AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene073186


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene073186.t1 MTR_2g083480 93.013 458 32 0 1 458 1 458 0.0 872
MS.gene073186.t1 MTR_2g083420 79.039 458 72 1 1 458 1 434 0.0 750
MS.gene073186.t1 MTR_2g083390 78.384 458 75 1 1 458 1 434 0.0 743
MS.gene073186.t1 MTR_2g083430 78.384 458 99 0 1 458 1 458 0.0 723
MS.gene073186.t1 MTR_2g083380 66.376 458 154 0 1 458 18 475 0.0 631
MS.gene073186.t1 MTR_2g083490 65.284 458 159 0 1 458 1 458 0.0 624
MS.gene073186.t1 MTR_4g079270 60.000 460 180 3 1 458 1 458 0.0 586
MS.gene073186.t1 MTR_4g079250 60.435 460 178 3 1 458 1 458 0.0 585
MS.gene073186.t1 MTR_2g014900 59.424 451 182 1 8 458 7 456 0.0 555
MS.gene073186.t1 MTR_2g083360 61.369 453 70 4 6 458 27 374 0.0 528
MS.gene073186.t1 MTR_1g090270 41.901 463 245 11 7 457 14 464 7.58e-116 348
MS.gene073186.t1 MTR_2g086283 56.078 255 60 2 203 457 133 335 7.49e-91 280
MS.gene073186.t1 MTR_2g086283 62.044 137 51 1 11 147 1 136 1.75e-51 177
MS.gene073186.t1 MTR_4g059370 41.104 326 179 6 139 457 72 391 1.72e-80 254
MS.gene073186.t1 MTR_8g068360 32.128 470 298 12 2 458 6 467 2.97e-67 223
MS.gene073186.t1 MTR_4g123553 32.468 462 282 14 6 454 13 457 3.75e-66 219
MS.gene073186.t1 MTR_8g068330 31.290 473 301 14 1 458 1 464 5.60e-66 219
MS.gene073186.t1 MTR_8g068340 31.478 467 298 12 2 454 6 464 1.72e-64 215
MS.gene073186.t1 MTR_7g067330 31.670 461 269 14 2 454 3 425 3.25e-64 213
MS.gene073186.t1 MTR_2g014930 42.069 290 86 6 17 305 9 217 9.37e-64 206
MS.gene073186.t1 MTR_7g067120 32.609 460 260 15 2 451 3 422 3.05e-63 211
MS.gene073186.t1 MTR_2g008225 31.760 466 295 13 2 455 9 463 2.91e-62 209
MS.gene073186.t1 MTR_2g008226 33.049 469 284 16 6 454 8 466 1.61e-61 207
MS.gene073186.t1 MTR_2g008220 31.974 466 294 14 2 455 8 462 2.87e-61 207
MS.gene073186.t1 MTR_4g079280 42.982 228 85 2 11 238 1 183 2.71e-59 192
MS.gene073186.t1 MTR_6g036650 30.426 470 298 14 1 454 11 467 5.57e-58 198
MS.gene073186.t1 MTR_6g042310 30.621 467 282 16 7 454 17 460 1.98e-57 197
MS.gene073186.t1 MTR_2g046620 31.169 462 288 14 6 454 14 458 9.27e-57 195
MS.gene073186.t1 MTR_2g083440 76.471 102 24 0 357 458 11 112 1.30e-49 165
MS.gene073186.t1 MTR_4g077960 29.621 449 276 17 17 447 1 427 2.73e-49 174
MS.gene073186.t1 MTR_1g090280 42.788 208 107 5 261 457 108 314 8.92e-46 161
MS.gene073186.t1 MTR_8g007650 30.085 472 295 17 7 456 6 464 9.93e-46 165
MS.gene073186.t1 MTR_8g007565 29.873 472 296 17 7 456 6 464 1.03e-45 165
MS.gene073186.t1 MTR_5g066410 28.571 469 283 14 11 456 1 440 1.60e-44 161
MS.gene073186.t1 MTR_8g066610 27.957 465 289 14 1 433 1 451 4.50e-37 142
MS.gene073186.t1 MTR_8g071070 27.310 487 301 16 5 457 4 471 1.27e-35 138
MS.gene073186.t1 MTR_2g098430 26.087 460 301 14 9 440 7 455 1.81e-32 129
MS.gene073186.t1 MTR_8g009055 28.947 456 278 17 7 434 5 442 9.25e-32 127
MS.gene073186.t1 MTR_1g062380 27.564 468 285 19 5 432 13 466 2.51e-30 123
MS.gene073186.t1 MTR_4g031800 25.662 491 302 16 6 458 7 472 5.25e-30 122
MS.gene073186.t1 MTR_8g009050 28.723 470 261 17 7 434 5 442 6.24e-30 121
MS.gene073186.t1 MTR_5g045970 26.767 467 289 15 5 432 13 465 9.01e-30 121
MS.gene073186.t1 MTR_0009s0240 26.637 443 290 15 5 427 4 431 3.13e-29 119
MS.gene073186.t1 MTR_6g005600 29.565 345 186 11 123 436 124 442 5.40e-29 119
MS.gene073186.t1 MTR_7g070660 24.208 442 300 12 7 421 10 443 8.21e-29 119
MS.gene073186.t1 MTR_6g023665 25.901 444 293 12 9 428 14 445 8.65e-29 118
MS.gene073186.t1 MTR_6g488280 36.318 201 114 4 241 428 239 438 1.19e-28 118
MS.gene073186.t1 MTR_0428s0010 36.318 201 114 4 241 428 239 438 1.19e-28 118
MS.gene073186.t1 MTR_5g087620 25.786 477 301 17 8 443 10 474 1.21e-28 118
MS.gene073186.t1 MTR_3g435310 37.306 193 114 5 258 450 227 412 1.22e-28 117
MS.gene073186.t1 MTR_3g435310 32.353 136 87 4 6 138 16 149 8.69e-16 79.7
MS.gene073186.t1 MTR_7g013220 26.840 462 283 19 8 444 5 436 3.75e-28 116
MS.gene073186.t1 MTR_0184s0030 36.842 209 113 6 237 428 234 440 7.21e-28 115
MS.gene073186.t1 MTR_8g008990 28.238 471 264 19 7 434 5 444 1.07e-27 115
MS.gene073186.t1 MTR_8g027885 27.292 480 252 19 6 436 16 447 1.33e-27 115
MS.gene073186.t1 MTR_8g027870 27.215 474 260 18 6 436 16 447 1.65e-27 115
MS.gene073186.t1 MTR_8g009073 27.593 482 292 19 7 457 5 460 4.52e-27 113
MS.gene073186.t1 MTR_7g070740 25.212 472 285 17 7 433 10 458 7.12e-27 113
MS.gene073186.t1 MTR_3g009510 33.641 217 125 5 236 436 241 454 1.23e-26 112
MS.gene073186.t1 MTR_0078s0060 28.470 281 171 8 167 436 181 442 1.94e-26 111
MS.gene073186.t1 MTR_7g013180 26.116 448 288 14 8 432 5 432 2.08e-26 111
MS.gene073186.t1 MTR_4g485630 25.597 461 292 15 7 436 8 448 2.31e-26 111
MS.gene073186.t1 MTR_7g013200 26.211 454 285 16 8 444 5 425 2.71e-26 110
MS.gene073186.t1 MTR_4g485590 27.384 409 239 13 8 394 9 381 3.02e-26 110
MS.gene073186.t1 MTR_8g012635 33.803 213 120 5 235 428 235 445 3.54e-26 110
MS.gene073186.t1 MTR_4g485620 25.917 436 289 15 22 433 3 428 3.64e-26 110
MS.gene073186.t1 MTR_8g006270 28.369 282 170 7 167 435 178 440 3.91e-26 110
MS.gene073186.t1 MTR_6g038200 26.681 461 275 20 8 440 11 436 4.10e-26 110
MS.gene073186.t1 MTR_7g102550 26.749 486 300 20 8 452 9 479 5.76e-26 110
MS.gene073186.t1 MTR_8g006730 25.225 444 300 13 8 428 6 440 6.18e-26 110
MS.gene073186.t1 MTR_1g019510 28.571 441 268 19 7 419 5 426 6.73e-26 110
MS.gene073186.t1 MTR_8g009063 27.669 459 281 18 7 436 12 448 7.01e-26 110
MS.gene073186.t1 MTR_7g117170 38.798 183 96 5 257 427 266 444 9.64e-26 109
MS.gene073186.t1 MTR_8g465670 27.312 465 251 19 9 424 8 434 1.06e-25 109
MS.gene073186.t1 MTR_8g009073 32.530 249 147 7 223 457 90 331 1.10e-25 107
