AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene073185


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene073185.t1 MTR_2g083480 82.789 459 78 1 1 459 1 458 0.0 779
MS.gene073185.t1 MTR_2g083420 81.917 459 58 2 1 459 1 434 0.0 773
MS.gene073185.t1 MTR_2g083390 81.481 459 60 2 1 459 1 434 0.0 768
MS.gene073185.t1 MTR_2g083430 76.253 459 108 1 1 459 1 458 0.0 697
MS.gene073185.t1 MTR_2g083380 66.885 459 151 1 1 459 18 475 0.0 614
MS.gene073185.t1 MTR_2g083490 65.577 459 157 1 1 459 1 458 0.0 610
MS.gene073185.t1 MTR_4g079250 60.087 461 179 4 1 459 1 458 0.0 572
MS.gene073185.t1 MTR_4g079270 59.219 461 183 4 1 459 1 458 0.0 563
MS.gene073185.t1 MTR_2g083360 64.317 454 56 5 6 459 27 374 0.0 540
MS.gene073185.t1 MTR_2g014900 58.186 452 187 2 8 459 7 456 0.0 538
MS.gene073185.t1 MTR_1g090270 41.649 461 250 11 7 458 14 464 1.52e-112 340
MS.gene073185.t1 MTR_2g086283 58.498 253 53 2 206 458 135 335 1.05e-94 290
MS.gene073185.t1 MTR_2g086283 62.774 137 50 1 11 147 1 136 3.10e-50 174
MS.gene073185.t1 MTR_4g059370 40.836 311 170 5 154 458 89 391 2.00e-76 244
MS.gene073185.t1 MTR_8g068360 32.911 474 290 14 2 459 6 467 8.32e-71 232
MS.gene073185.t1 MTR_8g068330 32.278 474 296 14 1 459 1 464 5.21e-68 224
MS.gene073185.t1 MTR_8g068340 31.250 464 304 10 2 455 6 464 1.15e-65 218
MS.gene073185.t1 MTR_7g067330 32.043 465 257 15 2 452 3 422 1.90e-65 217
MS.gene073185.t1 MTR_4g123553 32.759 464 279 14 6 455 13 457 5.93e-65 216
MS.gene073185.t1 MTR_6g042310 32.181 463 281 14 7 455 17 460 1.08e-61 208
MS.gene073185.t1 MTR_7g067120 31.906 467 255 18 2 452 3 422 1.47e-61 206
MS.gene073185.t1 MTR_2g008226 32.479 468 289 14 6 455 8 466 4.13e-60 204
MS.gene073185.t1 MTR_6g036650 31.092 476 288 14 1 455 11 467 4.78e-60 204
MS.gene073185.t1 MTR_2g008225 30.835 467 299 11 2 456 9 463 1.33e-59 202
MS.gene073185.t1 MTR_2g008220 31.478 467 296 11 2 456 8 462 3.37e-59 201
MS.gene073185.t1 MTR_2g046620 31.818 462 286 13 6 455 14 458 9.83e-58 197
MS.gene073185.t1 MTR_2g014930 40.345 290 92 6 17 306 9 217 1.33e-56 187
MS.gene073185.t1 MTR_4g077960 30.396 454 281 15 17 455 1 434 1.38e-51 181
MS.gene073185.t1 MTR_2g083440 76.471 102 24 0 358 459 11 112 5.00e-51 169
MS.gene073185.t1 MTR_4g079280 40.611 229 90 3 11 239 1 183 2.64e-50 169
MS.gene073185.t1 MTR_3g435310 29.844 449 260 13 6 451 16 412 5.78e-49 173
MS.gene073185.t1 MTR_1g090280 43.750 208 105 5 262 458 108 314 4.34e-46 162
MS.gene073185.t1 MTR_8g007650 30.159 441 279 11 7 429 6 435 3.68e-45 164
MS.gene073185.t1 MTR_8g007565 29.932 441 280 11 7 429 6 435 4.12e-45 164
MS.gene073185.t1 MTR_5g066410 28.929 439 262 10 11 428 1 410 1.12e-41 154
MS.gene073185.t1 MTR_8g066610 28.298 470 282 16 1 434 1 451 1.74e-34 135
MS.gene073185.t1 MTR_8g071070 26.667 480 314 16 5 458 4 471 8.97e-32 127
MS.gene073185.t1 MTR_5g087620 26.840 462 284 17 8 428 10 458 2.20e-30 123
MS.gene073185.t1 MTR_6g023665 27.902 448 278 17 9 428 14 444 6.13e-30 122
MS.gene073185.t1 MTR_8g009050 28.450 471 262 18 7 435 5 442 1.39e-29 120
MS.gene073185.t1 MTR_4g031800 26.623 462 287 17 6 435 7 448 5.58e-29 119
MS.gene073185.t1 MTR_0009s0240 26.341 410 275 13 5 398 4 402 9.07e-29 118
MS.gene073185.t1 MTR_2g098430 24.468 470 291 18 9 438 7 452 1.02e-28 118
MS.gene073185.t1 MTR_8g009055 27.511 458 283 17 7 435 5 442 2.20e-28 117
MS.gene073185.t1 MTR_4g485590 28.293 410 235 14 8 395 9 381 2.92e-28 116
MS.gene073185.t1 MTR_1g062380 26.793 474 277 21 5 429 13 465 1.70e-27 115
MS.gene073185.t1 MTR_6g488280 27.130 446 284 15 9 428 7 437 2.17e-27 114
MS.gene073185.t1 MTR_0428s0010 27.130 446 284 15 9 428 7 437 2.17e-27 114
MS.gene073185.t1 MTR_8g027885 28.509 456 275 17 6 433 16 448 2.85e-27 114
MS.gene073185.t1 MTR_4g485620 26.940 464 254 19 20 434 1 428 7.17e-27 112
MS.gene073185.t1 MTR_6g005600 37.436 195 102 4 256 437 255 442 1.50e-26 112
MS.gene073185.t1 MTR_8g027870 27.331 472 260 17 6 433 16 448 3.85e-26 110
MS.gene073185.t1 MTR_8g008990 27.174 460 284 17 7 435 5 444 4.23e-26 110
