AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene045539


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene045539.t1 MTR_4g079270 87.601 371 44 1 1 369 91 461 0.0 682
MS.gene045539.t1 MTR_4g079250 84.906 371 54 1 1 369 91 461 0.0 664
MS.gene045539.t1 MTR_2g014900 55.707 368 162 1 1 367 90 457 1.99e-154 442
MS.gene045539.t1 MTR_2g083490 58.696 368 150 2 1 366 91 458 1.15e-153 441
MS.gene045539.t1 MTR_2g083480 58.197 366 151 2 2 365 92 457 4.45e-152 437
MS.gene045539.t1 MTR_2g083380 58.424 368 151 2 1 366 108 475 4.14e-149 430
MS.gene045539.t1 MTR_2g083430 57.493 367 154 2 2 366 92 458 5.86e-148 426
MS.gene045539.t1 MTR_2g083390 55.313 367 138 3 2 366 92 434 5.34e-142 410
MS.gene045539.t1 MTR_2g083420 52.861 367 147 3 2 366 92 434 2.07e-136 396
MS.gene045539.t1 MTR_1g090270 42.742 372 203 7 3 365 94 464 2.69e-101 307
MS.gene045539.t1 MTR_4g079280 85.235 149 9 1 1 149 49 184 2.01e-90 270
MS.gene045539.t1 MTR_4g059370 41.520 342 178 7 32 366 66 392 4.82e-85 263
MS.gene045539.t1 MTR_2g083360 40.437 366 113 5 2 366 113 374 2.50e-84 261
MS.gene045539.t1 MTR_2g086283 39.617 366 109 7 1 365 81 335 3.50e-79 246
MS.gene045539.t1 MTR_4g123553 33.512 373 224 10 3 364 100 459 2.84e-51 177
MS.gene045539.t1 MTR_2g008220 33.787 367 221 12 8 362 105 461 1.04e-48 171
MS.gene045539.t1 MTR_1g090280 45.902 183 94 3 189 366 133 315 3.54e-48 166
MS.gene045539.t1 MTR_2g008225 33.243 367 223 11 8 362 106 462 1.93e-47 167
MS.gene045539.t1 MTR_2g008226 32.898 383 221 14 3 363 99 467 3.40e-46 164
MS.gene045539.t1 MTR_6g042310 32.804 378 220 11 3 364 103 462 7.66e-46 163
MS.gene045539.t1 MTR_4g077960 31.662 379 223 12 3 364 77 436 6.65e-44 157
MS.gene045539.t1 MTR_2g046620 31.099 373 233 10 3 364 101 460 1.02e-42 155
MS.gene045539.t1 MTR_6g036650 31.937 382 224 11 3 364 104 469 3.90e-41 150
MS.gene045539.t1 MTR_7g067330 30.000 370 212 13 3 363 95 426 1.80e-40 148
MS.gene045539.t1 MTR_8g007565 29.787 376 244 7 3 364 95 464 5.39e-40 147
MS.gene045539.t1 MTR_8g007650 29.787 376 244 7 3 364 95 464 1.14e-39 147
MS.gene045539.t1 MTR_5g066410 28.760 379 229 7 3 364 86 440 4.18e-38 142
MS.gene045539.t1 MTR_2g014930 37.864 206 65 4 11 215 74 217 4.54e-37 134
MS.gene045539.t1 MTR_8g068330 27.822 381 250 11 3 367 94 465 1.03e-35 135
MS.gene045539.t1 MTR_7g067120 29.867 375 198 12 3 359 95 422 2.07e-35 134
MS.gene045539.t1 MTR_8g068360 28.255 361 233 11 23 367 118 468 3.66e-35 134
MS.gene045539.t1 MTR_2g083440 55.752 113 40 3 256 366 8 112 1.88e-33 120
MS.gene045539.t1 MTR_3g435310 29.945 364 205 10 3 364 103 418 2.83e-33 128
MS.gene045539.t1 MTR_8g068340 28.647 377 248 12 3 365 98 467 1.05e-32 127
MS.gene045539.t1 MTR_2g098430 25.770 357 238 9 9 347 107 454 3.19e-30 121
MS.gene045539.t1 MTR_8g071070 29.730 259 172 5 117 365 213 471 3.94e-30 120
MS.gene045539.t1 MTR_0009s0240 29.167 264 180 4 109 365 198 461 3.36e-29 117
MS.gene045539.t1 MTR_7g013180 37.705 183 104 4 163 345 254 426 2.52e-27 112
MS.gene045539.t1 MTR_1g062380 31.273 275 157 9 112 356 213 485 2.20e-26 110
MS.gene045539.t1 MTR_7g117405 33.202 253 141 5 117 344 209 458 2.21e-26 110
MS.gene045539.t1 MTR_5g045970 30.314 287 168 10 112 369 213 496 3.29e-26 109
MS.gene045539.t1 MTR_6g005600 28.165 316 197 4 34 328 125 431 4.13e-26 109
MS.gene045539.t1 MTR_7g013220 27.901 362 228 14 5 356 107 445 6.63e-26 108
MS.gene045539.t1 MTR_8g066610 27.013 385 233 9 2 354 99 467 6.67e-26 108
MS.gene045539.t1 MTR_7g102450 32.558 258 147 6 114 344 192 449 6.73e-26 108
MS.gene045539.t1 MTR_7g102490 33.047 233 129 7 157 366 266 494 8.62e-26 108
MS.gene045539.t1 MTR_4g024020 33.831 201 116 5 157 344 266 462 3.10e-25 107
MS.gene045539.t1 MTR_8g012635 33.333 198 115 2 146 329 242 436 6.02e-25 105
MS.gene045539.t1 MTR_4g485590 31.628 215 133 3 100 303 170 381 1.31e-24 104
MS.gene045539.t1 MTR_7g102460 32.189 233 131 7 157 366 264 492 2.28e-24 104
MS.gene045539.t1 MTR_2g046820 31.086 267 162 8 119 367 202 464 3.40e-24 103
MS.gene045539.t1 MTR_5g027210 27.698 278 167 5 117 361 207 483 4.27e-24 103
MS.gene045539.t1 MTR_0184s0030 31.053 190 118 3 169 347 261 448 5.87e-24 103
MS.gene045539.t1 MTR_8g012730 31.220 205 126 2 138 328 69 272 8.70e-24 100
MS.gene045539.t1 MTR_7g117170 31.621 253 146 7 112 343 206 452 1.19e-23 102
MS.gene045539.t1 MTR_7g013200 33.333 183 112 4 169 351 252 424 1.59e-23 101
MS.gene045539.t1 MTR_4g031800 34.659 176 109 3 152 322 249 423 2.21e-23 101
MS.gene045539.t1 MTR_8g009050 34.043 188 110 3 168 343 258 443 4.99e-23 100
MS.gene045539.t1 MTR_7g102560 30.916 262 154 4 109 344 201 461 6.28e-23 100
MS.gene045539.t1 MTR_8g012650 32.143 196 116 2 146 327 242 434 7.21e-23 100
MS.gene045539.t1 MTR_0078s0060 31.579 209 126 5 146 343 239 441 9.22e-23 99.8
MS.gene045539.t1 MTR_5g045960 31.718 227 136 5 157 367 264 487 1.03e-22 99.8
MS.gene045539.t1 MTR_4g485620 26.316 380 239 11 2 354 79 444 1.18e-22 99.4
MS.gene045539.t1 MTR_7g013240 35.625 160 98 3 169 328 252 406 1.21e-22 99.0
MS.gene045539.t1 MTR_8g012630 33.333 174 102 1 169 328 206 379 1.22e-22 99.0
MS.gene045539.t1 MTR_5g087620 25.886 367 238 9 27 365 136 496 1.42e-22 99.4
MS.gene045539.t1 MTR_4g485630 32.984 191 114 3 127 303 216 406 1.43e-22 99.0
MS.gene045539.t1 MTR_8g466240 27.036 307 193 9 18 303 99 395 1.92e-22 98.6
