AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene92086

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene92086.t1 MTR_2g083480 93.668 458 29 0 1 458 1 458 0.0 873
MS.gene92086.t1 MTR_2g083420 79.039 458 72 1 1 458 1 434 0.0 748
MS.gene92086.t1 MTR_2g083390 78.603 458 74 1 1 458 1 434 0.0 742
MS.gene92086.t1 MTR_2g083430 78.603 458 98 0 1 458 1 458 0.0 722
MS.gene92086.t1 MTR_2g083380 67.031 458 151 0 1 458 18 475 0.0 633
MS.gene92086.t1 MTR_2g083490 65.939 458 156 0 1 458 1 458 0.0 625
MS.gene92086.t1 MTR_4g079270 60.217 460 179 3 1 458 1 458 0.0 585
MS.gene92086.t1 MTR_4g079250 60.652 460 177 3 1 458 1 458 0.0 585
MS.gene92086.t1 MTR_2g014900 59.424 451 182 1 8 458 7 456 0.0 553
MS.gene92086.t1 MTR_2g083360 62.031 453 67 4 6 458 27 374 0.0 530
MS.gene92086.t1 MTR_1g090270 41.901 463 245 11 7 457 14 464 3.63e-116 349
MS.gene92086.t1 MTR_2g086283 56.471 255 59 2 203 457 133 335 8.43e-91 279
MS.gene92086.t1 MTR_2g086283 62.044 137 51 1 11 147 1 136 1.49e-51 177
MS.gene92086.t1 MTR_4g059370 41.411 326 178 6 139 457 72 391 9.75e-81 255
MS.gene92086.t1 MTR_8g068360 32.340 470 297 12 2 458 6 467 2.11e-67 223
MS.gene92086.t1 MTR_8g068330 31.712 473 299 14 1 458 1 464 9.01e-67 221
MS.gene92086.t1 MTR_7g067330 32.251 462 259 14 2 451 3 422 2.14e-65 217
MS.gene92086.t1 MTR_8g068340 32.120 467 295 12 2 454 6 464 3.05e-65 217
MS.gene92086.t1 MTR_4g123553 32.035 462 284 14 6 454 13 457 9.58e-65 216
MS.gene92086.t1 MTR_2g014930 42.069 290 86 6 17 305 9 217 1.09e-63 206
MS.gene92086.t1 MTR_7g067120 33.043 460 258 15 2 451 3 422 1.43e-63 212
MS.gene92086.t1 MTR_2g008225 31.116 466 298 12 2 455 9 463 8.15e-62 208
MS.gene92086.t1 MTR_2g008220 31.330 466 297 13 2 455 8 462 2.50e-61 207
MS.gene92086.t1 MTR_2g008226 32.623 469 286 15 6 454 8 466 9.57e-61 205
MS.gene92086.t1 MTR_4g079280 43.421 228 84 2 11 238 1 183 3.06e-60 195
MS.gene92086.t1 MTR_6g036650 29.574 470 302 13 1 454 11 467 4.14e-57 196
MS.gene92086.t1 MTR_6g042310 30.407 467 283 16 7 454 17 460 7.31e-57 195
MS.gene92086.t1 MTR_2g046620 30.303 462 292 13 6 454 14 458 7.96e-56 192
MS.gene92086.t1 MTR_2g083440 76.471 102 24 0 357 458 11 112 1.37e-48 162
MS.gene92086.t1 MTR_4g077960 28.509 456 286 16 17 454 1 434 2.42e-48 172
MS.gene92086.t1 MTR_1g090280 46.561 189 89 5 261 438 108 295 3.21e-46 162
MS.gene92086.t1 MTR_8g007650 30.233 473 293 17 7 456 6 464 4.33e-46 166
MS.gene92086.t1 MTR_8g007565 30.021 473 294 17 7 456 6 464 5.89e-46 166
MS.gene92086.t1 MTR_5g066410 28.785 469 282 14 11 456 1 440 3.88e-45 163
MS.gene92086.t1 MTR_8g071070 27.310 487 301 16 5 457 4 471 9.00e-36 138
MS.gene92086.t1 MTR_8g066610 27.646 463 293 14 1 433 1 451 9.86e-36 138
MS.gene92086.t1 MTR_2g098430 26.696 457 296 14 9 437 7 452 3.42e-34 134
MS.gene92086.t1 MTR_8g009055 28.289 456 281 16 7 434 5 442 1.52e-30 123
MS.gene92086.t1 MTR_1g062380 27.778 468 284 19 5 432 13 466 3.51e-30 122
MS.gene92086.t1 MTR_5g087620 27.056 462 284 17 8 428 10 459 4.34e-30 122
MS.gene92086.t1 MTR_4g031800 25.458 491 303 16 6 458 7 472 8.11e-30 121
MS.gene92086.t1 MTR_6g023665 25.901 444 293 12 9 428 14 445 9.34e-30 121
MS.gene92086.t1 MTR_0009s0240 27.427 412 267 14 5 397 4 402 1.05e-29 121
MS.gene92086.t1 MTR_5g045970 26.981 467 288 15 5 432 13 465 1.21e-29 121
MS.gene92086.t1 MTR_8g009050 28.298 470 263 17 7 434 5 442 4.19e-29 119
MS.gene92086.t1 MTR_6g488280 36.318 201 114 4 241 428 239 438 8.69e-29 118
MS.gene92086.t1 MTR_0428s0010 36.318 201 114 4 241 428 239 438 8.69e-29 118
MS.gene92086.t1 MTR_3g435310 35.751 193 117 4 258 450 227 412 1.56e-27 114
MS.gene92086.t1 MTR_3g435310 32.353 136 87 4 6 138 16 149 8.54e-16 79.7
MS.gene92086.t1 MTR_7g070660 23.756 442 302 12 7 421 10 443 2.47e-27 114
MS.gene92086.t1 MTR_6g038200 27.133 457 270 20 8 436 11 432 3.21e-27 114
MS.gene92086.t1 MTR_6g005600 28.902 346 187 11 123 436 124 442 3.91e-27 114
MS.gene92086.t1 MTR_7g013220 25.813 461 289 18 8 444 5 436 5.47e-27 113
MS.gene92086.t1 MTR_8g008990 28.025 471 265 19 7 434 5 444 7.14e-27 113
MS.gene92086.t1 MTR_7g117405 28.448 464 274 20 8 433 12 455 9.76e-27 112
MS.gene92086.t1 MTR_0184s0030 34.862 218 116 7 237 435 234 444 1.08e-26 112
MS.gene92086.t1 MTR_8g009073 27.887 459 277 19 7 434 5 440 2.24e-26 111
MS.gene92086.t1 MTR_8g027885 26.875 480 254 19 6 436 16 447 2.76e-26 111
MS.gene92086.t1 MTR_6g038230 26.522 460 277 20 8 440 11 436 3.77e-26 110
MS.gene92086.t1 MTR_8g012635 27.228 404 240 13 70 452 96 466 3.82e-26 110
MS.gene92086.t1 MTR_8g006270 28.723 282 169 7 167 435 178 440 4.22e-26 110
MS.gene92086.t1 MTR_8g027870 26.793 474 262 18 6 436 16 447 4.51e-26 110
MS.gene92086.t1 MTR_3g009510 32.258 217 128 4 236 436 241 454 4.81e-26 110
MS.gene92086.t1 MTR_6g033615 31.224 237 141 6 216 434 194 426 4.91e-26 110
MS.gene92086.t1 MTR_8g465670 27.254 477 258 20 9 434 8 446 5.11e-26 110
MS.gene92086.t1 MTR_8g006730 25.000 444 301 13 8 428 6 440 6.61e-26 110
MS.gene92086.t1 MTR_0078s0060 29.617 287 160 11 167 436 181 442 1.02e-25 109
MS.gene92086.t1 MTR_7g013200 26.281 449 279 17 8 438 5 419 1.20e-25 108
MS.gene92086.t1 MTR_4g485620 25.688 436 290 15 22 433 3 428 1.43e-25 109
MS.gene92086.t1 MTR_6g038220 25.885 452 281 17 8 436 11 431 1.44e-25 108
MS.gene92086.t1 MTR_0184s0040 34.536 194 113 5 253 436 269 458 2.55e-25 108
MS.gene92086.t1 MTR_0078s0190 34.536 194 113 5 253 436 269 458 2.55e-25 108
MS.gene92086.t1 MTR_7g013180 25.893 448 289 14 8 432 5 432 2.73e-25 108
MS.gene92086.t1 MTR_8g009073 32.743 226 134 6 223 434 90 311 2.93e-25 106
MS.gene92086.t1 MTR_6g033725 32.911 237 137 7 216 434 205 437 4.23e-25 107