MS.gene073186.t1 MTR_2g046820 34.783 230 136 6 236 454 236 462 1.60e-25 108
MS.gene073186.t1 MTR_7g070610 23.881 469 293 16 7 434 12 457 1.88e-25 109
MS.gene073186.t1 MTR_6g038230 26.304 460 278 20 8 440 11 436 1.91e-25 108
MS.gene073186.t1 MTR_7g117405 27.371 464 279 20 8 433 12 455 1.92e-25 108
MS.gene073186.t1 MTR_6g038220 25.877 456 284 17 8 440 11 435 2.08e-25 108
MS.gene073186.t1 MTR_6g033615 30.802 237 142 6 216 434 194 426 2.28e-25 108
MS.gene073186.t1 MTR_0184s0040 34.021 194 114 5 253 436 269 458 2.78e-25 108
MS.gene073186.t1 MTR_0078s0190 34.021 194 114 5 253 436 269 458 2.78e-25 108
MS.gene073186.t1 MTR_8g012650 33.028 218 125 5 235 435 235 448 3.76e-25 108
MS.gene073186.t1 MTR_8g466240 27.273 429 251 20 1 398 1 399 4.56e-25 107
MS.gene073186.t1 MTR_7g046490 33.460 263 145 9 183 432 194 439 5.73e-25 107
MS.gene073186.t1 MTR_8g012730 33.641 217 125 5 228 428 69 282 7.00e-25 104
MS.gene073186.t1 MTR_5g035560 24.792 480 295 16 7 456 10 453 1.02e-24 107
MS.gene073186.t1 MTR_1g019520 36.782 174 97 3 257 419 4 175 1.40e-24 101
MS.gene073186.t1 MTR_6g033725 35.176 199 116 6 241 434 247 437 1.59e-24 106
MS.gene073186.t1 MTR_8g006710 24.161 447 298 14 9 428 7 439 1.94e-24 105
MS.gene073186.t1 MTR_1g107350 25.270 463 298 16 1 434 1 444 2.98e-24 105
MS.gene073186.t1 MTR_2g046750 34.783 230 136 6 236 454 239 465 3.26e-24 105
MS.gene073186.t1 MTR_8g006220 25.983 458 274 16 9 424 7 441 4.02e-24 105
MS.gene073186.t1 MTR_7g055710 23.707 464 299 14 7 434 10 454 4.08e-24 105
MS.gene073186.t1 MTR_4g024020 26.039 457 296 15 7 428 8 457 5.64e-24 104
MS.gene073186.t1 MTR_7g102460 26.180 466 281 18 7 428 8 454 5.86e-24 104
MS.gene073186.t1 MTR_5g035580 32.850 207 129 5 252 458 257 453 1.03e-23 103
MS.gene073186.t1 MTR_6g033625 27.312 465 270 20 9 434 5 440 1.22e-23 103
MS.gene073186.t1 MTR_2g034990 24.781 456 296 15 1 422 4 446 1.32e-23 103
MS.gene073186.t1 MTR_6g038240 33.516 182 110 6 254 435 261 431 1.59e-23 103
MS.gene073186.t1 MTR_7g071040 23.355 471 307 13 5 439 14 466 2.04e-23 103
MS.gene073186.t1 MTR_7g070910 23.441 465 304 14 5 434 8 455 2.13e-23 103
MS.gene073186.t1 MTR_4g117950 25.393 445 283 14 6 422 4 427 5.21e-23 101
MS.gene073186.t1 MTR_2g035020 25.053 471 300 17 1 436 4 456 6.75e-23 101
MS.gene073186.t1 MTR_8g012630 34.043 188 106 4 257 428 204 389 7.28e-23 100
MS.gene073186.t1 MTR_8g077590 29.577 284 163 7 155 427 180 437 8.06e-23 101
MS.gene073186.t1 MTR_8g009067 33.511 188 111 4 257 434 257 440 1.29e-22 100
MS.gene073186.t1 MTR_7g102560 24.847 491 284 16 1 436 1 461 1.33e-22 100
MS.gene073186.t1 MTR_7g013260 25.296 423 285 16 8 420 6 407 1.35e-22 100
MS.gene073186.t1 MTR_8g009067 33.511 188 111 4 257 434 139 322 1.41e-22 99.0
MS.gene073186.t1 MTR_1g107315 26.856 458 282 18 1 428 1 435 1.51e-22 100
MS.gene073186.t1 MTR_4g117980 24.313 473 300 18 6 437 9 464 1.63e-22 100
MS.gene073186.t1 MTR_3g049970 26.782 463 287 19 3 434 4 445 1.74e-22 100
MS.gene073186.t1 MTR_0078s0010 32.973 185 112 4 253 427 254 436 2.25e-22 99.8
MS.gene073186.t1 MTR_7g070940 22.921 445 311 12 7 428 8 443 2.29e-22 99.8
MS.gene073186.t1 MTR_7g070810 24.832 447 289 13 7 421 8 439 2.37e-22 99.8
MS.gene073186.t1 MTR_0536s0020 25.322 466 275 17 7 428 17 453 2.56e-22 99.8
MS.gene073186.t1 MTR_2g040530 31.466 232 146 5 233 454 236 464 2.59e-22 99.8
MS.gene073186.t1 MTR_7g013240 26.829 451 277 22 8 440 6 421 2.86e-22 99.4
MS.gene073186.t1 MTR_0536s0010 25.877 456 281 18 6 428 19 450 3.00e-22 99.8
MS.gene073186.t1 MTR_6g038300 24.565 460 279 18 8 436 11 433 4.09e-22 99.0
MS.gene073186.t1 MTR_7g070800 22.833 473 296 14 5 433 3 450 4.11e-22 99.4
MS.gene073186.t1 MTR_3g069690 32.787 183 114 5 253 434 251 425 7.23e-22 98.2
MS.gene073186.t1 MTR_7g071050 24.364 472 281 17 7 455 12 430 8.17e-22 97.8
MS.gene073186.t1 MTR_8g074550 23.077 494 290 19 1 434 1 464 1.36e-21 97.8
MS.gene073186.t1 MTR_7g102490 25.764 458 295 16 7 428 8 456 1.48e-21 97.4
MS.gene073186.t1 MTR_5g045960 25.314 478 299 19 7 443 8 468 1.57e-21 97.4
MS.gene073186.t1 MTR_5g027210 26.568 271 162 6 212 450 212 477 2.01e-21 97.1
MS.gene073186.t1 MTR_3g009490 36.527 167 90 4 283 436 3 166 2.29e-21 92.0
MS.gene073186.t1 MTR_6g033675 32.020 203 130 5 236 434 242 440 2.30e-21 97.1
MS.gene073186.t1 MTR_6g035185 22.965 479 304 15 1 434 4 462 2.59e-21 96.7
MS.gene073186.t1 MTR_8g083280 30.631 222 137 7 241 456 249 459 2.64e-21 96.7
MS.gene073186.t1 MTR_4g117890 25.253 495 298 20 7 456 12 479 3.09e-21 96.7
MS.gene073186.t1 MTR_8g088560 23.361 488 299 18 5 454 7 457 4.78e-21 95.9
MS.gene073186.t1 MTR_5g098930 27.459 244 152 6 236 456 228 469 5.09e-21 95.9
MS.gene073186.t1 MTR_6g033660 34.831 178 110 4 259 434 266 439 5.68e-21 95.5
MS.gene073186.t1 MTR_3g079480 24.512 461 285 21 8 428 21 458 6.06e-21 95.5
MS.gene073186.t1 MTR_4g094920 30.769 208 135 6 253 454 275 479 7.61e-21 95.5
MS.gene073186.t1 MTR_6g035265 23.176 466 300 15 6 434 9 453 8.25e-21 95.1
MS.gene073186.t1 MTR_7g047030 32.447 188 113 5 257 434 258 441 8.34e-21 95.1
MS.gene073186.t1 MTR_7g047270 32.447 188 113 5 257 434 258 441 8.34e-21 95.1
MS.gene073186.t1 MTR_5g090700 31.250 224 131 7 236 438 239 460 8.79e-21 95.1
MS.gene073186.t1 MTR_5g090610 29.070 258 155 9 206 438 190 444 9.61e-21 94.7
MS.gene073186.t1 MTR_8g006260 31.795 195 113 7 259 435 263 455 1.71e-20 94.4
MS.gene073186.t1 MTR_7g070780 22.629 464 308 14 5 434 8 454 1.98e-20 94.0
MS.gene073186.t1 MTR_7g070930 22.947 475 311 14 1 433 1 462 2.27e-20 94.0
MS.gene073186.t1 MTR_2g059240 24.766 428 267 14 2 397 8 412 2.33e-20 93.6
MS.gene073186.t1 MTR_4g128720 25.561 446 298 17 7 440 14 437 2.65e-20 93.6
MS.gene073186.t1 MTR_5g067170 33.679 193 110 6 253 428 262 453 2.78e-20 93.6
