AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene006658


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene006658.t1 MTR_4g079250 95.639 321 14 0 1 321 142 462 0.0 643
MS.gene006658.t1 MTR_4g079270 87.539 321 40 0 1 321 142 462 0.0 596
MS.gene006658.t1 MTR_2g083490 63.208 318 113 3 2 317 143 458 2.05e-140 405
MS.gene006658.t1 MTR_2g083380 61.950 318 117 3 2 317 160 475 1.37e-136 396
MS.gene006658.t1 MTR_2g083480 61.812 309 114 3 10 316 151 457 1.95e-133 387
MS.gene006658.t1 MTR_2g083430 60.063 318 123 3 2 317 143 458 1.83e-131 382
MS.gene006658.t1 MTR_2g014900 55.346 318 139 2 2 318 142 457 7.14e-129 375
MS.gene006658.t1 MTR_2g083390 58.710 310 100 4 10 317 151 434 2.55e-126 368
MS.gene006658.t1 MTR_2g083420 57.097 310 105 4 10 317 151 434 1.99e-122 358
MS.gene006658.t1 MTR_1g090270 42.547 322 174 7 3 316 146 464 2.53e-83 259
MS.gene006658.t1 MTR_4g059370 42.308 312 167 6 12 317 88 392 6.21e-83 256
MS.gene006658.t1 MTR_2g086283 49.416 257 76 4 64 319 135 338 2.82e-78 242
MS.gene006658.t1 MTR_2g083360 41.748 309 73 7 10 317 172 374 5.63e-68 217
MS.gene006658.t1 MTR_1g090280 45.604 182 94 3 140 316 133 314 4.34e-49 166
MS.gene006658.t1 MTR_4g123553 35.974 303 180 8 21 315 163 459 1.15e-47 166
MS.gene006658.t1 MTR_6g042310 35.758 330 181 11 4 315 146 462 2.11e-47 166
MS.gene006658.t1 MTR_2g008220 34.906 318 183 11 8 313 156 461 6.06e-43 154
MS.gene006658.t1 MTR_2g008226 36.093 302 176 10 21 314 175 467 2.70e-42 152
MS.gene006658.t1 MTR_2g008225 37.452 259 143 7 65 313 213 462 5.23e-42 151
MS.gene006658.t1 MTR_4g079280 77.108 83 19 0 16 98 102 184 1.94e-41 142
MS.gene006658.t1 MTR_2g046620 33.882 304 184 9 21 315 165 460 2.92e-41 149
MS.gene006658.t1 MTR_4g077960 33.550 307 183 9 20 315 140 436 7.70e-40 145
MS.gene006658.t1 MTR_6g036650 36.905 252 138 8 75 315 228 469 5.31e-38 140
MS.gene006658.t1 MTR_7g067330 35.036 274 156 9 47 314 169 426 1.24e-37 139
MS.gene006658.t1 MTR_8g071070 31.660 259 169 4 66 316 213 471 1.81e-36 137
MS.gene006658.t1 MTR_8g068330 31.475 305 191 8 27 319 168 466 1.53e-35 134
MS.gene006658.t1 MTR_8g068360 33.829 269 157 8 61 318 210 468 1.89e-35 134
MS.gene006658.t1 MTR_7g067120 35.743 249 138 9 69 310 189 422 2.29e-35 133
MS.gene006658.t1 MTR_2g083440 53.982 113 42 3 207 317 8 112 2.30e-33 119
MS.gene006658.t1 MTR_5g066410 31.973 294 182 5 40 319 155 444 1.46e-32 125
MS.gene006658.t1 MTR_8g007565 30.945 307 198 5 23 319 166 468 1.70e-32 125
MS.gene006658.t1 MTR_8g007650 30.945 307 198 5 23 319 166 468 2.70e-32 125
MS.gene006658.t1 MTR_3g435310 39.594 197 112 5 120 315 228 418 4.77e-32 124
MS.gene006658.t1 MTR_4g024020 35.498 231 128 7 108 321 266 492 1.32e-31 124
MS.gene006658.t1 MTR_5g045970 32.526 289 161 11 61 320 213 496 2.40e-31 123
MS.gene006658.t1 MTR_8g068340 33.203 256 164 6 65 316 215 467 2.49e-31 122
MS.gene006658.t1 MTR_7g102490 34.082 267 146 8 79 319 227 489 2.72e-31 123
MS.gene006658.t1 MTR_0009s0240 30.483 269 172 5 58 316 198 461 3.61e-31 122
MS.gene006658.t1 MTR_7g117405 38.710 186 101 3 120 295 276 458 3.69e-30 119
MS.gene006658.t1 MTR_1g062380 31.944 288 165 9 61 320 213 497 8.24e-30 119
MS.gene006658.t1 MTR_7g013180 37.705 183 104 3 114 296 254 426 1.35e-29 117
MS.gene006658.t1 MTR_2g098430 29.583 240 159 4 69 298 215 454 1.59e-29 117
MS.gene006658.t1 MTR_7g102460 36.500 200 111 5 108 295 264 459 2.68e-29 117
MS.gene006658.t1 MTR_7g102450 37.264 212 116 8 125 321 267 476 3.43e-28 114
MS.gene006658.t1 MTR_8g012635 30.502 259 150 5 57 285 185 443 4.79e-28 113
MS.gene006658.t1 MTR_8g012730 32.558 215 126 3 87 285 69 280 5.45e-28 110
MS.gene006658.t1 MTR_5g027210 28.682 258 153 4 66 293 207 463 6.45e-28 113
MS.gene006658.t1 MTR_8g009050 34.322 236 136 5 93 313 231 462 7.30e-28 113
MS.gene006658.t1 MTR_4g031800 29.151 271 168 5 65 313 200 468 8.53e-28 113
MS.gene006658.t1 MTR_7g117170 32.061 262 158 7 48 294 196 452 2.42e-27 111
MS.gene006658.t1 MTR_7g102560 32.197 264 150 5 58 295 201 461 3.36e-27 111
MS.gene006658.t1 MTR_0184s0030 30.159 252 150 7 58 284 187 437 4.23e-27 110
MS.gene006658.t1 MTR_2g046820 31.086 267 164 7 68 318 202 464 1.03e-26 109
MS.gene006658.t1 MTR_8g009055 31.338 284 167 8 34 298 173 447 1.47e-26 109
MS.gene006658.t1 MTR_6g488280 32.609 230 141 5 70 286 209 437 1.50e-26 109
MS.gene006658.t1 MTR_0428s0010 32.609 230 141 5 70 286 209 437 1.50e-26 109
MS.gene006658.t1 MTR_6g033615 29.600 250 156 6 58 291 188 433 3.83e-26 108
MS.gene006658.t1 MTR_2g046750 29.963 267 167 7 68 318 205 467 4.64e-26 107
MS.gene006658.t1 MTR_6g005600 31.513 238 144 4 54 278 199 430 5.75e-26 107
MS.gene006658.t1 MTR_7g102550 35.000 200 115 4 125 311 282 479 6.66e-26 107
MS.gene006658.t1 MTR_5g087620 28.975 283 177 6 58 316 214 496 7.23e-26 107
MS.gene006658.t1 MTR_1g019520 33.508 191 114 2 119 298 5 193 7.92e-26 102
MS.gene006658.t1 MTR_8g066610 35.052 194 113 4 120 305 279 467 9.36e-26 107
MS.gene006658.t1 MTR_8g006730 28.519 270 178 4 30 286 172 439 1.28e-25 106
MS.gene006658.t1 MTR_6g023665 31.739 230 143 5 70 286 216 444 2.68e-25 105
MS.gene006658.t1 MTR_8g012650 31.336 217 134 2 90 291 231 447 2.73e-25 105
MS.gene006658.t1 MTR_3g009510 29.249 253 154 5 66 295 204 454 3.86e-25 105