MS.gene92086.t1 MTR_2g046820 34.783 230 136 6 236 454 236 462 4.89e-25 107
MS.gene92086.t1 MTR_4g485630 25.163 461 294 15 7 436 8 448 5.26e-25 107
MS.gene92086.t1 MTR_8g466240 27.040 429 252 20 1 398 1 399 5.41e-25 107
MS.gene92086.t1 MTR_7g070740 24.364 472 289 17 7 433 10 458 6.54e-25 107
MS.gene92086.t1 MTR_7g102550 27.312 465 283 19 8 432 9 458 7.53e-25 107
MS.gene92086.t1 MTR_8g012650 31.390 223 132 5 235 440 235 453 8.29e-25 107
MS.gene92086.t1 MTR_7g117170 37.705 183 98 5 257 427 266 444 8.48e-25 107
MS.gene92086.t1 MTR_8g006710 24.161 447 298 14 9 428 7 439 9.24e-25 106
MS.gene92086.t1 MTR_4g485590 26.650 409 242 13 8 394 9 381 1.09e-24 105
MS.gene92086.t1 MTR_1g107350 25.054 463 299 16 1 434 1 444 1.21e-24 106
MS.gene92086.t1 MTR_1g019510 27.851 456 280 20 7 434 5 439 1.42e-24 106
MS.gene92086.t1 MTR_5g035580 24.894 470 307 15 7 458 12 453 1.79e-24 105
MS.gene92086.t1 MTR_6g033625 27.312 465 270 20 9 434 5 440 1.89e-24 105
MS.gene92086.t1 MTR_8g012730 31.718 227 136 5 228 440 69 290 2.28e-24 103
MS.gene92086.t1 MTR_5g035560 25.877 456 272 17 7 434 10 427 4.38e-24 105
MS.gene92086.t1 MTR_7g070610 23.504 468 299 15 7 433 12 461 4.96e-24 105
MS.gene92086.t1 MTR_7g046490 32.331 266 148 10 183 435 194 440 7.89e-24 103
MS.gene92086.t1 MTR_8g009063 27.015 459 284 17 7 436 12 448 8.83e-24 103
MS.gene92086.t1 MTR_2g046750 34.783 230 136 6 236 454 239 465 1.04e-23 103
MS.gene92086.t1 MTR_8g006220 25.745 470 282 16 9 434 7 453 1.10e-23 103
MS.gene92086.t1 MTR_1g019520 34.392 189 109 4 257 434 4 188 2.35e-23 98.2
MS.gene92086.t1 MTR_7g055710 23.758 463 303 14 7 433 10 458 3.31e-23 102
MS.gene92086.t1 MTR_4g117980 24.508 457 290 17 6 424 9 448 6.64e-23 101
MS.gene92086.t1 MTR_0078s0010 34.375 192 112 5 253 434 254 441 7.32e-23 101
MS.gene92086.t1 MTR_6g038240 32.967 182 111 6 254 435 261 431 7.88e-23 100
MS.gene92086.t1 MTR_7g102460 25.800 469 283 18 7 428 8 458 8.94e-23 101
MS.gene92086.t1 MTR_2g034990 24.342 456 298 15 1 422 4 446 9.54e-23 100
MS.gene92086.t1 MTR_4g024020 25.435 460 299 15 7 428 8 461 1.05e-22 100
MS.gene92086.t1 MTR_1g107315 26.697 442 276 17 1 412 1 424 1.33e-22 100
MS.gene92086.t1 MTR_6g038300 24.784 464 281 18 8 440 11 437 1.41e-22 100
MS.gene92086.t1 MTR_8g009067 33.511 188 111 4 257 434 257 440 1.75e-22 100
MS.gene92086.t1 MTR_8g009067 33.511 188 111 4 257 434 139 322 1.75e-22 98.6
MS.gene92086.t1 MTR_7g013240 26.339 448 288 19 8 443 6 423 2.44e-22 99.4
MS.gene92086.t1 MTR_8g012630 32.323 198 116 5 257 440 204 397 2.45e-22 99.4
MS.gene92086.t1 MTR_8g074550 23.279 494 289 19 1 434 1 464 2.89e-22 99.8
MS.gene92086.t1 MTR_3g049970 26.350 463 289 19 3 434 4 445 3.56e-22 99.4
MS.gene92086.t1 MTR_8g077590 28.223 287 167 8 155 428 180 440 3.56e-22 99.4
MS.gene92086.t1 MTR_4g117950 24.944 445 285 14 6 422 4 427 3.87e-22 99.0
MS.gene92086.t1 MTR_8g006260 32.487 197 118 6 259 444 263 455 4.68e-22 99.0
MS.gene92086.t1 MTR_7g102560 24.847 491 284 17 1 436 1 461 5.51e-22 99.0
MS.gene92086.t1 MTR_2g040530 31.466 232 146 5 233 454 236 464 6.54e-22 98.2
MS.gene92086.t1 MTR_7g013260 25.059 423 286 16 8 420 6 407 7.26e-22 98.2
MS.gene92086.t1 MTR_5g090610 29.183 257 156 8 206 438 190 444 1.08e-21 97.8
MS.gene92086.t1 MTR_7g071040 22.581 465 311 12 5 433 14 465 1.11e-21 97.8
MS.gene92086.t1 MTR_3g069690 32.240 183 115 5 253 434 251 425 1.15e-21 97.4
MS.gene92086.t1 MTR_2g035020 24.416 471 303 17 1 436 4 456 1.20e-21 97.8
MS.gene92086.t1 MTR_8g088560 23.975 488 296 18 5 454 7 457 1.37e-21 97.4
MS.gene92086.t1 MTR_6g033675 32.020 203 130 5 236 434 242 440 1.70e-21 97.4
MS.gene92086.t1 MTR_0536s0010 25.503 447 279 17 6 422 19 441 1.90e-21 97.1
MS.gene92086.t1 MTR_5g098930 28.279 244 150 6 236 456 228 469 2.31e-21 96.7
MS.gene92086.t1 MTR_5g019580 31.325 249 143 8 232 456 257 501 2.40e-21 97.1
MS.gene92086.t1 MTR_5g019580 31.325 249 143 8 232 456 233 477 2.45e-21 97.1
MS.gene92086.t1 MTR_7g070910 22.629 464 312 13 5 433 8 459 2.63e-21 96.7
MS.gene92086.t1 MTR_7g047030 33.511 188 111 5 257 434 258 441 3.03e-21 96.3
MS.gene92086.t1 MTR_7g047270 33.511 188 111 5 257 434 258 441 3.03e-21 96.3
MS.gene92086.t1 MTR_0536s0020 24.183 459 278 15 7 424 17 446 4.21e-21 96.3
MS.gene92086.t1 MTR_8g083280 30.631 222 137 7 241 456 249 459 4.50e-21 95.9
MS.gene92086.t1 MTR_3g009490 35.329 167 92 4 283 436 3 166 5.78e-21 90.9
MS.gene92086.t1 MTR_6g033660 34.270 178 111 4 259 434 266 439 8.67e-21 95.1
MS.gene92086.t1 MTR_5g027210 26.199 271 163 6 212 450 212 477 9.74e-21 95.1
MS.gene92086.t1 MTR_7g070810 24.161 447 292 13 7 421 8 439 1.03e-20 95.1
MS.gene92086.t1 MTR_5g090660 29.646 226 136 6 234 438 233 456 1.09e-20 95.1
MS.gene92086.t1 MTR_5g090700 31.250 224 131 7 236 438 239 460 1.15e-20 94.7
MS.gene92086.t1 MTR_7g070940 22.444 450 316 13 7 433 8 447 1.28e-20 94.7
MS.gene92086.t1 MTR_4g128720 25.901 444 295 17 7 438 14 435 1.47e-20 94.4
MS.gene92086.t1 MTR_3g079480 24.512 461 285 21 8 428 21 458 1.55e-20 94.4
MS.gene92086.t1 MTR_7g102450 25.934 455 279 19 8 428 11 441 1.58e-20 94.4
MS.gene92086.t1 MTR_6g035185 22.718 471 301 15 1 429 4 453 1.65e-20 94.4
MS.gene92086.t1 MTR_7g102490 25.380 461 297 16 7 428 8 460 1.72e-20 94.4
MS.gene92086.t1 MTR_7g070800 22.199 473 299 14 5 433 3 450 1.88e-20 94.4
MS.gene92086.t1 MTR_5g090620 28.870 239 139 6 229 438 223 459 1.89e-20 94.0
MS.gene92086.t1 MTR_6g035265 22.961 466 301 15 6 434 9 453 2.72e-20 93.6
MS.gene92086.t1 MTR_8g083290 32.632 190 116 6 246 434 261 439 3.10e-20 93.2
MS.gene92086.t1 MTR_5g045960 25.482 467 290 19 7 432 8 457 4.02e-20 93.2
MS.gene92086.t1 MTR_4g082810 27.660 423 254 12 7 397 6 408 5.30e-20 92.0