MS.gene045539.t1 MTR_7g070740 25.137 366 238 11 3 341 102 458 2.47e-22 98.6
MS.gene045539.t1 MTR_8g009055 30.242 248 154 5 117 347 202 447 2.48e-22 98.2
MS.gene045539.t1 MTR_8g027885 29.843 191 120 3 169 347 265 453 3.99e-22 97.8
MS.gene045539.t1 MTR_8g006730 34.444 180 105 3 169 335 260 439 4.93e-22 97.4
MS.gene045539.t1 MTR_6g488280 33.889 180 106 4 169 335 258 437 5.01e-22 97.4
MS.gene045539.t1 MTR_0428s0010 33.889 180 106 4 169 335 258 437 5.01e-22 97.4
MS.gene045539.t1 MTR_5g035580 31.148 183 118 3 162 344 257 431 5.04e-22 97.4
MS.gene045539.t1 MTR_1g019520 30.890 191 119 2 168 347 5 193 5.36e-22 93.6
MS.gene045539.t1 MTR_7g013260 33.146 178 109 4 169 346 253 420 7.54e-22 96.7
MS.gene045539.t1 MTR_6g033615 31.579 171 113 2 168 334 252 422 7.60e-22 97.1
MS.gene045539.t1 MTR_6g023665 33.333 180 107 4 169 335 265 444 7.91e-22 97.1
MS.gene045539.t1 MTR_8g064870 29.180 305 182 10 42 324 141 433 1.11e-21 96.7
MS.gene045539.t1 MTR_2g046750 25.549 364 236 11 23 367 120 467 1.29e-21 96.3
MS.gene045539.t1 MTR_5g035560 25.620 363 228 12 22 362 109 451 1.32e-21 96.3
MS.gene045539.t1 MTR_8g009073 28.517 263 164 6 121 366 77 332 1.70e-21 94.4
MS.gene045539.t1 MTR_4g117960 34.921 189 107 4 157 329 256 444 1.71e-21 95.9
MS.gene045539.t1 MTR_4g094920 31.000 200 131 4 169 362 281 479 1.96e-21 95.9
MS.gene045539.t1 MTR_7g046490 31.383 188 117 2 165 340 252 439 2.66e-21 95.1
MS.gene045539.t1 MTR_8g006710 33.333 180 107 4 169 335 259 438 2.69e-21 95.1
MS.gene045539.t1 MTR_4g095008 31.373 204 130 6 169 366 266 465 3.26e-21 95.5
MS.gene045539.t1 MTR_1g107350 27.859 341 207 12 11 327 106 431 3.46e-21 95.1
MS.gene045539.t1 MTR_0078s0010 31.892 185 114 3 169 343 260 442 3.47e-21 95.1
MS.gene045539.t1 MTR_6g033725 27.647 340 221 11 16 342 110 437 3.69e-21 95.1
MS.gene045539.t1 MTR_6g033675 27.941 340 221 9 16 342 112 440 3.81e-21 95.1
MS.gene045539.t1 MTR_4g128720 30.802 237 150 6 112 346 211 435 4.14e-21 94.7
MS.gene045539.t1 MTR_0288s0020 31.683 202 124 5 107 306 217 406 4.40e-21 94.7
MS.gene045539.t1 MTR_2g040530 27.198 364 231 11 2 346 100 448 4.55e-21 94.7
MS.gene045539.t1 MTR_0184s0040 30.159 189 120 3 169 347 275 461 5.39e-21 94.4
MS.gene045539.t1 MTR_0078s0190 30.159 189 120 3 169 347 275 461 5.39e-21 94.4
MS.gene045539.t1 MTR_7g070660 25.135 370 229 13 3 341 102 454 5.84e-21 94.4
MS.gene045539.t1 MTR_8g009073 28.626 262 163 6 121 365 206 460 5.98e-21 94.4
MS.gene045539.t1 MTR_7g102550 32.000 200 121 4 174 360 282 479 6.14e-21 94.4
MS.gene045539.t1 MTR_6g035185 32.292 192 113 4 168 343 269 459 6.75e-21 94.4
MS.gene045539.t1 MTR_8g012745 31.771 192 114 3 154 329 243 433 7.61e-21 94.0
MS.gene045539.t1 MTR_8g009067 30.208 192 122 2 168 349 140 329 7.71e-21 92.8
MS.gene045539.t1 MTR_7g070610 32.105 190 115 4 166 343 276 463 7.83e-21 94.0
MS.gene045539.t1 MTR_6g033625 25.994 327 215 9 16 327 113 427 8.67e-21 94.0
MS.gene045539.t1 MTR_8g077590 31.443 194 110 2 151 335 244 423 1.05e-20 93.6
MS.gene045539.t1 MTR_7g102520 33.333 192 116 3 164 344 276 466 1.12e-20 93.6
MS.gene045539.t1 MTR_3g049970 33.514 185 111 3 130 303 223 406 1.29e-20 93.2
MS.gene045539.t1 MTR_8g027870 28.796 191 122 3 169 347 265 453 1.35e-20 93.2
MS.gene045539.t1 MTR_8g006260 31.351 185 115 4 151 324 246 429 1.50e-20 93.2
MS.gene045539.t1 MTR_8g009067 30.208 192 122 2 168 349 258 447 2.18e-20 92.8
MS.gene045539.t1 MTR_2g059240 29.204 226 142 4 127 339 226 446 2.87e-20 92.4
MS.gene045539.t1 MTR_2g035040 32.240 183 108 4 168 335 174 355 3.05e-20 91.7
MS.gene045539.t1 MTR_4g117950 33.557 149 92 2 164 307 249 395 3.21e-20 92.0
MS.gene045539.t1 MTR_4g117980 32.222 180 107 3 168 332 269 448 3.88e-20 92.0
MS.gene045539.t1 MTR_1g107315 28.302 318 185 13 11 303 106 405 4.16e-20 92.0
MS.gene045539.t1 MTR_8g088560 31.068 206 132 5 162 363 259 458 4.29e-20 91.7
MS.gene045539.t1 MTR_1g107360 31.068 206 122 4 127 320 220 417 4.37e-20 91.7
MS.gene045539.t1 MTR_1g019510 29.319 191 122 2 168 347 256 444 4.58e-20 91.7
MS.gene045539.t1 MTR_0536s0010 30.645 186 113 3 164 335 263 446 1.10e-19 90.5
MS.gene045539.t1 MTR_8g006270 26.346 353 200 13 11 327 99 427 1.39e-19 90.1
MS.gene045539.t1 MTR_8g008990 31.222 221 133 5 144 347 231 449 1.43e-19 90.1
MS.gene045539.t1 MTR_7g047030 29.717 212 132 4 169 365 260 469 1.66e-19 90.1
MS.gene045539.t1 MTR_7g047270 29.717 212 132 4 169 365 260 469 1.66e-19 90.1
MS.gene045539.t1 MTR_1g032490 27.628 333 204 12 11 320 108 426 2.01e-19 89.7
MS.gene045539.t1 MTR_1g107375 32.571 175 108 3 169 343 266 430 2.04e-19 89.7
MS.gene045539.t1 MTR_3g009510 30.366 191 117 3 168 344 266 454 2.21e-19 89.7
MS.gene045539.t1 MTR_0536s0020 30.939 181 109 3 168 332 266 446 2.79e-19 89.4
MS.gene045539.t1 MTR_7g080940 25.429 350 218 9 15 344 104 430 3.29e-19 89.0
MS.gene045539.t1 MTR_7g070810 25.746 268 168 7 84 329 181 439 3.34e-19 89.4
MS.gene045539.t1 MTR_5g090580 26.493 268 165 6 116 355 204 467 3.39e-19 89.0
MS.gene045539.t1 MTR_4g117890 30.601 183 107 4 168 332 261 441 3.69e-19 89.0
MS.gene045539.t1 MTR_6g038220 26.536 358 215 13 20 357 109 438 3.98e-19 89.0
MS.gene045539.t1 MTR_8g056740 27.149 221 147 4 130 339 121 338 4.79e-19 88.2
MS.gene045539.t1 MTR_5g098930 28.708 209 128 5 158 346 244 451 4.83e-19 88.6
MS.gene045539.t1 MTR_5g070040 28.213 319 203 12 6 306 99 409 5.28e-19 88.6