MS.gene006658.t1 MTR_4g485590 34.054 185 111 3 79 254 199 381 3.98e-25 104
MS.gene006658.t1 MTR_5g045960 31.373 255 147 7 92 321 239 490 4.78e-25 105
MS.gene006658.t1 MTR_8g012630 33.333 183 106 2 120 286 206 388 5.20e-25 104
MS.gene006658.t1 MTR_7g046490 31.092 238 144 5 70 291 206 439 7.02e-25 104
MS.gene006658.t1 MTR_0078s0060 33.010 206 125 4 100 294 238 441 9.09e-25 104
MS.gene006658.t1 MTR_0184s0040 31.280 211 131 4 100 298 253 461 1.04e-24 104
MS.gene006658.t1 MTR_0078s0190 31.280 211 131 4 100 298 253 461 1.04e-24 104
MS.gene006658.t1 MTR_8g027885 32.124 193 113 3 120 298 265 453 1.12e-24 103
MS.gene006658.t1 MTR_7g013220 31.604 212 131 6 97 305 238 438 1.12e-24 103
MS.gene006658.t1 MTR_8g006260 29.200 250 153 8 57 286 197 442 1.17e-24 103
MS.gene006658.t1 MTR_4g485630 31.602 231 138 6 76 286 216 446 1.20e-24 103
MS.gene006658.t1 MTR_7g102520 34.896 192 113 4 115 295 276 466 1.49e-24 103
MS.gene006658.t1 MTR_8g077590 29.583 240 152 4 61 285 201 438 1.51e-24 103
MS.gene006658.t1 MTR_8g009073 30.224 268 159 8 70 319 77 334 1.60e-24 102
MS.gene006658.t1 MTR_0078s0010 27.626 257 172 4 44 286 180 436 2.01e-24 103
MS.gene006658.t1 MTR_8g009067 31.455 213 133 3 93 294 113 323 2.12e-24 102
MS.gene006658.t1 MTR_6g033625 34.118 170 108 2 119 286 266 433 2.50e-24 103
MS.gene006658.t1 MTR_5g098930 30.667 225 133 6 95 297 228 451 3.47e-24 102
MS.gene006658.t1 MTR_8g012745 31.507 219 128 5 85 285 226 440 3.74e-24 102
MS.gene006658.t1 MTR_5g090610 27.687 307 184 9 46 319 165 466 4.45e-24 102
MS.gene006658.t1 MTR_8g006710 33.889 180 106 3 120 286 259 438 5.31e-24 102
MS.gene006658.t1 MTR_2g040530 30.000 270 163 9 68 318 204 466 5.95e-24 102
MS.gene006658.t1 MTR_5g035580 28.571 266 156 7 43 295 187 431 7.15e-24 101
MS.gene006658.t1 MTR_6g033725 30.041 243 153 5 61 293 202 437 7.96e-24 101
MS.gene006658.t1 MTR_8g009073 30.224 268 159 8 70 319 206 463 7.97e-24 101
MS.gene006658.t1 MTR_7g070810 28.814 236 147 5 65 280 205 439 8.73e-24 101
MS.gene006658.t1 MTR_8g009067 31.429 210 131 3 96 294 234 441 9.69e-24 101
MS.gene006658.t1 MTR_8g027870 31.088 193 115 3 120 298 265 453 1.39e-23 100
MS.gene006658.t1 MTR_5g090580 28.148 270 164 5 66 309 205 470 1.83e-23 100
MS.gene006658.t1 MTR_8g008990 32.579 221 132 5 93 298 231 449 2.30e-23 100
MS.gene006658.t1 MTR_6g035185 34.239 184 104 4 119 286 269 451 2.74e-23 100
MS.gene006658.t1 MTR_5g090700 28.000 275 168 6 58 306 199 469 2.88e-23 100
MS.gene006658.t1 MTR_5g035560 30.986 213 135 4 113 321 255 459 2.96e-23 100
MS.gene006658.t1 MTR_6g033675 29.508 244 163 4 57 292 199 441 3.74e-23 99.8
MS.gene006658.t1 MTR_8g466240 31.373 204 126 5 67 258 198 399 3.79e-23 99.8
MS.gene006658.t1 MTR_1g019510 30.734 218 135 4 93 298 231 444 3.86e-23 99.8
MS.gene006658.t1 MTR_7g070610 33.158 190 113 4 117 294 276 463 5.22e-23 99.4
MS.gene006658.t1 MTR_1g107350 30.888 259 154 9 51 294 197 445 5.30e-23 99.4
MS.gene006658.t1 MTR_1g107360 30.909 220 126 5 66 271 210 417 5.57e-23 99.4
MS.gene006658.t1 MTR_1g032490 30.742 283 166 10 9 271 154 426 5.81e-23 99.4
MS.gene006658.t1 MTR_4g094920 31.250 208 133 5 120 321 281 484 5.85e-23 99.4
MS.gene006658.t1 MTR_2g059240 30.088 226 142 4 76 290 226 446 7.21e-23 99.0
MS.gene006658.t1 MTR_1g107315 33.178 214 119 6 75 271 218 424 7.22e-23 99.0
MS.gene006658.t1 MTR_7g013200 31.250 208 131 5 97 302 227 424 7.32e-23 98.6
MS.gene006658.t1 MTR_5g090620 28.358 268 160 7 58 297 196 459 7.49e-23 99.0
MS.gene006658.t1 MTR_4g117960 35.450 189 106 4 108 280 256 444 8.70e-23 99.0
MS.gene006658.t1 MTR_8g074550 27.148 291 184 5 58 321 203 492 9.95e-23 98.6
MS.gene006658.t1 MTR_5g070040 30.165 242 154 7 59 286 202 442 1.21e-22 98.2
MS.gene006658.t1 MTR_7g070660 31.414 191 117 4 114 292 266 454 1.25e-22 98.2
MS.gene006658.t1 MTR_4g095008 32.212 208 131 6 120 321 266 469 2.49e-22 97.8
MS.gene006658.t1 MTR_4g485620 30.769 260 155 9 66 305 190 444 3.68e-22 96.7
MS.gene006658.t1 MTR_7g047030 29.915 234 145 5 100 316 238 469 3.87e-22 96.7
MS.gene006658.t1 MTR_7g047270 29.915 234 145 5 100 316 238 469 3.87e-22 96.7
MS.gene006658.t1 MTR_7g070740 30.000 190 120 4 114 292 271 458 5.00e-22 96.7
MS.gene006658.t1 MTR_4g128720 31.381 239 148 7 61 297 211 435 5.45e-22 96.3
MS.gene006658.t1 MTR_8g009063 28.521 284 176 7 58 319 201 479 5.52e-22 96.3
MS.gene006658.t1 MTR_7g013240 32.432 185 118 4 97 279 227 406 6.18e-22 95.9
MS.gene006658.t1 MTR_4g117980 32.609 184 108 4 119 287 269 451 7.01e-22 96.3
MS.gene006658.t1 MTR_5g019580 30.000 220 127 5 95 292 265 479 8.96e-22 95.9
MS.gene006658.t1 MTR_5g019580 30.000 220 127 5 95 292 241 455 9.58e-22 95.9
MS.gene006658.t1 MTR_1g107375 30.043 233 135 6 76 294 212 430 1.17e-21 95.5
MS.gene006658.t1 MTR_4g117890 31.937 191 108 6 119 291 261 447 1.18e-21 95.5
MS.gene006658.t1 MTR_1g107285 32.381 210 114 6 76 269 220 417 1.26e-21 95.5
MS.gene006658.t1 MTR_2g035040 32.973 185 108 4 119 287 174 358 1.29e-21 94.7
MS.gene006658.t1 MTR_3g069710 28.125 256 169 7 67 313 202 451 1.32e-21 95.1
MS.gene006658.t1 MTR_7g070940 26.201 229 152 5 74 286 218 445 1.32e-21 95.5
MS.gene006658.t1 MTR_3g049970 33.173 208 119 7 79 271 223 425 1.47e-21 95.1
MS.gene006658.t1 MTR_6g014020 28.968 252 147 7 58 294 226 460 1.78e-21 95.1