MS.gene92086.t1 MTR_4g117890 25.270 463 282 19 7 432 12 447 8.28e-20 92.0
MS.gene92086.t1 MTR_7g102520 26.667 435 281 16 7 413 11 435 9.33e-20 92.0
MS.gene92086.t1 MTR_8g064880 24.889 450 272 17 5 412 6 431 1.07e-19 92.0
MS.gene92086.t1 MTR_1g107360 30.088 226 136 6 220 434 223 437 1.38e-19 91.3
MS.gene92086.t1 MTR_2g059240 24.299 428 269 14 2 397 8 412 1.51e-19 91.3
MS.gene92086.t1 MTR_8g012745 31.308 214 127 7 237 435 237 445 1.62e-19 91.3
MS.gene92086.t1 MTR_5g090630 31.050 219 128 8 241 438 233 449 1.85e-19 90.9
MS.gene92086.t1 MTR_4g094920 30.288 208 136 6 253 454 275 479 2.14e-19 90.9
MS.gene92086.t1 MTR_4g082820 26.389 432 273 13 7 406 6 424 2.20e-19 90.9
MS.gene92086.t1 MTR_7g070780 22.629 464 311 15 5 433 8 458 2.93e-19 90.5
MS.gene92086.t1 MTR_7g071050 23.517 472 285 17 7 455 12 430 3.06e-19 90.1
MS.gene92086.t1 MTR_8g064870 24.569 464 294 18 5 434 8 449 3.10e-19 90.5
MS.gene92086.t1 MTR_8g008970 28.030 264 159 6 184 434 195 440 3.11e-19 91.3
MS.gene92086.t1 MTR_8g008970 28.788 264 152 9 178 436 531 763 6.45e-17 84.0
MS.gene92086.t1 MTR_7g070930 22.316 475 314 14 1 433 1 462 5.99e-19 89.7
MS.gene92086.t1 MTR_5g098960 33.493 209 113 10 229 426 225 418 6.68e-19 89.4
MS.gene92086.t1 MTR_3g479520 24.356 505 304 23 1 454 1 478 6.77e-19 89.4
MS.gene92086.t1 MTR_4g095008 29.808 208 137 6 253 454 260 464 7.38e-19 89.7
MS.gene92086.t1 MTR_3g084520 27.397 219 130 7 241 436 238 450 9.60e-19 89.0
MS.gene92086.t1 MTR_1g032490 25.285 439 284 17 2 412 4 426 9.77e-19 89.0
MS.gene92086.t1 MTR_3g084540 28.272 191 125 4 253 436 266 451 1.01e-18 89.0
MS.gene92086.t1 MTR_5g090580 27.692 260 156 8 206 438 204 458 1.03e-18 89.0
MS.gene92086.t1 MTR_4g128690 33.708 178 105 5 257 434 264 428 1.04e-18 88.6
MS.gene92086.t1 MTR_4g485640 29.060 234 137 8 220 427 409 639 1.07e-18 89.4
MS.gene92086.t1 MTR_8g044140 23.000 400 232 12 64 416 37 407 1.36e-18 88.2
MS.gene92086.t1 MTR_7g080935 24.283 453 288 16 7 436 10 430 1.48e-18 88.2
MS.gene92086.t1 MTR_5g067170 31.522 184 111 4 253 422 262 444 1.58e-18 88.2
MS.gene92086.t1 MTR_0288s0020 24.895 474 263 18 8 429 10 442 1.79e-18 88.2
MS.gene92086.t1 MTR_5g070040 32.759 232 135 11 221 439 228 451 1.85e-18 87.8
MS.gene92086.t1 MTR_3g069710 30.493 223 138 8 220 434 214 427 2.30e-18 87.8
MS.gene92086.t1 MTR_3g084530 29.319 191 122 5 253 436 266 450 2.52e-18 87.4
MS.gene92086.t1 MTR_1g029540 22.566 452 297 17 13 440 19 441 2.55e-18 87.4
MS.gene92086.t1 MTR_4g117960 23.142 471 295 17 1 429 6 451 4.37e-18 87.0
MS.gene92086.t1 MTR_2g035040 30.412 194 116 5 257 436 173 361 4.55e-18 86.3
MS.gene92086.t1 MTR_7g080940 26.923 260 161 8 194 436 183 430 5.09e-18 86.7
MS.gene92086.t1 MTR_7g080950 31.217 189 117 7 253 441 253 428 5.09e-18 86.7
MS.gene92086.t1 MTR_5g029800 24.000 450 293 15 1 417 4 437 5.62e-18 86.7
MS.gene92086.t1 MTR_3g031450 25.532 235 143 6 220 439 213 430 6.54e-18 86.3
MS.gene92086.t1 MTR_5g090670 28.000 200 124 4 257 438 263 460 1.02e-17 85.9
MS.gene92086.t1 MTR_1g107375 29.130 230 133 8 220 434 215 429 1.19e-17 85.5
MS.gene92086.t1 MTR_8g032950 23.261 460 299 18 6 429 10 451 1.63e-17 85.1
MS.gene92086.t1 MTR_7g012120 23.799 458 295 15 1 422 9 448 2.14e-17 84.7
MS.gene92086.t1 MTR_1g107365 28.634 227 137 7 220 434 254 467 3.40e-17 84.3
MS.gene92086.t1 MTR_6g013900 32.022 178 107 6 253 428 283 448 3.49e-17 84.3
MS.gene92086.t1 MTR_8g090095 27.660 235 152 7 221 440 230 461 3.53e-17 84.0
MS.gene92086.t1 MTR_7g011470 28.400 250 145 9 201 434 206 437 4.22e-17 84.0
MS.gene92086.t1 MTR_3g479610 29.070 172 113 4 257 428 120 282 4.65e-17 82.4
MS.gene92086.t1 MTR_7g011470 28.400 250 145 9 201 434 210 441 4.73e-17 83.6
MS.gene92086.t1 MTR_4g008630 26.250 240 162 6 210 437 205 441 6.00e-17 83.2
MS.gene92086.t1 MTR_4g108250 21.581 468 314 12 7 436 10 462 6.53e-17 83.6
MS.gene92086.t1 MTR_0891s0010 28.655 171 113 4 257 427 97 258 7.21e-17 81.3
MS.gene92086.t1 MTR_5g016480 28.649 185 126 5 251 434 267 446 8.71e-17 82.8
MS.gene92086.t1 MTR_7g470610 33.125 160 102 4 253 409 128 285 1.70e-16 80.1
MS.gene92086.t1 MTR_7g070583 33.125 160 102 4 253 409 128 285 1.70e-16 80.1
MS.gene92086.t1 MTR_5g090600 25.725 276 174 9 199 458 193 453 1.88e-16 81.6
MS.gene92086.t1 MTR_6g014170 29.670 182 118 5 253 434 266 437 2.86e-16 81.3
MS.gene92086.t1 MTR_6g013990 25.506 247 156 9 201 434 222 453 2.91e-16 81.3
MS.gene92086.t1 MTR_5g040030 26.230 244 149 7 215 434 224 460 3.64e-16 81.3
MS.gene92086.t1 MTR_3g031400 24.569 232 147 6 220 440 215 429 6.51e-16 80.1
MS.gene92086.t1 MTR_1g107285 29.756 205 120 6 220 410 223 417 1.19e-15 79.3
MS.gene92086.t1 MTR_5g072820 24.583 240 157 6 210 439 202 427 1.30e-15 79.3
MS.gene92086.t1 MTR_6g013920 29.609 179 110 6 253 428 283 448 1.30e-15 79.3
MS.gene92086.t1 MTR_2g008210 31.250 176 112 6 253 427 278 445 1.35e-15 79.3
MS.gene92086.t1 MTR_5g070090 26.502 283 171 11 166 435 184 442 1.53e-15 79.0
MS.gene92086.t1 MTR_5g072840 23.195 457 287 17 8 439 10 427 1.61e-15 79.0
MS.gene92086.t1 MTR_7g070860 20.682 469 293 13 7 433 6 437 1.71e-15 79.0
MS.gene92086.t1 MTR_6g014220 29.213 178 116 5 257 434 286 453 1.74e-15 79.0
MS.gene92086.t1 MTR_5g004940 33.582 134 87 2 242 374 182 314 1.81e-15 78.6
MS.gene92086.t1 MTR_6g014020 28.270 237 140 10 210 428 229 453 2.28e-15 78.6
MS.gene92086.t1 MTR_3g479490 26.136 176 121 4 259 434 283 449 3.19e-15 78.2
MS.gene92086.t1 MTR_4g118000 23.326 463 297 17 6 435 10 447 3.34e-15 78.2
MS.gene92086.t1 MTR_8g059425 26.693 251 153 12 199 429 220 459 3.63e-15 77.8
MS.gene92086.t1 MTR_3g008010 29.834 181 111 7 257 434 286 453 3.75e-15 77.8
MS.gene92086.t1 MTR_5g072830 23.629 237 159 5 208 434 200 424 4.17e-15 77.4
