AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene073189


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene073189.t1 MTR_2g083420 87.555 458 33 1 1 458 1 434 0.0 826
MS.gene073189.t1 MTR_2g083390 86.245 458 39 1 1 458 1 434 0.0 817
MS.gene073189.t1 MTR_2g083480 86.681 458 61 0 1 458 1 458 0.0 806
MS.gene073189.t1 MTR_2g083430 78.603 458 98 0 1 458 1 458 0.0 729
MS.gene073189.t1 MTR_2g083380 67.249 458 150 0 1 458 18 475 0.0 626
MS.gene073189.t1 MTR_2g083490 66.376 458 154 0 1 458 1 458 0.0 622
MS.gene073189.t1 MTR_2g083360 68.433 453 38 4 6 458 27 374 0.0 592
MS.gene073189.t1 MTR_4g079250 62.391 460 169 3 1 458 1 458 0.0 588
MS.gene073189.t1 MTR_4g079270 60.652 460 177 3 1 458 1 458 0.0 574
MS.gene073189.t1 MTR_2g014900 59.424 451 182 1 8 458 7 456 0.0 550
MS.gene073189.t1 MTR_2g086283 50.336 447 110 7 11 457 1 335 9.41e-137 397
MS.gene073189.t1 MTR_1g090270 41.595 464 245 13 7 457 14 464 2.84e-114 344
MS.gene073189.t1 MTR_4g059370 40.854 328 173 8 141 457 74 391 1.28e-78 249
MS.gene073189.t1 MTR_8g068330 32.059 471 300 13 1 458 1 464 4.42e-68 224
MS.gene073189.t1 MTR_8g068360 31.992 472 296 13 2 458 6 467 2.18e-65 218
MS.gene073189.t1 MTR_7g067330 31.330 466 264 15 2 454 3 425 1.38e-63 212
MS.gene073189.t1 MTR_8g068340 30.917 469 298 11 2 454 6 464 2.99e-63 212
MS.gene073189.t1 MTR_2g014930 42.561 289 86 5 17 305 9 217 5.53e-63 204
MS.gene073189.t1 MTR_2g008226 33.262 469 283 16 6 454 8 466 9.80e-63 211
MS.gene073189.t1 MTR_2g008220 31.613 465 297 13 2 455 8 462 3.58e-62 209
MS.gene073189.t1 MTR_7g067120 31.169 462 264 15 2 451 3 422 8.57e-62 207
MS.gene073189.t1 MTR_4g123553 31.453 461 288 14 6 454 13 457 1.75e-61 207
MS.gene073189.t1 MTR_2g008225 31.330 466 297 13 2 455 9 463 2.26e-61 207
MS.gene073189.t1 MTR_6g036650 31.356 472 291 16 1 454 11 467 7.17e-59 201
MS.gene073189.t1 MTR_4g079280 43.421 228 84 3 11 238 1 183 5.44e-55 181
MS.gene073189.t1 MTR_6g042310 30.968 465 283 16 7 454 17 460 8.95e-55 189
MS.gene073189.t1 MTR_2g046620 30.652 460 293 14 6 454 14 458 2.25e-53 186
MS.gene073189.t1 MTR_2g083440 77.451 102 23 0 357 458 11 112 2.96e-52 172
MS.gene073189.t1 MTR_4g077960 29.425 452 287 16 17 454 1 434 1.66e-46 167
MS.gene073189.t1 MTR_1g090280 46.032 189 90 5 261 438 108 295 2.09e-46 163
MS.gene073189.t1 MTR_8g007650 30.317 442 276 13 7 428 6 435 8.50e-45 163
MS.gene073189.t1 MTR_8g007565 30.090 442 277 13 7 428 6 435 9.81e-45 162
MS.gene073189.t1 MTR_5g066410 28.767 438 263 11 11 427 1 410 5.14e-41 152
MS.gene073189.t1 MTR_8g066610 28.051 467 286 17 1 433 1 451 8.33e-36 138
MS.gene073189.t1 MTR_8g071070 27.651 481 307 16 5 457 4 471 4.35e-35 136
MS.gene073189.t1 MTR_8g009050 28.846 468 263 16 7 434 5 442 1.62e-32 129
MS.gene073189.t1 MTR_6g023665 28.571 448 274 14 9 427 14 444 2.58e-32 128
MS.gene073189.t1 MTR_8g009055 28.846 468 263 16 7 434 5 442 4.07e-32 128
MS.gene073189.t1 MTR_8g465670 28.017 464 249 17 9 424 8 434 4.26e-32 128
MS.gene073189.t1 MTR_5g087620 27.332 461 282 17 8 427 10 458 1.06e-31 127
MS.gene073189.t1 MTR_4g031800 27.273 462 283 17 6 434 7 448 1.49e-30 124
MS.gene073189.t1 MTR_4g485590 29.095 409 232 15 8 394 9 381 3.57e-30 121
MS.gene073189.t1 MTR_1g062380 26.509 464 290 19 5 428 13 465 1.12e-29 121
MS.gene073189.t1 MTR_6g488280 28.153 444 281 13 9 427 7 437 1.19e-29 120
MS.gene073189.t1 MTR_0428s0010 28.153 444 281 13 9 427 7 437 1.19e-29 120
MS.gene073189.t1 MTR_2g098430 24.894 470 288 16 9 437 7 452 1.91e-29 120
MS.gene073189.t1 MTR_8g006220 27.542 472 249 18 9 424 7 441 6.49e-29 119
MS.gene073189.t1 MTR_7g070660 25.275 455 294 15 7 428 10 451 6.72e-29 119
MS.gene073189.t1 MTR_7g013220 25.641 468 281 20 8 444 5 436 8.98e-29 118
MS.gene073189.t1 MTR_0009s0240 27.751 418 258 16 5 397 4 402 9.22e-29 118
MS.gene073189.t1 MTR_3g435310 37.824 193 113 5 258 450 227 412 1.64e-28 117
MS.gene073189.t1 MTR_3g435310 32.143 140 87 5 6 139 16 153 5.34e-15 77.0
MS.gene073189.t1 MTR_8g027885 28.194 454 256 17 6 421 16 437 2.54e-28 117
MS.gene073189.t1 MTR_5g045970 26.923 468 287 18 5 432 13 465 3.36e-28 117
MS.gene073189.t1 MTR_8g027870 29.333 450 256 16 6 421 16 437 8.39e-28 115
MS.gene073189.t1 MTR_6g038220 25.877 456 284 17 8 440 11 435 9.85e-28 115
MS.gene073189.t1 MTR_8g006270 29.348 276 165 7 167 428 178 437 2.01e-27 114
MS.gene073189.t1 MTR_0184s0030 35.922 206 113 6 237 425 234 437 3.45e-27 114
MS.gene073189.t1 MTR_6g033615 27.511 458 264 19 9 434 5 426 3.53e-27 114
MS.gene073189.t1 MTR_3g009510 34.101 217 124 5 236 436 241 454 5.13e-27 113
MS.gene073189.t1 MTR_8g008990 27.601 471 267 18 7 434 5 444 5.84e-27 113
MS.gene073189.t1 MTR_7g070610 24.411 467 296 14 7 433 12 461 6.14e-27 113
MS.gene073189.t1 MTR_0184s0040 25.720 486 297 17 7 457 20 476 8.68e-27 112
MS.gene073189.t1 MTR_0078s0190 25.720 486 297 17 7 457 20 476 8.68e-27 112
MS.gene073189.t1 MTR_6g033625 26.407 462 278 17 9 434 5 440 8.91e-27 112
MS.gene073189.t1 MTR_8g006730 25.508 443 298 13 8 427 6 439 1.12e-26 112
MS.gene073189.t1 MTR_8g009063 26.752 471 270 17 7 436 12 448 1.97e-26 112
MS.gene073189.t1 MTR_7g117170 37.368 190 103 5 257 434 266 451 2.06e-26 111
MS.gene073189.t1 MTR_7g013180 26.531 441 263 17 8 419 5 413 2.45e-26 111
MS.gene073189.t1 MTR_6g038200 25.821 457 276 18 8 436 11 432 3.46e-26 110
MS.gene073189.t1 MTR_8g006710 26.316 456 275 17 9 427 7 438 3.67e-26 110
MS.gene073189.t1 MTR_0078s0060 25.268 467 283 15 7 436 5 442 3.99e-26 110
MS.gene073189.t1 MTR_4g485620 26.244 442 284 14 20 433 1 428 5.08e-26 110
MS.gene073189.t1 MTR_7g070740 24.784 464 297 15 7 433 10 458 5.43e-26 110