MS.gene045539.t1 MTR_8g083280 34.091 176 104 5 169 342 272 437 5.73e-19 88.6
MS.gene045539.t1 MTR_8g083290 32.584 178 113 4 169 344 269 441 6.12e-19 88.2
MS.gene045539.t1 MTR_4g485640 30.000 220 134 6 109 311 388 604 6.28e-19 89.0
MS.gene045539.t1 MTR_7g070940 23.099 355 239 9 3 335 100 442 6.45e-19 88.2
MS.gene045539.t1 MTR_1g107285 32.632 190 105 5 127 303 220 399 6.98e-19 88.2
MS.gene045539.t1 MTR_5g019580 30.000 190 117 3 168 341 266 455 9.98e-19 87.8
MS.gene045539.t1 MTR_6g035265 29.891 184 113 3 168 335 260 443 1.02e-18 87.8
MS.gene045539.t1 MTR_6g014020 29.947 187 118 4 163 349 284 457 1.05e-18 87.8
MS.gene045539.t1 MTR_5g019580 30.000 190 117 3 168 341 290 479 1.15e-18 87.8
MS.gene045539.t1 MTR_6g038200 26.099 364 217 13 16 357 106 439 1.16e-18 87.4
MS.gene045539.t1 MTR_1g029540 31.795 195 115 4 125 304 206 397 1.24e-18 87.4
MS.gene045539.t1 MTR_6g038240 32.749 171 105 4 157 327 257 417 1.84e-18 87.0
MS.gene045539.t1 MTR_5g090610 27.536 276 166 9 109 355 183 453 1.96e-18 86.7
MS.gene045539.t1 MTR_8g008970 30.412 194 123 2 168 351 258 449 2.53e-18 87.0
MS.gene045539.t1 MTR_8g008970 31.481 162 104 2 168 328 597 752 2.12e-15 78.2
MS.gene045539.t1 MTR_6g038230 25.824 364 218 12 16 357 106 439 2.57e-18 86.3
MS.gene045539.t1 MTR_6g013900 33.562 146 91 3 163 306 283 424 2.58e-18 86.7
MS.gene045539.t1 MTR_8g465670 32.164 171 103 3 168 325 257 427 3.31e-18 86.3
MS.gene045539.t1 MTR_8g032950 32.308 195 115 5 157 335 256 449 3.32e-18 86.3
MS.gene045539.t1 MTR_7g012120 31.818 176 105 3 169 329 272 447 3.38e-18 86.3
MS.gene045539.t1 MTR_7g055710 28.947 190 122 4 163 341 271 458 3.85e-18 85.9
MS.gene045539.t1 MTR_7g470610 29.518 166 112 3 163 326 128 290 3.92e-18 84.3
MS.gene045539.t1 MTR_7g070583 29.518 166 112 3 163 326 128 290 3.92e-18 84.3
MS.gene045539.t1 MTR_8g009063 30.208 192 120 2 168 347 265 454 4.47e-18 85.9
MS.gene045539.t1 MTR_5g098960 35.795 176 98 7 169 341 262 425 4.49e-18 85.9
MS.gene045539.t1 MTR_7g080950 29.189 185 122 3 163 347 253 428 5.49e-18 85.5
MS.gene045539.t1 MTR_1g107380 30.723 166 110 4 169 332 279 441 5.66e-18 85.5
MS.gene045539.t1 MTR_5g090620 25.746 268 165 6 109 346 196 459 6.83e-18 85.1
MS.gene045539.t1 MTR_2g034990 31.694 183 109 4 168 335 269 450 7.15e-18 85.1
MS.gene045539.t1 MTR_7g071040 31.818 198 119 4 169 364 284 467 7.47e-18 85.1
MS.gene045539.t1 MTR_8g064880 27.243 301 190 9 22 303 122 412 7.80e-18 85.1
MS.gene045539.t1 MTR_7g080935 24.058 345 215 10 22 344 111 430 8.52e-18 84.7
MS.gene045539.t1 MTR_6g038300 29.947 187 120 4 158 344 258 433 8.70e-18 84.7
MS.gene045539.t1 MTR_3g084530 27.869 244 147 7 133 357 238 471 9.23e-18 84.7
MS.gene045539.t1 MTR_6g033660 30.682 176 118 2 169 342 266 439 9.50e-18 84.7
MS.gene045539.t1 MTR_4g128690 28.632 234 153 6 112 343 208 429 1.06e-17 84.7
MS.gene045539.t1 MTR_3g069710 26.953 256 170 7 118 362 202 451 1.35e-17 84.3
MS.gene045539.t1 MTR_4g008630 30.583 206 132 3 109 303 194 399 1.39e-17 84.3
MS.gene045539.t1 MTR_8g006220 30.726 179 103 3 168 325 256 434 1.49e-17 84.3
MS.gene045539.t1 MTR_5g090700 28.641 206 127 4 169 355 265 469 1.63e-17 84.0
MS.gene045539.t1 MTR_6g013440 27.542 236 149 6 107 328 217 444 1.72e-17 84.0
MS.gene045539.t1 MTR_3g084520 29.189 185 126 3 164 344 267 450 1.88e-17 84.0
MS.gene045539.t1 MTR_5g004940 28.030 264 161 7 113 365 139 384 2.01e-17 83.6
MS.gene045539.t1 MTR_2g035020 32.203 177 105 3 168 329 269 445 2.15e-17 84.0
MS.gene045539.t1 MTR_6g013920 29.348 184 115 4 163 346 283 451 2.28e-17 83.6
MS.gene045539.t1 MTR_8g074550 27.778 252 147 6 77 301 178 421 2.34e-17 83.6
MS.gene045539.t1 MTR_2g008210 31.638 177 114 4 169 344 284 454 2.62e-17 83.6
MS.gene045539.t1 MTR_5g090670 25.000 268 167 5 109 346 197 460 2.83e-17 83.6
MS.gene045539.t1 MTR_7g070800 28.421 190 123 4 163 341 263 450 2.89e-17 83.6
MS.gene045539.t1 MTR_3g084540 28.049 246 147 8 133 358 238 473 3.55e-17 83.2
MS.gene045539.t1 MTR_4g118000 32.432 148 93 2 168 310 257 402 4.06e-17 82.8
MS.gene045539.t1 MTR_6g014200 31.250 144 97 2 163 306 281 422 4.81e-17 82.8
MS.gene045539.t1 MTR_3g479610 30.435 138 95 1 169 306 122 258 7.75e-17 80.9
MS.gene045539.t1 MTR_3g079480 29.861 144 100 1 163 306 292 434 8.00e-17 82.0
MS.gene045539.t1 MTR_6g014170 31.250 144 97 2 163 306 266 407 8.57e-17 82.0
MS.gene045539.t1 MTR_4g108250 30.000 180 113 4 169 336 281 459 9.69e-17 82.0
MS.gene045539.t1 MTR_5g067170 30.319 188 116 3 157 329 256 443 1.00e-16 81.6
MS.gene045539.t1 MTR_0891s0010 29.710 138 96 1 169 306 99 235 1.16e-16 80.1
MS.gene045539.t1 MTR_5g040030 27.568 185 123 3 169 343 281 464 1.18e-16 81.6
MS.gene045539.t1 MTR_4g082810 26.621 293 177 10 11 293 131 395 1.29e-16 81.3
MS.gene045539.t1 MTR_7g070780 28.191 188 122 4 165 341 273 458 1.30e-16 81.6
MS.gene045539.t1 MTR_3g008010 32.143 140 89 3 169 306 288 423 1.32e-16 81.3
MS.gene045539.t1 MTR_6g014040 30.986 142 96 2 163 304 285 424 1.33e-16 81.3
MS.gene045539.t1 MTR_6g014310 28.037 214 136 5 107 306 217 426 1.58e-16 81.3
MS.gene045539.t1 MTR_5g090630 28.155 206 128 4 169 355 254 458 1.66e-16 80.9
MS.gene045539.t1 MTR_3g069690 27.074 229 151 5 125 343 204 426 1.71e-16 80.9
MS.gene045539.t1 MTR_3g479490 30.435 138 95 1 169 306 283 419 1.71e-16 80.9
MS.gene045539.t1 MTR_8g044140 27.311 238 147 4 125 336 185 422 3.19e-16 80.1