MS.gene073185.t1 MTR_8g465670 25.055 455 275 15 9 425 8 434 4.53e-26 110
MS.gene073185.t1 MTR_7g070660 23.913 460 295 16 7 429 10 451 6.93e-26 110
MS.gene073185.t1 MTR_7g070740 24.307 469 294 14 7 434 10 458 1.09e-25 109
MS.gene073185.t1 MTR_7g117170 35.789 190 106 5 258 435 266 451 1.37e-25 109
MS.gene073185.t1 MTR_3g009510 32.719 217 127 5 237 437 241 454 1.54e-25 109
MS.gene073185.t1 MTR_8g006710 25.503 447 291 16 9 428 7 438 1.61e-25 108
MS.gene073185.t1 MTR_8g009063 26.866 469 273 17 7 437 12 448 1.93e-25 108
MS.gene073185.t1 MTR_0184s0030 35.211 213 113 7 234 426 230 437 2.64e-25 108
MS.gene073185.t1 MTR_5g045970 26.891 476 278 18 5 433 13 465 2.82e-25 108
MS.gene073185.t1 MTR_4g485630 26.013 469 281 18 7 434 8 451 4.01e-25 108
MS.gene073185.t1 MTR_7g070810 25.113 442 295 13 7 422 8 439 4.12e-25 108
MS.gene073185.t1 MTR_5g035560 24.792 480 296 18 7 457 10 453 1.17e-24 107
MS.gene073185.t1 MTR_8g006730 25.336 446 296 15 8 428 6 439 1.24e-24 106
MS.gene073185.t1 MTR_8g006220 24.892 462 275 15 9 425 7 441 1.34e-24 106
MS.gene073185.t1 MTR_6g038220 24.619 459 287 16 8 441 11 435 1.36e-24 106
MS.gene073185.t1 MTR_7g013180 26.279 430 279 13 8 420 5 413 1.41e-24 106
MS.gene073185.t1 MTR_8g009073 27.673 477 256 23 7 435 5 440 2.08e-24 105
MS.gene073185.t1 MTR_6g033625 25.918 463 280 18 9 435 5 440 2.46e-24 105
MS.gene073185.t1 MTR_0184s0040 33.488 215 126 7 254 458 269 476 2.69e-24 105
MS.gene073185.t1 MTR_0078s0190 33.488 215 126 7 254 458 269 476 2.69e-24 105
MS.gene073185.t1 MTR_8g466240 27.002 437 243 18 1 399 1 399 3.28e-24 105
MS.gene073185.t1 MTR_6g033615 25.885 452 280 17 9 435 5 426 4.50e-24 104
MS.gene073185.t1 MTR_0078s0060 34.021 194 114 5 254 437 253 442 6.07e-24 104
MS.gene073185.t1 MTR_8g012635 33.790 219 122 7 236 436 235 448 1.49e-23 103
MS.gene073185.t1 MTR_8g006270 29.555 247 153 6 207 436 198 440 1.83e-23 103
MS.gene073185.t1 MTR_0078s0010 33.796 216 125 6 254 458 254 462 2.58e-23 102
MS.gene073185.t1 MTR_8g009073 33.953 215 124 7 235 435 101 311 2.86e-23 100
MS.gene073185.t1 MTR_7g046490 35.417 192 110 4 254 433 250 439 2.95e-23 102
MS.gene073185.t1 MTR_2g046820 33.478 230 139 6 237 455 236 462 3.58e-23 102
MS.gene073185.t1 MTR_7g070780 23.441 465 307 13 5 434 8 458 4.57e-23 102
MS.gene073185.t1 MTR_7g070940 23.725 451 310 14 7 434 8 447 5.20e-23 101
MS.gene073185.t1 MTR_7g013200 32.836 201 124 7 242 438 230 423 6.12e-23 101
MS.gene073185.t1 MTR_6g038200 24.834 451 289 18 8 437 11 432 8.33e-23 100
MS.gene073185.t1 MTR_8g012650 32.110 218 127 5 236 436 235 448 8.56e-23 101
MS.gene073185.t1 MTR_4g117980 23.529 459 293 15 6 425 9 448 8.69e-23 101
MS.gene073185.t1 MTR_6g038230 25.325 462 281 19 8 441 11 436 8.89e-23 100
MS.gene073185.t1 MTR_8g077590 29.537 281 179 5 166 433 168 442 1.03e-22 100
MS.gene073185.t1 MTR_6g038240 33.511 188 111 7 249 436 258 431 1.06e-22 100
MS.gene073185.t1 MTR_4g024020 24.454 458 290 17 7 422 8 451 1.49e-22 100
MS.gene073185.t1 MTR_8g012730 32.432 222 131 5 229 436 69 285 1.63e-22 98.2
MS.gene073185.t1 MTR_7g013220 33.333 186 112 6 260 445 263 436 1.64e-22 100
MS.gene073185.t1 MTR_1g019520 35.632 174 99 3 258 420 4 175 1.77e-22 95.9
MS.gene073185.t1 MTR_7g070610 23.256 473 295 16 7 434 12 461 2.32e-22 100
MS.gene073185.t1 MTR_4g128720 24.731 465 296 17 7 445 14 450 2.32e-22 99.8
MS.gene073185.t1 MTR_8g009067 35.106 188 108 5 258 435 139 322 4.26e-22 97.8
MS.gene073185.t1 MTR_8g009067 35.106 188 108 5 258 435 257 440 6.16e-22 98.6
MS.gene073185.t1 MTR_7g070800 23.701 481 283 16 5 434 3 450 6.34e-22 98.6
MS.gene073185.t1 MTR_1g019510 26.739 460 281 21 7 435 5 439 6.46e-22 98.6
MS.gene073185.t1 MTR_7g102460 25.591 465 273 21 7 422 8 448 8.95e-22 98.2
MS.gene073185.t1 MTR_6g033725 30.802 237 142 7 217 435 205 437 9.95e-22 97.8
MS.gene073185.t1 MTR_7g047030 34.946 186 107 5 260 435 260 441 1.00e-21 97.8
MS.gene073185.t1 MTR_7g047270 34.946 186 107 5 260 435 260 441 1.00e-21 97.8
MS.gene073185.t1 MTR_2g059240 24.889 450 297 11 8 432 13 446 1.74e-21 97.1