MS.gene073189.t1 MTR_7g070810 26.077 441 291 13 7 421 8 439 9.05e-26 110
MS.gene073189.t1 MTR_8g012635 30.961 281 157 9 166 427 182 444 1.00e-25 109
MS.gene073189.t1 MTR_7g055710 24.893 466 294 15 7 433 10 458 1.76e-25 109
MS.gene073189.t1 MTR_7g013200 26.233 446 286 18 8 437 5 423 3.18e-25 107
MS.gene073189.t1 MTR_7g046490 36.458 192 108 4 253 432 250 439 4.83e-25 107
MS.gene073189.t1 MTR_2g046820 34.615 208 124 4 257 454 257 462 6.08e-25 107
MS.gene073189.t1 MTR_1g019520 37.356 174 96 3 257 419 4 175 7.04e-25 102
MS.gene073189.t1 MTR_6g038230 25.164 457 287 17 8 440 11 436 1.27e-24 106
MS.gene073189.t1 MTR_6g005600 35.751 193 107 4 255 434 255 443 1.35e-24 106
MS.gene073189.t1 MTR_8g009073 26.964 471 266 20 7 434 5 440 1.54e-24 106
MS.gene073189.t1 MTR_4g117980 25.107 466 270 18 6 421 9 445 2.24e-24 105
MS.gene073189.t1 MTR_5g035580 25.420 476 249 16 7 434 12 429 3.27e-24 105
MS.gene073189.t1 MTR_4g485630 25.806 465 286 17 7 433 8 451 3.70e-24 105
MS.gene073189.t1 MTR_6g033725 31.646 237 140 7 216 434 205 437 3.77e-24 105
MS.gene073189.t1 MTR_5g035560 25.208 480 293 19 7 456 10 453 4.55e-24 105
MS.gene073189.t1 MTR_8g012650 32.110 218 127 5 235 435 235 448 6.47e-24 104
MS.gene073189.t1 MTR_0078s0010 35.676 185 107 4 253 427 254 436 6.65e-24 104
MS.gene073189.t1 MTR_5g098930 24.187 492 293 16 7 450 4 463 8.99e-24 103
MS.gene073189.t1 MTR_7g013240 26.247 461 267 22 8 440 6 421 1.12e-23 103
MS.gene073189.t1 MTR_8g012730 32.870 216 126 5 228 427 69 281 1.76e-23 100
MS.gene073189.t1 MTR_8g009073 33.488 215 125 6 234 434 101 311 2.36e-23 100
MS.gene073189.t1 MTR_8g466240 25.688 436 249 18 1 398 1 399 2.65e-23 102
MS.gene073189.t1 MTR_7g117405 27.021 470 273 21 8 433 12 455 2.96e-23 102
MS.gene073189.t1 MTR_2g046750 34.615 208 124 4 257 454 260 465 3.33e-23 102
MS.gene073189.t1 MTR_4g024020 25.934 455 286 17 7 421 8 451 3.89e-23 102
MS.gene073189.t1 MTR_8g006260 28.889 270 162 10 184 435 198 455 4.48e-23 102
MS.gene073189.t1 MTR_8g009067 34.574 188 109 4 257 434 139 322 4.59e-23 100
MS.gene073189.t1 MTR_8g074550 24.583 480 300 19 1 434 1 464 4.62e-23 102
MS.gene073189.t1 MTR_4g117950 25.333 450 275 16 6 421 4 426 5.11e-23 101
MS.gene073189.t1 MTR_7g102560 25.316 474 285 17 1 427 1 452 5.56e-23 101
MS.gene073189.t1 MTR_1g019510 36.207 174 98 3 257 419 255 426 6.40e-23 101
MS.gene073189.t1 MTR_2g040530 33.173 208 127 4 257 454 259 464 6.47e-23 101
MS.gene073189.t1 MTR_6g038240 32.418 182 112 6 254 435 261 431 7.81e-23 101
MS.gene073189.t1 MTR_8g009067 34.574 188 109 4 257 434 257 440 8.09e-23 101
MS.gene073189.t1 MTR_7g102460 26.049 453 285 17 7 421 8 448 8.30e-23 101
MS.gene073189.t1 MTR_7g070910 23.142 471 301 16 5 433 8 459 1.15e-22 100
MS.gene073189.t1 MTR_7g102550 25.431 464 293 18 8 432 9 458 2.00e-22 100
MS.gene073189.t1 MTR_4g128720 25.855 468 286 18 7 444 14 450 2.20e-22 99.8
MS.gene073189.t1 MTR_5g045960 25.678 479 296 19 7 443 8 468 2.31e-22 100
MS.gene073189.t1 MTR_8g044140 24.500 400 226 12 64 416 37 407 2.85e-22 99.4
MS.gene073189.t1 MTR_4g082820 26.047 430 277 13 7 406 6 424 3.75e-22 99.0
MS.gene073189.t1 MTR_8g012630 33.690 187 106 4 257 427 204 388 4.11e-22 98.6
MS.gene073189.t1 MTR_7g071040 22.777 461 315 12 5 433 14 465 4.39e-22 99.4
MS.gene073189.t1 MTR_7g047030 23.958 480 312 15 8 457 6 462 5.33e-22 98.6
MS.gene073189.t1 MTR_7g047270 23.958 480 312 15 8 457 6 462 5.33e-22 98.6
MS.gene073189.t1 MTR_1g107350 24.411 467 297 19 1 434 1 444 8.12e-22 98.2
MS.gene073189.t1 MTR_0536s0010 25.652 460 260 20 6 421 19 440 1.02e-21 97.8
MS.gene073189.t1 MTR_7g070780 23.707 464 306 13 5 433 8 458 1.12e-21 97.8
MS.gene073189.t1 MTR_3g079480 25.107 466 274 21 8 427 21 457 1.32e-21 97.8
MS.gene073189.t1 MTR_5g019580 29.630 270 159 7 183 433 222 479 1.47e-21 97.8
MS.gene073189.t1 MTR_5g019580 29.630 270 159 7 183 433 198 455 1.48e-21 97.4
MS.gene073189.t1 MTR_7g070800 22.462 463 310 12 5 433 3 450 1.49e-21 97.4
MS.gene073189.t1 MTR_3g069690 28.571 238 152 6 207 434 196 425 1.59e-21 97.1
MS.gene073189.t1 MTR_7g013260 25.828 453 280 20 8 440 6 422 1.76e-21 97.1
MS.gene073189.t1 MTR_8g077590 28.986 276 170 5 166 432 184 442 2.26e-21 96.7
MS.gene073189.t1 MTR_5g090610 28.016 257 159 6 206 438 190 444 2.62e-21 96.7
MS.gene073189.t1 MTR_7g102490 25.658 456 285 18 7 421 8 450 3.17e-21 96.7
MS.gene073189.t1 MTR_2g034990 23.297 455 302 15 1 421 4 445 4.93e-21 95.9
MS.gene073189.t1 MTR_6g033675 29.508 244 156 7 203 434 201 440 7.32e-21 95.5
MS.gene073189.t1 MTR_6g033660 33.163 196 124 5 241 434 249 439 9.33e-21 95.1
MS.gene073189.t1 MTR_8g012745 29.391 279 161 11 166 427 182 441 1.05e-20 94.7
MS.gene073189.t1 MTR_8g083280 30.172 232 128 8 241 449 249 469 1.15e-20 94.7
MS.gene073189.t1 MTR_7g070930 22.965 479 306 16 1 433 1 462 1.41e-20 94.7
MS.gene073189.t1 MTR_7g102520 25.850 441 277 15 7 413 11 435 1.57e-20 94.4
MS.gene073189.t1 MTR_3g009490 34.731 167 93 4 283 436 3 166 1.79e-20 89.4
MS.gene073189.t1 MTR_8g008970 33.511 188 111 4 257 434 257 440 3.07e-20 94.4
MS.gene073189.t1 MTR_8g008970 27.113 284 173 8 157 436 510 763 2.80e-17 85.1
MS.gene073189.t1 MTR_8g088560 33.155 187 117 6 252 438 259 437 3.13e-20 93.2
MS.gene073189.t1 MTR_7g102450 25.277 451 285 17 8 427 11 440 3.26e-20 93.6
MS.gene073189.t1 MTR_4g128690 33.491 212 127 6 210 419 216 415 3.34e-20 93.2
MS.gene073189.t1 MTR_7g070940 24.444 450 307 14 7 433 8 447 3.46e-20 93.2
MS.gene073189.t1 MTR_4g485640 24.485 437 289 15 18 428 219 640 3.63e-20 94.0
MS.gene073189.t1 MTR_5g090700 28.077 260 155 8 206 438 206 460 3.81e-20 93.2
MS.gene073189.t1 MTR_8g083290 33.520 179 112 5 257 434 267 439 4.01e-20 93.2