MS.gene045539.t1 MTR_5g029800 34.247 146 90 2 168 307 265 410 3.22e-16 80.1
MS.gene045539.t1 MTR_1g107365 28.571 210 121 5 127 320 251 447 3.62e-16 80.1
MS.gene045539.t1 MTR_8g090095 30.348 201 122 4 125 307 224 424 4.49e-16 79.7
MS.gene045539.t1 MTR_5g090660 27.184 206 130 4 169 355 261 465 4.80e-16 79.7
MS.gene045539.t1 MTR_6g014250 30.822 146 95 3 163 306 282 423 5.46e-16 79.3
MS.gene045539.t1 MTR_7g070910 29.891 184 116 4 169 341 278 459 5.82e-16 79.3
MS.gene045539.t1 MTR_7g071050 30.387 181 111 6 167 335 231 408 5.88e-16 79.3
MS.gene045539.t1 MTR_5g075440 24.793 242 161 4 117 347 205 436 6.96e-16 79.0
MS.gene045539.t1 MTR_6g014150 30.556 144 98 2 163 306 281 422 7.00e-16 79.3
MS.gene045539.t1 MTR_7g070860 27.128 188 114 3 163 341 264 437 8.30e-16 79.0
MS.gene045539.t1 MTR_4g082820 30.270 185 112 3 169 346 264 438 8.80e-16 79.0
MS.gene045539.t1 MTR_7g070930 30.435 184 115 4 169 341 281 462 8.92e-16 79.0
MS.gene045539.t1 MTR_6g014240 27.179 195 131 4 116 306 205 392 9.89e-16 78.6
MS.gene045539.t1 MTR_7g011470 25.620 242 156 6 116 343 207 438 1.37e-15 78.2
MS.gene045539.t1 MTR_7g011470 25.620 242 156 6 116 343 211 442 1.47e-15 78.2
MS.gene045539.t1 MTR_3g009490 32.121 165 96 4 194 344 4 166 1.51e-15 74.7
MS.gene045539.t1 MTR_1g040310 29.213 178 112 4 163 329 273 447 1.56e-15 78.2
MS.gene045539.t1 MTR_6g014190 29.167 144 100 2 163 306 91 232 1.62e-15 76.6
MS.gene045539.t1 MTR_8g007585 30.556 144 98 2 163 306 196 337 1.68e-15 77.8
MS.gene045539.t1 MTR_3g479520 25.743 202 142 4 169 369 292 486 3.10e-15 77.4
MS.gene045539.t1 MTR_6g014050 32.192 146 93 3 163 306 285 426 3.32e-15 77.0
MS.gene045539.t1 MTR_6g014220 31.034 145 96 3 163 306 282 423 3.62e-15 77.0
MS.gene045539.t1 MTR_5g090600 24.436 266 168 7 110 355 194 446 3.86e-15 77.0
MS.gene045539.t1 MTR_6g014270 26.415 212 142 4 107 306 215 424 4.28e-15 76.6
MS.gene045539.t1 MTR_6g014290 29.452 146 97 3 163 306 282 423 8.03e-15 75.9
MS.gene045539.t1 MTR_6g011340 29.861 144 99 2 163 306 284 425 8.76e-15 75.9
MS.gene045539.t1 MTR_6g013990 28.472 144 101 2 163 306 282 423 1.65e-14 75.1
MS.gene045539.t1 MTR_7g070870 25.962 208 142 4 116 312 212 418 1.72e-14 75.1
MS.gene045539.t1 MTR_5g058320 29.518 166 111 3 163 328 269 428 1.80e-14 74.7
MS.gene045539.t1 MTR_5g464760 31.618 136 91 2 169 304 290 423 2.33e-14 74.7
MS.gene045539.t1 MTR_5g070090 27.236 246 157 9 110 344 202 436 3.62e-14 73.9
MS.gene045539.t1 MTR_5g016480 31.343 134 90 2 169 301 275 407 3.64e-14 73.9
MS.gene045539.t1 MTR_6g035295 22.188 329 223 6 27 330 129 449 4.98e-14 73.6
MS.gene045539.t1 MTR_8g059425 25.616 203 133 5 118 306 225 423 5.10e-14 73.6
MS.gene045539.t1 MTR_2086s0010 30.973 113 77 1 194 306 6 117 5.59e-14 70.1
MS.gene045539.t1 MTR_1996s0010 30.973 113 77 1 194 306 6 117 5.59e-14 70.1
MS.gene045539.t1 MTR_6g013450 29.861 144 99 2 163 306 285 426 6.12e-14 73.2
MS.gene045539.t1 MTR_7g080900 30.573 157 102 2 169 325 266 415 7.55e-14 72.8
MS.gene045539.t1 MTR_0477s0010 30.137 146 96 3 163 306 121 262 1.05e-13 71.6
MS.gene045539.t1 MTR_4g094220 30.986 142 91 3 168 306 287 424 1.46e-13 72.0
MS.gene045539.t1 MTR_5g016660 23.038 395 254 14 6 365 104 483 2.20e-13 71.6
MS.gene045539.t1 MTR_8g028755 25.468 267 155 9 72 335 9 234 2.39e-13 69.3
MS.gene045539.t1 MTR_5g072820 25.620 242 152 5 117 344 199 426 2.66e-13 71.2
MS.gene045539.t1 MTR_5g464810 31.618 136 91 2 169 304 288 421 3.12e-13 71.2
MS.gene045539.t1 MTR_5g064240 31.618 136 91 2 169 304 288 421 3.12e-13 71.2
MS.gene045539.t1 MTR_3g479470 28.986 138 96 2 169 306 290 425 3.23e-13 71.2
MS.gene045539.t1 MTR_4g064987 29.500 200 119 7 125 307 202 396 3.70e-13 70.9
MS.gene045539.t1 MTR_4g064987 29.500 200 119 7 125 307 208 402 4.15e-13 70.5
MS.gene045539.t1 MTR_8g009840 27.111 225 137 6 125 328 273 491 4.44e-13 70.9
MS.gene045539.t1 MTR_7g039550 25.217 230 156 5 109 329 3 225 6.04e-13 68.9
MS.gene045539.t1 MTR_6g013960 27.083 144 103 2 163 306 284 425 7.01e-13 70.1
MS.gene045539.t1 MTR_0036s0220 29.577 142 98 2 163 304 282 421 2.30e-12 68.6
MS.gene045539.t1 MTR_6g014187 28.767 146 98 3 163 306 284 425 2.36e-12 68.6
MS.gene045539.t1 MTR_5g072860 23.105 277 181 6 82 344 185 443 5.94e-12 67.0
MS.gene045539.t1 MTR_5g031860 26.163 172 121 2 162 333 275 440 7.03e-12 67.0
MS.gene045539.t1 MTR_6g014300 28.346 127 85 3 182 306 289 411 7.91e-12 66.6
MS.gene045539.t1 MTR_5g031840 27.326 172 119 2 162 333 267 432 9.74e-12 66.6
MS.gene045539.t1 MTR_8g043470 27.536 138 98 2 169 306 188 323 1.45e-11 65.5
MS.gene045539.t1 MTR_5g031830 26.452 155 111 1 162 316 276 427 2.22e-11 65.5
MS.gene045539.t1 MTR_5g072830 23.333 240 156 5 117 342 199 424 4.67e-11 64.3
MS.gene045539.t1 MTR_5g039900 19.891 367 248 7 3 336 104 457 9.36e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene045539.t1 AT5G54010 42.779 367 201 3 2 367 90 448 3.85e-112 335
MS.gene045539.t1 AT4G27570 42.742 372 197 4 1 368 90 449 4.23e-111 332
MS.gene045539.t1 AT4G27560 42.204 372 199 4 1 368 90 449 1.12e-108 326
MS.gene045539.t1 AT5G54060 45.187 374 194 6 2 367 97 467 6.62e-107 322
MS.gene045539.t1 AT5G53990 42.162 370 191 4 2 366 90 441 4.23e-104 314
MS.gene045539.t1 AT2G22930 41.962 367 190 4 3 364 91 439 5.33e-103 311
MS.gene045539.t1 AT3G29630 40.162 371 204 5 3 369 91 447 8.05e-102 308
MS.gene045539.t1 AT1G64920 41.192 369 198 4 3 366 91 445 4.86e-101 306