MS.gene92086.t1 MTR_6g014200 28.571 182 120 5 253 434 281 452 4.21e-15 77.8
MS.gene92086.t1 MTR_6g011340 26.908 249 151 10 201 429 224 461 5.06e-15 77.4
MS.gene92086.t1 MTR_6g014250 28.889 180 114 6 257 434 286 453 6.94e-15 77.0
MS.gene92086.t1 MTR_4g064987 24.396 455 279 21 18 446 18 433 7.83e-15 76.6
MS.gene92086.t1 MTR_7g070870 29.878 164 104 4 218 371 225 387 8.08e-15 76.6
MS.gene92086.t1 MTR_8g056740 24.775 222 153 5 220 431 121 338 1.18e-14 75.9
MS.gene92086.t1 MTR_6g014310 26.104 249 152 10 201 434 225 456 1.29e-14 76.3
MS.gene92086.t1 MTR_5g039900 22.198 464 306 16 7 434 12 456 1.30e-14 76.3
MS.gene92086.t1 MTR_6g014190 28.017 232 137 10 219 434 45 262 1.47e-14 74.3
MS.gene92086.t1 MTR_8g007585 28.889 180 114 6 257 434 200 367 3.14e-14 74.7
MS.gene92086.t1 MTR_4g064987 24.078 461 279 21 18 446 18 439 4.93e-14 74.3
MS.gene92086.t1 MTR_6g013450 27.072 181 125 4 253 429 285 462 5.65e-14 74.3
MS.gene92086.t1 MTR_5g058320 28.409 176 116 5 253 428 269 434 5.91e-14 73.9
MS.gene92086.t1 MTR_6g014050 28.571 182 116 6 255 434 287 456 7.64e-14 73.9
MS.gene92086.t1 MTR_6g014187 23.617 470 292 21 8 434 10 455 1.07e-13 73.6
MS.gene92086.t1 MTR_6g014270 28.261 184 118 6 253 434 283 454 1.14e-13 73.2
MS.gene92086.t1 MTR_6g014240 26.923 182 123 5 253 434 251 422 1.21e-13 73.2
MS.gene92086.t1 MTR_6g014040 29.444 180 113 6 253 428 285 454 2.93e-13 72.0
MS.gene92086.t1 MTR_1g040310 21.696 401 233 14 64 416 75 442 5.16e-13 71.2
MS.gene92086.t1 MTR_6g014150 28.261 184 118 6 253 434 281 452 6.32e-13 70.9
MS.gene92086.t1 MTR_7g080900 30.058 173 111 5 257 429 264 426 8.98e-13 70.5
MS.gene92086.t1 MTR_7g039550 26.190 252 151 9 220 447 5 245 1.40e-12 68.2
MS.gene92086.t1 MTR_8g009840 27.064 218 137 4 261 458 314 529 2.30e-12 69.3
MS.gene92086.t1 MTR_2086s0010 26.846 149 100 4 279 427 1 140 3.95e-12 65.1
MS.gene92086.t1 MTR_1996s0010 26.846 149 100 4 279 427 1 140 3.95e-12 65.1
MS.gene92086.t1 MTR_6g013960 22.343 461 309 17 8 434 10 455 4.26e-12 68.6
MS.gene92086.t1 MTR_6g014290 26.667 180 118 6 257 434 286 453 4.40e-12 68.2
MS.gene92086.t1 MTR_6g078320 25.641 195 135 2 236 420 252 446 3.00e-11 65.9
MS.gene92086.t1 MTR_5g031860 29.286 140 93 4 257 395 280 414 3.19e-11 65.5
MS.gene92086.t1 MTR_0536s0030 31.343 134 79 4 309 432 194 324 4.96e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene92086.t1 AT5G53990 45.952 457 222 7 7 458 5 441 1.15e-144 421
MS.gene92086.t1 AT4G27570 44.615 455 234 7 8 458 7 447 2.97e-143 417
MS.gene92086.t1 AT5G54010 44.615 455 241 5 5 458 3 447 3.90e-143 417
MS.gene92086.t1 AT5G54060 45.435 460 242 6 5 458 10 466 1.97e-141 414
MS.gene92086.t1 AT4G27560 44.396 455 235 7 8 458 7 447 6.14e-141 412
MS.gene92086.t1 AT1G64920 44.858 457 231 7 7 458 5 445 8.05e-141 411
MS.gene92086.t1 AT2G22930 45.254 453 231 5 7 458 5 441 2.46e-139 407
MS.gene92086.t1 AT4G09500 44.812 453 233 6 7 458 5 441 8.62e-138 403
MS.gene92086.t1 AT1G64910 43.545 457 233 6 7 458 5 441 2.72e-135 397
MS.gene92086.t1 AT3G29630 43.640 456 233 6 5 454 3 440 3.10e-134 394
MS.gene92086.t1 AT3G29630 42.605 453 216 7 5 454 3 414 3.97e-126 373
MS.gene92086.t1 AT4G09500 42.478 452 220 6 7 458 5 416 3.60e-125 370
MS.gene92086.t1 AT1G50580 41.280 453 246 5 5 454 3 438 2.75e-123 366
MS.gene92086.t1 AT2G22590 34.047 467 275 17 7 454 14 466 4.59e-70 230
MS.gene92086.t1 AT5G49690 30.921 456 290 12 7 452 9 449 7.26e-65 216
MS.gene92086.t1 AT5G65550 30.085 472 299 17 1 454 1 459 9.09e-60 203
MS.gene92086.t1 AT2G22930 39.091 220 120 2 7 226 5 210 1.35e-50 174
MS.gene92086.t1 AT2G22930 36.190 105 62 3 357 458 187 289 1.71e-12 68.2
MS.gene92086.t1 AT5G12890 28.846 468 284 19 4 437 6 458 4.17e-37 142
MS.gene92086.t1 AT5G03490 25.951 447 289 12 6 435 17 438 1.41e-35 137
MS.gene92086.t1 AT4G36770 27.991 468 268 20 7 435 3 440 7.73e-35 135
MS.gene92086.t1 AT2G36770 28.913 460 281 19 6 428 12 462 7.32e-33 130
MS.gene92086.t1 AT1G73880 26.128 421 268 14 2 397 8 410 6.79e-32 127
MS.gene92086.t1 AT2G36750 29.130 460 277 18 6 429 8 454 2.94e-31 125
MS.gene92086.t1 AT2G36780 29.004 462 276 20 7 428 13 462 6.16e-31 125
MS.gene92086.t1 AT1G51210 26.818 440 281 14 8 433 20 432 1.21e-30 123
MS.gene92086.t1 AT2G36800 27.646 463 286 18 5 428 9 461 7.29e-30 122
MS.gene92086.t1 AT1G05675 27.556 450 276 17 8 434 6 428 2.31e-28 117
MS.gene92086.t1 AT2G16890 26.681 461 302 18 8 445 9 456 9.67e-28 115
MS.gene92086.t1 AT3G50740 25.652 460 293 15 8 435 7 449 1.56e-27 115
MS.gene92086.t1 AT2G15490 24.889 450 302 13 7 427 6 448 2.41e-27 114
MS.gene92086.t1 AT2G15490 24.945 453 301 14 7 427 6 451 2.78e-27 114
MS.gene92086.t1 AT2G18570 26.096 456 301 17 1 434 1 442 2.94e-27 114
MS.gene92086.t1 AT2G36760 27.897 466 278 18 6 428 12 462 3.24e-27 114
MS.gene92086.t1 AT2G31750 25.054 459 294 15 1 436 1 432 4.65e-27 113
MS.gene92086.t1 AT2G31750 25.054 459 294 15 1 436 1 432 7.13e-27 113
MS.gene92086.t1 AT2G15480 25.000 464 302 14 7 436 9 460 1.48e-26 112
MS.gene92086.t1 AT4G34135 24.891 458 280 15 7 428 10 439 5.02e-26 110
MS.gene92086.t1 AT2G15480 25.280 447 288 14 7 419 9 443 5.41e-26 110
MS.gene92086.t1 AT4G34131 25.527 474 288 18 2 434 4 453 6.32e-26 110
MS.gene92086.t1 AT1G10400 25.263 475 310 18 7 452 6 464 9.94e-26 109
MS.gene92086.t1 AT1G01420 26.371 474 263 18 8 434 11 445 1.93e-25 108
MS.gene92086.t1 AT1G01420 26.371 474 263 18 8 434 8 442 2.41e-25 108
MS.gene92086.t1 AT4G34138 25.100 498 302 17 5 458 8 478 4.60e-25 107
MS.gene92086.t1 AT2G31790 25.380 461 274 18 8 434 8 432 1.46e-24 106
MS.gene92086.t1 AT3G53150 26.004 473 298 18 7 436 21 484 1.97e-24 106
MS.gene92086.t1 AT2G16890 26.118 425 283 16 8 412 9 422 3.40e-24 104