MS.gene073186.t1 MTR_7g102520 26.667 435 281 16 7 413 11 435 2.83e-20 93.6
MS.gene073186.t1 MTR_5g019580 30.522 249 145 8 232 456 233 477 2.93e-20 93.6
MS.gene073186.t1 MTR_5g019580 30.522 249 145 8 232 456 257 501 3.44e-20 93.6
MS.gene073186.t1 MTR_4g095008 30.288 208 136 6 253 454 260 464 3.45e-20 93.6
MS.gene073186.t1 MTR_8g083290 32.632 190 116 6 246 434 261 439 3.59e-20 93.2
MS.gene073186.t1 MTR_8g008970 28.788 264 157 6 184 434 195 440 3.81e-20 94.0
MS.gene073186.t1 MTR_8g008970 29.924 264 149 9 178 436 531 763 1.19e-18 89.4
MS.gene073186.t1 MTR_5g090660 28.761 226 138 6 234 438 233 456 6.34e-20 92.8
MS.gene073186.t1 MTR_8g064880 25.664 452 266 17 5 412 6 431 7.15e-20 92.4
MS.gene073186.t1 MTR_8g012745 31.163 215 125 7 237 436 237 443 7.80e-20 92.0
MS.gene073186.t1 MTR_4g485640 30.603 232 134 8 220 428 409 636 8.14e-20 92.8
MS.gene073186.t1 MTR_8g044140 23.500 400 230 12 64 416 37 407 8.30e-20 92.0
MS.gene073186.t1 MTR_5g090620 28.033 239 141 6 229 438 223 459 9.53e-20 92.0
MS.gene073186.t1 MTR_1g107360 30.973 226 134 6 220 434 223 437 1.22e-19 91.7
MS.gene073186.t1 MTR_7g102450 25.055 455 283 19 8 428 11 441 1.33e-19 91.7
MS.gene073186.t1 MTR_3g479520 24.752 505 302 23 1 454 1 478 1.64e-19 91.3
MS.gene073186.t1 MTR_5g098960 35.638 188 100 8 229 402 225 405 2.42e-19 90.5
MS.gene073186.t1 MTR_1g029540 23.009 452 295 17 13 440 19 441 2.89e-19 90.5
MS.gene073186.t1 MTR_5g090630 30.594 219 129 8 241 438 233 449 3.15e-19 90.5
MS.gene073186.t1 MTR_1g032490 25.275 455 291 18 2 428 4 437 4.47e-19 89.7
MS.gene073186.t1 MTR_4g108250 22.222 468 311 12 7 436 10 462 4.48e-19 90.1
MS.gene073186.t1 MTR_5g029800 24.416 471 297 17 1 428 4 458 6.27e-19 89.4
MS.gene073186.t1 MTR_2g035040 30.928 194 115 5 257 436 173 361 7.88e-19 88.6
MS.gene073186.t1 MTR_4g082810 27.423 423 255 12 7 397 6 408 8.12e-19 88.6
MS.gene073186.t1 MTR_3g069710 33.333 180 108 6 257 434 258 427 9.08e-19 89.0
MS.gene073186.t1 MTR_8g064870 24.784 464 293 18 5 434 8 449 9.32e-19 89.0
MS.gene073186.t1 MTR_0288s0020 25.314 478 256 19 8 429 10 442 1.10e-18 88.6
MS.gene073186.t1 MTR_5g090580 27.308 260 157 8 206 438 204 458 1.12e-18 88.6
MS.gene073186.t1 MTR_3g084520 27.397 219 130 7 241 436 238 450 1.17e-18 88.6
MS.gene073186.t1 MTR_3g084540 27.014 211 142 4 253 456 266 471 1.24e-18 88.6
MS.gene073186.t1 MTR_4g117960 23.591 479 294 19 1 436 6 455 1.60e-18 88.2
MS.gene073186.t1 MTR_7g080950 31.746 189 116 7 253 441 253 428 2.07e-18 87.8
MS.gene073186.t1 MTR_8g032950 23.555 467 300 18 6 436 10 455 2.41e-18 87.8
MS.gene073186.t1 MTR_4g128690 32.967 182 109 5 253 434 260 428 3.18e-18 87.0
MS.gene073186.t1 MTR_3g084530 29.319 191 122 5 253 436 266 450 3.49e-18 87.0
MS.gene073186.t1 MTR_6g013900 33.146 178 105 6 253 428 283 448 3.82e-18 87.0
MS.gene073186.t1 MTR_7g012120 24.236 458 293 15 1 422 9 448 4.75e-18 87.0
MS.gene073186.t1 MTR_7g011470 29.200 250 143 9 201 434 206 437 4.75e-18 86.7
MS.gene073186.t1 MTR_7g011470 29.200 250 143 9 201 434 210 441 4.84e-18 86.7
MS.gene073186.t1 MTR_7g080935 23.851 457 293 16 7 440 10 434 4.86e-18 86.7
MS.gene073186.t1 MTR_0891s0010 29.825 171 111 4 257 427 97 258 7.71e-18 84.3
MS.gene073186.t1 MTR_8g090095 28.511 235 150 7 221 440 230 461 8.40e-18 85.9
MS.gene073186.t1 MTR_7g080940 29.947 187 120 5 254 440 259 434 8.78e-18 85.9
MS.gene073186.t1 MTR_3g479610 27.586 203 137 5 257 458 120 313 1.07e-17 84.3
MS.gene073186.t1 MTR_5g016480 26.794 209 147 5 251 456 267 472 1.47e-17 85.1
MS.gene073186.t1 MTR_5g070040 32.579 221 131 10 221 428 228 443 1.50e-17 85.1
MS.gene073186.t1 MTR_1g107365 30.846 201 113 7 227 412 258 447 1.70e-17 85.1
MS.gene073186.t1 MTR_5g090670 27.500 200 125 4 257 438 263 460 1.72e-17 85.1
MS.gene073186.t1 MTR_6g014170 30.102 196 123 6 253 446 266 449 1.79e-17 85.1
MS.gene073186.t1 MTR_7g070860 21.322 469 290 13 7 433 6 437 2.94e-17 84.3
MS.gene073186.t1 MTR_1g107375 29.565 230 132 8 220 434 215 429 2.96e-17 84.3
MS.gene073186.t1 MTR_4g008630 27.083 240 160 6 210 437 205 441 3.72e-17 84.0
MS.gene073186.t1 MTR_3g031450 25.893 224 136 6 220 428 213 421 3.78e-17 84.0
MS.gene073186.t1 MTR_7g470610 33.333 144 92 3 253 394 128 269 4.10e-17 82.0
MS.gene073186.t1 MTR_7g070583 33.333 144 92 3 253 394 128 269 4.10e-17 82.0
MS.gene073186.t1 MTR_5g016660 22.894 463 288 18 12 427 14 454 4.11e-17 84.0
MS.gene073186.t1 MTR_2g008210 32.386 176 110 6 253 427 278 445 5.74e-17 83.6
MS.gene073186.t1 MTR_5g040030 25.820 244 150 7 215 434 224 460 7.98e-17 83.2
MS.gene073186.t1 MTR_6g013920 30.726 179 108 6 253 428 283 448 9.38e-17 82.8
MS.gene073186.t1 MTR_6g014220 30.556 180 111 6 257 434 286 453 1.50e-16 82.0
MS.gene073186.t1 MTR_6g013990 26.316 247 154 9 201 434 222 453 1.61e-16 82.0
MS.gene073186.t1 MTR_5g072860 21.854 453 311 13 8 440 18 447 1.99e-16 81.6
MS.gene073186.t1 MTR_6g014200 30.435 184 114 6 253 434 281 452 2.08e-16 81.6
MS.gene073186.t1 MTR_6g011340 27.711 249 149 10 201 429 224 461 2.80e-16 81.3
MS.gene073186.t1 MTR_3g479490 26.776 183 125 4 259 441 283 456 3.07e-16 81.3
MS.gene073186.t1 MTR_3g031400 25.664 226 142 6 220 434 215 425 3.26e-16 81.3
MS.gene073186.t1 MTR_4g118000 24.138 464 290 17 6 434 10 446 3.65e-16 80.9
MS.gene073186.t1 MTR_4g082820 30.102 196 125 3 236 419 234 429 3.81e-16 80.9
MS.gene073186.t1 MTR_6g014190 31.319 182 108 6 253 432 91 257 4.19e-16 79.0
MS.gene073186.t1 MTR_8g059425 27.092 251 152 12 199 429 220 459 4.39e-16 80.9
MS.gene073186.t1 MTR_3g008010 30.939 181 109 7 257 434 286 453 4.40e-16 80.9
MS.gene073186.t1 MTR_5g090600 25.000 276 176 9 199 458 193 453 4.68e-16 80.5
MS.gene073186.t1 MTR_8g007585 30.556 180 111 6 257 434 200 367 1.00e-15 79.3