MS.gene045539.t1 AT1G64910 39.837 369 207 3 3 370 91 445 1.91e-99 302
MS.gene045539.t1 AT4G09500 39.782 367 198 5 3 364 91 439 2.70e-98 299
MS.gene045539.t1 AT3G29630 39.402 368 185 6 3 369 91 421 3.87e-95 290
MS.gene045539.t1 AT1G50580 37.500 368 208 5 1 363 89 439 3.33e-89 276
MS.gene045539.t1 AT4G09500 37.978 366 181 6 3 364 91 414 1.38e-88 273
MS.gene045539.t1 AT2G22590 32.267 375 228 14 3 362 103 466 1.98e-46 165
MS.gene045539.t1 AT5G49690 31.200 375 228 12 2 363 95 452 5.99e-45 160
MS.gene045539.t1 AT5G65550 31.421 366 225 12 19 368 110 465 1.17e-43 157
MS.gene045539.t1 AT2G31790 27.649 387 238 11 2 362 86 456 1.75e-28 115
MS.gene045539.t1 AT2G31750 27.411 394 234 11 8 370 90 462 3.29e-28 115
MS.gene045539.t1 AT2G31750 27.720 386 227 11 8 362 90 454 7.77e-28 114
MS.gene045539.t1 AT1G73880 30.612 245 158 4 131 367 228 468 1.93e-26 110
MS.gene045539.t1 AT2G18570 29.084 251 153 5 112 342 197 442 3.08e-25 106
MS.gene045539.t1 AT1G05675 36.207 174 103 3 169 342 263 428 4.04e-25 106
MS.gene045539.t1 AT2G36780 32.468 231 134 4 127 335 228 458 1.22e-24 105
MS.gene045539.t1 AT4G34131 34.807 181 110 3 169 344 281 458 1.39e-24 105
MS.gene045539.t1 AT1G05680 35.057 174 105 3 169 342 263 428 1.61e-24 104
MS.gene045539.t1 AT4G36770 33.831 201 117 4 169 354 256 455 7.65e-24 102
MS.gene045539.t1 AT1G51210 31.183 186 113 2 125 303 220 397 1.08e-23 102
MS.gene045539.t1 AT5G12890 28.000 250 166 5 108 345 211 458 1.39e-23 102
MS.gene045539.t1 AT5G03490 29.646 226 140 4 125 343 225 438 2.34e-23 101
MS.gene045539.t1 AT2G29730 35.359 181 106 4 169 345 268 441 7.65e-23 99.8
MS.gene045539.t1 AT5G59590 29.200 250 165 6 120 362 205 449 1.42e-22 99.0
MS.gene045539.t1 AT2G36760 32.663 199 119 4 157 344 269 463 1.49e-22 99.4
MS.gene045539.t1 AT5G59580 28.295 258 173 6 113 363 196 448 1.70e-22 98.6
MS.gene045539.t1 AT3G53150 31.276 243 140 5 112 327 219 461 3.20e-22 98.2
MS.gene045539.t1 AT4G34135 35.185 162 97 2 169 324 282 441 3.21e-22 98.2
MS.gene045539.t1 AT2G15480 24.370 357 240 7 8 344 114 460 4.62e-22 97.8
MS.gene045539.t1 AT2G18560 28.141 199 129 3 153 342 159 352 5.50e-22 96.7
MS.gene045539.t1 AT2G29710 31.429 245 151 6 112 345 203 441 6.00e-22 97.4
MS.gene045539.t1 AT2G16890 30.045 223 141 6 130 344 229 444 6.01e-22 97.4
MS.gene045539.t1 AT2G36770 33.333 192 113 4 169 349 281 468 1.05e-21 96.7
MS.gene045539.t1 AT3G46670 29.583 240 155 7 112 345 196 427 1.70e-21 95.9
MS.gene045539.t1 AT2G15480 32.692 208 130 4 169 370 281 484 3.10e-21 95.1
MS.gene045539.t1 AT4G34138 28.148 270 171 4 113 364 212 476 3.56e-21 95.1
MS.gene045539.t1 AT1G07250 30.303 264 169 7 115 364 212 474 4.17e-21 94.7
MS.gene045539.t1 AT3G16520 27.686 242 164 4 93 326 186 424 5.51e-21 94.4
MS.gene045539.t1 AT3G16520 27.686 242 164 4 93 326 186 424 5.80e-21 94.4
MS.gene045539.t1 AT3G16520 27.686 242 164 4 93 326 186 424 5.88e-21 94.4
MS.gene045539.t1 AT2G36800 34.536 194 108 5 157 335 268 457 8.67e-21 94.0
MS.gene045539.t1 AT3G53160 30.806 211 129 4 160 357 266 472 1.08e-20 93.6
MS.gene045539.t1 AT3G46660 32.828 198 119 7 153 345 246 434 1.84e-20 92.8
MS.gene045539.t1 AT2G15490 28.125 256 167 3 130 370 228 481 2.21e-20 92.8
MS.gene045539.t1 AT2G16890 30.500 200 126 5 130 321 229 423 2.98e-20 92.0
MS.gene045539.t1 AT2G36750 32.086 187 112 3 169 344 276 458 3.16e-20 92.4
MS.gene045539.t1 AT1G10400 25.926 378 236 15 8 359 104 463 3.96e-20 92.0
MS.gene045539.t1 AT2G15490 28.185 259 166 4 130 370 228 484 4.86e-20 91.7
MS.gene045539.t1 AT4G01070 30.645 186 116 3 169 343 261 444 8.52e-20 90.9
MS.gene045539.t1 AT1G01420 27.083 288 177 6 68 343 177 443 9.22e-20 90.9
MS.gene045539.t1 AT1G01420 27.083 288 177 6 68 343 180 446 9.86e-20 90.9
MS.gene045539.t1 AT5G14860 28.226 248 155 9 130 360 236 477 1.22e-19 90.5
MS.gene045539.t1 AT2G36970 29.614 233 153 6 117 345 224 449 1.74e-19 90.1
MS.gene045539.t1 AT3G21790 27.839 273 173 6 113 362 207 478 2.41e-19 89.7
MS.gene045539.t1 AT4G15280 29.614 233 139 6 155 367 280 507 3.04e-19 89.4
MS.gene045539.t1 AT4G15280 29.614 233 139 6 155 367 248 475 3.23e-19 89.4
MS.gene045539.t1 AT3G50740 25.984 254 168 4 100 335 194 445 4.93e-19 88.6
MS.gene045539.t1 AT2G29740 30.317 221 142 6 119 328 221 440 6.33e-19 88.2
MS.gene045539.t1 AT5G26310 27.437 277 174 6 112 364 193 466 6.50e-19 88.2
MS.gene045539.t1 AT3G21760 27.586 261 162 7 112 347 207 465 8.62e-19 88.2
MS.gene045539.t1 AT4G15260 27.650 217 135 4 169 367 144 356 9.90e-19 87.0
MS.gene045539.t1 AT5G38040 28.175 252 165 7 120 362 205 449 9.98e-19 87.8
MS.gene045539.t1 AT5G05870 27.652 264 171 9 116 367 204 459 1.68e-18 87.0
MS.gene045539.t1 AT4G15500 32.867 143 92 2 163 305 263 401 2.01e-18 87.0
MS.gene045539.t1 AT3G11340 26.778 239 160 6 116 345 195 427 2.35e-18 86.7
MS.gene045539.t1 AT3G21800 28.512 242 152 6 109 335 199 434 3.87e-18 85.9
MS.gene045539.t1 AT3G21780 26.259 278 182 6 109 364 194 470 4.11e-18 85.9
MS.gene045539.t1 AT4G15480 33.099 142 92 3 164 303 275 415 4.50e-18 85.9
MS.gene045539.t1 AT1G07240 32.057 209 128 6 137 334 242 447 4.78e-18 85.9
MS.gene045539.t1 AT1G06000 26.389 288 178 7 68 321 105 392 6.86e-18 85.1
MS.gene045539.t1 AT5G66690 27.273 253 160 5 112 343 193 442 9.24e-18 85.1
MS.gene045539.t1 AT4G14090 29.442 197 130 5 163 356 255 445 1.88e-17 84.0