MS.gene006658.t1 MTR_4g128690 31.963 219 137 6 61 278 208 415 1.87e-21 94.7
MS.gene006658.t1 MTR_8g064870 32.420 219 124 7 76 275 220 433 2.00e-21 94.7
MS.gene006658.t1 MTR_8g006270 30.047 213 132 6 90 287 227 437 2.29e-21 94.7
MS.gene006658.t1 MTR_0536s0010 30.667 225 132 7 115 321 263 481 2.55e-21 94.4
MS.gene006658.t1 MTR_1g107365 30.952 210 118 5 76 271 251 447 3.01e-21 94.4
MS.gene006658.t1 MTR_3g069690 27.948 229 151 5 74 294 204 426 3.02e-21 94.0
MS.gene006658.t1 MTR_8g008970 30.986 213 134 3 93 294 231 441 3.54e-21 94.7
MS.gene006658.t1 MTR_8g008970 33.540 161 100 2 119 278 597 751 5.09e-18 85.1
MS.gene006658.t1 MTR_7g013260 30.542 203 129 5 97 297 228 420 3.98e-21 93.6
MS.gene006658.t1 MTR_5g098960 34.259 216 116 9 88 292 225 425 4.20e-21 93.6
MS.gene006658.t1 MTR_0288s0020 29.876 241 147 7 56 294 217 437 5.54e-21 93.6
MS.gene006658.t1 MTR_2g014930 36.184 152 48 3 16 166 114 217 8.71e-21 89.7
MS.gene006658.t1 MTR_6g013440 27.070 314 196 12 28 320 183 484 8.82e-21 92.8
MS.gene006658.t1 MTR_8g088560 29.104 268 162 9 66 315 202 459 9.96e-21 92.8
MS.gene006658.t1 MTR_5g090660 28.017 232 146 5 95 306 235 465 1.19e-20 92.8
MS.gene006658.t1 MTR_5g029800 32.948 173 101 3 119 276 265 437 1.40e-20 92.4
MS.gene006658.t1 MTR_7g012120 32.955 176 103 3 120 280 272 447 2.01e-20 92.0
MS.gene006658.t1 MTR_6g033660 31.818 176 116 2 120 293 266 439 2.02e-20 92.0
MS.gene006658.t1 MTR_5g090630 31.068 206 122 5 120 306 254 458 2.53e-20 91.7
MS.gene006658.t1 MTR_5g090670 26.866 268 164 7 58 297 197 460 2.60e-20 91.7
MS.gene006658.t1 MTR_2g034990 32.787 183 107 4 119 286 269 450 3.33e-20 91.3
MS.gene006658.t1 MTR_0536s0020 32.143 196 109 5 119 290 266 461 3.33e-20 91.3
MS.gene006658.t1 MTR_8g044140 26.241 282 168 6 74 317 185 464 3.53e-20 90.9
MS.gene006658.t1 MTR_6g014310 27.273 286 178 10 28 294 183 457 3.75e-20 91.3
MS.gene006658.t1 MTR_6g013900 34.286 175 103 5 114 286 283 447 4.63e-20 90.9
MS.gene006658.t1 MTR_5g067170 32.447 188 112 3 108 280 256 443 4.68e-20 90.9
MS.gene006658.t1 MTR_6g035265 31.609 174 103 3 119 276 260 433 4.69e-20 90.9
MS.gene006658.t1 MTR_2g035020 33.333 177 103 3 119 280 269 445 7.14e-20 90.5
MS.gene006658.t1 MTR_7g070800 27.311 238 152 5 74 292 215 450 8.38e-20 90.1
MS.gene006658.t1 MTR_8g064880 29.767 215 127 7 76 271 222 431 8.40e-20 90.1
MS.gene006658.t1 MTR_4g485640 28.627 255 155 9 58 287 388 640 1.35e-19 89.7
MS.gene006658.t1 MTR_5g040030 26.172 256 161 6 65 294 211 464 1.43e-19 89.4
MS.gene006658.t1 MTR_7g071040 32.796 186 112 4 120 294 284 467 1.46e-19 89.4
MS.gene006658.t1 MTR_7g470610 31.250 160 107 2 114 271 128 286 1.49e-19 87.4
MS.gene006658.t1 MTR_7g070583 31.250 160 107 2 114 271 128 286 1.49e-19 87.4
MS.gene006658.t1 MTR_6g014170 30.000 210 136 6 114 321 266 466 1.62e-19 89.0
MS.gene006658.t1 MTR_7g055710 30.000 190 120 4 114 292 271 458 1.68e-19 89.4
MS.gene006658.t1 MTR_6g038220 28.235 255 146 8 52 283 183 423 1.72e-19 89.0
MS.gene006658.t1 MTR_7g070870 28.095 210 141 4 65 265 212 420 2.31e-19 88.6
MS.gene006658.t1 MTR_6g038200 28.627 255 145 8 52 283 184 424 2.44e-19 88.6
MS.gene006658.t1 MTR_8g465670 32.749 171 102 3 119 276 257 427 2.76e-19 88.6
MS.gene006658.t1 MTR_3g008010 30.806 211 121 7 120 321 288 482 3.13e-19 88.2
MS.gene006658.t1 MTR_6g038240 25.926 243 155 7 52 278 184 417 3.61e-19 88.2
MS.gene006658.t1 MTR_8g083290 32.022 178 114 4 120 295 269 441 3.77e-19 88.2
MS.gene006658.t1 MTR_6g038300 30.818 159 104 2 120 278 266 418 3.81e-19 88.2
MS.gene006658.t1 MTR_6g014150 27.431 288 180 9 50 321 207 481 3.83e-19 88.2
MS.gene006658.t1 MTR_4g108250 30.055 183 115 4 120 291 281 461 3.96e-19 88.2
MS.gene006658.t1 MTR_4g117950 30.769 182 106 4 115 280 249 426 4.84e-19 87.8
MS.gene006658.t1 MTR_7g070780 29.255 188 120 4 116 292 273 458 6.08e-19 87.4
MS.gene006658.t1 MTR_7g011470 26.667 270 173 8 65 320 207 465 6.30e-19 87.4
MS.gene006658.t1 MTR_7g080940 27.586 261 164 7 50 295 180 430 6.45e-19 87.4
MS.gene006658.t1 MTR_7g011470 26.667 270 173 8 65 320 211 469 6.89e-19 87.4
MS.gene006658.t1 MTR_3g479610 25.843 267 174 8 69 320 59 316 8.18e-19 85.9
MS.gene006658.t1 MTR_8g032950 31.795 195 116 4 108 286 256 449 9.01e-19 87.0
MS.gene006658.t1 MTR_6g038230 28.800 250 151 7 52 283 184 424 9.95e-19 86.7
MS.gene006658.t1 MTR_6g014250 25.979 281 182 9 56 321 213 482 1.12e-18 86.7
MS.gene006658.t1 MTR_3g009490 32.335 167 97 4 143 295 2 166 1.36e-18 82.4
MS.gene006658.t1 MTR_5g070090 27.953 254 150 10 58 298 209 442 1.42e-18 86.3
MS.gene006658.t1 MTR_8g006220 31.285 179 102 3 119 276 256 434 1.58e-18 86.3
MS.gene006658.t1 MTR_1g107380 31.737 167 109 4 120 284 279 442 1.86e-18 86.3
MS.gene006658.t1 MTR_7g080935 27.586 261 164 7 50 295 180 430 1.91e-18 85.9
MS.gene006658.t1 MTR_5g090600 25.940 266 166 6 59 306 194 446 1.94e-18 85.9
MS.gene006658.t1 MTR_1g029540 29.442 197 119 4 74 255 206 397 2.09e-18 85.9
MS.gene006658.t1 MTR_8g007585 28.846 208 141 4 114 321 196 396 2.14e-18 85.5
MS.gene006658.t1 MTR_1g040310 31.383 188 112 5 114 287 273 457 2.61e-18 85.9
MS.gene006658.t1 MTR_3g479520 26.601 203 139 4 120 320 292 486 2.66e-18 85.5
MS.gene006658.t1 MTR_6g014270 26.715 277 184 7 56 321 215 483 2.76e-18 85.5