MS.gene073189.t1 MTR_7g080940 21.875 448 309 12 5 436 8 430 4.61e-20 92.8
MS.gene073189.t1 MTR_4g082810 26.265 415 270 11 7 397 6 408 4.83e-20 92.4
MS.gene073189.t1 MTR_5g098960 33.663 202 115 8 257 454 260 446 5.19e-20 92.4
MS.gene073189.t1 MTR_2g059240 23.747 459 301 12 2 431 8 446 6.39e-20 92.4
MS.gene073189.t1 MTR_3g049970 24.138 464 298 17 3 434 4 445 6.47e-20 92.4
MS.gene073189.t1 MTR_7g071050 23.340 467 292 15 7 455 12 430 1.11e-19 91.3
MS.gene073189.t1 MTR_1g107315 25.346 434 292 15 1 412 1 424 1.36e-19 91.7
MS.gene073189.t1 MTR_4g117960 24.130 460 289 17 1 421 6 444 2.21e-19 90.9
MS.gene073189.t1 MTR_5g067170 32.804 189 110 5 253 425 262 449 2.46e-19 90.9
MS.gene073189.t1 MTR_2g035020 24.289 457 295 18 1 421 4 445 3.04e-19 90.5
MS.gene073189.t1 MTR_6g038300 30.601 183 117 5 254 436 261 433 3.32e-19 90.1
MS.gene073189.t1 MTR_3g084540 28.796 191 124 4 253 436 266 451 4.06e-19 90.1
MS.gene073189.t1 MTR_7g080950 31.915 188 116 7 253 440 253 428 4.08e-19 89.7
MS.gene073189.t1 MTR_5g090660 28.761 226 138 7 234 438 233 456 4.18e-19 90.5
MS.gene073189.t1 MTR_7g080935 23.282 451 295 15 7 436 10 430 4.36e-19 89.7
MS.gene073189.t1 MTR_3g479520 24.008 479 284 21 1 427 1 451 4.42e-19 90.1
MS.gene073189.t1 MTR_4g094920 29.327 208 138 6 253 454 275 479 4.88e-19 90.1
MS.gene073189.t1 MTR_3g084530 29.843 191 121 5 253 436 266 450 6.44e-19 89.4
MS.gene073189.t1 MTR_6g013900 25.658 456 285 18 8 427 10 447 6.63e-19 89.4
MS.gene073189.t1 MTR_5g090620 27.049 244 147 6 224 438 218 459 7.47e-19 89.4
MS.gene073189.t1 MTR_5g039900 23.529 459 297 16 7 428 12 453 8.36e-19 89.4
MS.gene073189.t1 MTR_3g069710 30.000 260 165 10 208 457 202 454 9.77e-19 89.0
MS.gene073189.t1 MTR_4g108250 22.414 464 310 12 7 432 10 461 1.06e-18 89.0
MS.gene073189.t1 MTR_4g095008 31.361 169 109 5 253 417 260 425 1.10e-18 89.0
MS.gene073189.t1 MTR_3g084520 27.397 219 130 6 241 436 238 450 1.17e-18 88.6
MS.gene073189.t1 MTR_6g011340 23.721 430 282 15 8 401 10 429 1.30e-18 88.6
MS.gene073189.t1 MTR_0536s0020 25.562 489 290 23 7 448 17 478 1.39e-18 88.6
MS.gene073189.t1 MTR_5g090670 28.054 221 134 6 241 438 242 460 2.65e-18 87.4
MS.gene073189.t1 MTR_5g027210 24.723 271 167 6 212 450 212 477 3.16e-18 87.4
MS.gene073189.t1 MTR_1g107360 30.882 204 129 5 232 434 245 437 3.68e-18 87.0
MS.gene073189.t1 MTR_5g090630 28.767 219 133 6 241 438 233 449 4.69e-18 86.7
MS.gene073189.t1 MTR_1g029540 21.700 447 301 13 13 437 19 438 5.38e-18 86.7
MS.gene073189.t1 MTR_4g117890 24.946 465 281 22 7 432 12 447 5.92e-18 86.7
MS.gene073189.t1 MTR_6g035185 22.601 469 300 16 1 427 4 451 7.26e-18 86.3
MS.gene073189.t1 MTR_6g013960 23.278 421 283 12 8 395 10 423 7.55e-18 86.3
MS.gene073189.t1 MTR_8g090095 23.684 456 292 14 13 438 30 459 8.71e-18 85.9
MS.gene073189.t1 MTR_2g035040 30.412 194 116 5 257 436 173 361 1.01e-17 85.1
MS.gene073189.t1 MTR_1g032490 24.661 442 283 17 2 412 4 426 1.05e-17 85.9
MS.gene073189.t1 MTR_8g064880 24.289 457 266 18 5 412 6 431 1.05e-17 85.9
MS.gene073189.t1 MTR_5g090580 25.769 260 161 7 206 438 204 458 1.06e-17 85.9
MS.gene073189.t1 MTR_6g035265 22.669 472 305 18 1 434 4 453 1.08e-17 85.9
MS.gene073189.t1 MTR_5g029800 31.868 182 109 4 250 417 257 437 1.37e-17 85.5
MS.gene073189.t1 MTR_8g032950 23.144 458 298 17 6 427 10 449 2.06e-17 84.7
MS.gene073189.t1 MTR_7g012120 30.928 194 118 5 250 428 263 455 2.11e-17 84.7
MS.gene073189.t1 MTR_6g014170 29.592 196 124 6 253 446 266 449 2.23e-17 84.7
MS.gene073189.t1 MTR_4g008630 25.591 254 171 7 199 437 191 441 3.10e-17 84.3
MS.gene073189.t1 MTR_0288s0020 24.279 416 266 15 8 395 10 404 3.63e-17 84.0
MS.gene073189.t1 MTR_7g070870 23.587 407 283 12 4 394 15 409 3.84e-17 84.0
MS.gene073189.t1 MTR_5g070040 30.435 253 147 12 188 427 206 442 4.32e-17 84.0
MS.gene073189.t1 MTR_6g014220 22.594 478 309 17 8 446 10 465 4.61e-17 84.0
MS.gene073189.t1 MTR_0891s0010 26.852 216 140 6 221 427 52 258 4.72e-17 82.0
MS.gene073189.t1 MTR_3g479490 23.982 442 252 19 7 394 5 416 5.35e-17 83.6
MS.gene073189.t1 MTR_7g011470 22.796 465 312 11 8 446 10 453 5.46e-17 83.6
MS.gene073189.t1 MTR_7g470610 26.861 309 179 11 120 409 5 285 6.51e-17 81.3
MS.gene073189.t1 MTR_7g070583 26.861 309 179 11 120 409 5 285 6.51e-17 81.3
MS.gene073189.t1 MTR_5g040030 25.490 255 162 7 198 428 207 457 6.85e-17 83.2
MS.gene073189.t1 MTR_3g479610 28.655 171 113 4 257 427 120 281 7.57e-17 81.6
MS.gene073189.t1 MTR_8g064870 31.915 188 118 6 253 434 266 449 1.09e-16 82.8
MS.gene073189.t1 MTR_6g013920 24.342 456 291 17 8 427 10 447 1.23e-16 82.4
MS.gene073189.t1 MTR_7g070860 21.304 460 301 12 7 433 6 437 1.32e-16 82.4
MS.gene073189.t1 MTR_3g031450 26.457 223 134 6 220 427 213 420 1.75e-16 82.0
MS.gene073189.t1 MTR_6g014270 22.176 478 291 18 8 434 7 454 1.96e-16 82.0
MS.gene073189.t1 MTR_5g072820 24.330 448 285 18 8 434 10 424 2.00e-16 81.6
MS.gene073189.t1 MTR_1g107365 31.214 173 108 4 240 412 286 447 2.36e-16 81.6
MS.gene073189.t1 MTR_7g011470 29.082 196 125 6 253 446 266 449 2.96e-16 81.3
MS.gene073189.t1 MTR_1g107380 28.169 213 133 7 220 419 230 435 3.14e-16 81.3
MS.gene073189.t1 MTR_1g107375 30.256 195 124 5 240 434 247 429 3.35e-16 80.9
MS.gene073189.t1 MTR_2g008210 31.250 176 112 6 253 427 278 445 4.19e-16 80.9
MS.gene073189.t1 MTR_5g072860 22.247 454 306 17 8 439 18 446 4.55e-16 80.5
MS.gene073189.t1 MTR_1g040310 21.861 462 276 17 7 416 14 442 4.73e-16 80.9
MS.gene073189.t1 MTR_3g008010 29.016 193 121 7 257 446 286 465 9.95e-16 79.7
MS.gene073189.t1 MTR_5g016480 28.090 178 122 5 251 427 267 439 1.12e-15 79.3
MS.gene073189.t1 MTR_6g014020 29.348 184 116 6 253 434 284 455 1.14e-15 79.3