MS.gene045539.t1 AT2G29750 33.696 184 104 5 157 336 265 434 2.36e-17 83.6
MS.gene045539.t1 AT2G30150 26.718 262 168 7 117 366 191 440 2.50e-17 83.6
MS.gene045539.t1 AT3G21560 34.286 140 86 3 169 307 279 413 2.58e-17 83.6
MS.gene045539.t1 AT2G30150 26.718 262 168 7 117 366 207 456 2.87e-17 83.2
MS.gene045539.t1 AT1G07260 29.108 213 139 5 146 347 245 456 7.29e-17 82.0
MS.gene045539.t1 AT5G38010 28.571 252 164 7 120 362 209 453 8.36e-17 82.0
MS.gene045539.t1 AT2G36790 34.021 194 109 4 157 335 268 457 8.56e-17 82.0
MS.gene045539.t1 AT2G30140 24.260 338 234 7 15 344 106 429 8.98e-17 82.0
MS.gene045539.t1 AT3G21750 30.000 190 116 4 169 346 257 441 1.10e-16 81.6
MS.gene045539.t1 AT2G43820 30.000 200 126 5 169 363 257 447 1.29e-16 81.3
MS.gene045539.t1 AT4G15490 30.370 135 90 2 169 303 273 403 1.66e-16 81.3
MS.gene045539.t1 AT3G22250 34.940 166 89 6 169 328 276 428 3.38e-16 80.1
MS.gene045539.t1 AT2G30140 24.484 339 231 9 15 344 106 428 4.43e-16 79.7
MS.gene045539.t1 AT1G78270 27.746 173 117 3 133 303 256 422 4.46e-16 79.7
MS.gene045539.t1 AT1G30530 27.969 261 171 7 112 367 204 452 5.40e-16 79.3
MS.gene045539.t1 AT1G01390 29.167 192 119 3 152 328 242 431 6.01e-16 79.3
MS.gene045539.t1 AT1G01390 29.167 192 119 3 152 328 259 448 6.85e-16 79.3
MS.gene045539.t1 AT5G05880 28.643 199 129 5 120 307 203 399 8.89e-16 79.0
MS.gene045539.t1 AT3G46700 25.926 270 168 8 112 367 191 442 1.20e-15 78.6
MS.gene045539.t1 AT2G22930 31.852 135 70 3 3 133 91 207 1.46e-15 76.6
MS.gene045539.t1 AT2G22930 39.506 81 49 0 284 364 207 287 1.10e-14 74.3
MS.gene045539.t1 AT3G46680 27.823 248 160 7 112 353 197 431 1.63e-15 78.2
MS.gene045539.t1 AT2G43840 28.500 200 129 5 169 363 257 447 1.65e-15 78.2
MS.gene045539.t1 AT2G43840 28.500 200 129 5 169 363 257 447 1.69e-15 77.8
MS.gene045539.t1 AT5G05860 26.531 245 154 6 120 344 202 440 1.83e-15 77.8
MS.gene045539.t1 AT1G22360 30.682 176 114 4 169 344 287 454 2.24e-15 77.8
MS.gene045539.t1 AT1G22360 32.609 138 91 2 169 306 287 422 3.19e-15 77.0
MS.gene045539.t1 AT5G05890 26.601 203 140 4 109 304 196 396 4.30e-15 76.6
MS.gene045539.t1 AT3G46690 29.146 199 132 6 112 303 196 392 4.67e-15 76.6
MS.gene045539.t1 AT3G55710 34.532 139 87 3 169 305 263 399 5.29e-15 76.6
MS.gene045539.t1 AT2G23250 33.793 145 91 3 162 306 237 376 5.62e-15 76.3
MS.gene045539.t1 AT1G22400 33.094 139 89 3 169 306 291 426 7.73e-15 76.3
MS.gene045539.t1 AT1G05560 25.833 240 139 8 146 359 276 502 8.90e-15 75.9
MS.gene045539.t1 AT5G17050 27.225 191 123 5 154 344 260 434 1.23e-14 75.5
MS.gene045539.t1 AT1G05560 25.833 240 139 8 146 359 226 452 1.27e-14 75.5
MS.gene045539.t1 AT2G28080 28.873 142 100 1 169 310 281 421 2.97e-14 74.3
MS.gene045539.t1 AT5G17030 24.521 261 180 7 112 366 207 456 3.14e-14 74.3
MS.gene045539.t1 AT1G22380 31.884 138 92 2 169 306 290 425 4.29e-14 73.9
MS.gene045539.t1 AT5G05900 27.322 183 121 4 127 304 216 391 5.90e-14 73.2
MS.gene045539.t1 AT1G24100 27.000 200 134 5 169 367 268 456 6.81e-14 73.2
MS.gene045539.t1 AT4G15550 28.634 227 147 7 127 344 231 451 6.98e-14 73.2
MS.gene045539.t1 AT3G02100 30.337 178 107 5 169 346 279 439 7.01e-14 73.2
MS.gene045539.t1 AT1G22340 28.777 139 96 2 169 306 290 426 8.52e-14 72.8
MS.gene045539.t1 AT2G23260 29.480 173 116 4 169 340 262 429 9.18e-14 72.8
MS.gene045539.t1 AT3G55700 27.536 207 128 5 156 359 245 432 1.36e-13 72.4
MS.gene045539.t1 AT1G05530 27.869 183 121 3 169 344 254 432 2.72e-13 71.2
MS.gene045539.t1 AT1G22370 26.471 204 132 4 114 306 54 250 6.07e-13 69.3
MS.gene045539.t1 AT2G26480 25.431 232 151 8 131 353 209 427 1.46e-12 68.9
MS.gene045539.t1 AT1G22370 26.471 204 132 4 114 306 224 420 1.89e-12 68.9
MS.gene045539.t1 AT3G46720 28.736 174 113 3 163 336 250 412 2.27e-12 68.6
MS.gene045539.t1 AT5G17040 26.000 200 136 5 169 367 253 441 2.12e-11 65.5
MS.gene045539.t1 AT5G17040 25.701 214 142 6 155 367 142 339 2.19e-11 65.1
MS.gene045539.t1 AT3G46650 27.363 201 138 5 112 306 180 378 5.51e-11 64.3

Find 61 sgRNAs with CRISPR-Local

Find 75 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTCATCCAAAACAGAATT+TGG 0.066775 4.2:-30987485 None:intergenic
ACCCTTTCCGAAAACCTTTC+TGG 0.118748 4.2:-30987689 None:intergenic
ATTAATTCTTGAAATGTATT+TGG 0.171443 4.2:-30987584 None:intergenic
GGTTCAGCAACAATTGATTT+TGG 0.174430 4.2:+30987742 MS.gene045539:CDS
GAAGGAAGAGGTGTTGTTTA+TGG 0.254621 4.2:+30987713 MS.gene045539:CDS
TGAAAACCCAAATTCTGTTT+TGG 0.266973 4.2:+30987478 MS.gene045539:CDS
ACATTTCAAGAATTAATTCT+TGG 0.283231 4.2:+30987590 MS.gene045539:CDS
CTAAAGCCTTTGCAGCTAAA+AGG 0.291713 4.2:+30987288 MS.gene045539:CDS
TTCATTACACATTGTGGTTC+AGG 0.292499 4.2:+30987785 MS.gene045539:CDS
GCAGCTTTGAAACCTCCTTT+TGG 0.302532 4.2:+30987641 MS.gene045539:CDS
GATCTCATGGAACCTCCTTC+TGG 0.333353 4.2:+30987227 MS.gene045539:CDS
TCAGTTGTTTATTGTTGTTT+TGG 0.335096 4.2:+30987542 MS.gene045539:CDS
ATTCTTGGTCTTGAGTTAAC+TGG 0.339940 4.2:+30987605 MS.gene045539:CDS
GAGGTGTTGTTTATGGTGGT+TGG 0.345051 4.2:+30987720 MS.gene045539:CDS
AATAAACCAGTTCTTACTTC+AGG 0.346458 4.2:+30987443 MS.gene045539:CDS
TTGCACTGCTAGTTCGGTTA+TGG 0.359471 4.2:+30987148 MS.gene045539:CDS
TCATCCTAGCATTCAATATC+TGG 0.366837 4.2:-30987868 None:intergenic
TCTCATCCAAAACAGAATTT+GGG 0.385389 4.2:-30987484 None:intergenic
TAAAGCTTGATAGATGAATC+AGG 0.386642 4.2:-30987254 None:intergenic