MS.gene073185.t1 MTR_4g117950 25.390 449 279 16 6 423 4 427 1.97e-21 97.1
MS.gene073185.t1 MTR_8g083290 23.690 477 278 17 6 435 2 439 2.26e-21 96.7
MS.gene073185.t1 MTR_5g035580 33.880 183 111 5 253 435 257 429 2.64e-21 96.7
MS.gene073185.t1 MTR_7g055710 23.241 469 299 15 7 434 10 458 2.77e-21 96.7
MS.gene073185.t1 MTR_7g102560 29.231 260 159 5 202 437 203 461 2.84e-21 96.7
MS.gene073185.t1 MTR_5g045960 26.514 479 293 21 7 444 8 468 3.07e-21 96.7
MS.gene073185.t1 MTR_3g069690 31.694 183 116 5 254 435 251 425 3.12e-21 96.3
MS.gene073185.t1 MTR_8g006260 31.925 213 124 8 242 436 246 455 3.16e-21 96.3
MS.gene073185.t1 MTR_2g046750 32.609 230 141 6 237 455 239 465 3.50e-21 96.3
MS.gene073185.t1 MTR_7g117405 26.496 468 279 21 8 434 12 455 3.83e-21 96.3
MS.gene073185.t1 MTR_7g070910 22.796 465 311 14 5 434 8 459 4.24e-21 96.3
MS.gene073185.t1 MTR_3g009490 34.731 167 93 4 284 437 3 166 6.29e-21 90.5
MS.gene073185.t1 MTR_5g019580 31.019 216 130 5 237 434 265 479 8.55e-21 95.5
MS.gene073185.t1 MTR_7g102490 24.945 457 288 16 7 422 8 450 8.60e-21 95.1
MS.gene073185.t1 MTR_5g098930 23.265 490 301 16 7 451 4 463 9.34e-21 95.1
MS.gene073185.t1 MTR_7g071040 22.678 463 314 13 5 434 14 465 9.47e-21 95.1
MS.gene073185.t1 MTR_5g019580 31.019 216 130 5 237 434 241 455 1.11e-20 94.7
MS.gene073185.t1 MTR_7g102550 26.022 465 290 18 8 433 9 458 1.15e-20 94.7
MS.gene073185.t1 MTR_2g040530 29.545 264 156 7 220 455 203 464 1.32e-20 94.4
MS.gene073185.t1 MTR_8g074550 22.424 495 293 17 1 435 1 464 1.40e-20 94.7
MS.gene073185.t1 MTR_8g012630 32.642 193 112 4 258 436 204 392 2.01e-20 93.6
MS.gene073185.t1 MTR_8g088560 30.290 241 134 9 237 455 229 457 2.93e-20 93.6
MS.gene073185.t1 MTR_3g069710 30.233 258 163 10 211 458 204 454 4.35e-20 92.8
MS.gene073185.t1 MTR_7g013260 23.758 463 278 15 8 441 6 422 7.71e-20 92.0
MS.gene073185.t1 MTR_7g013240 30.882 204 125 7 242 441 230 421 8.96e-20 91.7
MS.gene073185.t1 MTR_8g083280 29.741 232 129 8 242 450 249 469 1.15e-19 91.7
MS.gene073185.t1 MTR_4g128690 30.493 223 141 6 200 420 205 415 1.22e-19 91.7
MS.gene073185.t1 MTR_7g102450 35.465 172 99 4 268 428 270 440 2.23e-19 90.9
MS.gene073185.t1 MTR_6g013900 32.768 177 105 6 254 428 283 447 2.46e-19 90.9
MS.gene073185.t1 MTR_2g034990 22.757 457 305 15 1 423 4 446 2.57e-19 90.9
MS.gene073185.t1 MTR_1g107350 34.444 180 112 5 258 435 269 444 2.62e-19 90.5
MS.gene073185.t1 MTR_8g012745 27.703 296 183 10 162 436 160 445 2.77e-19 90.5
MS.gene073185.t1 MTR_8g044140 25.130 386 242 11 64 417 37 407 3.51e-19 90.1
MS.gene073185.t1 MTR_3g049970 25.793 473 280 20 3 435 4 445 3.93e-19 90.1
MS.gene073185.t1 MTR_5g090610 26.715 277 174 7 187 439 173 444 4.03e-19 90.1
MS.gene073185.t1 MTR_6g033675 28.992 238 142 8 220 435 208 440 4.11e-19 90.1
MS.gene073185.t1 MTR_5g067170 32.275 189 111 5 254 426 262 449 4.16e-19 90.1
MS.gene073185.t1 MTR_6g014170 30.102 196 123 6 254 447 266 449 5.38e-19 89.7
MS.gene073185.t1 MTR_3g084540 28.767 219 128 6 242 437 238 451 6.16e-19 89.4
MS.gene073185.t1 MTR_5g027210 25.461 271 165 6 213 451 212 477 6.58e-19 89.4
MS.gene073185.t1 MTR_6g033660 32.065 184 119 4 254 435 260 439 7.59e-19 89.4
MS.gene073185.t1 MTR_5g090660 28.634 227 137 7 235 439 233 456 8.13e-19 89.4
MS.gene073185.t1 MTR_0536s0010 24.499 449 282 16 6 423 19 441 9.13e-19 89.0
MS.gene073185.t1 MTR_8g064880 25.435 460 258 21 5 413 6 431 9.64e-19 89.0
MS.gene073185.t1 MTR_3g084530 29.224 219 126 7 242 437 238 450 1.00e-18 89.0
MS.gene073185.t1 MTR_1g107315 32.536 209 121 7 220 413 221 424 1.24e-18 88.6
MS.gene073185.t1 MTR_7g080950 32.979 188 114 7 254 441 253 428 1.56e-18 88.2
MS.gene073185.t1 MTR_6g038300 30.688 189 118 6 249 437 258 433 1.65e-18 88.2
MS.gene073185.t1 MTR_5g090700 29.911 224 134 7 237 439 239 460 1.66e-18 88.2
MS.gene073185.t1 MTR_8g008970 32.979 188 112 5 258 435 257 440 1.68e-18 89.0
MS.gene073185.t1 MTR_8g008970 27.358 318 196 10 126 437 475 763 2.37e-18 88.6
MS.gene073185.t1 MTR_4g485640 29.362 235 137 8 221 429 409 640 1.88e-18 88.6
MS.gene073185.t1 MTR_7g102520 35.404 161 102 2 255 414 276 435 2.28e-18 87.8