MS.gene92086.t1 AT2G30140 24.786 468 301 18 8 454 13 450 5.37e-24 104
MS.gene92086.t1 AT4G01070 34.742 213 121 6 236 434 235 443 6.71e-24 104
MS.gene92086.t1 AT1G05680 25.778 450 284 17 8 434 6 428 7.76e-24 103
MS.gene92086.t1 AT2G18560 30.556 216 131 4 232 434 143 352 1.06e-23 102
MS.gene92086.t1 AT2G30140 24.684 474 299 19 8 456 13 453 2.11e-23 102
MS.gene92086.t1 AT5G66690 24.670 454 298 17 8 435 7 442 3.39e-23 102
MS.gene92086.t1 AT5G14860 24.691 486 323 18 1 454 1 475 3.62e-23 102
MS.gene92086.t1 AT3G53160 23.696 460 312 15 1 428 1 453 7.05e-23 101
MS.gene92086.t1 AT2G43820 24.364 472 286 17 8 449 7 437 1.43e-22 100
MS.gene92086.t1 AT2G30150 23.810 483 308 20 4 458 6 456 2.48e-22 99.8
MS.gene92086.t1 AT3G46670 25.850 441 288 19 2 427 3 419 4.04e-22 99.0
MS.gene92086.t1 AT2G36970 29.825 228 148 6 215 437 229 449 4.36e-22 99.0
MS.gene92086.t1 AT2G43840 32.632 190 118 4 259 448 257 436 7.36e-22 98.2
MS.gene92086.t1 AT2G43840 32.632 190 118 4 259 448 257 436 7.57e-22 98.2
MS.gene92086.t1 AT4G15280 31.064 235 141 5 241 456 275 507 7.70e-22 98.6
MS.gene92086.t1 AT4G15280 31.064 235 141 5 241 456 243 475 8.54e-22 98.2
MS.gene92086.t1 AT5G26310 24.009 454 301 16 8 435 7 442 1.35e-21 97.4
MS.gene92086.t1 AT1G07250 28.571 231 153 6 236 456 246 474 1.54e-21 97.4
MS.gene92086.t1 AT3G21560 24.190 463 297 16 4 434 8 448 2.21e-21 97.1
MS.gene92086.t1 AT4G15550 22.462 463 313 14 2 436 7 451 3.01e-21 96.7
MS.gene92086.t1 AT4G15260 30.085 236 143 6 241 456 123 356 5.04e-21 94.7
MS.gene92086.t1 AT2G29730 25.714 455 292 18 7 433 4 440 6.69e-21 95.5
MS.gene92086.t1 AT3G21760 32.292 192 112 5 257 432 269 458 7.57e-21 95.5
MS.gene92086.t1 AT2G30150 23.567 471 303 19 13 458 2 440 1.60e-20 94.0
MS.gene92086.t1 AT4G15480 29.386 228 143 8 219 434 233 454 1.61e-20 94.4
MS.gene92086.t1 AT2G36790 26.652 469 288 20 2 428 7 461 1.93e-20 94.4
MS.gene92086.t1 AT3G21800 30.698 215 130 4 257 454 263 475 2.18e-20 94.0
MS.gene92086.t1 AT3G21790 29.528 254 154 7 224 454 227 478 3.49e-20 93.6
MS.gene92086.t1 AT1G01390 34.694 196 111 5 248 428 248 441 3.99e-20 93.2
MS.gene92086.t1 AT1G01390 34.694 196 111 5 248 428 265 458 4.30e-20 93.2
MS.gene92086.t1 AT3G21750 28.216 241 151 5 236 456 232 470 4.34e-20 93.2
MS.gene92086.t1 AT5G59590 24.894 470 301 22 8 458 10 446 5.95e-20 92.4
MS.gene92086.t1 AT5G59580 25.376 465 303 19 8 454 9 447 7.53e-20 92.0
MS.gene92086.t1 AT1G07240 29.787 329 188 13 134 435 144 456 1.01e-19 92.0
MS.gene92086.t1 AT3G11340 24.215 446 283 17 9 434 10 420 1.15e-19 91.7
MS.gene92086.t1 AT4G15490 22.391 460 313 13 1 434 1 442 2.56e-19 90.9
MS.gene92086.t1 AT4G15500 32.778 180 111 6 257 434 267 438 2.80e-19 90.5
MS.gene92086.t1 AT5G05880 28.194 227 147 8 207 425 200 418 3.57e-19 90.1
MS.gene92086.t1 AT3G21780 30.093 216 133 5 257 456 257 470 3.92e-19 90.1
MS.gene92086.t1 AT5G05860 24.832 447 288 16 7 435 8 424 4.04e-19 90.1
MS.gene92086.t1 AT1G07260 29.258 229 150 6 236 454 245 471 6.44e-19 89.4
MS.gene92086.t1 AT1G24100 30.208 192 125 4 257 448 266 448 6.72e-19 89.4
MS.gene92086.t1 AT3G16520 29.767 215 138 5 236 446 242 447 1.00e-18 88.6
MS.gene92086.t1 AT5G05870 29.114 237 152 7 206 435 204 431 1.11e-18 88.6
MS.gene92086.t1 AT5G05890 27.984 243 160 8 199 434 196 430 2.11e-18 87.8
MS.gene92086.t1 AT3G16520 30.392 204 129 5 236 435 242 436 3.17e-18 87.0
MS.gene92086.t1 AT3G16520 30.392 204 129 5 236 435 242 436 3.31e-18 87.4
MS.gene92086.t1 AT5G38040 26.386 451 273 21 16 442 18 433 3.63e-18 87.0
MS.gene92086.t1 AT1G06000 23.301 412 244 12 8 394 10 374 4.04e-18 86.7
MS.gene92086.t1 AT2G29740 30.846 201 129 6 236 428 250 448 1.54e-17 85.1
MS.gene92086.t1 AT3G46660 24.390 451 308 18 2 440 8 437 1.76e-17 85.1
MS.gene92086.t1 AT3G55700 30.732 205 127 7 246 445 246 440 6.83e-17 83.2
MS.gene92086.t1 AT2G29710 31.351 185 110 6 257 433 265 440 6.96e-17 83.2
MS.gene92086.t1 AT3G22250 32.222 180 96 8 257 428 274 435 7.44e-17 83.2
MS.gene92086.t1 AT1G05560 28.700 223 138 7 241 448 275 491 9.42e-17 83.2
MS.gene92086.t1 AT1G05560 28.251 223 139 7 241 448 225 441 1.26e-16 82.4
MS.gene92086.t1 AT3G55710 35.000 140 86 4 259 396 263 399 1.65e-16 82.0
MS.gene92086.t1 AT1G05530 27.885 208 133 6 259 455 254 455 2.94e-16 81.3
MS.gene92086.t1 AT2G29750 30.978 184 121 5 249 428 267 448 3.29e-16 81.3
MS.gene92086.t1 AT4G14090 29.703 202 125 8 253 448 255 445 7.88e-16 80.1
MS.gene92086.t1 AT2G23260 28.492 179 120 5 257 435 260 430 9.44e-16 79.7
MS.gene92086.t1 AT2G23250 29.609 179 118 5 257 435 242 412 1.01e-15 79.3
MS.gene92086.t1 AT5G05900 23.932 468 296 20 1 436 1 440 1.91e-15 78.6
MS.gene92086.t1 AT1G78270 29.570 186 118 6 253 436 283 457 2.03e-15 79.0
MS.gene92086.t1 AT5G38010 24.946 461 287 19 8 442 10 437 3.79e-15 77.8
MS.gene92086.t1 AT1G22400 29.891 184 119 5 253 436 285 458 3.86e-15 77.8
MS.gene92086.t1 AT1G22360 29.348 184 120 5 253 436 281 454 4.64e-15 77.8
MS.gene92086.t1 AT3G46720 24.153 443 273 17 8 427 9 411 5.65e-15 77.4
MS.gene92086.t1 AT3G02100 23.454 469 283 19 8 440 13 441 5.69e-15 77.4
MS.gene92086.t1 AT5G17050 27.933 179 114 6 257 434 268 432 3.58e-14 74.7
MS.gene92086.t1 AT2G28080 26.415 212 144 6 213 416 227 434 4.41e-14 74.7
MS.gene92086.t1 AT2G26480 26.506 249 155 10 208 445 196 427 9.42e-14 73.6
MS.gene92086.t1 AT5G17030 26.087 230 150 8 210 433 215 430 1.78e-13 72.8
MS.gene92086.t1 AT1G22380 28.804 184 121 5 253 436 284 457 2.50e-13 72.4
MS.gene92086.t1 AT1G22340 27.222 180 122 4 257 436 288 458 2.98e-13 72.0
MS.gene92086.t1 AT1G22360 28.261 184 110 6 253 436 281 442 3.19e-12 68.9
MS.gene92086.t1 AT5G17040 26.111 180 120 5 257 436 251 417 7.73e-12 67.4