MS.gene006658.t1 MTR_5g058320 25.723 311 205 9 28 320 166 468 3.09e-18 85.5
MS.gene006658.t1 MTR_6g013920 32.386 176 105 5 114 286 283 447 3.12e-18 85.5
MS.gene006658.t1 MTR_4g118000 30.270 185 110 4 119 286 257 439 3.29e-18 85.5
MS.gene006658.t1 MTR_0891s0010 25.000 200 144 3 120 319 99 292 3.33e-18 83.6
MS.gene006658.t1 MTR_6g014050 25.559 313 204 10 28 321 183 485 4.58e-18 85.1
MS.gene006658.t1 MTR_7g080950 29.189 185 122 3 114 298 253 428 4.69e-18 84.7
MS.gene006658.t1 MTR_6g014190 28.910 211 137 7 114 321 91 291 5.41e-18 83.2
MS.gene006658.t1 MTR_3g479490 27.136 199 139 3 120 318 283 475 6.13e-18 84.7
MS.gene006658.t1 MTR_3g079480 28.000 200 127 5 69 254 235 431 6.44e-18 84.3
MS.gene006658.t1 MTR_4g008630 27.826 230 155 4 58 276 194 423 6.69e-18 84.3
MS.gene006658.t1 MTR_5g075440 25.610 246 156 6 66 298 205 436 8.77e-18 84.0
MS.gene006658.t1 MTR_8g056740 28.488 172 119 3 120 290 170 338 8.97e-18 83.6
MS.gene006658.t1 MTR_6g014040 26.198 313 202 10 28 321 183 485 1.20e-17 83.6
MS.gene006658.t1 MTR_7g071050 29.787 188 119 4 110 286 223 408 1.43e-17 83.2
MS.gene006658.t1 MTR_5g004940 34.177 158 99 3 114 267 193 349 1.49e-17 82.8
MS.gene006658.t1 MTR_7g070930 31.522 184 113 4 120 292 281 462 3.34e-17 82.4
MS.gene006658.t1 MTR_7g070910 30.435 184 115 4 120 292 278 459 3.92e-17 82.0
MS.gene006658.t1 MTR_8g059425 25.651 269 177 8 66 321 224 482 5.72e-17 81.6
MS.gene006658.t1 MTR_2g008210 27.969 261 169 6 58 304 211 466 6.47e-17 81.6
MS.gene006658.t1 MTR_6g014200 27.660 235 150 7 71 294 228 453 6.56e-17 81.6
MS.gene006658.t1 MTR_6g011340 28.986 207 129 6 67 258 227 430 6.77e-17 81.6
MS.gene006658.t1 MTR_7g070860 25.893 224 136 3 74 280 216 426 1.21e-16 80.9
MS.gene006658.t1 MTR_4g082810 36.434 129 78 1 120 244 267 395 1.51e-16 80.1
MS.gene006658.t1 MTR_6g013990 26.293 232 151 6 74 294 232 454 1.71e-16 80.1
MS.gene006658.t1 MTR_2086s0010 26.923 182 123 4 140 319 1 174 2.34e-16 76.3
MS.gene006658.t1 MTR_1996s0010 26.923 182 123 4 140 319 1 174 2.34e-16 76.3
MS.gene006658.t1 MTR_5g072820 27.347 245 146 6 66 295 199 426 3.94e-16 79.0
MS.gene006658.t1 MTR_5g016480 25.311 241 162 6 95 321 239 475 5.26e-16 79.0
MS.gene006658.t1 MTR_8g090095 30.412 194 123 4 74 255 224 417 5.28e-16 79.0
MS.gene006658.t1 MTR_6g014220 29.670 182 118 5 114 294 282 454 6.83e-16 78.6
MS.gene006658.t1 MTR_8g083280 31.818 176 108 5 120 293 272 437 7.02e-16 78.6
MS.gene006658.t1 MTR_6g035295 27.391 230 143 6 80 287 229 456 8.08e-16 78.2
MS.gene006658.t1 MTR_6g013450 26.923 234 153 6 56 278 217 443 1.01e-15 77.8
MS.gene006658.t1 MTR_3g084530 27.317 205 132 4 98 295 256 450 1.21e-15 77.8
MS.gene006658.t1 MTR_3g084520 26.108 203 133 4 100 295 258 450 1.22e-15 77.8
MS.gene006658.t1 MTR_4g082820 32.323 198 103 4 120 286 264 461 1.30e-15 77.4
MS.gene006658.t1 MTR_7g039550 26.906 223 140 4 79 280 5 225 1.95e-15 75.5
MS.gene006658.t1 MTR_8g009840 27.723 202 126 3 91 278 295 490 3.59e-15 76.3
MS.gene006658.t1 MTR_6g014240 30.282 142 97 2 114 255 251 390 4.32e-15 75.9
MS.gene006658.t1 MTR_0036s0220 24.896 241 162 5 58 287 216 448 4.84e-15 75.9
MS.gene006658.t1 MTR_6g014290 26.667 210 143 5 114 321 282 482 6.54e-15 75.5
MS.gene006658.t1 MTR_5g464760 26.613 248 149 9 62 295 228 456 7.80e-15 75.1
MS.gene006658.t1 MTR_6g014187 24.825 286 192 7 49 321 209 484 8.60e-15 75.1
MS.gene006658.t1 MTR_3g084540 27.232 224 143 6 82 295 238 451 1.33e-14 74.7
MS.gene006658.t1 MTR_0477s0010 26.794 209 142 5 114 320 121 320 3.22e-14 72.4
MS.gene006658.t1 MTR_5g072810 25.620 242 152 7 68 296 206 432 3.37e-14 73.2
MS.gene006658.t1 MTR_5g464810 27.706 231 148 7 68 287 226 448 3.68e-14 73.2
MS.gene006658.t1 MTR_5g064240 27.706 231 148 7 68 287 226 448 3.68e-14 73.2
MS.gene006658.t1 MTR_5g016660 26.852 216 141 6 114 316 272 483 4.00e-14 73.2
MS.gene006658.t1 MTR_6g013960 24.204 314 207 12 28 321 182 484 4.66e-14 72.8
MS.gene006658.t1 MTR_6g014300 24.691 243 161 9 56 294 218 442 5.17e-14 72.8
MS.gene006658.t1 MTR_7g080900 30.128 156 102 2 120 275 266 414 1.21e-13 71.6
MS.gene006658.t1 MTR_5g031840 26.236 263 167 9 68 318 212 459 1.23e-13 71.6
MS.gene006658.t1 MTR_4g064987 29.319 191 119 6 74 253 208 393 1.59e-13 71.2
MS.gene006658.t1 MTR_4g064987 29.319 191 119 6 74 253 202 387 1.66e-13 71.2
MS.gene006658.t1 MTR_3g479470 27.094 203 128 7 68 255 226 423 1.67e-13 71.2
MS.gene006658.t1 MTR_5g031860 27.039 233 143 8 42 255 190 414 1.92e-13 71.2
MS.gene006658.t1 MTR_5g072830 23.913 230 155 4 66 286 199 417 3.14e-13 70.5
MS.gene006658.t1 MTR_5g039900 23.137 255 165 6 74 306 222 467 6.20e-13 69.7
MS.gene006658.t1 MTR_4g094220 26.383 235 146 9 42 255 194 422 1.18e-12 68.6
MS.gene006658.t1 MTR_8g043470 28.502 207 131 7 120 321 188 382 2.25e-12 67.4
MS.gene006658.t1 MTR_5g072860 23.457 243 158 5 66 295 216 443 3.34e-12 67.4
MS.gene006658.t1 MTR_5g031830 24.257 202 135 3 68 255 218 415 4.38e-12 67.0
MS.gene006658.t1 MTR_0536s0030 30.827 133 79 3 170 291 194 324 5.42e-12 66.2
MS.gene006658.t1 MTR_1g107325 36.250 80 49 1 194 271 229 308 1.65e-11 64.7
MS.gene006658.t1 MTR_5g072840 23.673 245 155 6 66 295 199 426 1.92e-11 65.1
MS.gene006658.t1 MTR_3g031450 23.830 235 151 5 66 286 200 420 1.93e-11 65.1