MS.gene073189.t1 MTR_6g013450 23.173 479 292 19 4 429 7 462 1.37e-15 79.3
MS.gene073189.t1 MTR_8g056740 25.322 233 158 5 210 431 111 338 1.50e-15 78.6
MS.gene073189.t1 MTR_6g014200 28.163 245 147 10 206 434 221 452 1.85e-15 79.0
MS.gene073189.t1 MTR_5g090600 24.803 254 159 7 216 445 199 444 2.10e-15 78.6
MS.gene073189.t1 MTR_5g058320 24.017 458 271 19 4 420 7 428 2.12e-15 78.6
MS.gene073189.t1 MTR_6g013990 26.923 182 123 5 253 434 282 453 2.15e-15 78.6
MS.gene073189.t1 MTR_3g031400 25.664 226 142 6 220 434 215 425 2.43e-15 78.6
MS.gene073189.t1 MTR_6g014190 31.361 169 104 5 253 419 91 249 2.75e-15 76.6
MS.gene073189.t1 MTR_8g007585 28.646 192 123 6 257 446 200 379 3.29e-15 77.4
MS.gene073189.t1 MTR_6g014310 25.574 305 192 12 147 434 170 456 3.88e-15 77.8
MS.gene073189.t1 MTR_6g014250 28.889 180 114 6 257 434 286 453 4.73e-15 77.4
MS.gene073189.t1 MTR_8g059425 26.971 241 146 11 210 434 227 453 4.75e-15 77.4
MS.gene073189.t1 MTR_5g072810 22.395 451 293 18 8 434 12 429 5.32e-15 77.4
MS.gene073189.t1 MTR_1g107285 31.928 166 102 4 249 412 263 419 5.89e-15 77.4
MS.gene073189.t1 MTR_5g072840 22.247 445 298 15 8 434 10 424 1.57e-14 75.9
MS.gene073189.t1 MTR_5g072830 22.545 448 293 16 8 434 10 424 1.59e-14 75.9
MS.gene073189.t1 MTR_5g004940 32.836 134 88 2 242 374 182 314 1.66e-14 75.5
MS.gene073189.t1 MTR_6g014050 28.571 182 116 6 255 434 287 456 2.70e-14 75.1
MS.gene073189.t1 MTR_6g014240 27.717 184 119 6 253 434 251 422 6.37e-14 73.9
MS.gene073189.t1 MTR_6g014187 23.404 470 293 21 8 434 10 455 1.23e-13 73.2
MS.gene073189.t1 MTR_4g118000 22.819 447 280 17 6 417 10 426 1.34e-13 73.2
MS.gene073189.t1 MTR_6g014040 28.261 184 118 6 253 434 285 456 1.80e-13 72.8
MS.gene073189.t1 MTR_6g014150 30.345 145 94 4 253 395 281 420 1.87e-13 72.8
MS.gene073189.t1 MTR_8g009840 30.000 210 125 5 224 419 289 490 3.78e-13 71.6
MS.gene073189.t1 MTR_6g014290 30.496 141 91 4 257 395 286 421 1.30e-12 70.1
MS.gene073189.t1 MTR_7g080900 28.902 173 113 5 257 429 264 426 1.86e-12 69.3
MS.gene073189.t1 MTR_7g039550 25.397 252 153 9 220 447 5 245 2.47e-12 67.4
MS.gene073189.t1 MTR_4g064987 28.085 235 143 10 212 432 199 421 4.21e-12 68.2
MS.gene073189.t1 MTR_4g064987 28.085 235 143 10 212 432 205 427 4.40e-12 68.2
MS.gene073189.t1 MTR_6g078320 26.667 195 133 2 236 420 252 446 1.07e-11 67.0
MS.gene073189.t1 MTR_5g031830 27.586 145 99 4 252 395 276 415 6.61e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene073189.t1 AT5G54010 45.055 455 239 6 5 458 3 447 7.72e-144 419
MS.gene073189.t1 AT4G27570 44.615 455 234 7 8 458 7 447 3.82e-143 417
MS.gene073189.t1 AT5G53990 45.475 453 230 6 7 458 5 441 2.73e-142 415
MS.gene073189.t1 AT2G22930 45.916 453 228 6 7 458 5 441 4.50e-141 412
MS.gene073189.t1 AT4G27560 44.615 455 234 7 8 458 7 447 7.72e-141 411
MS.gene073189.t1 AT4G09500 44.989 449 230 6 7 454 5 437 7.21e-140 409
MS.gene073189.t1 AT5G54060 44.902 461 243 7 5 458 10 466 3.60e-139 408
MS.gene073189.t1 AT1G64920 44.201 457 234 6 7 458 5 445 6.82e-138 404
MS.gene073189.t1 AT3G29630 44.737 456 228 7 5 454 3 440 2.89e-137 402
MS.gene073189.t1 AT1G64910 43.929 453 237 6 7 458 5 441 3.97e-136 399
MS.gene073189.t1 AT3G29630 44.150 453 209 7 5 454 3 414 1.01e-130 384
MS.gene073189.t1 AT4G09500 43.304 448 214 7 7 454 5 412 1.48e-127 376
MS.gene073189.t1 AT1G50580 42.198 455 239 7 5 454 3 438 1.84e-123 367
MS.gene073189.t1 AT2G22590 34.632 462 279 16 7 454 14 466 3.55e-69 228
MS.gene073189.t1 AT5G65550 31.733 479 282 18 1 454 1 459 1.24e-65 218
MS.gene073189.t1 AT5G49690 31.938 454 288 11 7 452 9 449 2.34e-65 217
MS.gene073189.t1 AT2G22930 40.553 217 115 3 7 223 5 207 5.94e-51 174
MS.gene073189.t1 AT2G22930 37.143 105 61 3 357 458 187 289 1.02e-13 72.0
MS.gene073189.t1 AT5G12890 27.743 483 270 19 4 437 6 458 9.05e-34 133
MS.gene073189.t1 AT5G03490 25.918 463 267 15 6 434 17 437 3.72e-33 130
MS.gene073189.t1 AT4G36770 28.603 458 278 18 7 435 3 440 2.31e-32 128
MS.gene073189.t1 AT1G51210 27.107 439 281 14 8 433 20 432 5.14e-32 127
MS.gene073189.t1 AT1G73880 26.573 429 260 14 2 399 8 412 6.34e-32 127
MS.gene073189.t1 AT2G16890 28.017 464 292 20 8 445 9 456 3.88e-31 125
MS.gene073189.t1 AT4G34131 26.609 466 286 16 2 428 4 452 8.00e-31 124
MS.gene073189.t1 AT1G05675 28.125 448 276 16 8 434 6 428 1.04e-30 124
MS.gene073189.t1 AT2G36800 27.586 464 283 17 5 427 9 460 1.01e-29 121
MS.gene073189.t1 AT2G15480 25.490 459 302 13 7 434 9 458 3.27e-29 120
MS.gene073189.t1 AT2G31750 26.190 462 285 17 1 436 1 432 4.32e-29 119
MS.gene073189.t1 AT2G31750 26.304 460 287 16 1 436 1 432 4.59e-29 119
MS.gene073189.t1 AT2G15480 25.828 453 296 13 7 428 9 452 8.23e-29 119
MS.gene073189.t1 AT2G36770 27.887 459 285 17 6 427 12 461 9.55e-29 119
MS.gene073189.t1 AT2G15490 26.258 457 293 14 7 430 6 451 9.60e-29 118
MS.gene073189.t1 AT2G18570 25.974 462 294 15 1 434 1 442 9.67e-29 118
MS.gene073189.t1 AT2G15490 26.304 460 292 15 7 430 6 454 1.17e-28 118
MS.gene073189.t1 AT1G10400 26.096 479 301 21 7 452 6 464 1.69e-28 117
MS.gene073189.t1 AT2G16890 27.804 428 272 18 8 412 9 422 2.28e-28 116
MS.gene073189.t1 AT2G36750 29.258 458 264 21 6 421 8 447 2.47e-28 117
MS.gene073189.t1 AT4G34135 27.790 457 258 20 7 416 10 441 2.84e-28 117
MS.gene073189.t1 AT1G05680 27.009 448 281 15 8 434 6 428 3.93e-28 116
MS.gene073189.t1 AT2G36780 28.322 459 281 19 7 427 13 461 5.03e-28 116
MS.gene073189.t1 AT5G14860 25.553 497 305 17 1 454 1 475 2.65e-27 114
MS.gene073189.t1 AT4G34138 25.532 470 272 15 5 424 8 449 2.69e-27 114
MS.gene073189.t1 AT2G31790 26.316 456 276 18 8 434 8 432 7.22e-27 112