AGGTGTTGTTTATGGTGGTT+GGG 0.398981 4.2:+30987721 MS.gene045539:CDS
TCATTATTGCACTGCTAGTT+CGG 0.399032 4.2:+30987142 MS.gene045539:CDS
CCATCTATAACAAAACGTTT+AGG 0.402151 4.2:+30987107 MS.gene045539:CDS
AATATCTGGTCACCAACATT+TGG 0.402404 4.2:-30987854 None:intergenic
AGGTTCCATGAGATCAAATT+CGG 0.435785 4.2:-30987219 None:intergenic
TTGAAGAAGCATTGCCAGAA+AGG 0.436652 4.2:+30987675 MS.gene045539:CDS
TTTAACCGAATTTGATCTCA+TGG 0.441041 4.2:+30987214 MS.gene045539:CDS
GATATTGAATGCTAGGATGA+TGG 0.442767 4.2:+30987871 MS.gene045539:CDS
ATGAAATTAGTAAGACAGTA+AGG 0.443024 4.2:+30987996 MS.gene045539:CDS
AACACCAGCTAGATATTCAA+TGG 0.456047 4.2:+30987184 MS.gene045539:CDS
ATGAATGAAGCTGATGCATT+AGG 0.462647 4.2:+30987362 MS.gene045539:CDS
AAGCTTCAAGAGATTGTTGA+AGG 0.463718 4.2:+30988094 MS.gene045539:CDS
TCAATTGTTTCGAATCCAAA+AGG 0.468326 4.2:-30987656 None:intergenic
TCGGAAAGGGTTGAAGGAAG+AGG 0.470087 4.2:+30987701 MS.gene045539:CDS
ACTAGTCCTGAAGTAAGAAC+TGG 0.484585 4.2:-30987449 None:intergenic
TTTCCCATTGAATATCTAGC+TGG 0.489160 4.2:-30987188 None:intergenic
TGGATGAGAAGTGGGCTACA+TGG 0.504868 4.2:+30987498 MS.gene045539:CDS
AGGTTCTTTATCAGAGGCAT+TGG 0.508110 4.2:+30987805 MS.gene045539:CDS
GAGAAGTGGGCTACATGGCT+TGG 0.536470 4.2:+30987503 MS.gene045539:CDS
ATATTGAATGCTAGGATGAT+GGG 0.538102 4.2:+30987872 MS.gene045539:CDS
GTGACCAGATATTGAATGCT+AGG 0.538541 4.2:+30987864 MS.gene045539:CDS
ACTGCTAGTTCGGTTATGGT+TGG 0.542853 4.2:+30987152 MS.gene045539:CDS
ACACCAGCTAGATATTCAAT+GGG 0.545820 4.2:+30987185 MS.gene045539:CDS
TGGTTCAGGTTCTTTATCAG+AGG 0.546855 4.2:+30987799 MS.gene045539:CDS
AGAACATGCAGAGAGATTGA+AGG 0.551914 4.2:+30987389 MS.gene045539:CDS
GGATGTTTCATTACACATTG+TGG 0.554201 4.2:+30987779 MS.gene045539:CDS
GAAGTTGAGAAAGATGAAGA+TGG 0.563294 4.2:+30987917 MS.gene045539:CDS
GGAAGAGGTGTTGTTTATGG+TGG 0.567575 4.2:+30987716 MS.gene045539:CDS
ATGGGAAACAACTTGAAAGT+TGG 0.577450 4.2:+30987890 MS.gene045539:CDS
AAGTGGGCTACATGGCTTGG+TGG 0.583208 4.2:+30987506 MS.gene045539:CDS
TTATGTACGTAATCAAGATA+AGG 0.587959 4.2:-30987413 None:intergenic
TGAAATTAGTAAGACAGTAA+GGG 0.589536 4.2:+30987997 MS.gene045539:CDS
ATTGTTTCGAATCCAAAAGG+AGG 0.604163 4.2:-30987653 None:intergenic
GAACATGCAGAGAGATTGAA+GGG 0.608596 4.2:+30987390 MS.gene045539:CDS
TCCACACATCATGACAGCAA+TGG 0.616562 4.2:+30987004 None:intergenic
AAAGCTTGATAGATGAATCA+GGG 0.619210 4.2:-30987253 None:intergenic
GATGAATCAGGGTAACCAGA+AGG 0.626995 4.2:-30987242 None:intergenic
GTAATGAAACATCCCACAGA+AGG 0.631699 4.2:-30987770 None:intergenic
AAATCATAGAAAACAATGTG+AGG 0.666418 4.2:-30987071 None:intergenic
AAACAACTTGAAAGTTGGTG+TGG 0.672740 4.2:+30987895 MS.gene045539:CDS
GAATCAGGGTAACCAGAAGG+AGG 0.685270 4.2:-30987239 None:intergenic
GAGCATTGTGATGAATGATG+AGG 0.729336 4.2:+30987973 MS.gene045539:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATTCTTGAAATGTATT+TGG - chr4.2:30987587-30987606 None:intergenic 15.0%
!! ACATTTCAAGAATTAATTCT+TGG + chr4.2:30987590-30987609 MS.gene045539:CDS 20.0%
!!! TTTTCTATGATTTTACTCAT+TGG + chr4.2:30987081-30987100 MS.gene045539:CDS 20.0%
! AAATCATAGAAAACAATGTG+AGG - chr4.2:30987074-30987093 None:intergenic 25.0%
! ATGAAATTAGTAAGACAGTA+AGG + chr4.2:30987996-30988015 MS.gene045539:CDS 25.0%
! TGAAATTAGTAAGACAGTAA+GGG + chr4.2:30987997-30988016 MS.gene045539:CDS 25.0%
! TTATGTACGTAATCAAGATA+AGG - chr4.2:30987416-30987435 None:intergenic 25.0%
!!! GCTAAAAGGAAAGAATTTTT+TGG + chr4.2:30987302-30987321 MS.gene045539:CDS 25.0%
!!! TCAGTTGTTTATTGTTGTTT+TGG + chr4.2:30987542-30987561 MS.gene045539:CDS 25.0%
AAAGCTTGATAGATGAATCA+GGG - chr4.2:30987256-30987275 None:intergenic 30.0%
AATAAACCAGTTCTTACTTC+AGG + chr4.2:30987443-30987462 MS.gene045539:CDS 30.0%
ATATTGAATGCTAGGATGAT+GGG + chr4.2:30987872-30987891 MS.gene045539:CDS 30.0%
CCATCTATAACAAAACGTTT+AGG + chr4.2:30987107-30987126 MS.gene045539:CDS 30.0%
TAAAGCTTGATAGATGAATC+AGG - chr4.2:30987257-30987276 None:intergenic 30.0%
TCAATTGTTTCGAATCCAAA+AGG - chr4.2:30987659-30987678 None:intergenic 30.0%
TCTCATCCAAAACAGAATTT+GGG - chr4.2:30987487-30987506 None:intergenic 30.0%
TTCTCATCCAAAACAGAATT+TGG - chr4.2:30987488-30987507 None:intergenic 30.0%
TTTAACCGAATTTGATCTCA+TGG + chr4.2:30987214-30987233 MS.gene045539:CDS 30.0%
! GCAATGTTCTTTTCTATGAT+CGG + chr4.2:30987327-30987346 MS.gene045539:CDS 30.0%
! TGAAAACCCAAATTCTGTTT+TGG + chr4.2:30987478-30987497 MS.gene045539:CDS 30.0%
! TTGGAAGTGAATGTGTTTTA+AGG + chr4.2:30987561-30987580 MS.gene045539:CDS 30.0%
!! CCTAAACGTTTTGTTATAGA+TGG - chr4.2:30987110-30987129 None:intergenic 30.0%
!!! TTAGTTTTGTTGCCAAATGT+TGG + chr4.2:30987842-30987861 MS.gene045539:CDS 30.0%
AACACCAGCTAGATATTCAA+TGG + chr4.2:30987184-30987203 MS.gene045539:CDS 35.0%
AAGCTTCAAGAGATTGTTGA+AGG + chr4.2:30988094-30988113 MS.gene045539:CDS 35.0%
AATATCTGGTCACCAACATT+TGG - chr4.2:30987857-30987876 None:intergenic 35.0%
ACACCAGCTAGATATTCAAT+GGG + chr4.2:30987185-30987204 MS.gene045539:CDS 35.0%
AGGTTCCATGAGATCAAATT+CGG - chr4.2:30987222-30987241 None:intergenic 35.0%
ATGAATGAAGCTGATGCATT+AGG + chr4.2:30987362-30987381 MS.gene045539:CDS 35.0%
ATGGGAAACAACTTGAAAGT+TGG + chr4.2:30987890-30987909 MS.gene045539:CDS 35.0%
ATTGTTTCGAATCCAAAAGG+AGG - chr4.2:30987656-30987675 None:intergenic 35.0%
GAAGTTGAGAAAGATGAAGA+TGG + chr4.2:30987917-30987936 MS.gene045539:CDS 35.0%