MS.gene92086.t1 AT5G17040 26.111 180 120 5 257 436 149 315 1.11e-11 66.2

Find 92 sgRNAs with CRISPR-Local

Find 109 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAAAACCTGTTCTGCTTTC+AGG 0.078488 2.4:-15852937 MS.gene92086:CDS
AGTGATGAGTTCAAAATTTA+TGG 0.097757 2.4:-15852491 MS.gene92086:CDS
AAAGGAAAAGGGATTGTTTA+TGG 0.177110 2.4:-15852667 MS.gene92086:CDS
TCCTCTAGTGTTGTATTTGT+TGG 0.233370 2.4:+15852898 None:intergenic
ATCACAGTTCCTCATGTTAA+TGG 0.256113 2.4:-15853447 MS.gene92086:CDS
TCAACTTTGGAAGCCAATAT+TGG 0.275061 2.4:+15853286 None:intergenic
AACTTCTTCTCAAGGAAATA+AGG 0.277035 2.4:-15853332 MS.gene92086:CDS
ATCCTTTCATTGAACCCTTC+AGG 0.299605 2.4:+15852691 None:intergenic
TTGCTTGGTCTTGAGTTAAC+AGG 0.300933 2.4:-15852775 MS.gene92086:CDS
AAAATGGATTTCATGGCTTA+AGG 0.310467 2.4:-15852875 MS.gene92086:CDS
CCAAGATAAGCTGTGGATAC+TGG 0.319952 2.4:+15853219 None:intergenic
AAAGGTTGCAATGAAATTGA+TGG 0.328357 2.4:-15852991 MS.gene92086:CDS
AAGGGATTGTTTATGGAAGT+TGG 0.335805 2.4:-15852660 MS.gene92086:CDS
GGGTTCAATGAAAGGATAAA+AGG 0.342906 2.4:-15852685 MS.gene92086:CDS
GGGACAAAGGTAATAAGATT+TGG 0.347167 2.4:+15853471 None:intergenic
TAAAACTTGATGCAAGAATC+AGG 0.354611 2.4:+15853126 None:intergenic
GTTCAATATCCTTCTCTGTT+TGG 0.364016 2.4:+15853352 None:intergenic
TTGTTGGAGAGGTGAAGATA+TGG 0.378348 2.4:+15853573 None:intergenic
GCAGCACTTAAGCCACCTAT+TGG 0.380205 2.4:-15852739 MS.gene92086:CDS
TTAACATGAGGAACTGTGAT+AGG 0.385255 2.4:+15853450 None:intergenic
GGCTTAAGTGCTGCAAGAAA+TGG 0.387827 2.4:+15852748 None:intergenic
AAATGGATTTCATGGCTTAA+GGG 0.393977 2.4:-15852874 MS.gene92086:CDS
GATCTCATGAAACCGCCTTC+AGG 0.396302 2.4:-15853153 MS.gene92086:CDS
ACCTCTTAATGCTAACTTGT+TGG 0.399917 2.4:+15853557 None:intergenic
TCAATTGACTCAAATCCAAT+AGG 0.400322 2.4:+15852724 None:intergenic
CCAGTATCCACAGCTTATCT+TGG 0.402654 2.4:-15853219 MS.gene92086:CDS
ATCCTTCTCTGTTTGGTCCA+TGG 0.404687 2.4:+15853359 None:intergenic
CAGTTTCAAGAGTTGTTGCT+TGG 0.416604 2.4:-15852790 MS.gene92086:CDS
AGTGTTGTATTTGTTGGCTC+AGG 0.421458 2.4:+15852904 None:intergenic
ATTCTAGAACATCCTTCTGT+TGG 0.422732 2.4:-15852622 MS.gene92086:CDS
ATGAGGTTGGAAAAGAAGTA+AGG 0.423482 2.4:-15852378 MS.gene92086:CDS
AATAAGAGGGACTAAAGAAA+AGG 0.434353 2.4:+15853389 None:intergenic
AATGAAAGGATAAAAGGAAA+AGG 0.439943 2.4:-15852679 MS.gene92086:CDS
ACAACCTCTGCAGATGCAAT+TGG 0.447132 2.4:-15853018 MS.gene92086:CDS
AATGTTTCCATGGTTTGCTA+TGG 0.456397 2.4:-15853607 MS.gene92086:CDS
TCCATGGCTGTAGCAATAAG+AGG 0.461979 2.4:+15853375 None:intergenic
ATGAAAGGATAAAAGGAAAA+GGG 0.462020 2.4:-15852678 MS.gene92086:CDS
TTGAAGAAGCTTTACCTGAA+GGG 0.470265 2.4:-15852705 MS.gene92086:CDS
CTGGTGTTGTTGCCACGTCT+TGG 0.470989 2.4:-15852538 MS.gene92086:CDS
ACAGGACCTGAAAGCAGAAC+AGG 0.471617 2.4:+15852931 None:intergenic
CTGGAGTCAATATAATGTAT+TGG 0.483981 2.4:+15853238 None:intergenic
TCCAACAAGTTAGCATTAAG+AGG 0.486768 2.4:-15853558 MS.gene92086:CDS
GTTGAGAAAGGTGATGAAGA+TGG 0.486792 2.4:-15852457 MS.gene92086:CDS
AAATCAAAGAAAACTATTTG+TGG 0.487198 2.4:+15853309 None:intergenic
ATGGATGATGAGAATGAGGT+TGG 0.487478 2.4:-15852391 MS.gene92086:CDS
AAAATTTCCTTGTTGAAGCT+AGG 0.487842 2.4:+15853085 None:intergenic
TACCTGAAGGGTTCAATGAA+AGG 0.490078 2.4:-15852693 MS.gene92086:CDS
GCAGATGCAATTGGTTTCAA+AGG 0.495490 2.4:-15853009 MS.gene92086:CDS
ATGTTTCCATGGTTTGCTAT+GGG 0.504571 2.4:-15853606 MS.gene92086:CDS
GGAAACATTGCTATGTGTAA+AGG 0.506531 2.4:+15853621 None:intergenic
TACACATAGCAATGTTTCCA+TGG 0.507754 2.4:-15853617 MS.gene92086:CDS
TGTTGGAGAGGTGAAGATAT+GGG 0.518669 2.4:+15853574 None:intergenic
TTCAAAATTTATGGTTGGTG+TGG 0.519370 2.4:-15852482 MS.gene92086:CDS
TTATTTGATCGTTTGCACAT+AGG 0.524916 2.4:-15853042 MS.gene92086:CDS
GGATATTGAACTTCTTCTCA+AGG 0.527735 2.4:-15853340 MS.gene92086:CDS
CCCTCTTATTGCTACAGCCA+TGG 0.534700 2.4:-15853376 MS.gene92086:CDS
ATAAGAGGGACTAAAGAAAA+GGG 0.535599 2.4:+15853390 None:intergenic
ATTGAAGAAGCTTTACCTGA+AGG 0.539878 2.4:-15852706 MS.gene92086:CDS
TAAAGGAGAAGGAGCATCCA+TGG 0.554316 2.4:+15853638 None:intergenic
TTGAGAAAGGTGATGAAGAT+GGG 0.554445 2.4:-15852456 MS.gene92086:CDS
TGGAGCTGCTTCTATTACTG+AGG 0.555465 2.4:-15852581 MS.gene92086:CDS
TGAGGTTGGAAAAGAAGTAA+GGG 0.563327 2.4:-15852377 MS.gene92086:CDS
ACTTGTTAACACGTGTCAGC+TGG 0.567449 2.4:-15852557 MS.gene92086:CDS
ATGAGTTCAAAATTTATGGT+TGG 0.568022 2.4:-15852487 MS.gene92086:CDS
ATTGCTATGTGTAAAGGAGA+AGG 0.577456 2.4:+15853627 None:intergenic
TAACATGAGGAACTGTGATA+GGG 0.579312 2.4:+15853451 None:intergenic
ATGTTTCTGCATCATGTGGA+AGG 0.581236 2.4:+15853424 None:intergenic
GAAACCAATTGCATCTGCAG+AGG 0.585035 2.4:+15853014 None:intergenic
TCTTGCATTCATGATATGAT+CGG 0.585265 2.4:+15852513 None:intergenic
TGTGATGGATGATGAGAATG+AGG 0.586203 2.4:-15852395 MS.gene92086:CDS
ATTGACTCAAATCCAATAGG+TGG 0.595901 2.4:+15852727 None:intergenic
TTAATGCTAACTTGTTGGAG+AGG 0.601672 2.4:+15853562 None:intergenic
GGAGCTGCTTCTATTACTGA+GGG 0.605900 2.4:-15852580 MS.gene92086:CDS
GTTTCAATATAATCAACATA+CGG 0.611681 2.4:+15852967 None:intergenic
TAAACATCCAAGATAAGCTG+TGG 0.613726 2.4:+15853212 None:intergenic
GAAGATGTTTCTGCATCATG+TGG 0.620712 2.4:+15853420 None:intergenic
AGGAACTGTGATAGGGACAA+AGG 0.624768 2.4:+15853458 None:intergenic
TTCGATTCCTAGCTTCAACA+AGG 0.628026 2.4:-15853092 MS.gene92086:CDS
GTAATGAAACATCCAACAGA+AGG 0.629473 2.4:+15852610 None:intergenic
CAAGAATCAGGAAAACCTGA+AGG 0.629744 2.4:+15853138 None:intergenic
CCATGGCTGTAGCAATAAGA+GGG 0.636758 2.4:+15853376 None:intergenic
GTTGGTGTGGAAGTTGAGAA+AGG 0.637430 2.4:-15852469 MS.gene92086:CDS
AAGTGTCCCATAGCAAACCA+TGG 0.639716 2.4:+15853600 None:intergenic