MS.gene006658.t1 MTR_7g070995 29.565 115 71 2 187 292 6 119 4.30e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene006658.t1 AT5G54010 45.938 320 164 3 2 321 141 451 6.32e-101 304
MS.gene006658.t1 AT4G27570 46.333 300 155 3 21 317 151 447 1.49e-96 293
MS.gene006658.t1 AT5G53990 47.541 305 147 4 21 321 150 445 2.45e-96 292
MS.gene006658.t1 AT4G27560 46.405 306 154 4 21 321 151 451 2.04e-95 290
MS.gene006658.t1 AT5G54060 46.605 324 162 6 2 318 148 467 5.43e-94 287
MS.gene006658.t1 AT1G64910 45.151 299 159 3 21 319 150 443 1.16e-91 280
MS.gene006658.t1 AT1G64920 45.485 299 154 3 26 320 155 448 1.62e-90 277
MS.gene006658.t1 AT2G22930 45.085 295 149 3 25 315 154 439 7.02e-90 275
MS.gene006658.t1 AT3G29630 42.236 322 180 4 2 321 131 448 7.06e-88 270
MS.gene006658.t1 AT4G09500 43.098 297 155 4 23 315 153 439 1.04e-87 270
MS.gene006658.t1 AT3G29630 40.810 321 160 5 2 321 131 422 8.52e-81 251
MS.gene006658.t1 AT4G09500 41.414 297 135 5 23 315 153 414 2.29e-78 245
MS.gene006658.t1 AT1G50580 39.519 291 170 2 25 314 154 439 1.98e-76 241
MS.gene006658.t1 AT2G22590 33.663 303 184 10 21 313 171 466 3.86e-41 149
MS.gene006658.t1 AT5G49690 32.946 258 158 6 61 314 206 452 3.35e-38 141
MS.gene006658.t1 AT5G65550 32.468 308 186 12 18 314 164 460 1.00e-34 132
MS.gene006658.t1 AT2G31750 29.391 279 162 6 62 318 194 459 1.25e-28 115
MS.gene006658.t1 AT2G36780 33.708 267 149 9 76 318 228 490 1.27e-28 115
MS.gene006658.t1 AT2G31750 29.562 274 158 6 62 313 194 454 2.82e-28 114
MS.gene006658.t1 AT2G18570 29.249 253 152 6 61 293 197 442 4.23e-28 114
MS.gene006658.t1 AT5G12890 29.317 249 166 4 57 296 211 458 8.11e-28 113
MS.gene006658.t1 AT3G53150 29.900 301 176 8 26 295 188 484 1.89e-27 112
MS.gene006658.t1 AT1G73880 29.388 245 163 4 80 318 228 468 1.92e-27 112
MS.gene006658.t1 AT2G36760 30.263 304 182 10 41 319 193 491 2.53e-27 112
MS.gene006658.t1 AT2G31790 30.435 276 163 8 58 317 191 453 5.81e-27 110
MS.gene006658.t1 AT2G36750 36.744 215 115 6 120 318 276 485 1.97e-26 109
MS.gene006658.t1 AT5G03490 30.667 225 141 4 74 294 225 438 2.77e-26 108
MS.gene006658.t1 AT2G36770 39.779 181 95 5 120 286 281 461 3.91e-26 108
MS.gene006658.t1 AT1G05680 31.837 245 144 7 62 293 194 428 1.02e-25 107
MS.gene006658.t1 AT4G36770 33.333 228 129 6 95 305 234 455 1.02e-25 107
MS.gene006658.t1 AT2G29730 31.356 236 147 6 59 284 202 432 1.17e-25 107
MS.gene006658.t1 AT4G34131 35.912 181 108 3 120 295 281 458 1.19e-25 107
MS.gene006658.t1 AT1G07250 30.502 259 167 6 69 315 217 474 1.92e-25 106
MS.gene006658.t1 AT3G53160 35.349 215 120 7 120 319 275 485 2.06e-25 106
MS.gene006658.t1 AT3G21790 27.839 273 175 4 62 313 207 478 2.11e-25 106
MS.gene006658.t1 AT2G36800 36.517 178 102 3 120 286 280 457 3.35e-25 105
MS.gene006658.t1 AT1G05675 31.535 241 142 7 66 293 198 428 3.54e-25 105
MS.gene006658.t1 AT2G18560 26.531 245 153 6 69 293 115 352 1.90e-24 102
MS.gene006658.t1 AT1G01420 30.453 243 148 5 58 286 204 439 2.08e-24 103
MS.gene006658.t1 AT1G01420 30.453 243 148 5 58 286 207 442 2.13e-24 103
MS.gene006658.t1 AT4G15280 31.381 239 138 7 100 318 275 507 2.35e-24 103
MS.gene006658.t1 AT4G15280 31.381 239 138 7 100 318 243 475 2.81e-24 103
MS.gene006658.t1 AT4G15260 26.950 282 179 6 58 318 81 356 4.02e-24 101
MS.gene006658.t1 AT4G01070 28.916 249 157 5 58 294 204 444 4.31e-24 102
MS.gene006658.t1 AT2G29710 31.915 235 144 6 61 284 203 432 4.51e-24 102
MS.gene006658.t1 AT1G51210 32.804 189 114 5 74 257 220 400 5.73e-24 101
MS.gene006658.t1 AT2G15480 30.342 234 142 3 79 295 231 460 1.04e-23 101
MS.gene006658.t1 AT4G34138 29.044 272 168 5 62 315 212 476 1.57e-23 100
MS.gene006658.t1 AT3G21780 27.599 279 179 6 58 315 194 470 1.70e-23 100
MS.gene006658.t1 AT2G29740 31.140 228 147 6 68 286 221 447 2.89e-23 100
MS.gene006658.t1 AT5G59580 27.547 265 182 6 55 314 189 448 4.33e-23 99.4
MS.gene006658.t1 AT2G15480 31.197 234 138 4 79 295 231 458 4.48e-23 99.8
MS.gene006658.t1 AT1G07240 29.643 280 176 8 49 313 202 475 1.70e-22 97.8
MS.gene006658.t1 AT4G34135 35.185 162 97 2 120 275 282 441 2.89e-22 97.4
MS.gene006658.t1 AT3G21760 27.586 261 164 7 61 298 207 465 3.43e-22 97.1
MS.gene006658.t1 AT2G16890 28.862 246 157 7 79 313 229 467 3.52e-22 97.1
MS.gene006658.t1 AT1G10400 27.341 267 164 9 62 310 209 463 6.51e-22 96.3
MS.gene006658.t1 AT2G15490 30.180 222 142 3 79 287 228 449 7.37e-22 96.3
MS.gene006658.t1 AT3G50740 28.906 256 152 7 52 286 199 445 7.50e-22 96.3
MS.gene006658.t1 AT5G59590 26.198 313 190 8 6 313 173 449 1.17e-21 95.5
MS.gene006658.t1 AT3G21800 28.512 242 154 6 58 286 199 434 1.26e-21 95.5
MS.gene006658.t1 AT5G26310 27.178 287 174 8 57 315 187 466 1.31e-21 95.5
MS.gene006658.t1 AT2G15490 30.222 225 141 4 79 287 228 452 1.40e-21 95.1
MS.gene006658.t1 AT2G29750 33.505 194 121 5 100 286 255 447 4.02e-21 94.0
MS.gene006658.t1 AT2G36790 37.640 178 100 4 120 286 280 457 5.85e-21 93.6
MS.gene006658.t1 AT2G36970 28.814 236 153 6 66 296 224 449 5.91e-21 93.6
MS.gene006658.t1 AT2G30150 29.008 262 164 8 66 317 191 440 7.12e-21 92.8
MS.gene006658.t1 AT2G30150 29.008 262 164 8 66 317 207 456 9.30e-21 92.8
MS.gene006658.t1 AT5G66690 27.402 281 175 5 59 315 191 466 1.06e-20 92.8
MS.gene006658.t1 AT2G16890 30.000 200 129 4 79 272 229 423 1.08e-20 92.4