MS.gene073189.t1 AT3G53150 27.484 473 277 18 7 427 21 479 2.32e-26 112
MS.gene073189.t1 AT1G01420 26.539 471 266 16 8 434 11 445 8.19e-26 110
MS.gene073189.t1 AT1G01420 26.539 471 266 16 8 434 8 442 8.80e-26 110
MS.gene073189.t1 AT2G36760 27.293 458 274 17 6 421 12 452 1.70e-25 109
MS.gene073189.t1 AT2G18560 30.588 255 150 7 201 434 104 352 4.33e-25 106
MS.gene073189.t1 AT4G01070 35.047 214 121 6 236 435 235 444 1.56e-24 106
MS.gene073189.t1 AT2G43820 24.145 468 292 17 8 449 7 437 3.25e-24 105
MS.gene073189.t1 AT3G50740 24.026 462 298 15 8 435 7 449 2.25e-23 102
MS.gene073189.t1 AT5G59580 26.068 468 296 18 8 454 9 447 2.44e-23 102
MS.gene073189.t1 AT3G53160 25.380 461 301 19 1 427 1 452 2.71e-23 102
MS.gene073189.t1 AT3G46670 25.160 469 318 17 2 457 3 451 5.48e-23 101
MS.gene073189.t1 AT2G36790 26.609 466 290 19 2 427 7 460 1.11e-22 100
MS.gene073189.t1 AT5G59590 24.464 466 307 19 8 454 10 449 4.37e-22 99.0
MS.gene073189.t1 AT4G15480 32.273 220 131 8 227 434 241 454 1.20e-21 97.8
MS.gene073189.t1 AT1G07250 27.341 267 179 7 203 456 210 474 2.18e-21 97.1
MS.gene073189.t1 AT2G36970 23.282 451 314 14 8 437 10 449 2.27e-21 97.1
MS.gene073189.t1 AT2G29730 31.720 186 119 4 251 433 260 440 2.59e-21 96.7
MS.gene073189.t1 AT5G66690 24.229 454 300 15 8 435 7 442 2.96e-21 96.7
MS.gene073189.t1 AT2G43840 31.053 190 121 4 259 448 257 436 5.66e-21 95.5
MS.gene073189.t1 AT2G43840 31.053 190 121 4 259 448 257 436 6.63e-21 95.1
MS.gene073189.t1 AT4G15280 30.841 214 130 4 257 454 294 505 1.06e-20 95.1
MS.gene073189.t1 AT4G15280 30.841 214 130 4 257 454 262 473 1.24e-20 94.7
MS.gene073189.t1 AT2G30140 24.942 433 287 17 8 427 13 420 1.41e-20 94.4
MS.gene073189.t1 AT3G21760 29.907 214 132 5 257 454 269 480 2.45e-20 94.0
MS.gene073189.t1 AT2G30140 24.943 437 281 18 8 427 13 419 2.86e-20 93.6
MS.gene073189.t1 AT4G15260 29.767 215 132 5 257 454 142 354 3.21e-20 92.4
MS.gene073189.t1 AT3G21800 30.233 215 131 4 257 454 263 475 4.57e-20 92.8
MS.gene073189.t1 AT2G30150 23.093 485 309 20 4 458 6 456 5.26e-20 92.8
MS.gene073189.t1 AT1G01390 26.840 462 267 21 8 427 8 440 6.47e-20 92.4
MS.gene073189.t1 AT5G05880 25.390 449 280 20 1 425 1 418 6.73e-20 92.4
MS.gene073189.t1 AT1G01390 26.840 462 267 21 8 427 25 457 7.44e-20 92.4
MS.gene073189.t1 AT4G15550 22.440 459 318 15 2 436 7 451 1.24e-19 91.7
MS.gene073189.t1 AT5G26310 28.936 235 144 5 236 452 233 462 1.41e-19 91.7
MS.gene073189.t1 AT3G11340 23.973 438 294 15 9 434 10 420 2.65e-19 90.5
MS.gene073189.t1 AT3G21790 28.405 257 160 6 220 454 224 478 2.94e-19 90.5
MS.gene073189.t1 AT3G46660 33.333 216 123 9 236 445 237 437 4.18e-19 90.1
MS.gene073189.t1 AT5G05860 24.615 455 294 16 7 445 8 429 4.19e-19 89.7
MS.gene073189.t1 AT2G29710 31.795 195 119 6 245 433 254 440 8.98e-19 89.0
MS.gene073189.t1 AT3G21560 31.667 180 113 6 257 434 277 448 9.69e-19 89.0
MS.gene073189.t1 AT1G24100 29.688 192 126 4 257 448 266 448 1.19e-18 88.6
MS.gene073189.t1 AT1G22360 24.043 470 291 19 8 436 10 454 1.28e-18 88.6
MS.gene073189.t1 AT3G21750 27.615 239 151 5 236 454 232 468 1.32e-18 88.6
MS.gene073189.t1 AT4G15500 32.044 181 113 6 257 435 267 439 1.44e-18 88.6
MS.gene073189.t1 AT5G05870 28.270 237 154 7 206 435 204 431 1.51e-18 88.2
MS.gene073189.t1 AT3G21780 29.439 214 133 5 257 454 257 468 2.22e-18 87.8
MS.gene073189.t1 AT4G15490 23.276 464 304 16 1 434 1 442 2.57e-18 87.8
MS.gene073189.t1 AT5G38040 25.435 460 294 19 16 454 18 449 2.64e-18 87.4
MS.gene073189.t1 AT3G22250 32.178 202 107 9 257 450 274 453 2.80e-18 87.4
MS.gene073189.t1 AT2G30150 22.833 473 304 19 13 458 2 440 3.52e-18 87.0
MS.gene073189.t1 AT3G16520 32.240 183 113 4 257 435 261 436 5.26e-18 86.7
MS.gene073189.t1 AT3G16520 31.443 194 122 4 257 446 261 447 5.32e-18 86.7
MS.gene073189.t1 AT3G16520 32.240 183 113 4 257 435 261 436 5.43e-18 86.7
MS.gene073189.t1 AT5G05890 28.631 241 157 7 201 434 198 430 5.73e-18 86.7
MS.gene073189.t1 AT3G55700 28.980 245 162 7 206 445 203 440 7.43e-18 86.3
MS.gene073189.t1 AT2G29740 31.000 200 128 6 236 427 250 447 1.16e-17 85.5
MS.gene073189.t1 AT1G05530 25.781 256 162 7 222 455 206 455 2.26e-17 84.7
MS.gene073189.t1 AT1G07240 31.797 217 136 7 227 434 242 455 2.41e-17 84.7
MS.gene073189.t1 AT1G07260 27.511 229 154 6 236 454 245 471 4.47e-17 84.0
MS.gene073189.t1 AT1G22400 23.581 458 291 17 8 427 13 449 4.64e-17 84.0
MS.gene073189.t1 AT2G23250 28.879 232 147 7 235 454 210 435 6.12e-17 83.2
MS.gene073189.t1 AT3G55710 31.217 189 121 5 259 445 263 444 6.64e-17 83.2
MS.gene073189.t1 AT1G22360 24.065 428 266 17 8 394 10 419 2.13e-16 81.6
MS.gene073189.t1 AT5G38010 24.784 464 285 20 8 445 10 435 4.26e-16 80.9
MS.gene073189.t1 AT2G29750 31.351 185 117 6 241 417 255 437 4.35e-16 80.9
MS.gene073189.t1 AT1G05560 27.803 223 140 7 241 448 275 491 5.30e-16 80.9
MS.gene073189.t1 AT2G23260 28.638 213 131 6 235 432 223 429 6.02e-16 80.1
MS.gene073189.t1 AT1G06000 23.844 411 243 15 8 394 10 374 6.24e-16 80.1
MS.gene073189.t1 AT1G05560 26.446 242 157 7 222 448 206 441 6.26e-16 80.1
MS.gene073189.t1 AT4G14090 27.778 234 153 8 223 448 220 445 1.29e-15 79.3
MS.gene073189.t1 AT3G46690 29.000 200 132 6 202 394 196 392 2.11e-15 78.6
MS.gene073189.t1 AT1G78270 27.717 184 124 5 253 436 283 457 1.12e-14 76.6
MS.gene073189.t1 AT1G22380 22.246 463 308 17 8 436 13 457 4.94e-14 74.3
MS.gene073189.t1 AT1G22340 22.246 472 298 20 8 436 13 458 7.63e-14 73.9
MS.gene073189.t1 AT2G26480 26.848 257 165 10 197 445 186 427 9.33e-14 73.6
MS.gene073189.t1 AT5G17030 26.180 233 152 8 210 436 215 433 1.65e-13 72.8
MS.gene073189.t1 AT3G46720 22.851 442 282 14 8 428 9 412 2.20e-13 72.4
