 2.1:-17743879 MS.gene065242:CDS
GTTGGTGTGGAAGTTGAGAA+AGG 0.632692 2.1:-17743102 MS.gene065242:CDS
CCATGGCTGTAGCAATAAGA+GGG 0.634014 2.1:+17744012 None:intergenic
AAGTGTCCCATAGCAAACCA+TGG 0.639716 2.1:+17744236 None:intergenic
GGAGCTGCTTCTATAACTGA+GGG 0.647559 2.1:-17743213 MS.gene065242:CDS
GGAAACATTGCTATGTGCAA+AGG 0.662429 2.1:+17744257 None:intergenic
TGAGGAAGACCATTAACATG+AGG 0.685206 2.1:+17744074 None:intergenic
ATATGATCGGAACCAAGACG+TGG 0.688479 2.1:+17743159 None:intergenic
TTATGAAACATCCAACAGAA+GGG 0.698749 2.1:+17743244 None:intergenic
AATATACAAAGACAAAACCA+AGG 0.715036 2.1:-17743831 MS.gene065242:CDS
GGATGTTTCATAACACACTG+TGG 0.766209 2.1:-17743234 MS.gene065242:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTCTTTGATTTTCAATAT+TGG - chr2.1:17743252-17743271 MS.gene065242:CDS 15.0%
!! AAATCAAAGAAAACTATTTG+TGG + chr2.1:17743245-17743264 None:intergenic 20.0%
!!! AACTTTTTGAGTGTATTTTT+AGG + chr2.1:17743041-17743060 None:intergenic 20.0%
!!! ACTTTTTGAGTGTATTTTTA+GGG + chr2.1:17743040-17743059 None:intergenic 20.0%
!!! CAATAAAAAGTTTCTCATTT+TGG + chr2.1:17744212-17744231 None:intergenic 20.0%
! AATATACAAAGACAAAACCA+AGG - chr2.1:17743356-17743375 MS.gene065242:CDS 25.0%
! ATAAGAGGGAATAAAGAAAA+TGG + chr2.1:17743164-17743183 None:intergenic 25.0%
!! ACAAATTGAACTTCTTTTGA+AGG - chr2.1:17743211-17743230 MS.gene065242:CDS 25.0%
!! ATACAACTTTAGAGGAAAAA+TGG - chr2.1:17743663-17743682 MS.gene065242:CDS 25.0%
!! TACAACTTTAGAGGAAAAAT+GGG - chr2.1:17743664-17743683 MS.gene065242:CDS 25.0%
!! TGTATATTTTCAAAGTAAGC+TGG + chr2.1:17743344-17743363 None:intergenic 25.0%
!!! TTTTCCTCTAAAGTTGTATT+TGG + chr2.1:17743662-17743681 None:intergenic 25.0%
AAAGGAAAAGGGATTGTTTA+TGG - chr2.1:17743887-17743906 MS.gene065242:CDS 30.0%
AAAGGTTGTAGAGAAATTGA+TGG - chr2.1:17743563-17743582 MS.gene065242:CDS 30.0%
AAGGTTGTAGAGAAATTGAT+GGG - chr2.1:17743564-17743583 MS.gene065242:CDS 30.0%
AGAAACTGATTATGCTGTAA+TGG + chr2.1:17743752-17743771 None:intergenic 30.0%
ATGGATGATAAGAATGAAGT+TGG - chr2.1:17744163-17744182 MS.gene065242:CDS 30.0%
GACTATCTTCAAACTGTTTA+TGG - chr2.1:17743596-17743615 MS.gene065242:CDS 30.0%
GGGAAAAAGGTAATAAGATT+TGG + chr2.1:17743083-17743102 None:intergenic 30.0%
TCAAAGTAAGCTGGTAATAT+TGG + chr2.1:17743335-17743354 None:intergenic 30.0%
TCAATCAACTCAAATCCAAT+AGG + chr2.1:17743833-17743852 None:intergenic 30.0%
TCTTGCATTCATGATATGAT+CGG + chr2.1:17744044-17744063 None:intergenic 30.0%
TTATGAAACATCCAACAGAA+GGG + chr2.1:17743946-17743965 None:intergenic 30.0%
TTGTTTATCTGTTTGATCCA+TGG + chr2.1:17743195-17743214 None:intergenic 30.0%
AACTTGATGCATGAATCATC+AGG + chr2.1:17743428-17743447 None:intergenic 35.0%