MS.gene073186.t1 MTR_1g107285 29.952 207 121 6 220 412 223 419 1.01e-15 79.7
MS.gene073186.t1 MTR_8g056740 25.676 222 151 5 220 431 121 338 1.08e-15 79.0
MS.gene073186.t1 MTR_5g039900 22.174 460 311 14 7 434 12 456 1.17e-15 79.3
MS.gene073186.t1 MTR_6g014020 29.787 188 111 6 253 429 284 461 1.62e-15 79.0
MS.gene073186.t1 MTR_5g058320 30.319 188 110 6 253 429 269 446 1.95e-15 78.6
MS.gene073186.t1 MTR_6g014250 28.125 192 124 6 257 446 286 465 2.23e-15 78.6
MS.gene073186.t1 MTR_5g070090 26.502 283 171 11 166 435 184 442 2.64e-15 78.2
MS.gene073186.t1 MTR_6g014310 26.908 249 150 10 201 434 225 456 2.74e-15 78.2
MS.gene073186.t1 MTR_5g004940 33.582 134 87 2 242 374 182 314 3.06e-15 77.8
MS.gene073186.t1 MTR_4g064987 24.835 455 277 21 18 446 18 433 3.19e-15 77.8
MS.gene073186.t1 MTR_7g070870 28.342 187 122 5 218 394 225 409 3.36e-15 77.8
MS.gene073186.t1 MTR_6g013450 28.415 183 120 5 253 429 285 462 5.21e-15 77.4
MS.gene073186.t1 MTR_6g014050 29.670 182 114 6 255 434 287 456 5.75e-15 77.4
MS.gene073186.t1 MTR_5g072840 22.545 448 293 15 8 434 10 424 8.86e-15 76.6
MS.gene073186.t1 MTR_6g014270 29.348 184 116 6 253 434 283 454 9.83e-15 76.6
MS.gene073186.t1 MTR_6g014240 28.804 184 117 6 253 434 251 422 1.03e-14 76.3
MS.gene073186.t1 MTR_5g072820 24.255 235 156 5 210 434 202 424 1.05e-14 76.3
MS.gene073186.t1 MTR_4g064987 24.512 461 277 21 18 446 18 439 1.87e-14 75.5
MS.gene073186.t1 MTR_5g072830 23.207 237 160 5 208 434 200 424 2.67e-14 75.1
MS.gene073186.t1 MTR_1g040310 22.195 401 231 14 64 416 75 442 3.75e-14 74.7
MS.gene073186.t1 MTR_6g014040 30.000 180 112 6 253 428 285 454 4.36e-14 74.7
MS.gene073186.t1 MTR_6g014150 29.348 184 116 6 253 434 281 452 4.91e-14 74.3
MS.gene073186.t1 MTR_7g039550 26.190 252 151 9 220 447 5 245 9.45e-14 71.6
MS.gene073186.t1 MTR_8g009840 27.523 218 136 4 261 458 314 529 9.49e-14 73.6
MS.gene073186.t1 MTR_6g013960 26.630 184 121 6 253 434 284 455 8.72e-13 70.5
MS.gene073186.t1 MTR_6g014290 28.261 184 111 6 257 429 286 459 1.53e-12 69.7
MS.gene073186.t1 MTR_7g080900 24.625 333 216 10 112 429 114 426 1.98e-12 69.3
MS.gene073186.t1 MTR_6g014300 27.848 158 100 6 279 434 296 441 3.61e-12 68.6
MS.gene073186.t1 MTR_5g031860 30.000 140 92 4 257 395 280 414 8.39e-12 67.4
MS.gene073186.t1 MTR_6g078320 25.641 195 135 2 236 420 252 446 1.25e-11 67.0
MS.gene073186.t1 MTR_0536s0030 32.836 134 77 4 309 432 194 324 2.15e-11 65.5
MS.gene073186.t1 MTR_0477s0010 28.421 190 115 6 253 431 121 300 4.43e-11 64.3
MS.gene073186.t1 MTR_5g031830 28.571 140 94 4 257 395 281 415 7.29e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene073186.t1 AT5G54010 44.615 455 241 5 5 458 3 447 2.07e-144 421
MS.gene073186.t1 AT5G53990 45.514 457 224 7 7 458 5 441 2.22e-144 420
MS.gene073186.t1 AT4G27570 44.396 455 235 7 8 458 7 447 7.39e-144 419
MS.gene073186.t1 AT5G54060 45.435 460 242 6 5 458 10 466 3.57e-142 415
MS.gene073186.t1 AT1G64920 45.077 457 230 7 7 458 5 445 7.04e-142 414
MS.gene073186.t1 AT4G27560 44.176 455 236 7 8 458 7 447 2.38e-141 413
MS.gene073186.t1 AT2G22930 45.033 453 232 5 7 458 5 441 9.25e-140 408
MS.gene073186.t1 AT4G09500 44.371 453 235 6 7 458 5 441 1.35e-137 403
MS.gene073186.t1 AT1G64910 43.326 457 234 6 7 458 5 441 1.46e-135 398
MS.gene073186.t1 AT3G29630 43.202 456 235 6 5 454 3 440 3.65e-134 394
MS.gene073186.t1 AT3G29630 42.163 453 218 7 5 454 3 414 5.50e-126 372
MS.gene073186.t1 AT4G09500 42.035 452 222 6 7 458 5 416 6.90e-125 369
MS.gene073186.t1 AT1G50580 40.839 453 248 5 5 454 3 438 2.28e-123 367
MS.gene073186.t1 AT2G22590 33.978 465 278 16 7 454 14 466 5.06e-71 233
MS.gene073186.t1 AT5G49690 30.702 456 291 12 7 452 9 449 6.05e-64 214
MS.gene073186.t1 AT5G65550 29.873 472 300 17 1 454 1 459 3.10e-59 201
MS.gene073186.t1 AT2G22930 39.171 217 118 2 7 223 5 207 2.06e-50 173
MS.gene073186.t1 AT2G22930 35.238 105 63 3 357 458 187 289 1.16e-12 68.9
MS.gene073186.t1 AT5G12890 28.846 468 284 19 4 437 6 458 8.20e-36 139
MS.gene073186.t1 AT5G03490 25.877 456 300 11 6 444 17 451 1.35e-34 135
MS.gene073186.t1 AT4G36770 27.564 468 270 20 7 435 3 440 5.08e-34 133
MS.gene073186.t1 AT2G36770 28.478 460 283 19 6 428 12 462 4.32e-32 128
MS.gene073186.t1 AT1G73880 26.128 421 268 14 2 397 8 410 6.04e-32 127
MS.gene073186.t1 AT2G36800 28.078 463 284 18 5 428 9 461 1.83e-31 126
MS.gene073186.t1 AT2G36750 29.957 464 268 20 6 429 8 454 2.12e-31 126
MS.gene073186.t1 AT2G36780 28.105 459 279 18 7 427 13 458 4.89e-31 125
MS.gene073186.t1 AT1G51210 26.818 440 281 14 8 433 20 432 1.97e-30 122
MS.gene073186.t1 AT1G05675 28.000 450 274 17 8 434 6 428 2.81e-29 119
MS.gene073186.t1 AT2G16890 27.332 461 299 18 8 445 9 456 3.30e-29 120
MS.gene073186.t1 AT4G34131 25.553 497 305 20 2 454 4 479 4.24e-28 116
MS.gene073186.t1 AT2G15490 25.166 453 300 14 7 427 6 451 6.83e-28 116
MS.gene073186.t1 AT2G15490 25.111 450 301 13 7 427 6 448 7.05e-28 116
MS.gene073186.t1 AT2G15480 25.268 467 298 15 7 434 9 463 1.52e-27 115
MS.gene073186.t1 AT3G50740 25.486 463 290 15 8 435 7 449 2.85e-27 114
MS.gene073186.t1 AT4G34135 25.223 448 281 14 7 416 10 441 3.49e-27 114
MS.gene073186.t1 AT4G34138 25.502 498 300 17 5 458 8 478 4.66e-27 114
MS.gene073186.t1 AT2G15480 25.503 447 287 14 7 419 9 443 8.44e-27 113
MS.gene073186.t1 AT2G31750 24.837 459 295 15 1 436 1 432 9.44e-27 112
MS.gene073186.t1 AT2G18570 26.096 456 301 17 1 434 1 442 1.13e-26 112
MS.gene073186.t1 AT2G31750 24.837 459 295 15 1 436 1 432 1.41e-26 112
MS.gene073186.t1 AT1G10400 25.474 475 309 18 7 452 6 464 1.58e-26 112
MS.gene073186.t1 AT2G36760 26.539 471 287 17 6 436 12 463 4.21e-26 111
MS.gene073186.t1 AT1G01420 26.596 470 259 18 8 428 11 443 1.99e-25 108