GATATTGAATGCTAGGATGA+TGG + chr4.2:30987871-30987890 MS.gene045539:CDS 35.0%
GGATGTTTCATTACACATTG+TGG + chr4.2:30987779-30987798 MS.gene045539:CDS 35.0%
TCATCCTAGCATTCAATATC+TGG - chr4.2:30987871-30987890 None:intergenic 35.0%
TCATTATTGCACTGCTAGTT+CGG + chr4.2:30987142-30987161 MS.gene045539:CDS 35.0%
TTCATTACACATTGTGGTTC+AGG + chr4.2:30987785-30987804 MS.gene045539:CDS 35.0%
TTTCCCATTGAATATCTAGC+TGG - chr4.2:30987191-30987210 None:intergenic 35.0%
!! AAACAACTTGAAAGTTGGTG+TGG + chr4.2:30987895-30987914 MS.gene045539:CDS 35.0%
!! ATTCTGTTTTGGATGAGAAG+TGG + chr4.2:30987489-30987508 MS.gene045539:CDS 35.0%
!! ATTCTTGGTCTTGAGTTAAC+TGG + chr4.2:30987605-30987624 MS.gene045539:CDS 35.0%
!! GGTTCAGCAACAATTGATTT+TGG + chr4.2:30987742-30987761 MS.gene045539:CDS 35.0%
!! TTCTGTTTTGGATGAGAAGT+GGG + chr4.2:30987490-30987509 MS.gene045539:CDS 35.0%
!! TTCTTTCCTTTTAGCTGCAA+AGG - chr4.2:30987297-30987316 None:intergenic 35.0%
!!! ATTTTGGAACATCCTTCTGT+GGG + chr4.2:30987758-30987777 MS.gene045539:CDS 35.0%
ACTAGTCCTGAAGTAAGAAC+TGG - chr4.2:30987452-30987471 None:intergenic 40.0%
AGAACATGCAGAGAGATTGA+AGG + chr4.2:30987389-30987408 MS.gene045539:CDS 40.0%
CTAAAGCCTTTGCAGCTAAA+AGG + chr4.2:30987288-30987307 MS.gene045539:CDS 40.0%
GAACATGCAGAGAGATTGAA+GGG + chr4.2:30987390-30987409 MS.gene045539:CDS 40.0%
GTAATGAAACATCCCACAGA+AGG - chr4.2:30987773-30987792 None:intergenic 40.0%
GTGACCAGATATTGAATGCT+AGG + chr4.2:30987864-30987883 MS.gene045539:CDS 40.0%
! AGCATTGCCAGAAAGGTTTT+CGG + chr4.2:30987682-30987701 MS.gene045539:CDS 40.0%
! AGGTTCTTTATCAGAGGCAT+TGG + chr4.2:30987805-30987824 MS.gene045539:CDS 40.0%
! GAGCATTGTGATGAATGATG+AGG + chr4.2:30987973-30987992 MS.gene045539:CDS 40.0%
! TGGTTCAGGTTCTTTATCAG+AGG + chr4.2:30987799-30987818 MS.gene045539:CDS 40.0%
!! AGGTGTTGTTTATGGTGGTT+GGG + chr4.2:30987721-30987740 MS.gene045539:CDS 40.0%
!! GAAGGAAGAGGTGTTGTTTA+TGG + chr4.2:30987713-30987732 MS.gene045539:CDS 40.0%
!! TTGAAGAAGCATTGCCAGAA+AGG + chr4.2:30987675-30987694 MS.gene045539:CDS 40.0%
!!! GATTTTGGAACATCCTTCTG+TGG + chr4.2:30987757-30987776 MS.gene045539:CDS 40.0%
ACCCTTTCCGAAAACCTTTC+TGG - chr4.2:30987692-30987711 None:intergenic 45.0%
ACTGCTAGTTCGGTTATGGT+TGG + chr4.2:30987152-30987171 MS.gene045539:CDS 45.0%
GATGAATCAGGGTAACCAGA+AGG - chr4.2:30987245-30987264 None:intergenic 45.0%
TTGCACTGCTAGTTCGGTTA+TGG + chr4.2:30987148-30987167 MS.gene045539:CDS 45.0%
! AGGTTTTCGGAAAGGGTTGA+AGG + chr4.2:30987695-30987714 MS.gene045539:CDS 45.0%
! GCCAGAAAGGTTTTCGGAAA+GGG + chr4.2:30987688-30987707 MS.gene045539:CDS 45.0%
! TGCCAGAAAGGTTTTCGGAA+AGG + chr4.2:30987687-30987706 MS.gene045539:CDS 45.0%
!! GAGGTGTTGTTTATGGTGGT+TGG + chr4.2:30987720-30987739 MS.gene045539:CDS 45.0%
!! GGAAGAGGTGTTGTTTATGG+TGG + chr4.2:30987716-30987735 MS.gene045539:CDS 45.0%
!!! GCAGCTTTGAAACCTCCTTT+TGG + chr4.2:30987641-30987660 MS.gene045539:CDS 45.0%
GAATCAGGGTAACCAGAAGG+AGG - chr4.2:30987242-30987261 None:intergenic 50.0%
GATCTCATGGAACCTCCTTC+TGG + chr4.2:30987227-30987246 MS.gene045539:CDS 50.0%
TCGGAAAGGGTTGAAGGAAG+AGG + chr4.2:30987701-30987720 MS.gene045539:CDS 50.0%
!! TGGATGAGAAGTGGGCTACA+TGG + chr4.2:30987498-30987517 MS.gene045539:CDS 50.0%
!! AAGTGGGCTACATGGCTTGG+TGG + chr4.2:30987506-30987525 MS.gene045539:CDS 55.0%
!! GAGAAGTGGGCTACATGGCT+TGG + chr4.2:30987503-30987522 MS.gene045539:CDS 55.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 30987014 30988126 30987014 ID=MS.gene045539
chr4.2 mRNA 30987014 30988126 30987014 ID=MS.gene045539.t1;Parent=MS.gene045539
chr4.2 exon 30987014 30988126 30987014 ID=MS.gene045539.t1.exon1;Parent=MS.gene045539.t1
chr4.2 CDS 30987014 30988126 30987014 ID=cds.MS.gene045539.t1;Parent=MS.gene045539.t1
Gene Sequence

>MS.gene045539

ATGACAGCAATGGACTTAACTCAACATGATATTGAAACTCATCTCTCGAATCTCAAACCTCACATTGTTTTCTATGATTTTACTCATTGGCTTCCATCTATAACAAAACGTTTAGGTATCAAAGCTCTTCATTATTGCACTGCTAGTTCGGTTATGGTTGGTTACACTCTAACACCAGCTAGATATTCAATGGGAAAAGATTTAACCGAATTTGATCTCATGGAACCTCCTTCTGGTTACCCTGATTCATCTATCAAGCTTTATAATCATGAAGCTAAAGCCTTTGCAGCTAAAAGGAAAGAATTTTTTGGTAGCAATGTTCTTTTCTATGATCGGCAAGCGCTTGCTATGAATGAAGCTGATGCATTAGGATACAGAACATGCAGAGAGATTGAAGGGCCTTATCTTGATTACGTACATAAACAGTTTAATAAACCAGTTCTTACTTCAGGACTAGTTATACTTGAAAACCCAAATTCTGTTTTGGATGAGAAGTGGGCTACATGGCTTGGTGGATTCAAAACAAATTCAGTTGTTTATTGTTGTTTTGGAAGTGAATGTGTTTTAAGGCCAAATACATTTCAAGAATTAATTCTTGGTCTTGAGTTAACTGGTATGACATTTTTTGCAGCTTTGAAACCTCCTTTTGGATTCGAAACAATTGAAGAAGCATTGCCAGAAAGGTTTTCGGAAAGGGTTGAAGGAAGAGGTGTTGTTTATGGTGGTTGGGTTCAGCAACAATTGATTTTGGAACATCCTTCTGTGGGATGTTTCATTACACATTGTGGTTCAGGTTCTTTATCAGAGGCATTGGTGAATAAATGTCAATTAGTTTTGTTGCCAAATGTTGGTGACCAGATATTGAATGCTAGGATGATGGGAAACAACTTGAAAGTTGGTGTGGAAGTTGAGAAAGATGAAGATGGATTCTATACTAAGAATAATGTTTGTAAAGCTGTGAGCATTGTGATGAATGATGAGGATGAAATTAGTAAGACAGTAAGGGCTAATCATGCTAAGATTAGAGAGATGTTGCTTAATAAACATCTTGAGTCATCTTATATTGATGACTTCTGCAAGAAGCTTCAAGAGATTGTTGAAGGAAAGAAATGA

Protein sequence

>MS.gene045539.t1

MTAMDLTQHDIETHLSNLKPHIVFYDFTHWLPSITKRLGIKALHYCTASSVMVGYTLTPARYSMGKDLTEFDLMEPPSGYPDSSIKLYNHEAKAFAAKRKEFFGSNVLFYDRQALAMNEADALGYRTCREIEGPYLDYVHKQFNKPVLTSGLVILENPNSVLDEKWATWLGGFKTNSVVYCCFGSECVLRPNTFQELILGLELTGMTFFAALKPPFGFETIEEALPERFSERVEGRGVVYGGWVQQQLILEHPSVGCFITHCGSGSLSEALVNKCQLVLLPNVGDQILNARMMGNNLKVGVEVEKDEDGFYTKNNVCKAVSIVMNDEDEISKTVRANHAKIREMLLNKHLESSYIDDFCKKLQEIVEGKK