AAGGGATTGTTTATGGAAGT+TGG - chr2.1:17743894-17743913 MS.gene065242:CDS 35.0%
ACTTGATGCATGAATCATCA+GGG + chr2.1:17743427-17743446 None:intergenic 35.0%
AGTGAAAGGGTTAAAGGAAA+AGG - chr2.1:17743875-17743894 MS.gene065242:CDS 35.0%
AGTGATGAGTTCAAAGTTCA+AGG - chr2.1:17744063-17744082 MS.gene065242:CDS 35.0%
ATCAACTCAAATCCAATAGG+TGG + chr2.1:17743830-17743849 None:intergenic 35.0%
ATCACAGTTCCTCATGTTAA+TGG - chr2.1:17743104-17743123 MS.gene065242:CDS 35.0%
ATGAGTTCAAAGTTCAAGGT+TGG - chr2.1:17744067-17744086 MS.gene065242:CDS 35.0%
ATTGAAGATGCTTTACCTGA+AGG - chr2.1:17743848-17743867 MS.gene065242:CDS 35.0%
CAAAGCTGTGAAAATTGTGA+TGG - chr2.1:17744144-17744163 MS.gene065242:CDS 35.0%
CCAAACTTGACTCAAAAACT+TGG - chr2.1:17743278-17743297 MS.gene065242:CDS 35.0%
CTTCAGTTAAATCTCTACCT+TGG + chr2.1:17743376-17743395 None:intergenic 35.0%
CTTCTATTATACGATCGCAT+TGG - chr2.1:17743506-17743525 MS.gene065242:CDS 35.0%
GTGAAAGGGTTAAAGGAAAA+GGG - chr2.1:17743876-17743895 MS.gene065242:CDS 35.0%
GTTATGAAACATCCAACAGA+AGG + chr2.1:17743947-17743966 None:intergenic 35.0%
TAACATGAGGAACTGTGATA+GGG + chr2.1:17743103-17743122 None:intergenic 35.0%
TCAGTAAGCAAACTAGAGTT+TGG - chr2.1:17743476-17743495 MS.gene065242:CDS 35.0%
TCCAACAAGTTAGCATTAAG+AGG - chr2.1:17742993-17743012 MS.gene065242:CDS 35.0%
TCTGTGGTTTATTGTGCATA+TGG - chr2.1:17743716-17743735 MS.gene065242:CDS 35.0%
TGTCTCCAATACATGATACT+CGG - chr2.1:17743308-17743327 MS.gene065242:CDS 35.0%
TTAACATGAGGAACTGTGAT+AGG + chr2.1:17743104-17743123 None:intergenic 35.0%
TTATACGATCGCATTGGAAT+AGG - chr2.1:17743512-17743531 MS.gene065242:CDS 35.0%
TTGAAGATGCTTTACCTGAA+GGG - chr2.1:17743849-17743868 MS.gene065242:CDS 35.0%
TTGAGAAAGGTGATGAAGAT+GGG - chr2.1:17744098-17744117 MS.gene065242:CDS 35.0%
TTGTTGGAGAAGTGAAGATA+TGG + chr2.1:17742981-17743000 None:intergenic 35.0%
! ACCTCTTAATGCTAACTTGT+TGG + chr2.1:17742997-17743016 None:intergenic 35.0%
! GAAGTTGTTTCAGCATTATG+AGG + chr2.1:17743134-17743153 None:intergenic 35.0%
!! AATGTTTCCATGGTTTGCTA+TGG - chr2.1:17742944-17742963 MS.gene065242:CDS 35.0%
!! ATGTTTCCATGGTTTGCTAT+GGG - chr2.1:17742945-17742964 MS.gene065242:CDS 35.0%
!! TCCTCTAAAGTTGTATTTGG+TGG + chr2.1:17743659-17743678 None:intergenic 35.0%
!! TTGCTTGGTCTTGAATTAAC+AGG - chr2.1:17743779-17743798 MS.gene065242:CDS 35.0%
!!! ATTTTAGAACACCCTTCTGT+TGG - chr2.1:17743932-17743951 MS.gene065242:CDS 35.0%
!!! CCAAGTTTTTGAGTCAAGTT+TGG + chr2.1:17743281-17743300 None:intergenic 35.0%
ACCTGAAGGGTTTAGTGAAA+GGG - chr2.1:17743862-17743881 MS.gene065242:CDS 40.0%
AGGAACTGTGATAGGGAAAA+AGG + chr2.1:17743096-17743115 None:intergenic 40.0%