MS.gene073186.t1 AT1G01420 26.596 470 259 18 8 428 8 440 2.55e-25 108
MS.gene073186.t1 AT3G53150 26.609 466 296 19 7 435 21 477 2.63e-25 108
MS.gene073186.t1 AT3G53160 24.348 460 309 15 1 428 1 453 7.96e-25 107
MS.gene073186.t1 AT2G16890 26.353 425 282 16 8 412 9 422 9.51e-25 106
MS.gene073186.t1 AT1G05680 26.222 450 282 17 8 434 6 428 1.01e-24 106
MS.gene073186.t1 AT5G14860 25.103 486 321 18 1 454 1 475 2.24e-24 105
MS.gene073186.t1 AT2G30140 24.786 468 301 18 8 454 13 450 4.85e-24 104
MS.gene073186.t1 AT4G01070 34.272 213 122 6 236 434 235 443 8.08e-24 104
MS.gene073186.t1 AT3G46670 25.793 473 310 20 2 457 3 451 1.26e-23 103
MS.gene073186.t1 AT2G30140 24.788 472 297 19 8 454 13 451 2.24e-23 102
MS.gene073186.t1 AT2G18560 30.556 216 131 4 232 434 143 352 3.47e-23 101
MS.gene073186.t1 AT2G31790 24.481 482 300 18 8 458 8 456 3.49e-23 102
MS.gene073186.t1 AT2G30150 24.017 483 307 20 4 458 6 456 7.39e-23 101
MS.gene073186.t1 AT2G43820 24.153 472 287 17 8 449 7 437 9.46e-23 100
MS.gene073186.t1 AT2G43840 32.632 190 118 4 259 448 257 436 1.98e-22 99.8
MS.gene073186.t1 AT5G66690 24.615 455 297 17 8 435 7 442 2.03e-22 100
MS.gene073186.t1 AT2G43840 32.632 190 118 4 259 448 257 436 2.09e-22 99.8
MS.gene073186.t1 AT2G36970 30.263 228 147 6 215 437 229 449 2.77e-22 99.8
MS.gene073186.t1 AT1G07250 29.004 231 152 6 236 456 246 474 4.41e-22 99.0
MS.gene073186.t1 AT2G36790 27.079 469 286 20 2 428 7 461 4.64e-22 99.0
MS.gene073186.t1 AT2G29730 25.054 463 285 19 7 433 4 440 1.20e-21 97.8
MS.gene073186.t1 AT4G15550 22.678 463 312 14 2 436 7 451 1.85e-21 97.1
MS.gene073186.t1 AT4G15480 34.239 184 114 6 254 434 275 454 2.60e-21 96.7
MS.gene073186.t1 AT2G30150 23.779 471 302 19 13 458 2 440 4.43e-21 95.9
MS.gene073186.t1 AT3G21560 24.280 486 316 16 4 458 8 472 4.48e-21 96.3
MS.gene073186.t1 AT5G59590 24.464 466 307 20 8 454 10 449 6.75e-21 95.1
MS.gene073186.t1 AT3G11340 25.112 446 279 17 9 434 10 420 7.52e-21 95.1
MS.gene073186.t1 AT4G15280 29.787 235 144 5 241 456 243 475 9.11e-21 95.1
MS.gene073186.t1 AT4G15280 29.787 235 144 5 241 456 275 507 9.54e-21 95.1
MS.gene073186.t1 AT3G21760 29.907 214 132 5 257 454 269 480 1.49e-20 94.4
MS.gene073186.t1 AT4G15500 34.444 180 108 6 257 434 267 438 2.55e-20 93.6
MS.gene073186.t1 AT4G15490 23.427 461 307 14 1 434 1 442 3.27e-20 93.6
MS.gene073186.t1 AT3G21800 30.233 215 131 4 257 454 263 475 3.88e-20 93.2
MS.gene073186.t1 AT4G15260 28.814 236 146 6 241 456 123 356 4.86e-20 91.7
MS.gene073186.t1 AT5G26310 29.237 236 142 6 236 452 233 462 5.22e-20 92.8
MS.gene073186.t1 AT3G21750 27.801 241 152 5 236 456 232 470 8.31e-20 92.0
MS.gene073186.t1 AT5G59580 24.946 465 305 20 8 454 9 447 9.65e-20 91.7
MS.gene073186.t1 AT1G01390 34.343 198 109 6 248 428 248 441 1.23e-19 91.7
MS.gene073186.t1 AT1G07240 29.787 329 188 13 134 435 144 456 1.27e-19 91.7
MS.gene073186.t1 AT1G01390 34.343 198 109 6 248 428 265 458 1.28e-19 91.7
MS.gene073186.t1 AT3G21790 29.767 215 132 4 257 454 266 478 1.56e-19 91.7
MS.gene073186.t1 AT3G46660 25.439 456 302 19 2 445 8 437 1.75e-19 91.3
MS.gene073186.t1 AT5G05870 29.958 237 150 7 206 435 204 431 3.52e-19 90.1
MS.gene073186.t1 AT5G05860 24.609 447 289 16 7 435 8 424 6.21e-19 89.4
MS.gene073186.t1 AT3G21780 29.630 216 134 5 257 456 257 470 8.97e-19 89.0
MS.gene073186.t1 AT1G24100 30.208 192 125 4 257 448 266 448 1.00e-18 89.0
MS.gene073186.t1 AT5G05880 28.634 227 146 8 207 425 200 418 1.03e-18 88.6
MS.gene073186.t1 AT1G07260 28.821 229 151 6 236 454 245 471 1.20e-18 88.6
MS.gene073186.t1 AT3G16520 29.302 215 139 5 236 446 242 447 3.23e-18 87.0
MS.gene073186.t1 AT3G22250 32.967 182 102 8 257 427 274 446 5.28e-18 86.7
MS.gene073186.t1 AT3G16520 29.902 204 130 5 236 435 242 436 7.20e-18 86.3
MS.gene073186.t1 AT3G16520 29.902 204 130 5 236 435 242 436 7.56e-18 86.3
MS.gene073186.t1 AT1G06000 22.816 412 246 12 8 394 10 374 1.32e-17 85.1
MS.gene073186.t1 AT2G29710 31.694 183 112 5 257 433 265 440 1.54e-17 85.1
MS.gene073186.t1 AT5G05890 27.869 244 159 9 199 434 196 430 2.14e-17 84.7
MS.gene073186.t1 AT1G05560 29.148 223 137 7 241 448 275 491 2.37e-17 84.7
MS.gene073186.t1 AT2G29740 30.144 209 126 6 236 426 250 456 2.40e-17 84.7
MS.gene073186.t1 AT1G05560 28.700 223 138 7 241 448 225 441 2.51e-17 84.7
MS.gene073186.t1 AT1G05530 25.869 259 164 7 219 455 203 455 6.45e-17 83.2
MS.gene073186.t1 AT3G55710 35.000 140 86 4 259 396 263 399 8.47e-17 82.8
MS.gene073186.t1 AT3G55700 30.244 205 128 7 246 445 246 440 1.01e-16 82.8
MS.gene073186.t1 AT5G38010 25.647 464 281 20 8 445 10 435 4.38e-16 80.9
MS.gene073186.t1 AT3G46690 25.166 453 289 17 8 440 9 431 6.72e-16 80.1
MS.gene073186.t1 AT2G29750 30.729 192 117 6 249 426 267 456 6.94e-16 80.1
MS.gene073186.t1 AT1G22400 30.978 184 117 5 253 436 285 458 7.58e-16 80.1
MS.gene073186.t1 AT1G78270 29.348 184 121 5 253 436 283 457 8.29e-16 80.1
MS.gene073186.t1 AT3G02100 23.340 467 286 18 8 440 13 441 8.50e-16 79.7
MS.gene073186.t1 AT2G23250 28.000 200 136 5 257 454 242 435 1.00e-15 79.3
MS.gene073186.t1 AT4G14090 29.208 202 126 8 253 448 255 445 1.02e-15 79.7
MS.gene073186.t1 AT1G22360 30.435 184 118 5 253 436 281 454 1.21e-15 79.3
MS.gene073186.t1 AT2G28080 25.726 241 165 7 213 443 227 463 2.17e-15 78.6
MS.gene073186.t1 AT5G05900 24.145 468 295 21 1 436 1 440 4.74e-15 77.4
MS.gene073186.t1 AT2G23260 27.933 179 121 5 257 435 260 430 7.65e-15 77.0
MS.gene073186.t1 AT2G26480 26.613 248 156 9 208 445 196 427 2.19e-14 75.5
MS.gene073186.t1 AT5G17050 27.933 179 114 6 257 434 268 432 2.97e-14 75.1
MS.gene073186.t1 AT1G22380 29.891 184 119 5 253 436 284 457 5.70e-14 74.3
MS.gene073186.t1 AT1G22340 28.261 184 123 4 253 436 284 458 7.56e-14 73.9