MS.gene073185.t1 MTR_3g084520 30.366 191 120 6 254 437 266 450 2.72e-18 87.4
MS.gene073185.t1 MTR_1g029540 23.490 447 294 17 13 438 19 438 3.11e-18 87.4
MS.gene073185.t1 MTR_6g014020 30.978 184 113 6 254 435 284 455 3.16e-18 87.4
MS.gene073185.t1 MTR_1g107360 31.373 204 128 5 233 435 245 437 3.36e-18 87.0
MS.gene073185.t1 MTR_3g079480 24.034 466 280 19 8 428 21 457 5.30e-18 86.7
MS.gene073185.t1 MTR_5g098960 30.901 233 135 10 234 455 229 446 5.46e-18 86.7
MS.gene073185.t1 MTR_7g070870 23.284 408 284 12 4 395 15 409 6.11e-18 86.3
MS.gene073185.t1 MTR_0288s0020 31.282 195 116 7 211 400 230 411 7.71e-18 86.3
MS.gene073185.t1 MTR_5g090620 26.255 259 152 8 218 439 203 459 8.09e-18 86.3
MS.gene073185.t1 MTR_7g071050 22.505 471 292 16 7 456 12 430 8.56e-18 85.9
MS.gene073185.t1 MTR_0891s0010 29.825 171 111 4 258 428 97 258 9.01e-18 84.0
MS.gene073185.t1 MTR_6g014220 29.167 192 122 6 258 447 286 465 9.91e-18 85.9
MS.gene073185.t1 MTR_6g013920 30.899 178 107 6 254 428 283 447 1.02e-17 85.9
MS.gene073185.t1 MTR_7g011470 23.555 467 307 13 8 447 10 453 1.11e-17 85.5
MS.gene073185.t1 MTR_4g008630 27.519 258 161 8 200 438 191 441 1.14e-17 85.5
MS.gene073185.t1 MTR_3g479610 30.409 171 110 4 258 428 120 281 1.24e-17 84.0
MS.gene073185.t1 MTR_2g035020 22.807 456 306 16 1 423 4 446 1.67e-17 85.1
MS.gene073185.t1 MTR_7g070860 22.363 474 280 15 7 434 6 437 1.99e-17 84.7
MS.gene073185.t1 MTR_7g470610 33.750 160 101 4 254 410 128 285 2.43e-17 82.8
MS.gene073185.t1 MTR_7g070583 33.750 160 101 4 254 410 128 285 2.43e-17 82.8
MS.gene073185.t1 MTR_2g035040 29.897 194 117 5 258 437 173 361 2.44e-17 84.0
MS.gene073185.t1 MTR_6g035265 28.571 196 121 5 258 435 259 453 2.50e-17 84.7
MS.gene073185.t1 MTR_7g012120 30.366 191 117 5 254 429 266 455 2.88e-17 84.3
MS.gene073185.t1 MTR_4g094920 27.404 208 142 6 254 455 275 479 3.13e-17 84.3
MS.gene073185.t1 MTR_5g029800 30.726 179 109 4 254 418 260 437 3.47e-17 84.3
MS.gene073185.t1 MTR_6g035185 21.627 467 308 15 1 428 4 451 3.51e-17 84.3
MS.gene073185.t1 MTR_2g008210 31.818 176 111 6 254 428 278 445 3.65e-17 84.0
MS.gene073185.t1 MTR_6g014200 30.435 184 114 6 254 435 281 452 3.86e-17 84.0
MS.gene073185.t1 MTR_7g080940 30.601 183 116 5 255 437 259 430 4.09e-17 84.0
MS.gene073185.t1 MTR_4g108250 28.351 194 126 5 250 433 271 461 4.16e-17 84.0
MS.gene073185.t1 MTR_4g095008 29.586 169 112 5 254 418 260 425 4.16e-17 84.3
MS.gene073185.t1 MTR_3g479520 22.881 472 299 19 1 428 1 451 4.40e-17 84.0
MS.gene073185.t1 MTR_7g011470 26.042 288 181 9 178 447 176 449 4.56e-17 83.6
MS.gene073185.t1 MTR_4g117960 30.939 181 109 4 258 423 266 445 5.80e-17 83.6
MS.gene073185.t1 MTR_8g059425 30.556 180 111 6 258 435 286 453 6.28e-17 83.6
MS.gene073185.t1 MTR_8g032950 30.159 189 113 6 256 428 264 449 6.29e-17 83.6
MS.gene073185.t1 MTR_7g080935 30.055 183 117 5 255 437 259 430 7.53e-17 83.2
MS.gene073185.t1 MTR_6g014250 29.444 180 113 6 258 435 286 453 1.01e-16 82.8
MS.gene073185.t1 MTR_8g090095 26.122 245 163 7 210 439 218 459 1.04e-16 82.8
MS.gene073185.t1 MTR_8g007585 29.167 192 122 6 258 447 200 379 1.16e-16 82.0
MS.gene073185.t1 MTR_1g107375 32.584 178 108 5 258 435 264 429 1.23e-16 82.4
MS.gene073185.t1 MTR_6g011340 26.337 243 154 9 182 406 198 433 1.29e-16 82.4
MS.gene073185.t1 MTR_5g058320 31.765 170 104 5 254 421 269 428 1.34e-16 82.4
MS.gene073185.t1 MTR_6g014190 32.544 169 102 5 254 420 91 249 1.43e-16 80.5
MS.gene073185.t1 MTR_5g090630 28.311 219 134 6 242 439 233 449 1.53e-16 82.0
MS.gene073185.t1 MTR_6g013990 28.261 184 118 6 254 435 282 453 2.03e-16 81.6
MS.gene073185.t1 MTR_6g013450 28.962 183 119 5 254 430 285 462 2.93e-16 81.3
MS.gene073185.t1 MTR_6g013440 29.348 184 116 6 254 435 285 456 3.35e-16 81.3
MS.gene073185.t1 MTR_4g082810 32.941 170 105 3 237 398 240 408 3.93e-16 80.5
MS.gene073185.t1 MTR_3g031450 26.009 223 135 5 221 428 213 420 4.13e-16 80.9
MS.gene073185.t1 MTR_1g032490 35.625 160 95 5 258 413 271 426 4.95e-16 80.5