MS.gene006658.t1 AT4G14090 30.208 192 125 5 114 302 255 440 1.50e-20 92.0
MS.gene006658.t1 AT3G16520 32.692 156 101 1 120 271 263 418 2.01e-20 91.7
MS.gene006658.t1 AT3G16520 32.692 156 101 1 120 271 263 418 2.19e-20 91.7
MS.gene006658.t1 AT3G16520 32.692 156 101 1 120 271 263 418 2.38e-20 91.7
MS.gene006658.t1 AT2G43820 29.707 239 140 7 95 314 218 447 2.93e-20 91.3
MS.gene006658.t1 AT1G07260 28.509 228 153 4 95 313 245 471 3.53e-20 91.3
MS.gene006658.t1 AT5G05860 28.319 226 149 6 69 287 202 421 3.77e-20 90.9
MS.gene006658.t1 AT3G21750 25.926 243 157 4 95 318 232 470 3.94e-20 90.9
MS.gene006658.t1 AT3G11340 26.160 237 166 5 65 296 195 427 6.04e-20 90.5
MS.gene006658.t1 AT4G15480 30.481 187 118 5 80 257 235 418 7.11e-20 90.5
MS.gene006658.t1 AT1G01390 30.131 229 139 6 93 303 232 457 7.42e-20 90.1
MS.gene006658.t1 AT1G01390 30.131 229 139 6 93 303 249 474 8.61e-20 90.1
MS.gene006658.t1 AT5G17050 26.556 241 155 7 61 295 210 434 1.04e-19 89.7
MS.gene006658.t1 AT3G46670 29.004 231 154 5 61 287 196 420 1.70e-19 89.0
MS.gene006658.t1 AT3G46680 28.629 248 160 6 61 304 197 431 2.35e-19 88.6
MS.gene006658.t1 AT1G30530 27.157 313 199 9 21 318 154 452 2.76e-19 88.6
MS.gene006658.t1 AT5G14860 28.226 248 157 10 79 313 236 475 3.26e-19 88.6
MS.gene006658.t1 AT1G06000 28.821 229 149 5 58 272 164 392 1.06e-18 86.7
MS.gene006658.t1 AT5G17030 26.996 263 173 9 61 317 207 456 1.22e-18 86.7
MS.gene006658.t1 AT4G15500 35.971 139 83 3 120 257 269 402 1.23e-18 86.7
MS.gene006658.t1 AT2G43840 29.289 239 141 7 95 314 218 447 1.32e-18 86.3
MS.gene006658.t1 AT3G55700 28.340 247 162 8 74 313 212 450 1.33e-18 86.7
MS.gene006658.t1 AT2G43840 29.289 239 141 7 95 314 218 447 1.39e-18 86.3
MS.gene006658.t1 AT3G22250 32.308 195 114 8 120 308 276 458 1.69e-18 86.3
MS.gene006658.t1 AT3G21560 31.579 171 109 4 120 287 279 444 2.17e-18 85.9
MS.gene006658.t1 AT4G15490 28.272 191 123 5 76 257 221 406 2.29e-18 85.9
MS.gene006658.t1 AT3G46660 30.964 197 126 5 95 287 237 427 2.79e-18 85.5
MS.gene006658.t1 AT2G23250 29.952 207 131 6 94 291 210 411 4.71e-18 84.7
MS.gene006658.t1 AT3G46690 29.146 199 134 4 61 254 196 392 6.06e-18 84.3
MS.gene006658.t1 AT3G55710 34.177 158 97 4 120 275 263 415 9.63e-18 84.0
MS.gene006658.t1 AT5G38040 27.381 252 169 6 69 313 205 449 1.24e-17 83.6
MS.gene006658.t1 AT5G05880 27.064 218 147 6 69 280 203 414 1.29e-17 83.6
MS.gene006658.t1 AT2G30140 27.848 237 145 7 69 295 209 429 1.96e-17 83.2
MS.gene006658.t1 AT2G30140 27.848 237 145 7 69 295 208 428 2.03e-17 82.8
MS.gene006658.t1 AT1G78270 28.977 176 118 4 120 295 289 457 4.30e-17 82.0
MS.gene006658.t1 AT1G05560 27.273 209 138 4 117 318 298 499 5.91e-17 81.6
MS.gene006658.t1 AT5G05870 24.809 262 183 7 65 318 204 459 6.73e-17 81.6
MS.gene006658.t1 AT1G05560 27.670 206 135 4 120 318 251 449 7.29e-17 81.3
MS.gene006658.t1 AT3G46700 26.354 277 182 8 51 318 179 442 1.11e-16 80.9
MS.gene006658.t1 AT2G23260 29.480 173 116 4 120 291 262 429 1.26e-16 80.5
MS.gene006658.t1 AT4G15550 26.950 282 182 9 30 295 178 451 1.44e-16 80.5
MS.gene006658.t1 AT1G05530 27.807 187 124 3 116 295 250 432 2.06e-16 80.1
MS.gene006658.t1 AT1G24100 29.000 200 130 5 120 318 268 456 2.93e-16 79.7
MS.gene006658.t1 AT5G17040 25.746 268 172 8 61 318 89 339 3.52e-16 78.6
MS.gene006658.t1 AT5G17040 25.373 268 173 8 61 318 191 441 4.26e-16 79.0
MS.gene006658.t1 AT5G05890 26.108 203 143 4 58 255 196 396 1.06e-15 77.8
MS.gene006658.t1 AT2G28080 25.806 186 131 3 95 275 251 434 1.27e-15 77.8
MS.gene006658.t1 AT5G38010 28.175 252 167 7 69 313 209 453 1.89e-15 77.0
MS.gene006658.t1 AT1G22400 32.143 168 104 5 120 286 291 449 2.91e-15 76.6
MS.gene006658.t1 AT2G22930 39.506 81 49 0 235 315 207 287 3.10e-15 75.1
MS.gene006658.t1 AT1G22380 27.381 252 159 8 58 295 216 457 6.61e-15 75.5
MS.gene006658.t1 AT5G05900 25.683 183 126 4 76 255 216 391 8.04e-15 75.1
MS.gene006658.t1 AT3G46720 28.218 202 130 5 89 287 223 412 1.07e-14 74.7
MS.gene006658.t1 AT1G22360 28.977 176 117 4 120 295 287 454 1.58e-14 74.3
MS.gene006658.t1 AT1G22340 25.410 244 159 6 62 295 228 458 1.22e-13 71.6
MS.gene006658.t1 AT1G22360 31.111 135 91 2 120 254 287 419 1.23e-13 71.6
MS.gene006658.t1 AT3G46650 25.105 239 167 6 61 293 180 412 3.04e-12 67.4
MS.gene006658.t1 AT3G02100 26.966 178 113 4 120 297 279 439 4.11e-12 67.0
MS.gene006658.t1 AT1G22370 26.866 201 131 4 63 254 54 247 6.07e-12 65.9
MS.gene006658.t1 AT1G22370 26.733 202 132 4 62 254 223 417 1.20e-11 65.9
MS.gene006658.t1 AT2G26480 24.893 233 153 9 80 304 209 427 1.97e-11 65.1

Find 58 sgRNAs with CRISPR-Local

Find 69 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAGGAAGAGGTGTTGTTTA+TGG 0.175872 4.1:-26678289 MS.gene006658:CDS
CAAGAATCAATTCTTGAAAT+TGG 0.182763 4.1:+26678413 None:intergenic
GGTTCAGCAGCAATTGATTT+TGG 0.204250 4.1:-26678260 MS.gene006658:CDS
AATATCCGGTCACCAAAATT+TGG 0.207306 4.1:+26678148 None:intergenic
CAATTTCAAGAATTGATTCT+TGG 0.231442 4.1:-26678412 MS.gene006658:CDS
TAGAGAGATGTTGCTTAATA+AGG 0.250165 4.1:-26677966 MS.gene006658:CDS
GGATTTGCAGAGAGGATTAA+AGG 0.253763 4.1:-26678307 MS.gene006658:CDS
ATTCTTGGTCTAGAGCTATT+TGG 0.268623 4.1:-26678397 MS.gene006658:CDS
TTCATTACACATTGTGGTTC+AGG 0.273449 4.1:-26678217 MS.gene006658:CDS