MS.gene073186.t1 AT5G17030 25.641 234 152 9 210 436 215 433 1.57e-13 72.8
MS.gene073186.t1 AT1G22360 28.804 184 109 6 253 436 281 442 1.87e-12 69.3
MS.gene073186.t1 AT1G30530 26.667 195 127 7 258 450 263 443 3.85e-12 68.6
MS.gene073186.t1 AT5G17040 25.510 196 130 7 257 450 251 432 7.20e-12 67.4
MS.gene073186.t1 AT5G17040 25.510 196 130 7 257 450 149 330 9.82e-12 66.6

Find 90 sgRNAs with CRISPR-Local

Find 108 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAAAACCTGTTCTGCTTTC+AGG 0.078488 2.3:-14245011 MS.gene073186:CDS
TCCTCTAGTGTTGTATTTGT+TGG 0.233370 2.3:+14244972 None:intergenic
ATCACAGTTCCTCATGTTAA+TGG 0.256113 2.3:-14245521 MS.gene073186:CDS
TCAACTTTGGAAGCCAATAT+TGG 0.275061 2.3:+14245360 None:intergenic
AACTTCTTCTCAAGGAAATA+AGG 0.277035 2.3:-14245406 MS.gene073186:CDS
ATCCTTTCATTGAACCCTTC+TGG 0.282930 2.3:+14244765 None:intergenic
TTGCTTGGTCTTGAGTTAAC+AGG 0.300933 2.3:-14244849 MS.gene073186:CDS
AAAATGGATTTCATGGCTTA+AGG 0.310467 2.3:-14244949 MS.gene073186:CDS
CCAAGATAAGCTGTGGATAC+TGG 0.319952 2.3:+14245293 None:intergenic
AAAGGTTGCAATGAAATTGA+TGG 0.328357 2.3:-14245065 MS.gene073186:CDS
GGGTTCAATGAAAGGATAAA+AGG 0.342906 2.3:-14244759 MS.gene073186:CDS
GGGACAAAGGTAATAAGATT+TGG 0.347167 2.3:+14245545 None:intergenic
TAAAACTTGATGCAAGAATC+AGG 0.354611 2.3:+14245200 None:intergenic
GTTCAATATCCTTCTCTGTT+TGG 0.364016 2.3:+14245426 None:intergenic
TTGTTGGAGAGGTGAAGATA+TGG 0.378348 2.3:+14245647 None:intergenic
GCAGCACTTAAGCCACCTAT+TGG 0.380205 2.3:-14244813 MS.gene073186:CDS
TTAACATGAGGAACTGTGAT+AGG 0.385255 2.3:+14245524 None:intergenic
TCAATTGTTTCAAATCCAAT+AGG 0.386383 2.3:+14244798 None:intergenic
GGCTTAAGTGCTGCAAGAAA+TGG 0.387827 2.3:+14244822 None:intergenic
AAATGGATTTCATGGCTTAA+GGG 0.393977 2.3:-14244948 MS.gene073186:CDS
AGTGATGAGTTCAAAGTTCA+AGG 0.399604 2.3:-14244565 MS.gene073186:CDS
ACCTCTTAATGCTAACTTGT+TGG 0.399917 2.3:+14245631 None:intergenic
CCAGTATCCACAGCTTATCT+TGG 0.402654 2.3:-14245293 MS.gene073186:CDS
ATCCTTCTCTGTTTGGTCCA+TGG 0.404687 2.3:+14245433 None:intergenic
AGTGTTGTATTTGTTGGCTC+AGG 0.421458 2.3:+14244978 None:intergenic
AAGGGATTGTGTATGGAAGT+TGG 0.421780 2.3:-14244734 MS.gene073186:CDS
AATAAGAGGGACTAAAGAAA+AGG 0.434353 2.3:+14245463 None:intergenic
AATGAAAGGATAAAAGGAAA+AGG 0.439943 2.3:-14244753 MS.gene073186:CDS
ACAACCTCTGCAGATGCAAT+TGG 0.447132 2.3:-14245092 MS.gene073186:CDS
AATGTTTCCATGGTTTGCTA+TGG 0.456397 2.3:-14245681 MS.gene073186:CDS
TCCATGGCTGTAGCAATAAG+AGG 0.461979 2.3:+14245449 None:intergenic
ATGAAAGGATAAAAGGAAAA+GGG 0.462020 2.3:-14244752 MS.gene073186:CDS
CAATTTCAAGAGTTGTTGCT+TGG 0.466420 2.3:-14244864 MS.gene073186:CDS
AAAGGAAAAGGGATTGTGTA+TGG 0.468070 2.3:-14244741 MS.gene073186:CDS
ATTCTAGAACACCCTTCTGT+TGG 0.469353 2.3:-14244696 MS.gene073186:CDS
ACAGGACCTGAAAGCAGAAC+AGG 0.471617 2.3:+14245005 None:intergenic
GTTGAGAAAGGTGATGAAGA+TGG 0.473698 2.3:-14244531 MS.gene073186:CDS
TACCAGAAGGGTTCAATGAA+AGG 0.477556 2.3:-14244767 MS.gene073186:CDS
ATGGATGATGAGAATGAGGT+TGG 0.483258 2.3:-14244465 MS.gene073186:CDS
CTGGAGTCAATATAATGTAT+TGG 0.483981 2.3:+14245312 None:intergenic
TCCAACAAGTTAGCATTAAG+AGG 0.486768 2.3:-14245632 MS.gene073186:CDS
AAATCAAAGAAAACTATTTG+TGG 0.487198 2.3:+14245383 None:intergenic
AAAATTTCCTTGTTGAAGCT+AGG 0.487842 2.3:+14245159 None:intergenic
TTGAAGAAGCTTTACCAGAA+GGG 0.495315 2.3:-14244779 MS.gene073186:CDS
GCAGATGCAATTGGTTTCAA+AGG 0.495490 2.3:-14245083 MS.gene073186:CDS
ATGTTTCCATGGTTTGCTAT+GGG 0.504571 2.3:-14245680 MS.gene073186:CDS
GGAAACATTGCTATGTGTAA+AGG 0.506531 2.3:+14245695 None:intergenic
TACACATAGCAATGTTTCCA+TGG 0.507754 2.3:-14245691 MS.gene073186:CDS
TGTTGGAGAGGTGAAGATAT+GGG 0.518669 2.3:+14245648 None:intergenic
TTATTTGATCGTTTGCACAT+AGG 0.524916 2.3:-14245116 MS.gene073186:CDS
GGATATTGAACTTCTTCTCA+AGG 0.527735 2.3:-14245414 MS.gene073186:CDS
CCCTCTTATTGCTACAGCCA+TGG 0.534700 2.3:-14245450 MS.gene073186:CDS
ATAAGAGGGACTAAAGAAAA+GGG 0.535599 2.3:+14245464 None:intergenic
ATGAGTTCAAAGTTCAAGGT+TGG 0.538750 2.3:-14244561 MS.gene073186:CDS
ATGAGGTTGGAAAAGAAGCA+AGG 0.540029 2.3:-14244452 MS.gene073186:CDS
TTTGATGGATGATGAGAATG+AGG 0.540170 2.3:-14244469 MS.gene073186:CDS
TTGGTGTTGTTGCCGCGTGT+AGG 0.540630 2.3:-14244612 MS.gene073186:CDS
GATCTCATGAAACCGCCTGC+AGG 0.541019 2.3:-14245227 MS.gene073186:CDS
ATTGTTTCAAATCCAATAGG+TGG 0.549952 2.3:+14244801 None:intergenic
TAAAGGAGAAGGAGCATCCA+TGG 0.554316 2.3:+14245712 None:intergenic
CAAGAATCAGGAAAACCTGC+AGG 0.555559 2.3:+14245212 None:intergenic
ATTGAAGAAGCTTTACCAGA+AGG 0.555764 2.3:-14244780 MS.gene073186:CDS
TGAGGTTGGAAAAGAAGCAA+GGG 0.555786 2.3:-14244451 MS.gene073186:CDS
ATTGCTATGTGTAAAGGAGA+AGG 0.577456 2.3:+14245701 None:intergenic
TAACATGAGGAACTGTGATA+GGG 0.579312 2.3:+14245525 None:intergenic
ATGTTTCTGCATCATGTGGA+AGG 0.581236 2.3:+14245498 None:intergenic
GAAACCAATTGCATCTGCAG+AGG 0.585035 2.3:+14245088 None:intergenic
GTTATGAAACATCCAACAGA+AGG 0.588945 2.3:+14244684 None:intergenic
ACTTGTTAATACGTGTCAGT+TGG 0.597061 2.3:-14244631 MS.gene073186:CDS
TTAATGCTAACTTGTTGGAG+AGG 0.601672 2.3:+14245636 None:intergenic
GTTTCAATATAATCAGCATA+CGG 0.609203 2.3:+14245041 None:intergenic
TAAACATCCAAGATAAGCTG+TGG 0.613726 2.3:+14245286 None:intergenic
GAAGATGTTTCTGCATCATG+TGG 0.620712 2.3:+14245494 None:intergenic
AGGAACTGTGATAGGGACAA+AGG 0.624768 2.3:+14245532 None:intergenic
TTCGATTCCTAGCTTCAACA+AGG 0.628026 2.3:-14245166 MS.gene073186:CDS
GTTGGCGTAGAAGTTGAGAA+AGG 0.630312 2.3:-14244543 MS.gene073186:CDS
CCATGGCTGTAGCAATAAGA+GGG 0.636758 2.3:+14245450 None:intergenic
ACACGTATTAACAAGTCCCT+CGG 0.639689 2.3:+14244638 None:intergenic
AAGTGTCCCATAGCAAACCA+TGG 0.639716 2.3:+14245674 None:intergenic