MS.gene073185.t1 MTR_8g056740 25.862 232 158 5 211 432 111 338 5.65e-16 80.1
MS.gene073185.t1 MTR_6g014050 29.670 182 114 6 256 435 287 456 5.85e-16 80.5
MS.gene073185.t1 MTR_3g008010 28.497 193 122 7 258 447 286 465 6.28e-16 80.1
MS.gene073185.t1 MTR_1g107365 29.851 201 115 7 228 413 258 447 9.04e-16 79.7
MS.gene073185.t1 MTR_5g040030 25.630 238 149 7 216 429 224 457 1.04e-15 79.7
MS.gene073185.t1 MTR_5g072810 22.272 449 297 17 8 435 12 429 1.06e-15 79.3
MS.gene073185.t1 MTR_8g064870 32.105 190 115 7 254 435 266 449 1.07e-15 79.7
MS.gene073185.t1 MTR_6g014240 28.804 184 117 6 254 435 251 422 1.37e-15 79.0
MS.gene073185.t1 MTR_6g014270 28.804 184 117 6 254 435 283 454 1.65e-15 79.0
MS.gene073185.t1 MTR_4g082820 31.937 191 110 4 237 407 234 424 1.78e-15 79.0
MS.gene073185.t1 MTR_6g014310 26.446 242 146 10 211 435 230 456 1.91e-15 79.0
MS.gene073185.t1 MTR_0036s0220 24.124 485 255 26 8 429 12 446 2.05e-15 78.6
MS.gene073185.t1 MTR_7g070930 31.720 186 112 6 260 434 281 462 2.28e-15 78.6
MS.gene073185.t1 MTR_5g072860 22.609 460 298 16 8 440 18 446 2.30e-15 78.6
MS.gene073185.t1 MTR_6g014150 31.579 152 94 5 254 400 281 427 2.84e-15 78.2
MS.gene073185.t1 MTR_5g070040 30.909 220 134 10 222 428 228 442 3.03e-15 78.2
MS.gene073185.t1 MTR_3g479490 30.882 136 92 2 260 395 283 416 3.38e-15 78.2
MS.gene073185.t1 MTR_5g090580 25.097 259 157 8 216 439 202 458 3.96e-15 77.8
MS.gene073185.t1 MTR_6g014040 29.348 184 116 6 254 435 285 456 4.31e-15 77.8
MS.gene073185.t1 MTR_4g117890 27.322 183 117 4 258 425 260 441 4.70e-15 77.4
MS.gene073185.t1 MTR_5g072820 22.398 442 302 14 8 435 10 424 6.69e-15 77.0
MS.gene073185.t1 MTR_0536s0020 26.977 215 133 6 258 449 265 478 8.29e-15 77.0
MS.gene073185.t1 MTR_5g016480 33.929 112 72 2 252 362 267 377 1.04e-14 76.6
MS.gene073185.t1 MTR_5g016660 21.849 476 299 18 2 428 3 454 1.11e-14 76.6
MS.gene073185.t1 MTR_5g072840 21.622 444 303 14 8 435 10 424 2.50e-14 75.1
MS.gene073185.t1 MTR_5g039900 22.222 468 293 17 7 429 12 453 2.80e-14 75.1
MS.gene073185.t1 MTR_6g014290 26.842 190 125 6 260 447 288 465 2.86e-14 75.1
MS.gene073185.t1 MTR_5g004940 35.294 119 75 2 258 375 197 314 3.94e-14 74.3
MS.gene073185.t1 MTR_1g107285 32.099 162 99 4 254 413 267 419 6.15e-14 73.9
MS.gene073185.t1 MTR_8g009840 28.405 257 151 9 208 444 266 509 6.69e-14 74.3
MS.gene073185.t1 MTR_4g118000 22.870 446 282 17 6 418 10 426 1.09e-13 73.2
MS.gene073185.t1 MTR_5g072830 21.847 444 302 15 8 435 10 424 1.82e-13 72.4
MS.gene073185.t1 MTR_6g013960 28.966 145 96 4 254 396 284 423 2.00e-13 72.4
MS.gene073185.t1 MTR_5g464810 30.337 178 107 7 254 428 282 445 2.07e-13 72.4
MS.gene073185.t1 MTR_5g064240 30.337 178 107 7 254 428 282 445 2.07e-13 72.4
MS.gene073185.t1 MTR_1g040310 21.272 456 287 17 7 417 14 442 3.60e-13 71.6
MS.gene073185.t1 MTR_7g039550 25.000 252 154 9 221 448 5 245 3.73e-13 70.1
MS.gene073185.t1 MTR_4g094220 29.651 172 106 6 260 428 288 447 6.17e-13 70.9
MS.gene073185.t1 MTR_0477s0010 27.041 196 129 6 254 447 121 304 2.56e-12 68.2
MS.gene073185.t1 MTR_5g031830 29.496 139 94 3 258 396 281 415 4.12e-12 68.6
MS.gene073185.t1 MTR_7g080900 30.058 173 111 5 258 430 264 426 5.53e-12 67.8
MS.gene073185.t1 MTR_6g078320 26.667 195 133 2 237 421 252 446 8.36e-12 67.4
MS.gene073185.t1 MTR_5g031840 31.915 141 88 5 258 396 272 406 3.97e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene073185.t1 AT5G54010 43.982 457 242 7 5 459 3 447 1.40e-137 403
MS.gene073185.t1 AT4G27570 43.326 457 238 6 8 459 7 447 2.21e-136 400
MS.gene073185.t1 AT5G53990 44.176 455 234 7 7 459 5 441 5.95e-135 396
MS.gene073185.t1 AT5G54060 43.601 461 250 8 5 459 10 466 1.38e-134 396
MS.gene073185.t1 AT4G27560 43.107 457 239 6 8 459 7 447 4.90e-134 394
MS.gene073185.t1 AT1G64920 42.919 459 238 8 7 459 5 445 3.99e-132 389
MS.gene073185.t1 AT4G09500 42.667 450 240 6 7 455 5 437 1.25e-130 385
MS.gene073185.t1 AT2G22930 43.545 457 234 7 7 459 5 441 6.94e-130 383
MS.gene073185.t1 AT1G64910 42.358 458 238 6 7 459 5 441 9.93e-130 383
MS.gene073185.t1 AT3G29630 42.070 454 244 5 5 455 3 440 1.06e-127 378