ATTGCTATGTGCAAAGGTGA+AGG + chr2.1:17742927-17742946 None:intergenic 40.0%
CTCACAGAAACTATCAAGAC+AGG + chr2.1:17744254-17744273 None:intergenic 40.0%
GCCACCAAATACAACTTTAG+AGG - chr2.1:17743655-17743674 MS.gene065242:CDS 40.0%
GGAAACATTGCTATGTGCAA+AGG + chr2.1:17742933-17742952 None:intergenic 40.0%
GGATGTTTCATAACACACTG+TGG - chr2.1:17743953-17743972 MS.gene065242:CDS 40.0%
GGGTTTAGTGAAAGGGTTAA+AGG - chr2.1:17743869-17743888 MS.gene065242:CDS 40.0%
GTTGAGAAAGGTGATGAAGA+TGG - chr2.1:17744097-17744116 MS.gene065242:CDS 40.0%
TACCTGAAGGGTTTAGTGAA+AGG - chr2.1:17743861-17743880 MS.gene065242:CDS 40.0%
TGAGGAAGACCATTAACATG+AGG + chr2.1:17743116-17743135 None:intergenic 40.0%
TGCACATAGCAATGTTTCCA+TGG - chr2.1:17742934-17742953 MS.gene065242:CDS 40.0%
TGGCTTAAGGGATTCAAACA+TGG - chr2.1:17743692-17743711 MS.gene065242:CDS 40.0%
TTGGACCGAGTATCATGTAT+TGG + chr2.1:17743316-17743335 None:intergenic 40.0%
! AAAGTTGTATTTGGTGGCTC+AGG + chr2.1:17743653-17743672 None:intergenic 40.0%
! ACTTGTTAACACGTGTCAGT+TGG - chr2.1:17743997-17744016 MS.gene065242:CDS 40.0%
! TCAGATGCAGTTGCTTTCAA+AGG - chr2.1:17743545-17743564 MS.gene065242:CDS 40.0%
!! AAAATGGGTTGCATGGCTTA+AGG - chr2.1:17743679-17743698 MS.gene065242:CDS 40.0%
!! AAATGGGTTGCATGGCTTAA+GGG - chr2.1:17743680-17743699 MS.gene065242:CDS 40.0%
!! CTAGTTTGCTTACTGAAGCT+AGG + chr2.1:17743472-17743491 None:intergenic 40.0%
!! TAGAGGAAAAATGGGTTGCA+TGG - chr2.1:17743672-17743691 MS.gene065242:CDS 40.0%
!! TTCAAAGTTCAAGGTTGGTG+TGG - chr2.1:17744072-17744091 MS.gene065242:CDS 40.0%
AAGTGTCCCATAGCAAACCA+TGG + chr2.1:17742954-17742973 None:intergenic 45.0%
ACCCTTTCACTAAACCCTTC+AGG + chr2.1:17743866-17743885 None:intergenic 45.0%
AGCAAACTAGAGTTTGGCAG+TGG - chr2.1:17743482-17743501 MS.gene065242:CDS 45.0%
ATATGATCGGAACCAAGACG+TGG + chr2.1:17744031-17744050 None:intergenic 45.0%
CCATGGCTGTAGCAATAAGA+GGG + chr2.1:17743178-17743197 None:intergenic 45.0%
GAATCATCAGGGAACTCTGA+AGG + chr2.1:17743416-17743435 None:intergenic 45.0%
GGAAAACCTGTTCTGCTTTC+AGG - chr2.1:17743617-17743636 MS.gene065242:CDS 45.0%
GGAGCTGCTTCTATAACTGA+GGG - chr2.1:17743974-17743993 MS.gene065242:CDS 45.0%
GTTGGTGTGGAAGTTGAGAA+AGG - chr2.1:17744085-17744104 MS.gene065242:CDS 45.0%
TCCATGGCTGTAGCAATAAG+AGG + chr2.1:17743179-17743198 None:intergenic 45.0%
TGGAGCTGCTTCTATAACTG+AGG - chr2.1:17743973-17743992 MS.gene065242:CDS 45.0%
! GGCTTAAGTGCTGCAAGAAA+TGG + chr2.1:17743809-17743828 None:intergenic 45.0%
! GGGATTCAAACATGGTTCTG+TGG - chr2.1:17743700-17743719 MS.gene065242:CDS 45.0%
! TTTGGTGGCTCAGGTAAAAG+AGG + chr2.1:17743644-17743663 None:intergenic 45.0%