GCCAACAAATACAACACTAG+AGG 0.646740 2.3:-14244973 MS.gene073186:CDS
AGCCATGGACCAAACAGAGA+AGG 0.647882 2.3:-14245435 MS.gene073186:CDS
TTTGTTGGCTCAGGTAACAC+AGG 0.651671 2.3:+14244987 None:intergenic
GTTGGAGAGGTGAAGATATG+GGG 0.667052 2.3:+14245649 None:intergenic
TGGAGCTGCTAGTATAACCG+AGG 0.676722 2.3:-14244655 MS.gene073186:CDS
TGTGGAAGGCCATTAACATG+AGG 0.687192 2.3:+14245512 None:intergenic
GAATCAGGAAAACCTGCAGG+CGG 0.688768 2.3:+14245215 None:intergenic
TTATGAAACATCCAACAGAA+GGG 0.698749 2.3:+14244685 None:intergenic
GGAGCTGCTAGTATAACCGA+GGG 0.722597 2.3:-14244654 MS.gene073186:CDS
GGATGTTTCATAACACACTG+TGG 0.766209 2.3:-14244675 MS.gene073186:CDS
ATATGATCAGAACCTACACG+CGG 0.781979 2.3:+14244600 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATCAAAGAAAACTATTTG+TGG + chr2.3:14244686-14244705 None:intergenic 20.0%
!!! CAATAAAAAGTTTCTCATTT+TGG + chr2.3:14245650-14245669 None:intergenic 20.0%
!!! GATTATATTGAAACAGTTTT+TGG - chr2.3:14245034-14245053 MS.gene073186:CDS 20.0%
!!! TCAACAAGGAAATTTTTATT+TGG - chr2.3:14244914-14244933 MS.gene073186:CDS 20.0%
!!! TGAAATTGATTTTGTTCTAA+TGG + chr2.3:14245190-14245209 None:intergenic 20.0%
!!! TTTTCTTTGATTTCCAATAT+TGG - chr2.3:14244693-14244712 MS.gene073186:CDS 20.0%
! AATGAAAGGATAAAAGGAAA+AGG - chr2.3:14245313-14245332 MS.gene073186:CDS 25.0%
! ATGAAAGGATAAAAGGAAAA+GGG - chr2.3:14245314-14245333 MS.gene073186:CDS 25.0%
! GTTTACAAAAACTAAGTCTA+GGG - chr2.3:14244798-14244817 MS.gene073186:CDS 25.0%
! GTTTCAATATAATCAGCATA+CGG + chr2.3:14245028-14245047 None:intergenic 25.0%
! TCAATTGTTTCAAATCCAAT+AGG + chr2.3:14245271-14245290 None:intergenic 25.0%
! TGTTTACAAAAACTAAGTCT+AGG - chr2.3:14244797-14244816 MS.gene073186:CDS 25.0%
!!! AACTTGTTGAGTGTATTTTT+AGG + chr2.3:14244482-14244501 None:intergenic 25.0%
!!! AGGAAATTTTTATTTGGAAG+TGG - chr2.3:14244920-14244939 MS.gene073186:CDS 25.0%
AAAATTTCCTTGTTGAAGCT+AGG + chr2.3:14244910-14244929 None:intergenic 30.0%
AAAGGTTGCAATGAAATTGA+TGG - chr2.3:14245001-14245020 MS.gene073186:CDS 30.0%
AACTTCTTCTCAAGGAAATA+AGG - chr2.3:14244660-14244679 MS.gene073186:CDS 30.0%
AATAAGAGGGACTAAAGAAA+AGG + chr2.3:14244606-14244625 None:intergenic 30.0%
ATAAGAGGGACTAAAGAAAA+GGG + chr2.3:14244605-14244624 None:intergenic 30.0%
ATACAACACTAGAGGAAAAA+TGG - chr2.3:14245101-14245120 MS.gene073186:CDS 30.0%
ATTGTTTCAAATCCAATAGG+TGG + chr2.3:14245268-14245287 None:intergenic 30.0%
CTGGAGTCAATATAATGTAT+TGG + chr2.3:14244757-14244776 None:intergenic 30.0%
TAAAACTTGATGCAAGAATC+AGG + chr2.3:14244869-14244888 None:intergenic 30.0%
TTATGAAACATCCAACAGAA+GGG + chr2.3:14245384-14245403 None:intergenic 30.0%
TTATTTGATCGTTTGCACAT+AGG - chr2.3:14244950-14244969 MS.gene073186:CDS 30.0%
! AAAATGGATTTCATGGCTTA+AGG - chr2.3:14245117-14245136 MS.gene073186:CDS 30.0%
! AAATGGATTTCATGGCTTAA+GGG - chr2.3:14245118-14245137 MS.gene073186:CDS 30.0%
! TAGAGGAAAAATGGATTTCA+TGG - chr2.3:14245110-14245129 MS.gene073186:CDS 30.0%
AAAGGAAAAGGGATTGTGTA+TGG - chr2.3:14245325-14245344 MS.gene073186:CDS 35.0%
AGTGATGAGTTCAAAGTTCA+AGG - chr2.3:14245501-14245520 MS.gene073186:CDS 35.0%
ATCACAGTTCCTCATGTTAA+TGG - chr2.3:14244545-14244564 MS.gene073186:CDS 35.0%
ATGAGTTCAAAGTTCAAGGT+TGG - chr2.3:14245505-14245524 MS.gene073186:CDS 35.0%
ATTGAAGAAGCTTTACCAGA+AGG - chr2.3:14245286-14245305 MS.gene073186:CDS 35.0%
ATTGCTATGTGTAAAGGAGA+AGG + chr2.3:14244368-14244387 None:intergenic 35.0%
CAATTTCAAGAGTTGTTGCT+TGG - chr2.3:14245202-14245221 MS.gene073186:CDS 35.0%
CCAAAGTTGACTAAAAACCT+TGG - chr2.3:14244719-14244738 MS.gene073186:CDS 35.0%
GGAAACATTGCTATGTGTAA+AGG + chr2.3:14244374-14244393 None:intergenic 35.0%
GGATATTGAACTTCTTCTCA+AGG - chr2.3:14244652-14244671 MS.gene073186:CDS 35.0%
GGGACAAAGGTAATAAGATT+TGG + chr2.3:14244524-14244543 None:intergenic 35.0%
GGGTTCAATGAAAGGATAAA+AGG - chr2.3:14245307-14245326 MS.gene073186:CDS 35.0%
GTTATGAAACATCCAACAGA+AGG + chr2.3:14245385-14245404 None:intergenic 35.0%
GTTCAATATCCTTCTCTGTT+TGG + chr2.3:14244643-14244662 None:intergenic 35.0%
TAAACATCCAAGATAAGCTG+TGG + chr2.3:14244783-14244802 None:intergenic 35.0%
TAACATGAGGAACTGTGATA+GGG + chr2.3:14244544-14244563 None:intergenic 35.0%
TACACATAGCAATGTTTCCA+TGG - chr2.3:14244375-14244394 MS.gene073186:CDS 35.0%
TCCAACAAGTTAGCATTAAG+AGG - chr2.3:14244434-14244453 MS.gene073186:CDS 35.0%
TCCTCTAGTGTTGTATTTGT+TGG + chr2.3:14245097-14245116 None:intergenic 35.0%
TGGCTTAAGGGATTCAAAAA+TGG - chr2.3:14245130-14245149 MS.gene073186:CDS 35.0%
TTAACATGAGGAACTGTGAT+AGG + chr2.3:14244545-14244564 None:intergenic 35.0%
TTGAAGAAGCTTTACCAGAA+GGG - chr2.3:14245287-14245306 MS.gene073186:CDS 35.0%
! ACCTCTTAATGCTAACTTGT+TGG + chr2.3:14244438-14244457 None:intergenic 35.0%
! ACTTGTTAATACGTGTCAGT+TGG - chr2.3:14245435-14245454 MS.gene073186:CDS 35.0%
! CAAAGCTGTGAAGATTTTGA+TGG - chr2.3:14245582-14245601 MS.gene073186:CDS 35.0%
! TCAACTTTGGAAGCCAATAT+TGG + chr2.3:14244709-14244728 None:intergenic 35.0%
! TTTGATGGATGATGAGAATG+AGG - chr2.3:14245597-14245616 MS.gene073186:CDS 35.0%
! TTTTGTGCATATGGAAGTGA+AGG - chr2.3:14245163-14245182 MS.gene073186:CDS 35.0%
!! AATGTTTCCATGGTTTGCTA+TGG - chr2.3:14244385-14244404 MS.gene073186:CDS 35.0%
!! ATGTTTCCATGGTTTGCTAT+GGG - chr2.3:14244386-14244405 MS.gene073186:CDS 35.0%
!! TTAATGCTAACTTGTTGGAG+AGG + chr2.3:14244433-14244452 None:intergenic 35.0%
!!! CCAAGGTTTTTAGTCAACTT+TGG + chr2.3:14244722-14244741 None:intergenic 35.0%
!!! TCTGTGGTTTTTTGTGCATA+TGG - chr2.3:14245154-14245173 MS.gene073186:CDS 35.0%
AAGGGATTGTGTATGGAAGT+TGG - chr2.3:14245332-14245351 MS.gene073186:CDS 40.0%
ACACGTATTAACAAGTCCCT+CGG + chr2.3:14245431-14245450 None:intergenic 40.0%
ATATGATCAGAACCTACACG+CGG + chr2.3:14245469-14245488 None:intergenic 40.0%