MS.gene073185.t1 AT3G29630 41.463 451 225 6 5 455 3 414 4.34e-120 357
MS.gene073185.t1 AT1G50580 41.189 454 246 7 5 455 3 438 1.35e-117 352
MS.gene073185.t1 AT4G09500 40.535 449 226 7 7 455 5 412 1.18e-116 348
MS.gene073185.t1 AT5G49690 32.379 454 287 10 7 453 9 449 1.23e-67 223
MS.gene073185.t1 AT2G22590 32.766 470 282 16 5 455 12 466 5.05e-67 222
MS.gene073185.t1 AT5G65550 30.655 473 296 16 1 455 1 459 9.18e-62 208
MS.gene073185.t1 AT2G22930 38.009 221 116 4 7 224 5 207 2.12e-44 157
MS.gene073185.t1 AT2G22930 35.238 105 63 3 358 459 187 289 9.24e-13 68.9
MS.gene073185.t1 AT5G03490 26.058 449 287 13 6 436 17 438 1.36e-33 132
MS.gene073185.t1 AT5G12890 26.226 469 296 17 4 438 6 458 2.14e-33 132
MS.gene073185.t1 AT2G16890 27.623 467 291 23 8 446 9 456 3.34e-32 128
MS.gene073185.t1 AT1G73880 25.829 422 273 13 2 400 8 412 7.90e-32 127
MS.gene073185.t1 AT1G51210 26.424 439 285 10 8 434 20 432 3.77e-31 124
MS.gene073185.t1 AT2G15490 26.580 459 293 15 7 431 6 454 4.05e-31 125
MS.gene073185.t1 AT2G15490 26.535 456 294 14 7 431 6 451 4.11e-31 125
MS.gene073185.t1 AT2G15480 26.724 464 294 15 7 435 9 461 8.51e-31 124
MS.gene073185.t1 AT2G15480 26.432 454 293 13 7 429 9 452 2.86e-30 123
MS.gene073185.t1 AT2G36770 28.541 466 274 20 6 428 12 461 4.35e-30 122
MS.gene073185.t1 AT4G36770 36.530 219 120 6 231 436 228 440 9.14e-30 121
MS.gene073185.t1 AT2G16890 27.378 431 271 21 8 413 9 422 2.93e-29 119
MS.gene073185.t1 AT2G36750 29.231 455 271 19 6 423 8 448 9.16e-29 119
MS.gene073185.t1 AT4G34131 25.662 491 313 16 2 455 4 479 1.01e-28 118
MS.gene073185.t1 AT4G34138 27.176 471 277 17 5 434 8 453 1.07e-28 118
MS.gene073185.t1 AT2G36800 27.922 462 285 19 5 428 9 460 2.31e-28 117
MS.gene073185.t1 AT2G18560 31.349 252 148 6 203 435 107 352 2.95e-28 115
MS.gene073185.t1 AT1G05675 27.111 450 279 18 8 435 6 428 3.80e-28 116
MS.gene073185.t1 AT2G36780 28.261 460 281 18 7 428 13 461 1.10e-27 115
MS.gene073185.t1 AT1G10400 25.720 486 293 21 7 452 6 463 1.47e-27 115
MS.gene073185.t1 AT5G14860 26.240 484 319 17 1 455 1 475 1.71e-27 115
MS.gene073185.t1 AT2G18570 30.556 252 150 5 203 435 197 442 1.95e-27 114
MS.gene073185.t1 AT2G31750 24.783 460 295 15 1 437 1 432 4.08e-27 113
MS.gene073185.t1 AT2G31750 24.783 460 295 15 1 437 1 432 5.33e-27 113
MS.gene073185.t1 AT1G05680 26.991 452 277 18 8 435 6 428 1.40e-26 112
MS.gene073185.t1 AT3G50740 25.431 464 290 16 8 436 7 449 1.53e-26 112
MS.gene073185.t1 AT4G34135 26.078 464 258 17 7 417 10 441 1.81e-26 112
MS.gene073185.t1 AT1G01420 35.514 214 117 6 237 435 235 442 9.72e-25 107
MS.gene073185.t1 AT1G01420 35.514 214 117 6 237 435 238 445 9.84e-25 107
MS.gene073185.t1 AT2G36760 27.015 459 275 18 6 422 12 452 1.60e-24 106
MS.gene073185.t1 AT3G53150 26.964 471 283 20 7 428 21 479 2.66e-24 105
MS.gene073185.t1 AT2G31790 25.000 460 278 19 8 435 8 432 1.38e-22 100
MS.gene073185.t1 AT4G01070 34.112 214 123 6 237 436 235 444 1.79e-22 100
MS.gene073185.t1 AT2G30140 25.629 437 279 16 8 428 13 419 1.96e-22 99.8
MS.gene073185.t1 AT3G53160 25.597 461 301 19 1 428 1 452 3.49e-22 99.4
MS.gene073185.t1 AT2G36970 30.263 228 147 6 216 438 229 449 7.11e-22 98.6
MS.gene073185.t1 AT2G29730 31.628 215 133 6 229 434 231 440 7.49e-22 98.2
MS.gene073185.t1 AT5G05880 26.651 439 288 16 1 426 1 418 7.67e-22 98.2
MS.gene073185.t1 AT5G66690 23.778 450 308 13 8 436 7 442 8.14e-22 98.2
MS.gene073185.t1 AT5G59580 25.641 468 299 19 8 455 9 447 1.44e-21 97.4
MS.gene073185.t1 AT2G30140 24.942 433 288 15 8 428 13 420 1.45e-21 97.4
MS.gene073185.t1 AT5G05860 25.828 453 292 17 7 446 8 429 6.67e-21 95.1
MS.gene073185.t1 AT2G43820 31.088 193 123 4 258 450 255 437 7.26e-21 95.1
MS.gene073185.t1 AT2G36790 28.511 470 277 22 2 428 7 460 9.10e-21 95.1
MS.gene073185.t1 AT2G43840 31.579 190 120 4 260 449 257 436 1.16e-20 94.7
MS.gene073185.t1 AT2G43840 31.579 190 120 4 260 449 257 436 1.22e-20 94.4
MS.gene073185.t1 AT2G30150 22.062 485 315 18 4 459 6 456 1.62e-20 94.4
MS.gene073185.t1 AT5G26310 24.167 480 306 16 8 453 7 462 2.01e-20 94.0