MS.gene073189.t1 AT3G02100 30.114 176 106 5 257 432 277 435 2.24e-13 72.4
MS.gene073189.t1 AT5G05900 25.000 244 161 9 207 436 205 440 2.73e-13 72.0
MS.gene073189.t1 AT5G17040 26.111 180 120 5 257 436 251 417 6.08e-12 67.8
MS.gene073189.t1 AT5G17040 26.111 180 120 5 257 436 149 315 1.36e-11 66.2

Find 90 sgRNAs with CRISPR-Local

Find 106 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAAAACCTGTTCTGCTTTC+AGG 0.078488 2.3:+14260794 MS.gene073189:CDS
AGTGATGAGTTCAAAATTTA+AGG 0.083249 2.3:+14261240 MS.gene073189:CDS
AAAGGAAAAGGGATTGTTTA+TGG 0.197222 2.3:+14261064 MS.gene073189:CDS
AGGATATTGAACTTCTTCTA+AGG 0.265020 2.3:+14260390 MS.gene073189:CDS
CCAAGGTAAGCTGATGATAT+TGG 0.272835 2.3:-14260512 None:intergenic
AAAGTCTTCAATACTTGATA+TGG 0.289217 2.3:+14260486 MS.gene073189:CDS
ATCCTTTCATTGAACCCTTC+TGG 0.290366 2.3:-14261040 None:intergenic
ATCACAGTTCCTCATGTTAA+TGG 0.297077 2.3:+14260284 MS.gene073189:CDS
TCGACCAGGAAAATAGAATT+TGG 0.319466 2.3:+14260653 MS.gene073189:CDS
AAGGGATTGTTTATGGAAGT+TGG 0.335805 2.3:+14261071 MS.gene073189:CDS
ATTAGAACAAAATCAATTTC+AGG 0.343025 2.3:+14260928 MS.gene073189:CDS
TTACTTGGTCTTGAATTAAC+AGG 0.344148 2.3:+14260956 MS.gene073189:CDS
TTGTTTGAGAAGTGAAGATA+TGG 0.359782 2.3:-14260158 None:intergenic
GGGTTCAATGAAAGGATTAA+AGG 0.361758 2.3:+14261046 MS.gene073189:CDS
GTTCAATATCCTTCTCTGTT+TGG 0.364016 2.3:-14260379 None:intergenic
TCACTCTTGCATTCATGATA+TGG 0.369150 2.3:-14261222 None:intergenic
TAAAACTTGATGGATGAATC+AGG 0.371051 2.3:-14260605 None:intergenic
TTCTCCTCTAAAGTAGCTTT+CGG 0.371240 2.3:-14260836 None:intergenic
CAATTTCAGGAGTTGTTACT+TGG 0.377973 2.3:+14260941 MS.gene073189:CDS
AATGTTTCCTTGGTTTGCTA+TGG 0.379293 2.3:+14260124 MS.gene073189:CDS
GCAGCACTTAAGCCACCTAT+TGG 0.380205 2.3:+14260992 MS.gene073189:CDS
TCAATTGTTTCAAATCCAAT+AGG 0.386383 2.3:-14261007 None:intergenic
GGCTTAAGTGCTGCAAGAAA+TGG 0.387827 2.3:-14260983 None:intergenic
GAAATGGTTAACATGGCTTA+AGG 0.394243 2.3:+14260856 MS.gene073189:CDS
TGCACATAGCAATGTTTCCT+TGG 0.396741 2.3:+14260114 MS.gene073189:CDS
ATCCTTCTCTGTTTGGTCCA+TGG 0.404687 2.3:-14260372 None:intergenic
ATGAAAGGATTAAAGGAAAA+GGG 0.406889 2.3:+14261053 MS.gene073189:CDS
TTCATGTGAATAAAACTTGA+TGG 0.412003 2.3:-14260615 None:intergenic
TTCGGTGCCTCAGGTAATAA+AGG 0.413935 2.3:-14260818 None:intergenic
TCAAACAAATTAGCATTAAG+AGG 0.414964 2.3:+14260173 MS.gene073189:CDS
AAAGGTTGCAGAGAAATTGA+TGG 0.422926 2.3:+14260740 MS.gene073189:CDS
AAATCAAAGAAAACTATTTG+TGG 0.424765 2.3:-14260422 None:intergenic
AATGAAAGGATTAAAGGAAA+AGG 0.426984 2.3:+14261052 MS.gene073189:CDS
AAGCTACTTTAGAGGAGAAA+TGG 0.428441 2.3:+14260840 MS.gene073189:CDS
AAATGGTTAACATGGCTTAA+GGG 0.439679 2.3:+14260857 MS.gene073189:CDS
TTAACATGAGGAACTGTGAT+AGG 0.442956 2.3:-14260281 None:intergenic
AAAGGACCTGAAAGCAGAAC+AGG 0.445486 2.3:-14260800 None:intergenic
ATGGATGATGAGAATGAGAT+TGG 0.447685 2.3:+14261340 MS.gene073189:CDS
AGGTAATAAGATTTGGATGA+AGG 0.449694 2.3:-14260253 None:intergenic
ATTCTTGAACACCCTTCTGT+TGG 0.454707 2.3:+14261109 MS.gene073189:CDS
GGCACCGAAAGCTACTTTAG+AGG 0.459571 2.3:+14260832 MS.gene073189:CDS
ATGAGTTCAAAATTTAAGGT+TGG 0.464320 2.3:+14261244 MS.gene073189:CDS
TACCAGAAGGGTTCAATGAA+AGG 0.468184 2.3:+14261038 MS.gene073189:CDS
CTGGTGCTGTTGCCACGTCT+TGG 0.479294 2.3:+14261193 MS.gene073189:CDS
AAAGTAGCTTTCGGTGCCTC+AGG 0.479624 2.3:-14260827 None:intergenic
TTCAAAATTTAAGGTTGGTG+TGG 0.481309 2.3:+14261249 MS.gene073189:CDS
GTTGAGAAAGGTGATGAAGA+TGG 0.486792 2.3:+14261274 MS.gene073189:CDS
ATGTTTCCTTGGTTTGCTAT+GGG 0.491983 2.3:+14260125 MS.gene073189:CDS
TTGTATGACCGCGTTGACAT+AGG 0.493864 2.3:+14260689 MS.gene073189:CDS
TTGAAGAAGCTTTACCAGAA+GGG 0.495315 2.3:+14261026 MS.gene073189:CDS
ATGATTCTAAATTGTTGCTA+AGG 0.495803 2.3:-14261405 None:intergenic
ATTCTAAATTGTTGCTAAGG+AGG 0.503967 2.3:-14261402 None:intergenic
TTCAGGTCCTTTATTACCTG+AGG 0.510397 2.3:+14260811 MS.gene073189:CDS
TCAGATGCAGTTGCTTTCAA+AGG 0.512600 2.3:+14260722 MS.gene073189:CDS
CCCTCTCATTGCTACAGCCA+TGG 0.524219 2.3:+14260355 MS.gene073189:CDS
CCAATATCATCAGCTTACCT+TGG 0.525225 2.3:+14260512 MS.gene073189:CDS
GATGAATCAGGGAACCCTGC+AGG 0.536494 2.3:-14260593 None:intergenic
GGATATTGAACTTCTTCTAA+GGG 0.545788 2.3:+14260391 MS.gene073189:CDS
ATTGTTTCAAATCCAATAGG+TGG 0.549952 2.3:-14261004 None:intergenic
TTCGCTTCTTAGCTTCGACC+AGG 0.551610 2.3:+14260639 MS.gene073189:CDS
TTGAGAAAGGTGATGAAGAT+GGG 0.554445 2.3:+14261275 MS.gene073189:CDS
ATTGAAGAAGCTTTACCAGA+AGG 0.555764 2.3:+14261025 MS.gene073189:CDS
TAGAGGAGAAATGGTTAACA+TGG 0.564341 2.3:+14260849 MS.gene073189:CDS
TGGAGCTGCTTCTATAACCG+AGG 0.566053 2.3:+14261150 MS.gene073189:CDS
ATTGCTATGTGCAAAGGAGA+AGG 0.567370 2.3:-14260104 None:intergenic
ACTTGTTAACACGTGTCAGC+TGG 0.567449 2.3:+14261174 MS.gene073189:CDS
GGGATTCAAACATGGTTCAG+TGG 0.575236 2.3:+14260877 MS.gene073189:CDS
CAAAGCTGTGAAAATTGTGA+TGG 0.587557 2.3:+14261321 MS.gene073189:CDS
AATGAGAGGGAATAAAGAAG+AGG 0.588167 2.3:-14260342 None:intergenic
GTTATGAAACATCCAACAGA+AGG 0.588945 2.3:-14261121 None:intergenic
TGGCTTAAGGGATTCAAACA+TGG 0.589723 2.3:+14260869 MS.gene073189:CDS
GGAAACATTGCTATGTGCAA+AGG 0.594499 2.3:-14260110 None:intergenic
AAAACTTGATGGATGAATCA+GGG 0.602785 2.3:-14260604 None:intergenic
ATGAGAGGGAATAAAGAAGA+GGG 0.605864 2.3:-14260341 None:intergenic
ACACGTGTTAACAAGTCCCT+CGG 0.621993 2.3:-14261167 None:intergenic
TCTTGCATTCATGATATGGT+CGG 0.630908 2.3:-14261218 None:intergenic
GTTGGTGTGGAAGTTGAGAA+AGG 0.637430 2.3:+14261262 MS.gene073189:CDS
AGGAAAATAGAATTTGGCAG+TGG 0.637851 2.3:+14260659 MS.gene073189:CDS
TCCATGGCTGTAGCAATGAG+AGG 0.638914 2.3:-14260356 None:intergenic