!! CAGTTTCTAGAGCTGTTGCT+TGG - chr2.1:17743764-17743783 MS.gene065242:CDS 45.0%
AGAGGACCTGAAAGCAGAAC+AGG + chr2.1:17743626-17743645 None:intergenic 50.0%
CCCTCTTATTGCTACAGCCA+TGG - chr2.1:17743175-17743194 MS.gene065242:CDS 50.0%
GCAGCACTTAAGCCACCTAT+TGG - chr2.1:17743815-17743834 MS.gene065242:CDS 50.0%
!! TTGGTGCTATTGCCACGTCT+TGG - chr2.1:17744016-17744035 MS.gene065242:CDS 50.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 17742915 17744294 17742915 ID=MS.gene065242
chr2.1 mRNA 17742915 17744294 17742915 ID=MS.gene065242.t1;Parent=MS.gene065242
chr2.1 exon 17742915 17744294 17742915 ID=MS.gene065242.t1.exon1;Parent=MS.gene065242.t1
chr2.1 CDS 17742915 17744294 17742915 ID=cds.MS.gene065242.t1;Parent=MS.gene065242.t1
Gene Sequence

>MS.gene065242

ATGGATGCTCCTTCACCTTTGCACATAGCAATGTTTCCATGGTTTGCTATGGGACACTTGACACCATATCTTCACTTCTCCAACAAGTTAGCATTAAGAGGTCACAAAATCTCATTCTTCATCCCTAAAAATACACTCAAAAAGTTACAACATCTCAATCTTCATCCAAATCTTATTACCTTTTTCCCTATCACAGTTCCTCATGTTAATGGTCTTCCTCATAATGCTGAAACAACTTCAGATGTACCATTTTCTTTATTCCCTCTTATTGCTACAGCCATGGATCAAACAGATAAACAAATTGAACTTCTTTTGAAGGAGTTAAAGCCACAAATAGTTTTCTTTGATTTTCAATATTGGCTACCAAACTTGACTCAAAAACTTGGCATCAAATGTCTCCAATACATGATACTCGGTCCAATATTACCAGCTTACTTTGAAAATATACAAAGACAAAACCAAGGTAGAGATTTAACTGAAGTTGATCTCAAGAAACATCCTTCAGAGTTCCCTGATGATTCATGCATCAAGTTTCATTCTCACGAACTTCGATTCCTAGCTTCAGTAAGCAAACTAGAGTTTGGCAGTGGTCTTCTATTATACGATCGCATTGGAATAGGAACAAACTTGTCAGATGCAGTTGCTTTCAAAGGTTGTAGAGAAATTGATGGGATATATGCTGACTATCTTCAAACTGTTTATGGAAAACCTGTTCTGCTTTCAGGTCCTCTTTTACCTGAGCCACCAAATACAACTTTAGAGGAAAAATGGGTTGCATGGCTTAAGGGATTCAAACATGGTTCTGTGGTTTATTGTGCATATGGAAGTGAAAGTCCATTACAGCATAATCAGTTTCTAGAGCTGTTGCTTGGTCTTGAATTAACAGGTTTTCCATTTCTTGCAGCACTTAAGCCACCTATTGGATTTGAGTTGATTGAAGATGCTTTACCTGAAGGGTTTAGTGAAAGGGTTAAAGGAAAAGGGATTGTTTATGGAAGTTGGATTCAACAACAATTGATTTTAGAACACCCTTCTGTTGGATGTTTCATAACACACTGTGGAGCTGCTTCTATAACTGAGGGACTTGTTAACACGTGTCAGTTGGTGCTATTGCCACGTCTTGGTTCCGATCATATCATGAATGCAAGAGTGATGAGTTCAAAGTTCAAGGTTGGTGTGGAAGTTGAGAAAGGTGATGAAGATGGGTTGTTTACAAAAGAAAGTGTGTGCAAAGCTGTGAAAATTGTGATGGATGATAAGAATGAAGTTGGAAAAGAAGTAAGAGATAATCATGCCAAAATGAGAAACTTTTTATTGAGCAGCAACTTAGAATCTTCCTGTCTTGATAGTTTCTGTGAGAAACTCTATGATTTGCTCTAG

Protein sequence

>MS.gene065242.t1

MDAPSPLHIAMFPWFAMGHLTPYLHFSNKLALRGHKISFFIPKNTLKKLQHLNLHPNLITFFPITVPHVNGLPHNAETTSDVPFSLFPLIATAMDQTDKQIELLLKELKPQIVFFDFQYWLPNLTQKLGIKCLQYMILGPILPAYFENIQRQNQGRDLTEVDLKKHPSEFPDDSCIKFHSHELRFLASVSKLEFGSGLLLYDRIGIGTNLSDAVAFKGCREIDGIYADYLQTVYGKPVLLSGPLLPEPPNTTLEEKWVAWLKGFKHGSVVYCAYGSESPLQHNQFLELLLGLELTGFPFLAALKPPIGFELIEDALPEGFSERVKGKGIVYGSWIQQQLILEHPSVGCFITHCGAASITEGLVNTCQLVLLPRLGSDHIMNARVMSSKFKVGVEVEKGDEDGLFTKESVCKAVKIVMDDKNEVGKEVRDNHAKMRNFLLSSNLESSCLDSFCEKLYDLL