MS.gene073185.t1 AT4G15480 23.696 460 305 18 3 435 14 454 3.38e-20 93.6
MS.gene073185.t1 AT5G59590 30.000 270 168 11 196 455 191 449 3.42e-20 93.2
MS.gene073185.t1 AT3G46670 31.224 237 147 9 230 458 223 451 4.48e-20 92.8
MS.gene073185.t1 AT1G07250 28.571 231 153 6 237 457 246 474 1.82e-19 91.3
MS.gene073185.t1 AT1G01390 33.659 205 114 7 242 428 257 457 2.15e-19 90.9
MS.gene073185.t1 AT1G01390 33.659 205 114 7 242 428 240 440 2.16e-19 90.9
MS.gene073185.t1 AT3G46660 33.796 216 122 9 237 446 237 437 2.32e-19 90.9
MS.gene073185.t1 AT5G05870 29.832 238 149 8 207 436 204 431 2.51e-19 90.5
MS.gene073185.t1 AT5G05890 29.046 241 156 7 202 435 198 430 4.37e-19 89.7
MS.gene073185.t1 AT3G11340 31.667 180 111 6 258 435 251 420 7.59e-19 89.0
MS.gene073185.t1 AT2G30150 21.776 473 310 17 13 459 2 440 8.44e-19 89.0
MS.gene073185.t1 AT4G15550 29.902 204 130 6 242 437 253 451 1.06e-18 89.0
MS.gene073185.t1 AT4G15280 29.880 251 150 7 224 455 262 505 2.13e-18 88.2
MS.gene073185.t1 AT3G21560 25.105 474 280 18 4 435 8 448 2.24e-18 87.8
MS.gene073185.t1 AT4G15280 30.000 250 149 7 225 455 231 473 2.27e-18 87.8
MS.gene073185.t1 AT4G15500 31.492 181 114 6 258 436 267 439 2.64e-18 87.8
MS.gene073185.t1 AT3G21760 28.000 225 142 6 249 455 258 480 4.17e-18 87.0
MS.gene073185.t1 AT3G55700 29.703 202 133 5 247 446 246 440 4.92e-18 86.7
MS.gene073185.t1 AT4G15260 28.638 213 133 5 260 455 144 354 8.68e-18 85.1
MS.gene073185.t1 AT4G15490 22.560 461 312 15 1 435 1 442 1.24e-17 85.5
MS.gene073185.t1 AT2G29710 32.967 182 107 6 260 434 267 440 1.36e-17 85.5
MS.gene073185.t1 AT3G21800 29.108 213 132 4 260 455 265 475 1.65e-17 85.1
MS.gene073185.t1 AT3G22250 31.683 202 108 9 258 451 274 453 1.93e-17 84.7
MS.gene073185.t1 AT3G21790 27.237 257 163 6 221 455 224 478 2.23e-17 84.7
MS.gene073185.t1 AT5G38040 29.070 258 163 9 207 455 203 449 3.67e-17 84.0
MS.gene073185.t1 AT3G16520 30.729 192 122 4 260 447 263 447 4.32e-17 84.0
MS.gene073185.t1 AT3G16520 31.492 181 113 4 260 436 263 436 4.45e-17 84.0
MS.gene073185.t1 AT3G16520 31.492 181 113 4 260 436 263 436 5.01e-17 83.6
MS.gene073185.t1 AT3G55710 30.688 189 122 5 260 446 263 444 5.52e-17 83.6
MS.gene073185.t1 AT1G24100 29.474 190 125 4 260 449 268 448 6.34e-17 83.2
MS.gene073185.t1 AT1G06000 25.248 404 247 17 8 395 10 374 9.05e-17 82.8
MS.gene073185.t1 AT2G29740 32.000 200 126 7 237 428 250 447 1.13e-16 82.8
MS.gene073185.t1 AT1G05530 26.172 256 161 7 223 456 206 455 1.68e-16 82.0
MS.gene073185.t1 AT1G07260 27.948 229 153 6 237 455 245 471 1.95e-16 82.0
MS.gene073185.t1 AT3G21780 28.302 212 134 5 260 455 259 468 5.64e-16 80.5
MS.gene073185.t1 AT1G05560 28.251 223 139 7 242 449 275 491 6.68e-16 80.5
MS.gene073185.t1 AT1G05560 27.803 223 140 7 242 449 225 441 8.78e-16 79.7
MS.gene073185.t1 AT2G28080 25.833 240 156 7 215 436 220 455 9.42e-16 79.7
MS.gene073185.t1 AT3G21750 26.360 239 154 5 237 455 232 468 1.23e-15 79.3
MS.gene073185.t1 AT3G46690 29.958 237 150 8 198 426 191 419 1.56e-15 79.0
MS.gene073185.t1 AT1G78270 28.652 178 118 5 260 437 289 457 1.74e-15 79.0
MS.gene073185.t1 AT5G17030 25.311 241 160 8 203 437 207 433 3.06e-15 78.2
MS.gene073185.t1 AT1G22400 31.953 169 105 5 260 428 291 449 5.04e-15 77.4
MS.gene073185.t1 AT2G23250 28.448 232 148 7 236 455 210 435 6.99e-15 77.0
MS.gene073185.t1 AT1G22360 29.348 184 120 5 254 437 281 454 8.34e-15 77.0
MS.gene073185.t1 AT1G30530 29.082 196 121 7 259 451 263 443 1.14e-14 76.3
MS.gene073185.t1 AT4G14090 26.957 230 152 8 228 449 224 445 4.07e-14 74.7
MS.gene073185.t1 AT5G38010 23.747 459 270 19 8 429 10 425 4.48e-14 74.3
MS.gene073185.t1 AT2G23260 29.310 174 117 4 260 433 262 429 4.82e-14 74.3
MS.gene073185.t1 AT1G22380 29.730 185 118 6 254 437 284 457 5.34e-14 74.3
MS.gene073185.t1 AT3G46720 29.353 201 117 7 237 429 229 412 4.52e-13 71.2
MS.gene073185.t1 AT1G22360 30.986 142 95 3 254 395 281 419 1.49e-12 69.7
MS.gene073185.t1 AT3G02100 31.250 176 100 6 260 433 279 435 2.08e-12 69.3