CCATGGCTGTAGCAATGAGA+GGG 0.646127 2.3:-14260355 None:intergenic
AGCCATGGACCAAACAGAGA+AGG 0.647882 2.3:+14260370 MS.gene073189:CDS
GAATCAGGGAACCCTGCAGG+TGG 0.654651 2.3:-14260590 None:intergenic
GGAGCTGCTTCTATAACCGA+GGG 0.662402 2.3:+14261151 MS.gene073189:CDS
GAAGTAGTTTCAGCATCATG+AGG 0.663497 2.3:-14260311 None:intergenic
AAGTGTCCCATAGCAAACCA+AGG 0.664111 2.3:-14260131 None:intergenic
TGAGGAAGACCATTAACATG+AGG 0.685206 2.3:-14260293 None:intergenic
ATATGGTCGGAACCAAGACG+TGG 0.688479 2.3:-14261205 None:intergenic
TTATGAAACATCCAACAGAA+GGG 0.698749 2.3:-14261120 None:intergenic
GGATGTTTCATAACACACTG+TGG 0.766209 2.3:+14261130 MS.gene073189:CDS
ACTTTGTGCCTATGTCAACG+CGG 0.796524 2.3:-14260697 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTCTTTGATTTTCAATAT+TGG + chr2.3:14260432-14260451 MS.gene073189:CDS 15.0%
!! AAATCAAAGAAAACTATTTG+TGG - chr2.3:14260425-14260444 None:intergenic 20.0%
!! ATTAGAACAAAATCAATTTC+AGG + chr2.3:14260928-14260947 MS.gene073189:CDS 20.0%
!!! TGAAATTGATTTTGTTCTAA+TGG - chr2.3:14260929-14260948 None:intergenic 20.0%
! AAAGTCTTCAATACTTGATA+TGG + chr2.3:14260486-14260505 MS.gene073189:CDS 25.0%
! AATATACCAAGAAAAAGTCA+AGG + chr2.3:14260536-14260555 MS.gene073189:CDS 25.0%
! AATGAAAGGATTAAAGGAAA+AGG + chr2.3:14261052-14261071 MS.gene073189:CDS 25.0%
! AGTGATGAGTTCAAAATTTA+AGG + chr2.3:14261240-14261259 MS.gene073189:CDS 25.0%
! ATGAAAGGATTAAAGGAAAA+GGG + chr2.3:14261053-14261072 MS.gene073189:CDS 25.0%
! ATGATTCTAAATTGTTGCTA+AGG - chr2.3:14261408-14261427 None:intergenic 25.0%
! GGAAAAAAGGTAATAAGATT+TGG - chr2.3:14260263-14260282 None:intergenic 25.0%
! TCAAACAAATTAGCATTAAG+AGG + chr2.3:14260173-14260192 MS.gene073189:CDS 25.0%
! TCAATTGTTTCAAATCCAAT+AGG - chr2.3:14261010-14261029 None:intergenic 25.0%
! TTCATGTGAATAAAACTTGA+TGG - chr2.3:14260618-14260637 None:intergenic 25.0%
!! ATGAGTTCAAAATTTAAGGT+TGG + chr2.3:14261244-14261263 MS.gene073189:CDS 25.0%
!! GATTATCTTCAAACTGTTTT+TGG + chr2.3:14260773-14260792 MS.gene073189:CDS 25.0%
!! TTTTTCTTGGTATATTTCCA+AGG - chr2.3:14260532-14260551 None:intergenic 25.0%
!!! AACTTGTTGAGTGTATTTTT+AGG - chr2.3:14260221-14260240 None:intergenic 25.0%
AAAGGAAAAGGGATTGTTTA+TGG + chr2.3:14261064-14261083 MS.gene073189:CDS 30.0%
AAATGGTTAACATGGCTTAA+GGG + chr2.3:14260857-14260876 MS.gene073189:CDS 30.0%
AGGATATTGAACTTCTTCTA+AGG + chr2.3:14260390-14260409 MS.gene073189:CDS 30.0%
AGGTAATAAGATTTGGATGA+AGG - chr2.3:14260256-14260275 None:intergenic 30.0%
ATTCTAAATTGTTGCTAAGG+AGG - chr2.3:14261405-14261424 None:intergenic 30.0%
ATTGTTTCAAATCCAATAGG+TGG - chr2.3:14261007-14261026 None:intergenic 30.0%
CCAAACTTGACTAAAAAACT+TGG + chr2.3:14260458-14260477 MS.gene073189:CDS 30.0%
GGATATTGAACTTCTTCTAA+GGG + chr2.3:14260391-14260410 MS.gene073189:CDS 30.0%
TTATGAAACATCCAACAGAA+GGG - chr2.3:14261123-14261142 None:intergenic 30.0%
TTGTTTGAGAAGTGAAGATA+TGG - chr2.3:14260161-14260180 None:intergenic 30.0%
! AAAACTTGATGGATGAATCA+GGG - chr2.3:14260607-14260626 None:intergenic 30.0%
! TAAAACTTGATGGATGAATC+AGG - chr2.3:14260608-14260627 None:intergenic 30.0%
!! TATGTTCCTTGACTTTTTCT+TGG - chr2.3:14260545-14260564 None:intergenic 30.0%
!! TTACTTGGTCTTGAATTAAC+AGG + chr2.3:14260956-14260975 MS.gene073189:CDS 30.0%
!! TTCAAAATTTAAGGTTGGTG+TGG + chr2.3:14261249-14261268 MS.gene073189:CDS 30.0%
!!! CCAAGTTTTTTAGTCAAGTT+TGG - chr2.3:14260461-14260480 None:intergenic 30.0%
AAAGGTTGCAGAGAAATTGA+TGG + chr2.3:14260740-14260759 MS.gene073189:CDS 35.0%
AAGGGATTGTTTATGGAAGT+TGG + chr2.3:14261071-14261090 MS.gene073189:CDS 35.0%
AATGAGAGGGAATAAAGAAG+AGG - chr2.3:14260345-14260364 None:intergenic 35.0%
AGGAAAATAGAATTTGGCAG+TGG + chr2.3:14260659-14260678 MS.gene073189:CDS 35.0%
AGGAACTGTGATAGGAAAAA+AGG - chr2.3:14260276-14260295 None:intergenic 35.0%
ATCACAGTTCCTCATGTTAA+TGG + chr2.3:14260284-14260303 MS.gene073189:CDS 35.0%
ATGAGAGGGAATAAAGAAGA+GGG - chr2.3:14260344-14260363 None:intergenic 35.0%
ATGGATGATGAGAATGAGAT+TGG + chr2.3:14261340-14261359 MS.gene073189:CDS 35.0%
ATTGAAGAAGCTTTACCAGA+AGG + chr2.3:14261025-14261044 MS.gene073189:CDS 35.0%
CAAAGCTGTGAAAATTGTGA+TGG + chr2.3:14261321-14261340 MS.gene073189:CDS 35.0%
CAATTTCAGGAGTTGTTACT+TGG + chr2.3:14260941-14260960 MS.gene073189:CDS 35.0%
GAAATGGTTAACATGGCTTA+AGG + chr2.3:14260856-14260875 MS.gene073189:CDS 35.0%
GGGTTCAATGAAAGGATTAA+AGG + chr2.3:14261046-14261065 MS.gene073189:CDS 35.0%
GTTATGAAACATCCAACAGA+AGG - chr2.3:14261124-14261143 None:intergenic 35.0%
GTTCAATATCCTTCTCTGTT+TGG - chr2.3:14260382-14260401 None:intergenic 35.0%
TAGAGGAGAAATGGTTAACA+TGG + chr2.3:14260849-14260868 MS.gene073189:CDS 35.0%
TCACTCTTGCATTCATGATA+TGG - chr2.3:14261225-14261244 None:intergenic 35.0%
TCGACCAGGAAAATAGAATT+TGG + chr2.3:14260653-14260672 MS.gene073189:CDS 35.0%
TCTTGCATTCATGATATGGT+CGG - chr2.3:14261221-14261240 None:intergenic 35.0%
TTAACATGAGGAACTGTGAT+AGG - chr2.3:14260284-14260303 None:intergenic 35.0%
TTGAAGAAGCTTTACCAGAA+GGG + chr2.3:14261026-14261045 MS.gene073189:CDS 35.0%
TTGAGAAAGGTGATGAAGAT+GGG + chr2.3:14261275-14261294 MS.gene073189:CDS 35.0%
! AAGCTACTTTAGAGGAGAAA+TGG + chr2.3:14260840-14260859 MS.gene073189:CDS 35.0%
! ACTGCCAAATTCTATTTTCC+TGG - chr2.3:14260660-14260679 None:intergenic 35.0%
! TTTTGTGCATATGGAAGTGA+AGG + chr2.3:14260902-14260921 MS.gene073189:CDS 35.0%
!! AATGTTTCCTTGGTTTGCTA+TGG + chr2.3:14260124-14260143 MS.gene073189:CDS 35.0%
!! ATGTTTCCTTGGTTTGCTAT+GGG + chr2.3:14260125-14260144 MS.gene073189:CDS 35.0%
!! TTCTCCTCTAAAGTAGCTTT+CGG - chr2.3:14260839-14260858 None:intergenic 35.0%
!!! TCAGTGGTTTTTTGTGCATA+TGG + chr2.3:14260893-14260912 MS.gene073189:CDS 35.0%