TGAAAATCCAAATTATGTTT+TGG 0.273964 4.1:-26678524 MS.gene006658:CDS
TTAAATGAAGCTGATGCATT+AGG 0.322997 4.1:-26678646 MS.gene006658:CDS
TCTGTTGTTTATTGCTGTTT+TGG 0.323941 4.1:-26678460 MS.gene006658:CDS
GCAGCTTTGAAACCTCCTTT+TGG 0.329181 4.1:-26678361 MS.gene006658:CDS
ATCCTCTCTGCAAATCCTTC+TGG 0.331581 4.1:+26678313 None:intergenic
GATCTCATGAAACCTCCTTA+TGG 0.342458 4.1:-26678781 MS.gene006658:CDS
GAGGTGTTGTTTATGGTGGT+TGG 0.345051 4.1:-26678282 MS.gene006658:CDS
AATAAACCAGTTCTTACTTC+AGG 0.348630 4.1:-26678565 MS.gene006658:CDS
ATCAATTCTTGAAATTGGTT+TGG 0.357969 4.1:+26678418 None:intergenic
TGAAGCTTGATAGATGAATC+AGG 0.396613 4.1:+26678754 None:intergenic
AGGTGTTGTTTATGGTGGTT+GGG 0.398981 4.1:-26678281 MS.gene006658:CDS
AGGTTCTTTGTCTGAGGCAT+TGG 0.416248 4.1:-26678197 MS.gene006658:CDS
ATTGGTGAATAAGTGTCAAT+TGG 0.433255 4.1:-26678179 MS.gene006658:CDS
GTTGGTGTGGAAGTTCAAAA+AGG 0.448590 4.1:-26678094 MS.gene006658:CDS
AAGCAACATCTCTCTAATCT+TGG 0.450181 4.1:+26677973 None:intergenic
TGATTCTAGCATTCAATATC+CGG 0.461922 4.1:+26678134 None:intergenic
TCAATTGTTTCAAAACCAAA+AGG 0.472728 4.1:+26678346 None:intergenic
ATCAGCTTCATTTAAAGCAA+TGG 0.484336 4.1:+26678654 None:intergenic
TAGTCATGAAGCAAAAGCTT+TGG 0.485940 4.1:-26678731 MS.gene006658:CDS
AGTGGGCAACTTGGCTTGGT+GGG 0.489622 4.1:-26678495 MS.gene006658:CDS
ATGGCAAATAACTTGAAAGT+TGG 0.494900 4.1:-26678112 MS.gene006658:CDS
ACAGGTCCTGAAGTAAGAAC+TGG 0.498129 4.1:+26678559 None:intergenic
AGAACATGCAGAGAGATTGA+AGG 0.502421 4.1:-26678619 MS.gene006658:CDS
TGGATGAAAAGTGGGCAACT+TGG 0.504266 4.1:-26678504 MS.gene006658:CDS
AAGTGGGCAACTTGGCTTGG+TGG 0.505206 4.1:-26678496 MS.gene006658:CDS
TGGTTCAGGTTCTTTGTCTG+AGG 0.506798 4.1:-26678203 MS.gene006658:CDS
GAAAAGTGGGCAACTTGGCT+TGG 0.508176 4.1:-26678499 MS.gene006658:CDS
GCAGAGAGGATTAAAGGAAG+AGG 0.508597 4.1:-26678301 MS.gene006658:CDS
CAAAAGCTTTGGCTGCTATG+AGG 0.517948 4.1:-26678720 MS.gene006658:CDS
GATATTGAATGCTAGAATCA+TGG 0.524362 4.1:-26678131 MS.gene006658:CDS
GATGAATCAGGGTAACCATA+AGG 0.528758 4.1:+26678766 None:intergenic
ATTATTAGTTCAATCATGGT+TGG 0.536141 4.1:-26678856 None:intergenic
GGAAGAGGTGTTGTTTATGG+TGG 0.545609 4.1:-26678286 MS.gene006658:CDS
TGAAGATGGATTCTATACTA+AGG 0.545893 4.1:-26678071 MS.gene006658:CDS
AACACCGGCTAGATATTCAC+AGG 0.547923 4.1:-26678824 MS.gene006658:CDS
TTCTGTACGTAATCAAGATA+AGG 0.555007 4.1:+26678595 None:intergenic
GGGTGTTTCATTACACATTG+TGG 0.579728 4.1:-26678223 MS.gene006658:CDS
ATTGTTTCAAAACCAAAAGG+AGG 0.579730 4.1:+26678349 None:intergenic
TAAAGCTGTAAGCATTGTGA+TGG 0.584788 4.1:-26678038 MS.gene006658:CDS
TTTCCCTGTGAATATCTAGC+CGG 0.594945 4.1:+26678820 None:intergenic
ATTGAAGAAGCATTACCAGA+AGG 0.611137 4.1:-26678328 MS.gene006658:CDS
TACCAGAAGGATTTGCAGAG+AGG 0.612468 4.1:-26678315 MS.gene006658:CDS
GTAATGAAACACCCCACAGA+AGG 0.621550 4.1:+26678232 None:intergenic
GAAGCTTGATAGATGAATCA+GGG 0.623346 4.1:+26678755 None:intergenic
TAATGAAACACCCCACAGAA+GGG 0.647868 4.1:+26678233 None:intergenic
GAATCAGGGTAACCATAAGG+AGG 0.677745 4.1:+26678769 None:intergenic
AAATAACTTGAAAGTTGGTG+TGG 0.682267 4.1:-26678107 MS.gene006658:CDS
GGTTGGTTACAGTCTAACAC+CGG 0.725128 4.1:-26678839 MS.gene006658:CDS
ACACCGGCTAGATATTCACA+GGG 0.752080 4.1:-26678823 MS.gene006658:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGAAAATCCAAATTATGTTT+TGG - chr4.1:26678215-26678234 MS.gene006658:CDS 20.0%
!!! TTTTCATCCAAAACATAATT+TGG + chr4.1:26678225-26678244 None:intergenic 20.0%
! ATCAATTCTTGAAATTGGTT+TGG + chr4.1:26678324-26678343 None:intergenic 25.0%
! CAAGAATCAATTCTTGAAAT+TGG + chr4.1:26678329-26678348 None:intergenic 25.0%
! TCAATTGTTTCAAAACCAAA+AGG + chr4.1:26678396-26678415 None:intergenic 25.0%
!! CAATTTCAAGAATTGATTCT+TGG - chr4.1:26678327-26678346 MS.gene006658:CDS 25.0%
!!! ATTATGTTTTGGATGAAAAG+TGG - chr4.1:26678226-26678245 MS.gene006658:CDS 25.0%
!!! TTATGTTTTGGATGAAAAGT+GGG - chr4.1:26678227-26678246 MS.gene006658:CDS 25.0%
AATAAACCAGTTCTTACTTC+AGG - chr4.1:26678174-26678193 MS.gene006658:CDS 30.0%
ATGGCAAATAACTTGAAAGT+TGG - chr4.1:26678627-26678646 MS.gene006658:CDS 30.0%
ATTGGTGAATAAGTGTCAAT+TGG - chr4.1:26678560-26678579 MS.gene006658:CDS 30.0%
ATTGTTTCAAAACCAAAAGG+AGG + chr4.1:26678393-26678412 None:intergenic 30.0%
GATATTGAATGCTAGAATCA+TGG - chr4.1:26678608-26678627 MS.gene006658:CDS 30.0%
TGATTCTAGCATTCAATATC+CGG + chr4.1:26678608-26678627 None:intergenic 30.0%
TTAAATGAAGCTGATGCATT+AGG - chr4.1:26678093-26678112 MS.gene006658:CDS 30.0%
TTCTGTACGTAATCAAGATA+AGG + chr4.1:26678147-26678166 None:intergenic 30.0%
! ATCAGCTTCATTTAAAGCAA+TGG + chr4.1:26678088-26678107 None:intergenic 30.0%
! TAGAGAGATGTTGCTTAATA+AGG - chr4.1:26678773-26678792 MS.gene006658:CDS 30.0%
! TGAAGATGGATTCTATACTA+AGG - chr4.1:26678668-26678687 MS.gene006658:CDS 30.0%
!! AAATAACTTGAAAGTTGGTG+TGG - chr4.1:26678632-26678651 MS.gene006658:CDS 30.0%
!!! TCTGTTGTTTATTGCTGTTT+TGG - chr4.1:26678279-26678298 MS.gene006658:CDS 30.0%
!!! TTGGTTTTGTTGCCAAATTT+TGG - chr4.1:26678579-26678598 MS.gene006658:CDS 30.0%
!!! TTTTCAAGTATCTGTAGAAC+AGG + chr4.1:26678201-26678220 None:intergenic 30.0%
AAGCAACATCTCTCTAATCT+TGG + chr4.1:26678769-26678788 None:intergenic 35.0%