ATCCTTTCATTGAACCCTTC+TGG + chr2.3:14245304-14245323 None:intergenic 40.0%
ATGAGGTTGGAAAAGAAGCA+AGG - chr2.3:14245614-14245633 MS.gene073186:CDS 40.0%
ATGGATGATGAGAATGAGGT+TGG - chr2.3:14245601-14245620 MS.gene073186:CDS 40.0%
GCCAACAAATACAACACTAG+AGG - chr2.3:14245093-14245112 MS.gene073186:CDS 40.0%
GGATGTTTCATAACACACTG+TGG - chr2.3:14245391-14245410 MS.gene073186:CDS 40.0%
GTTGAGAAAGGTGATGAAGA+TGG - chr2.3:14245535-14245554 MS.gene073186:CDS 40.0%
TACCAGAAGGGTTCAATGAA+AGG - chr2.3:14245299-14245318 MS.gene073186:CDS 40.0%
TGAGGTTGGAAAAGAAGCAA+GGG - chr2.3:14245615-14245634 MS.gene073186:CDS 40.0%
TGTTGGAGAGGTGAAGATAT+GGG + chr2.3:14244421-14244440 None:intergenic 40.0%
TTCGATTCCTAGCTTCAACA+AGG - chr2.3:14244900-14244919 MS.gene073186:CDS 40.0%
TTGTTGGAGAGGTGAAGATA+TGG + chr2.3:14244422-14244441 None:intergenic 40.0%
! ATGTTTCTGCATCATGTGGA+AGG + chr2.3:14244571-14244590 None:intergenic 40.0%
! ATTGGAGACTTTTGATGCCA+AGG + chr2.3:14244739-14244758 None:intergenic 40.0%
! GAAGATGTTTCTGCATCATG+TGG + chr2.3:14244575-14244594 None:intergenic 40.0%
! GCAGATGCAATTGGTTTCAA+AGG - chr2.3:14244983-14245002 MS.gene073186:CDS 40.0%
! GGGATTCAAAAATGGTTCTG+TGG - chr2.3:14245138-14245157 MS.gene073186:CDS 40.0%
!! AGTGTTGTATTTGTTGGCTC+AGG + chr2.3:14245091-14245110 None:intergenic 40.0%
!! ATTCTAGAACACCCTTCTGT+TGG - chr2.3:14245370-14245389 MS.gene073186:CDS 40.0%
!! TTGCTTGGTCTTGAGTTAAC+AGG - chr2.3:14245217-14245236 MS.gene073186:CDS 40.0%
AAGTGTCCCATAGCAAACCA+TGG + chr2.3:14244395-14244414 None:intergenic 45.0%
ACAACCTCTGCAGATGCAAT+TGG - chr2.3:14244974-14244993 MS.gene073186:CDS 45.0%
AGGAACTGTGATAGGGACAA+AGG + chr2.3:14244537-14244556 None:intergenic 45.0%
ATCCTTCTCTGTTTGGTCCA+TGG + chr2.3:14244636-14244655 None:intergenic 45.0%
CAAGAATCAGGAAAACCTGC+AGG + chr2.3:14244857-14244876 None:intergenic 45.0%
CCAAGATAAGCTGTGGATAC+TGG + chr2.3:14244776-14244795 None:intergenic 45.0%
CCAGTATCCACAGCTTATCT+TGG - chr2.3:14244773-14244792 MS.gene073186:CDS 45.0%
CCATGGCTGTAGCAATAAGA+GGG + chr2.3:14244619-14244638 None:intergenic 45.0%
GAAACCAATTGCATCTGCAG+AGG + chr2.3:14244981-14245000 None:intergenic 45.0%
GGAAAACCTGTTCTGCTTTC+AGG - chr2.3:14245055-14245074 MS.gene073186:CDS 45.0%
GTTGGAGAGGTGAAGATATG+GGG + chr2.3:14244420-14244439 None:intergenic 45.0%
GTTGGCGTAGAAGTTGAGAA+AGG - chr2.3:14245523-14245542 MS.gene073186:CDS 45.0%
TCCATGGCTGTAGCAATAAG+AGG + chr2.3:14244620-14244639 None:intergenic 45.0%
TGTGGAAGGCCATTAACATG+AGG + chr2.3:14244557-14244576 None:intergenic 45.0%
! GGCTTAAGTGCTGCAAGAAA+TGG + chr2.3:14245247-14245266 None:intergenic 45.0%
!! TTTGTTGGCTCAGGTAACAC+AGG + chr2.3:14245082-14245101 None:intergenic 45.0%
ACAGGACCTGAAAGCAGAAC+AGG + chr2.3:14245064-14245083 None:intergenic 50.0%
AGCCATGGACCAAACAGAGA+AGG - chr2.3:14244631-14244650 MS.gene073186:CDS 50.0%
CCCTCTTATTGCTACAGCCA+TGG - chr2.3:14244616-14244635 MS.gene073186:CDS 50.0%
GAATCAGGAAAACCTGCAGG+CGG + chr2.3:14244854-14244873 None:intergenic 50.0%
GCAGCACTTAAGCCACCTAT+TGG - chr2.3:14245253-14245272 MS.gene073186:CDS 50.0%
GGAGCTGCTAGTATAACCGA+GGG - chr2.3:14245412-14245431 MS.gene073186:CDS 50.0%
TGGAGCTGCTAGTATAACCG+AGG - chr2.3:14245411-14245430 MS.gene073186:CDS 50.0%
GATCTCATGAAACCGCCTGC+AGG - chr2.3:14244839-14244858 MS.gene073186:CDS 55.0%
!! TTGGTGTTGTTGCCGCGTGT+AGG - chr2.3:14245454-14245473 MS.gene073186:CDS 55.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 14244356 14245732 14244356 ID=MS.gene073186
chr2.3 mRNA 14244356 14245732 14244356 ID=MS.gene073186.t1;Parent=MS.gene073186
chr2.3 exon 14244356 14245732 14244356 ID=MS.gene073186.t1.exon1;Parent=MS.gene073186.t1
chr2.3 CDS 14244356 14245732 14244356 ID=cds.MS.gene073186.t1;Parent=MS.gene073186.t1
Gene Sequence

>MS.gene073186

ATGGATGCTCCTTCTCCTTTACACATAGCAATGTTTCCATGGTTTGCTATGGGACACTTCACCCCATATCTTCACCTCTCCAACAAGTTAGCATTAAGAGGTCACAAAATATCATTCTTCATACCTAAAAATACACTCAACAAGTTACAACATCTCAATCTTCATCCAAATCTTATTACCTTTGTCCCTATCACAGTTCCTCATGTTAATGGCCTTCCACATGATGCAGAAACATCTTCTGATGTACCCTTTTCTTTAGTCCCTCTTATTGCTACAGCCATGGACCAAACAGAGAAGGATATTGAACTTCTTCTCAAGGAAATAAGGCCACAAATAGTTTTCTTTGATTTCCAATATTGGCTTCCAAAGTTGACTAAAAACCTTGGCATCAAAAGTCTCCAATACATTATATTGACTCCAGTATCCACAGCTTATCTTGGATGTTTACAAAAACTAAGTCTAGGGAAAGATTTAACTGAAGTTGATCTCATGAAACCGCCTGCAGGTTTTCCTGATTCTTGCATCAAGTTTTATAAACACGAACTTCGATTCCTAGCTTCAACAAGGAAATTTTTATTTGGAAGTGGTGTTTTTTTATTTGATCGTTTGCACATAGGTACAACCTCTGCAGATGCAATTGGTTTCAAAGGTTGCAATGAAATTGATGGACCGTATGCTGATTATATTGAAACAGTTTTTGGAAAACCTGTTCTGCTTTCAGGTCCTGTGTTACCTGAGCCAACAAATACAACACTAGAGGAAAAATGGATTTCATGGCTTAAGGGATTCAAAAATGGTTCTGTGGTTTTTTGTGCATATGGAAGTGAAGGTCCATTAGAACAAAATCAATTTCAAGAGTTGTTGCTTGGTCTTGAGTTAACAGGTTTTCCATTTCTTGCAGCACTTAAGCCACCTATTGGATTTGAAACAATTGAAGAAGCTTTACCAGAAGGGTTCAATGAAAGGATAAAAGGAAAAGGGATTGTGTATGGAAGTTGGATTCAACAACAGTTGATTCTAGAACACCCTTCTGTTGGATGTTTCATAACACACTGTGGAGCTGCTAGTATAACCGAGGGACTTGTTAATACGTGTCAGTTGGTGTTGTTGCCGCGTGTAGGTTCTGATCATATCATGAATGCAAGAGTGATGAGTTCAAAGTTCAAGGTTGGCGTAGAAGTTGAGAAAGGTGATGAAGATGGATTGTTTACAAGAGAAAGTGTGTGCAAAGCTGTGAAGATTTTGATGGATGATGAGAATGAGGTTGGAAAAGAAGCAAGGGAAAATCATGCCAAAATGAGAAACTTTTTATTGAGCAGCAATTTAGAATCTTCATGTGTTGATAGTTTCTGTCAAAAACTTTATGATTTGCTCTAG

Protein sequence

>MS.gene073186.t1

MDAPSPLHIAMFPWFAMGHFTPYLHLSNKLALRGHKISFFIPKNTLNKLQHLNLHPNLITFVPITVPHVNGLPHDAETSSDVPFSLVPLIATAMDQTEKDIELLLKEIRPQIVFFDFQYWLPKLTKNLGIKSLQYIILTPVSTAYLGCLQKLSLGKDLTEVDLMKPPAGFPDSCIKFYKHELRFLASTRKFLFGSGVFLFDRLHIGTTSADAIGFKGCNEIDGPYADYIETVFGKPVLLSGPVLPEPTNTTLEEKWISWLKGFKNGSVVFCAYGSEGPLEQNQFQELLLGLELTGFPFLAALKPPIGFETIEEALPEGFNERIKGKGIVYGSWIQQQLILEHPSVGCFITHCGAASITEGLVNTCQLVLLPRVGSDHIMNARVMSSKFKVGVEVEKGDEDGLFTRESVCKAVKILMDDENEVGKEARENHAKMRNFLLSSNLESSCVDSFCQKLYDLL