ATCCTTTCATTGAACCCTTC+TGG - chr2.3:14261043-14261062 None:intergenic 40.0%
ATCTCAAAAAACCACCTGCA+GGG + chr2.3:14260579-14260598 MS.gene073189:CDS 40.0%
ATTCTTGAACACCCTTCTGT+TGG + chr2.3:14261109-14261128 MS.gene073189:CDS 40.0%
ATTGCTATGTGCAAAGGAGA+AGG - chr2.3:14260107-14260126 None:intergenic 40.0%
CCAAGGTAAGCTGATGATAT+TGG - chr2.3:14260515-14260534 None:intergenic 40.0%
CCAATATCATCAGCTTACCT+TGG + chr2.3:14260512-14260531 MS.gene073189:CDS 40.0%
GAAGTAGTTTCAGCATCATG+AGG - chr2.3:14260314-14260333 None:intergenic 40.0%
GGAAACATTGCTATGTGCAA+AGG - chr2.3:14260113-14260132 None:intergenic 40.0%
GGATGTTTCATAACACACTG+TGG + chr2.3:14261130-14261149 MS.gene073189:CDS 40.0%
GTTGAGAAAGGTGATGAAGA+TGG + chr2.3:14261274-14261293 MS.gene073189:CDS 40.0%
TACCAGAAGGGTTCAATGAA+AGG + chr2.3:14261038-14261057 MS.gene073189:CDS 40.0%
TGAGGAAGACCATTAACATG+AGG - chr2.3:14260296-14260315 None:intergenic 40.0%
TGCACATAGCAATGTTTCCT+TGG + chr2.3:14260114-14260133 MS.gene073189:CDS 40.0%
TGGCTTAAGGGATTCAAACA+TGG + chr2.3:14260869-14260888 MS.gene073189:CDS 40.0%
TTCAGGTCCTTTATTACCTG+AGG + chr2.3:14260811-14260830 MS.gene073189:CDS 40.0%
! TCAGATGCAGTTGCTTTCAA+AGG + chr2.3:14260722-14260741 MS.gene073189:CDS 40.0%
AAAGGACCTGAAAGCAGAAC+AGG - chr2.3:14260803-14260822 None:intergenic 45.0%
AAGTGTCCCATAGCAAACCA+AGG - chr2.3:14260134-14260153 None:intergenic 45.0%
ACACGTGTTAACAAGTCCCT+CGG - chr2.3:14261170-14261189 None:intergenic 45.0%
ACTTTGTGCCTATGTCAACG+CGG - chr2.3:14260700-14260719 None:intergenic 45.0%
ATCCTTCTCTGTTTGGTCCA+TGG - chr2.3:14260375-14260394 None:intergenic 45.0%
GATCTCAAAAAACCACCTGC+AGG + chr2.3:14260578-14260597 MS.gene073189:CDS 45.0%
GGAAAACCTGTTCTGCTTTC+AGG + chr2.3:14260794-14260813 MS.gene073189:CDS 45.0%
GGGATTCAAACATGGTTCAG+TGG + chr2.3:14260877-14260896 MS.gene073189:CDS 45.0%
GTTGGTGTGGAAGTTGAGAA+AGG + chr2.3:14261262-14261281 MS.gene073189:CDS 45.0%
! ACTTGTTAACACGTGTCAGC+TGG + chr2.3:14261174-14261193 MS.gene073189:CDS 45.0%
! GGCTTAAGTGCTGCAAGAAA+TGG - chr2.3:14260986-14261005 None:intergenic 45.0%
! TTGTATGACCGCGTTGACAT+AGG + chr2.3:14260689-14260708 MS.gene073189:CDS 45.0%
!! TTCGGTGCCTCAGGTAATAA+AGG - chr2.3:14260821-14260840 None:intergenic 45.0%
AGCCATGGACCAAACAGAGA+AGG + chr2.3:14260370-14260389 MS.gene073189:CDS 50.0%
ATATGGTCGGAACCAAGACG+TGG - chr2.3:14261208-14261227 None:intergenic 50.0%
CCATGGCTGTAGCAATGAGA+GGG - chr2.3:14260358-14260377 None:intergenic 50.0%
GCAGCACTTAAGCCACCTAT+TGG + chr2.3:14260992-14261011 MS.gene073189:CDS 50.0%
GGAGCTGCTTCTATAACCGA+GGG + chr2.3:14261151-14261170 MS.gene073189:CDS 50.0%
TCCATGGCTGTAGCAATGAG+AGG - chr2.3:14260359-14260378 None:intergenic 50.0%
TGGAGCTGCTTCTATAACCG+AGG + chr2.3:14261150-14261169 MS.gene073189:CDS 50.0%
TTCGCTTCTTAGCTTCGACC+AGG + chr2.3:14260639-14260658 MS.gene073189:CDS 50.0%
! GGCACCGAAAGCTACTTTAG+AGG + chr2.3:14260832-14260851 MS.gene073189:CDS 50.0%
!! AAAGTAGCTTTCGGTGCCTC+AGG - chr2.3:14260830-14260849 None:intergenic 50.0%
CCCTCTCATTGCTACAGCCA+TGG + chr2.3:14260355-14260374 MS.gene073189:CDS 55.0%
GATGAATCAGGGAACCCTGC+AGG - chr2.3:14260596-14260615 None:intergenic 55.0%
GAATCAGGGAACCCTGCAGG+TGG - chr2.3:14260593-14260612 None:intergenic 60.0%
!! CTGGTGCTGTTGCCACGTCT+TGG + chr2.3:14261193-14261212 MS.gene073189:CDS 60.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 14260095 14261471 14260095 ID=MS.gene073189
chr2.3 mRNA 14260095 14261471 14260095 ID=MS.gene073189.t1;Parent=MS.gene073189
chr2.3 exon 14260095 14261471 14260095 ID=MS.gene073189.t1.exon1;Parent=MS.gene073189.t1
chr2.3 CDS 14260095 14261471 14260095 ID=cds.MS.gene073189.t1;Parent=MS.gene073189.t1
Gene Sequence

>MS.gene073189

ATGGATGCTCCTTCTCCTTTGCACATAGCAATGTTTCCTTGGTTTGCTATGGGACACTTAACTCCATATCTTCACTTCTCAAACAAATTAGCATTAAGAGGTCACAAAATATCATTCTTCATACCTAAAAATACACTCAACAAGTTGCAACATCTCAACCTTCATCCAAATCTTATTACCTTTTTTCCTATCACAGTTCCTCATGTTAATGGTCTTCCTCATGATGCTGAAACTACTTCAGATGTACCCTCTTCTTTATTCCCTCTCATTGCTACAGCCATGGACCAAACAGAGAAGGATATTGAACTTCTTCTAAGGGAACTAAAGCCACAAATAGTTTTCTTTGATTTTCAATATTGGCTACCAAACTTGACTAAAAAACTTGGTATCAAAAGTCTTCAATACTTGATATGGAATCCAATATCATCAGCTTACCTTGGAAATATACCAAGAAAAAGTCAAGGAACATATTTAACTAAAGATGATCTCAAAAAACCACCTGCAGGGTTCCCTGATTCATCCATCAAGTTTTATTCACATGAACTTCGCTTCTTAGCTTCGACCAGGAAAATAGAATTTGGCAGTGGTGTTTTATTGTATGACCGCGTTGACATAGGCACAAAGTTTTCAGATGCAGTTGCTTTCAAAGGTTGCAGAGAAATTGATGGCTTATATGCTGATTATCTTCAAACTGTTTTTGGAAAACCTGTTCTGCTTTCAGGTCCTTTATTACCTGAGGCACCGAAAGCTACTTTAGAGGAGAAATGGTTAACATGGCTTAAGGGATTCAAACATGGTTCAGTGGTTTTTTGTGCATATGGAAGTGAAGGTCCATTAGAACAAAATCAATTTCAGGAGTTGTTACTTGGTCTTGAATTAACAGGTTTTCCATTTCTTGCAGCACTTAAGCCACCTATTGGATTTGAAACAATTGAAGAAGCTTTACCAGAAGGGTTCAATGAAAGGATTAAAGGAAAAGGGATTGTTTATGGAAGTTGGATTCAACAACAGTTGATTCTTGAACACCCTTCTGTTGGATGTTTCATAACACACTGTGGAGCTGCTTCTATAACCGAGGGACTTGTTAACACGTGTCAGCTGGTGCTGTTGCCACGTCTTGGTTCCGACCATATCATGAATGCAAGAGTGATGAGTTCAAAATTTAAGGTTGGTGTGGAAGTTGAGAAAGGTGATGAAGATGGGTTGTTTACAAAAGAAAGTGTGTGCAAAGCTGTGAAAATTGTGATGGATGATGAGAATGAGATTGGAAGAGAAGTGAGAGCAAATCATGCAAAAATGAGAAACTTCCTCCTTAGCAACAATTTAGAATCATCATGTGTCGATAGTTTCTGTCAGAAACTTTATCATTTGCTCTAG

Protein sequence

>MS.gene073189.t1

MDAPSPLHIAMFPWFAMGHLTPYLHFSNKLALRGHKISFFIPKNTLNKLQHLNLHPNLITFFPITVPHVNGLPHDAETTSDVPSSLFPLIATAMDQTEKDIELLLRELKPQIVFFDFQYWLPNLTKKLGIKSLQYLIWNPISSAYLGNIPRKSQGTYLTKDDLKKPPAGFPDSSIKFYSHELRFLASTRKIEFGSGVLLYDRVDIGTKFSDAVAFKGCREIDGLYADYLQTVFGKPVLLSGPLLPEAPKATLEEKWLTWLKGFKHGSVVFCAYGSEGPLEQNQFQELLLGLELTGFPFLAALKPPIGFETIEEALPEGFNERIKGKGIVYGSWIQQQLILEHPSVGCFITHCGAASITEGLVNTCQLVLLPRLGSDHIMNARVMSSKFKVGVEVEKGDEDGLFTKESVCKAVKIVMDDENEIGREVRANHAKMRNFLLSNNLESSCVDSFCQKLYHLL