AATATCCGGTCACCAAAATT+TGG + chr4.1:26678594-26678613 None:intergenic 35.0%
GAAGCTTGATAGATGAATCA+GGG + chr4.1:26677987-26678006 None:intergenic 35.0%
GAAGTTCAAAAAGGTGAAGA+TGG - chr4.1:26678654-26678673 MS.gene006658:CDS 35.0%
GGTTTCAAAGCTGCAAAAAA+TGG + chr4.1:26678372-26678391 None:intergenic 35.0%
TAGTCATGAAGCAAAAGCTT+TGG - chr4.1:26678008-26678027 MS.gene006658:CDS 35.0%
TGAAGCTTGATAGATGAATC+AGG + chr4.1:26677988-26678007 None:intergenic 35.0%
TTCATTACACATTGTGGTTC+AGG - chr4.1:26678522-26678541 MS.gene006658:CDS 35.0%
! ATTCTTGGTCTAGAGCTATT+TGG - chr4.1:26678342-26678361 MS.gene006658:CDS 35.0%
! GCTATGAGGAAAAACACTTT+TGG - chr4.1:26678033-26678052 MS.gene006658:CDS 35.0%
! TAAAGCTGTAAGCATTGTGA+TGG - chr4.1:26678701-26678720 MS.gene006658:CDS 35.0%
!! AAAGGAAGAGGTGTTGTTTA+TGG - chr4.1:26678450-26678469 MS.gene006658:CDS 35.0%
!! ATTGAAGAAGCATTACCAGA+AGG - chr4.1:26678411-26678430 MS.gene006658:CDS 35.0%
AGAACATGCAGAGAGATTGA+AGG - chr4.1:26678120-26678139 MS.gene006658:CDS 40.0%
GATCTCATGAAACCTCCTTA+TGG - chr4.1:26677958-26677977 MS.gene006658:CDS 40.0%
GATGAATCAGGGTAACCATA+AGG + chr4.1:26677976-26677995 None:intergenic 40.0%
GGATTTGCAGAGAGGATTAA+AGG - chr4.1:26678432-26678451 MS.gene006658:CDS 40.0%
GGGTGTTTCATTACACATTG+TGG - chr4.1:26678516-26678535 MS.gene006658:CDS 40.0%
GTTGGTGTGGAAGTTCAAAA+AGG - chr4.1:26678645-26678664 MS.gene006658:CDS 40.0%
TAATGAAACACCCCACAGAA+GGG + chr4.1:26678509-26678528 None:intergenic 40.0%
TTTCCCTGTGAATATCTAGC+CGG + chr4.1:26677922-26677941 None:intergenic 40.0%
!! AGGTGTTGTTTATGGTGGTT+GGG - chr4.1:26678458-26678477 MS.gene006658:CDS 40.0%
!! GGTTCAGCAGCAATTGATTT+TGG - chr4.1:26678479-26678498 MS.gene006658:CDS 40.0%
!! TGTTGCCAAATTTTGGTGAC+CGG - chr4.1:26678586-26678605 MS.gene006658:CDS 40.0%
!!! ATTTTGGAACACCCTTCTGT+GGG - chr4.1:26678495-26678514 MS.gene006658:CDS 40.0%
ACAGGTCCTGAAGTAAGAAC+TGG + chr4.1:26678183-26678202 None:intergenic 45.0%
ATCCTCTCTGCAAATCCTTC+TGG + chr4.1:26678429-26678448 None:intergenic 45.0%
GAATCAGGGTAACCATAAGG+AGG + chr4.1:26677973-26677992 None:intergenic 45.0%
GCAGAGAGGATTAAAGGAAG+AGG - chr4.1:26678438-26678457 MS.gene006658:CDS 45.0%
GTAATGAAACACCCCACAGA+AGG + chr4.1:26678510-26678529 None:intergenic 45.0%
TACCAGAAGGATTTGCAGAG+AGG - chr4.1:26678424-26678443 MS.gene006658:CDS 45.0%
TGGATGAAAAGTGGGCAACT+TGG - chr4.1:26678235-26678254 MS.gene006658:CDS 45.0%
! AACACCGGCTAGATATTCAC+AGG - chr4.1:26677915-26677934 MS.gene006658:CDS 45.0%
! ACACCGGCTAGATATTCACA+GGG - chr4.1:26677916-26677935 MS.gene006658:CDS 45.0%
! AGGTTCTTTGTCTGAGGCAT+TGG - chr4.1:26678542-26678561 MS.gene006658:CDS 45.0%
! CAAAAGCTTTGGCTGCTATG+AGG - chr4.1:26678019-26678038 MS.gene006658:CDS 45.0%
! GGTTGGTTACAGTCTAACAC+CGG - chr4.1:26677900-26677919 MS.gene006658:CDS 45.0%
! TGGTTCAGGTTCTTTGTCTG+AGG - chr4.1:26678536-26678555 MS.gene006658:CDS 45.0%
!! GAGGTGTTGTTTATGGTGGT+TGG - chr4.1:26678457-26678476 MS.gene006658:CDS 45.0%
!! GGAAGAGGTGTTGTTTATGG+TGG - chr4.1:26678453-26678472 MS.gene006658:CDS 45.0%
!!! GATTTTGGAACACCCTTCTG+TGG - chr4.1:26678494-26678513 MS.gene006658:CDS 45.0%
!!! GCAGCTTTGAAACCTCCTTT+TGG - chr4.1:26678378-26678397 MS.gene006658:CDS 45.0%
!!! TTTTGGAACACCCTTCTGTG+GGG - chr4.1:26678496-26678515 MS.gene006658:CDS 45.0%
GAAAAGTGGGCAACTTGGCT+TGG - chr4.1:26678240-26678259 MS.gene006658:CDS 50.0%
!! AAGTGGGCAACTTGGCTTGG+TGG - chr4.1:26678243-26678262 MS.gene006658:CDS 55.0%
!! AGTGGGCAACTTGGCTTGGT+GGG - chr4.1:26678244-26678263 MS.gene006658:CDS 55.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 26677898 26678863 26677898 ID=MS.gene006658
chr4.1 mRNA 26677898 26678863 26677898 ID=MS.gene006658.t1;Parent=MS.gene006658
chr4.1 exon 26677898 26678863 26677898 ID=MS.gene006658.t1.exon1;Parent=MS.gene006658.t1
chr4.1 CDS 26677898 26678863 26677898 ID=cds.MS.gene006658.t1;Parent=MS.gene006658.t1
Gene Sequence

>MS.gene006658

ATGGTTGGTTACAGTCTAACACCGGCTAGATATTCACAGGGAAACAATTTAACTGAGTTTGATCTCATGAAACCTCCTTATGGTTACCCTGATTCATCTATCAAGCTTCATAGTCATGAAGCAAAAGCTTTGGCTGCTATGAGGAAAAACACTTTTGGTAGCAATGTTCTTTTTTATGATCGACAAGCCATTGCTTTAAATGAAGCTGATGCATTAGGATATAGAACATGCAGAGAGATTGAAGGACCTTATCTTGATTACGTACAGAATCAGTTTAATAAACCAGTTCTTACTTCAGGACCTGTTCTACAGATACTTGAAAATCCAAATTATGTTTTGGATGAAAAGTGGGCAACTTGGCTTGGTGGGTTCAAAGCAGATTCTGTTGTTTATTGCTGTTTTGGAAGTGAATGCAATTTAATACCAAACCAATTTCAAGAATTGATTCTTGGTCTAGAGCTATTTGGTATGCCATTTTTTGCAGCTTTGAAACCTCCTTTTGGTTTTGAAACAATTGAAGAAGCATTACCAGAAGGATTTGCAGAGAGGATTAAAGGAAGAGGTGTTGTTTATGGTGGTTGGGTTCAGCAGCAATTGATTTTGGAACACCCTTCTGTGGGGTGTTTCATTACACATTGTGGTTCAGGTTCTTTGTCTGAGGCATTGGTGAATAAGTGTCAATTGGTTTTGTTGCCAAATTTTGGTGACCGGATATTGAATGCTAGAATCATGGCAAATAACTTGAAAGTTGGTGTGGAAGTTCAAAAAGGTGAAGATGGATTCTATACTAAGGATAATGTTTGTAAAGCTGTAAGCATTGTGATGGATGATGAAAATGAAATTAGTAAGAAAGTAAGAGCTAATCATGCCAAGATTAGAGAGATGTTGCTTAATAAGGATCTTGAGTCATCTTATATTGATAATTTCTGCAAGAAGCTTCAAGAGATTGTCGAGAAAAAGAATTAA

Protein sequence

>MS.gene006658.t1

MVGYSLTPARYSQGNNLTEFDLMKPPYGYPDSSIKLHSHEAKALAAMRKNTFGSNVLFYDRQAIALNEADALGYRTCREIEGPYLDYVQNQFNKPVLTSGPVLQILENPNYVLDEKWATWLGGFKADSVVYCCFGSECNLIPNQFQELILGLELFGMPFFAALKPPFGFETIEEALPEGFAERIKGRGVVYGGWVQQQLILEHPSVGCFITHCGSGSLSEALVNKCQLVLLPNFGDRILNARIMANNLKVGVEVQKGEDGFYTKDNVCKAVSIVMDDENEISKKVRANHAKIREMLLNKDLESSYIDNFCKKLQEIVEKKN