GCCAACAAATACAACACTAG+AGG 0.646740 2.4:-15852899 MS.gene92086:CDS
AGCCATGGACCAAACAGAGA+AGG 0.647882 2.4:-15853361 MS.gene92086:CDS
TTTGTTGGCTCAGGTAACAC+AGG 0.651671 2.4:+15852913 None:intergenic
CAAAGCTGTGAAGATTGTGA+TGG 0.655994 2.4:-15852410 MS.gene92086:CDS
GTTGGAGAGGTGAAGATATG+GGG 0.667052 2.4:+15853575 None:intergenic
TGTGGAAGGCCATTAACATG+AGG 0.687192 2.4:+15853438 None:intergenic
ATATGATCGGAACCAAGACG+TGG 0.688479 2.4:+15852526 None:intergenic
GAATCAGGAAAACCTGAAGG+CGG 0.697656 2.4:+15853141 None:intergenic
GGATGTTTCATTACACACTG+TGG 0.709910 2.4:-15852601 MS.gene92086:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATCAAAGAAAACTATTTG+TGG + chr2.4:15852612-15852631 None:intergenic 20.0%
!! GTTTCAATATAATCAACATA+CGG + chr2.4:15852954-15852973 None:intergenic 20.0%
!!! CAATAAAAAGTTTCTCATTT+TGG + chr2.4:15853576-15853595 None:intergenic 20.0%
!!! GATTATATTGAAACAGTTTT+TGG - chr2.4:15852960-15852979 MS.gene92086:CDS 20.0%
!!! TCAACAAGGAAATTTTTATT+TGG - chr2.4:15852840-15852859 MS.gene92086:CDS 20.0%
!!! TTTTCTTTGATTTCCAATAT+TGG - chr2.4:15852619-15852638 MS.gene92086:CDS 20.0%
! AATGAAAGGATAAAAGGAAA+AGG - chr2.4:15853239-15853258 MS.gene92086:CDS 25.0%
! AGTGATGAGTTCAAAATTTA+TGG - chr2.4:15853427-15853446 MS.gene92086:CDS 25.0%
! ATGAAAGGATAAAAGGAAAA+GGG - chr2.4:15853240-15853259 MS.gene92086:CDS 25.0%
! ATGAGTTCAAAATTTATGGT+TGG - chr2.4:15853431-15853450 MS.gene92086:CDS 25.0%
! GTTTACAAAAACTAAGTCTA+GGG - chr2.4:15852724-15852743 MS.gene92086:CDS 25.0%
! TGTTTACAAAAACTAAGTCT+AGG - chr2.4:15852723-15852742 MS.gene92086:CDS 25.0%
!!! AACTTGTTGAGTGTATTTTT+AGG + chr2.4:15852408-15852427 None:intergenic 25.0%
!!! AGGAAATTTTTATTTGGAAG+TGG - chr2.4:15852846-15852865 MS.gene92086:CDS 25.0%
!!! TGAAACTGATTTTGTTCTAA+TGG + chr2.4:15853116-15853135 None:intergenic 25.0%
AAAATTTCCTTGTTGAAGCT+AGG + chr2.4:15852836-15852855 None:intergenic 30.0%
AAAGGAAAAGGGATTGTTTA+TGG - chr2.4:15853251-15853270 MS.gene92086:CDS 30.0%
AAAGGTTGCAATGAAATTGA+TGG - chr2.4:15852927-15852946 MS.gene92086:CDS 30.0%
AACTTCTTCTCAAGGAAATA+AGG - chr2.4:15852586-15852605 MS.gene92086:CDS 30.0%
AATAAGAGGGACTAAAGAAA+AGG + chr2.4:15852532-15852551 None:intergenic 30.0%
ATAAGAGGGACTAAAGAAAA+GGG + chr2.4:15852531-15852550 None:intergenic 30.0%
ATACAACACTAGAGGAAAAA+TGG - chr2.4:15853027-15853046 MS.gene92086:CDS 30.0%
CTGGAGTCAATATAATGTAT+TGG + chr2.4:15852683-15852702 None:intergenic 30.0%
TAAAACTTGATGCAAGAATC+AGG + chr2.4:15852795-15852814 None:intergenic 30.0%
TCTTGCATTCATGATATGAT+CGG + chr2.4:15853408-15853427 None:intergenic 30.0%
TTATTTGATCGTTTGCACAT+AGG - chr2.4:15852876-15852895 MS.gene92086:CDS 30.0%
! AAAATGGATTTCATGGCTTA+AGG - chr2.4:15853043-15853062 MS.gene92086:CDS 30.0%
! AAATGGATTTCATGGCTTAA+GGG - chr2.4:15853044-15853063 MS.gene92086:CDS 30.0%
! TAGAGGAAAAATGGATTTCA+TGG - chr2.4:15853036-15853055 MS.gene92086:CDS 30.0%
! TCAATTGACTCAAATCCAAT+AGG + chr2.4:15853197-15853216 None:intergenic 30.0%
! TTCAAAATTTATGGTTGGTG+TGG - chr2.4:15853436-15853455 MS.gene92086:CDS 30.0%
AAGGGATTGTTTATGGAAGT+TGG - chr2.4:15853258-15853277 MS.gene92086:CDS 35.0%
ATCACAGTTCCTCATGTTAA+TGG - chr2.4:15852471-15852490 MS.gene92086:CDS 35.0%
ATGAGGTTGGAAAAGAAGTA+AGG - chr2.4:15853540-15853559 MS.gene92086:CDS 35.0%
ATTGAAGAAGCTTTACCTGA+AGG - chr2.4:15853212-15853231 MS.gene92086:CDS 35.0%
ATTGCTATGTGTAAAGGAGA+AGG + chr2.4:15852294-15852313 None:intergenic 35.0%
CCAAAGTTGACTAAAAACCT+TGG - chr2.4:15852645-15852664 MS.gene92086:CDS 35.0%
GGAAACATTGCTATGTGTAA+AGG + chr2.4:15852300-15852319 None:intergenic 35.0%
GGATATTGAACTTCTTCTCA+AGG - chr2.4:15852578-15852597 MS.gene92086:CDS 35.0%
GGGACAAAGGTAATAAGATT+TGG + chr2.4:15852450-15852469 None:intergenic 35.0%
GGGTTCAATGAAAGGATAAA+AGG - chr2.4:15853233-15853252 MS.gene92086:CDS 35.0%
GTAATGAAACATCCAACAGA+AGG + chr2.4:15853311-15853330 None:intergenic 35.0%
GTTCAATATCCTTCTCTGTT+TGG + chr2.4:15852569-15852588 None:intergenic 35.0%
TAAACATCCAAGATAAGCTG+TGG + chr2.4:15852709-15852728 None:intergenic 35.0%
TAACATGAGGAACTGTGATA+GGG + chr2.4:15852470-15852489 None:intergenic 35.0%
TACACATAGCAATGTTTCCA+TGG - chr2.4:15852301-15852320 MS.gene92086:CDS 35.0%
TCCAACAAGTTAGCATTAAG+AGG - chr2.4:15852360-15852379 MS.gene92086:CDS 35.0%
TCCTCTAGTGTTGTATTTGT+TGG + chr2.4:15853023-15853042 None:intergenic 35.0%
TGAGGTTGGAAAAGAAGTAA+GGG - chr2.4:15853541-15853560 MS.gene92086:CDS 35.0%
TGGCTTAAGGGATTCAAAAA+TGG - chr2.4:15853056-15853075 MS.gene92086:CDS 35.0%
TTAACATGAGGAACTGTGAT+AGG + chr2.4:15852471-15852490 None:intergenic 35.0%
TTGAAGAAGCTTTACCTGAA+GGG - chr2.4:15853213-15853232 MS.gene92086:CDS 35.0%
TTGAGAAAGGTGATGAAGAT+GGG - chr2.4:15853462-15853481 MS.gene92086:CDS 35.0%
! ACCTCTTAATGCTAACTTGT+TGG + chr2.4:15852364-15852383 None:intergenic 35.0%
! ATTGACTCAAATCCAATAGG+TGG + chr2.4:15853194-15853213 None:intergenic 35.0%
! TCAACTTTGGAAGCCAATAT+TGG + chr2.4:15852635-15852654 None:intergenic 35.0%
! TTTTGTGCATATGGAAGTGA+AGG - chr2.4:15853089-15853108 MS.gene92086:CDS 35.0%
!! AATGTTTCCATGGTTTGCTA+TGG - chr2.4:15852311-15852330 MS.gene92086:CDS 35.0%
!! ATGTTTCCATGGTTTGCTAT+GGG - chr2.4:15852312-15852331 MS.gene92086:CDS 35.0%
!! ATTCTAGAACATCCTTCTGT+TGG - chr2.4:15853296-15853315 MS.gene92086:CDS 35.0%
!! TTAATGCTAACTTGTTGGAG+AGG + chr2.4:15852359-15852378 None:intergenic 35.0%
!!! CCAAGGTTTTTAGTCAACTT+TGG + chr2.4:15852648-15852667 None:intergenic 35.0%
!!! TCTGTGGTTTTTTGTGCATA+TGG - chr2.4:15853080-15853099 MS.gene92086:CDS 35.0%
ATCCTTTCATTGAACCCTTC+AGG + chr2.4:15853230-15853249 None:intergenic 40.0%
ATGGATGATGAGAATGAGGT+TGG - chr2.4:15853527-15853546 MS.gene92086:CDS 40.0%
CAAAGCTGTGAAGATTGTGA+TGG - chr2.4:15853508-15853527 MS.gene92086:CDS 40.0%
CAAGAATCAGGAAAACCTGA+AGG + chr2.4:15852783-15852802 None:intergenic 40.0%
CAGTTTCAAGAGTTGTTGCT+TGG - chr2.4:15853128-15853147 MS.gene92086:CDS 40.0%
GCCAACAAATACAACACTAG+AGG - chr2.4:15853019-15853038 MS.gene92086:CDS 40.0%
GGATGTTTCATTACACACTG+TGG - chr2.4:15853317-15853336 MS.gene92086:CDS 40.0%
GTTGAGAAAGGTGATGAAGA+TGG - chr2.4:15853461-15853480 MS.gene92086:CDS 40.0%
TACCTGAAGGGTTCAATGAA+AGG - chr2.4:15853225-15853244 MS.gene92086:CDS 40.0%
TGTTGGAGAGGTGAAGATAT+GGG + chr2.4:15852347-15852366 None:intergenic 40.0%
TTCGATTCCTAGCTTCAACA+AGG - chr2.4:15852826-15852845 MS.gene92086:CDS 40.0%
TTGTTGGAGAGGTGAAGATA+TGG + chr2.4:15852348-15852367 None:intergenic 40.0%
! ATGTTTCTGCATCATGTGGA+AGG + chr2.4:15852497-15852516 None:intergenic 40.0%
! ATTGGAGACTTTTGATGCCA+AGG + chr2.4:15852665-15852684 None:intergenic 40.0%
! GAAGATGTTTCTGCATCATG+TGG + chr2.4:15852501-15852520 None:intergenic 40.0%
! GCAGATGCAATTGGTTTCAA+AGG - chr2.4:15852909-15852928 MS.gene92086:CDS 40.0%
! GGGATTCAAAAATGGTTCTG+TGG - chr2.4:15853064-15853083 MS.gene92086:CDS 40.0%
!! AGTGTTGTATTTGTTGGCTC+AGG + chr2.4:15853017-15853036 None:intergenic 40.0%
!! TGTGATGGATGATGAGAATG+AGG - chr2.4:15853523-15853542 MS.gene92086:CDS 40.0%
!! TTGCTTGGTCTTGAGTTAAC+AGG - chr2.4:15853143-15853162 MS.gene92086:CDS 40.0%
AAGTGTCCCATAGCAAACCA+TGG + chr2.4:15852321-15852340 None:intergenic 45.0%
ACAACCTCTGCAGATGCAAT+TGG - chr2.4:15852900-15852919 MS.gene92086:CDS 45.0%
AGGAACTGTGATAGGGACAA+AGG + chr2.4:15852463-15852482 None:intergenic 45.0%
ATATGATCGGAACCAAGACG+TGG + chr2.4:15853395-15853414 None:intergenic 45.0%
ATCCTTCTCTGTTTGGTCCA+TGG + chr2.4:15852562-15852581 None:intergenic 45.0%
CCAAGATAAGCTGTGGATAC+TGG + chr2.4:15852702-15852721 None:intergenic 45.0%
CCAGTATCCACAGCTTATCT+TGG - chr2.4:15852699-15852718 MS.gene92086:CDS 45.0%
CCATGGCTGTAGCAATAAGA+GGG + chr2.4:15852545-15852564 None:intergenic 45.0%
GAAACCAATTGCATCTGCAG+AGG + chr2.4:15852907-15852926 None:intergenic 45.0%
GAATCAGGAAAACCTGAAGG+CGG + chr2.4:15852780-15852799 None:intergenic 45.0%
GGAAAACCTGTTCTGCTTTC+AGG - chr2.4:15852981-15853000 MS.gene92086:CDS 45.0%
GGAGCTGCTTCTATTACTGA+GGG - chr2.4:15853338-15853357 MS.gene92086:CDS 45.0%
GTTGGAGAGGTGAAGATATG+GGG + chr2.4:15852346-15852365 None:intergenic 45.0%
GTTGGTGTGGAAGTTGAGAA+AGG - chr2.4:15853449-15853468 MS.gene92086:CDS 45.0%
TCCATGGCTGTAGCAATAAG+AGG + chr2.4:15852546-15852565 None:intergenic 45.0%
TGGAGCTGCTTCTATTACTG+AGG - chr2.4:15853337-15853356 MS.gene92086:CDS 45.0%
TGTGGAAGGCCATTAACATG+AGG + chr2.4:15852483-15852502 None:intergenic 45.0%
! ACTTGTTAACACGTGTCAGC+TGG - chr2.4:15853361-15853380 MS.gene92086:CDS 45.0%
! GGCTTAAGTGCTGCAAGAAA+TGG + chr2.4:15853173-15853192 None:intergenic 45.0%
!! TTTGTTGGCTCAGGTAACAC+AGG + chr2.4:15853008-15853027 None:intergenic 45.0%
ACAGGACCTGAAAGCAGAAC+AGG + chr2.4:15852990-15853009 None:intergenic 50.0%
AGCCATGGACCAAACAGAGA+AGG - chr2.4:15852557-15852576 MS.gene92086:CDS 50.0%
CCCTCTTATTGCTACAGCCA+TGG - chr2.4:15852542-15852561 MS.gene92086:CDS 50.0%
GATCTCATGAAACCGCCTTC+AGG - chr2.4:15852765-15852784 MS.gene92086:CDS 50.0%
GCAGCACTTAAGCCACCTAT+TGG - chr2.4:15853179-15853198 MS.gene92086:CDS 50.0%
!! CTGGTGTTGTTGCCACGTCT+TGG - chr2.4:15853380-15853399 MS.gene92086:CDS 55.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 15852282 15853658 15852282 ID=MS.gene92086
chr2.4 mRNA 15852282 15853658 15852282 ID=MS.gene92086.t1;Parent=MS.gene92086
chr2.4 exon 15852282 15853658 15852282 ID=MS.gene92086.t1.exon1;Parent=MS.gene92086.t1
chr2.4 CDS 15852282 15853658 15852282 ID=cds.MS.gene92086.t1;Parent=MS.gene92086.t1
Gene Sequence

>MS.gene92086

ATGGATGCTCCTTCTCCTTTACACATAGCAATGTTTCCATGGTTTGCTATGGGACACTTCACCCCATATCTTCACCTCTCCAACAAGTTAGCATTAAGAGGTCACAAAATATCATTCTTCATACCTAAAAATACACTCAACAAGTTACAACATCTCAATCTTCATCCAAATCTTATTACCTTTGTCCCTATCACAGTTCCTCATGTTAATGGCCTTCCACATGATGCAGAAACATCTTCTGATGTACCCTTTTCTTTAGTCCCTCTTATTGCTACAGCCATGGACCAAACAGAGAAGGATATTGAACTTCTTCTCAAGGAAATAAGGCCACAAATAGTTTTCTTTGATTTCCAATATTGGCTTCCAAAGTTGACTAAAAACCTTGGCATCAAAAGTCTCCAATACATTATATTGACTCCAGTATCCACAGCTTATCTTGGATGTTTACAAAAACTAAGTCTAGGGAAAGATTTAACTGAAGTTGATCTCATGAAACCGCCTTCAGGTTTTCCTGATTCTTGCATCAAGTTTTATAAACACGAACTTCGATTCCTAGCTTCAACAAGGAAATTTTTATTTGGAAGTGGTGTTTTTTTATTTGATCGTTTGCACATAGGTACAACCTCTGCAGATGCAATTGGTTTCAAAGGTTGCAATGAAATTGATGGACCGTATGTTGATTATATTGAAACAGTTTTTGGAAAACCTGTTCTGCTTTCAGGTCCTGTGTTACCTGAGCCAACAAATACAACACTAGAGGAAAAATGGATTTCATGGCTTAAGGGATTCAAAAATGGTTCTGTGGTTTTTTGTGCATATGGAAGTGAAGGTCCATTAGAACAAAATCAGTTTCAAGAGTTGTTGCTTGGTCTTGAGTTAACAGGTTTTCCATTTCTTGCAGCACTTAAGCCACCTATTGGATTTGAGTCAATTGAAGAAGCTTTACCTGAAGGGTTCAATGAAAGGATAAAAGGAAAAGGGATTGTTTATGGAAGTTGGATTCAACAACAGTTGATTCTAGAACATCCTTCTGTTGGATGTTTCATTACACACTGTGGAGCTGCTTCTATTACTGAGGGACTTGTTAACACGTGTCAGCTGGTGTTGTTGCCACGTCTTGGTTCCGATCATATCATGAATGCAAGAGTGATGAGTTCAAAATTTATGGTTGGTGTGGAAGTTGAGAAAGGTGATGAAGATGGGTTGTTTACAAAAGAAAGTGTGTGCAAAGCTGTGAAGATTGTGATGGATGATGAGAATGAGGTTGGAAAAGAAGTAAGGGAAAATCATGCCAAAATGAGAAACTTTTTATTGTGCAGCAATTTAGAATCTTCATGTGTTGATAGTTTCTGTCAAAAACTTTATGATTTGCTCTAG
Protein sequence

>MS.gene92086.t1

MDAPSPLHIAMFPWFAMGHFTPYLHLSNKLALRGHKISFFIPKNTLNKLQHLNLHPNLITFVPITVPHVNGLPHDAETSSDVPFSLVPLIATAMDQTEKDIELLLKEIRPQIVFFDFQYWLPKLTKNLGIKSLQYIILTPVSTAYLGCLQKLSLGKDLTEVDLMKPPSGFPDSCIKFYKHELRFLASTRKFLFGSGVFLFDRLHIGTTSADAIGFKGCNEIDGPYVDYIETVFGKPVLLSGPVLPEPTNTTLEEKWISWLKGFKNGSVVFCAYGSEGPLEQNQFQELLLGLELTGFPFLAALKPPIGFESIEEALPEGFNERIKGKGIVYGSWIQQQLILEHPSVGCFITHCGAASITEGLVNTCQLVLLPRLGSDHIMNARVMSSKFMVGVEVEKGDEDGLFTKESVCKAVKIVMDDENEVGKEVRENHAKMRNFLLCSNLESSCVDSFCQKLYDLL