MS.gene073185.t1 AT3G46650 29.091 220 140 8 228 441 205 414 1.71e-11 66.2

Find 89 sgRNAs with CRISPR-Local

Find 102 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACTATCTTCAAACTGTTTA+TGG 0.065632 2.3:-14242651 MS.gene073185:CDS
GGAAAACCTGTTCTGCTTTC+AGG 0.116567 2.3:-14242630 MS.gene073185:CDS
CCAAAGTAAGCTGGTAATAT+TGG 0.225002 2.3:+14242915 None:intergenic
AAAGGAAAAGGGATTGTTTA+TGG 0.232535 2.3:-14242360 MS.gene073185:CDS
ATCACAGTTCCTCATGTTAA+TGG 0.256113 2.3:-14243143 MS.gene073185:CDS
AGGAACTGTGATAGGGAAAA+AGG 0.317464 2.3:+14243154 None:intergenic
GGGTTTAGTGAAAGGGTTAA+AGG 0.333009 2.3:-14242378 MS.gene073185:CDS
AAGGGATTGTTTATGGAAGT+TGG 0.335805 2.3:-14242353 MS.gene073185:CDS
ACCCTTTCACTAAACCCTTC+AGG 0.349714 2.3:+14242384 None:intergenic
TTGCTTGGTCTTGAATTAAC+AGG 0.351707 2.3:-14242468 MS.gene073185:CDS
GCCACCAAATACAACTTTAG+AGG 0.355460 2.3:-14242592 MS.gene073185:CDS
ATAAGAGGGAATAAAGAAAA+TGG 0.359021 2.3:+14243086 None:intergenic
TTAACATGAGGAACTGTGAT+AGG 0.364501 2.3:+14243146 None:intergenic
ACCTCTTATTGCTAACTTGT+TGG 0.371026 2.3:+14243253 None:intergenic
TCCTCTAAAGTTGTATTTGG+TGG 0.375237 2.3:+14242591 None:intergenic
TCAGTAAGCAAACTAGAGTT+TGG 0.376300 2.3:-14242771 MS.gene073185:CDS
GCAGCACTTAAGCCACCTAT+TGG 0.380205 2.3:-14242432 MS.gene073185:CDS
GGCTTAAGTGCTGCAAGAAA+TGG 0.387827 2.3:+14242441 None:intergenic
GTGAAAGGGTTAAAGGAAAA+GGG 0.402436 2.3:-14242371 MS.gene073185:CDS
CCAATATTACCAGCTTACTT+TGG 0.414322 2.3:-14242915 MS.gene073185:CDS
AAAATGGGTTGCATGGCTTA+AGG 0.414943 2.3:-14242568 MS.gene073185:CDS
AGTGAAAGGGTTAAAGGAAA+AGG 0.420115 2.3:-14242372 MS.gene073185:CDS
AAATCAAAGAAAACTATTTG+TGG 0.424765 2.3:+14243005 None:intergenic
AAATGGGTTGCATGGCTTAA+GGG 0.427342 2.3:-14242567 MS.gene073185:CDS
TTATACGATCGCATTGGAAT+AGG 0.430219 2.3:-14242735 MS.gene073185:CDS
TGTCTCCAATACATGATATT+CGG 0.433722 2.3:-14242939 MS.gene073185:CDS
GTTGAGAAAGGTGATGAAGA+TGG 0.433750 2.3:-14242150 MS.gene073185:CDS
CAGTTTCTAGAGCTGTTGCT+TGG 0.434467 2.3:-14242483 MS.gene073185:CDS
TCTGTGGTTTATTGTGCATA+TGG 0.439244 2.3:-14242531 MS.gene073185:CDS
ACCTGAAGGGTTTAGTGAAA+GGG 0.441816 2.3:-14242385 MS.gene073185:CDS
TCAATCAACTCAAATCCAAT+AGG 0.441856 2.3:+14242417 None:intergenic
AGAGGACCTGAAAGCAGAAC+AGG 0.445486 2.3:+14242624 None:intergenic
AGAAACTGATTATGCTGTAA+TGG 0.452696 2.3:+14242498 None:intergenic
AAAGGTTGTAGAGAAATTGA+TGG 0.453691 2.3:-14242684 MS.gene073185:CDS
AATGTTTCCATGGTTTGCTA+TGG 0.456397 2.3:-14243303 MS.gene073185:CDS
TCCATGGCTGTAGCAATAAG+AGG 0.461979 2.3:+14243071 None:intergenic
AGTGATGAGTACAAAGTTGA+AGG 0.465574 2.3:-14242184 MS.gene073185:CDS
AAAGTTGTATTTGGTGGCTC+AGG 0.466161 2.3:+14242597 None:intergenic
TTGTTTATCTGTTTGATCCA+TGG 0.471266 2.3:+14243055 None:intergenic
TTTATATTTCCAAAGTAAGC+TGG 0.473316 2.3:+14242906 None:intergenic
TTGGACCGAATATCATGTAT+TGG 0.478223 2.3:+14242934 None:intergenic
CCCTCTTATTGCTACAGCCA+TGG 0.480560 2.3:-14243072 MS.gene073185:CDS
AACTTGATGCATGAATCATC+AGG 0.482297 2.3:+14242822 None:intergenic
TCCAACAAGTTAGCAATAAG+AGG 0.482356 2.3:-14243254 MS.gene073185:CDS
GAAGTTGTTTCAGCATTATG+AGG 0.483600 2.3:+14243116 None:intergenic
TTGGTGCTATTGCCACGTCT+TGG 0.486194 2.3:-14242231 MS.gene073185:CDS
ATGGATGATGAGAATGAGGT+TGG 0.487478 2.3:-14242084 MS.gene073185:CDS
TACCTGAAGGGTTTAGTGAA+AGG 0.490614 2.3:-14242386 MS.gene073185:CDS
ATGATTCTAAATTGTTGCTA+AGG 0.495803 2.3:+14242019 None:intergenic
TTGAAGATGCTTTACCTGAA+GGG 0.497840 2.3:-14242398 MS.gene073185:CDS
ATTCTAAATTGTTGCTAAGG+AGG 0.503967 2.3:+14242022 None:intergenic
ATGTTTCCATGGTTTGCTAT+GGG 0.504571 2.3:-14243302 MS.gene073185:CDS
TGCACATAGCAATGTTTCCA+TGG 0.504753 2.3:-14243313 MS.gene073185:CDS
TTGTTGGAGAAGTGAAGATA+TGG 0.515979 2.3:+14243269 None:intergenic
TCAGATGCAGTTGCTTTCAA+AGG 0.518452 2.3:-14242702 MS.gene073185:CDS
CTTCAGTTAAATCTCTACCT+TGG 0.530118 2.3:+14242874 None:intergenic
ATTGAAGATGCTTTACCTGA+AGG 0.532564 2.3:-14242399 MS.gene073185:CDS
GTTGGTATAGAAGTTGAGAA+AGG 0.534215 2.3:-14242162 MS.gene073185:CDS
ATGAGTACAAAGTTGAAGGT+TGG 0.534783 2.3:-14242180 MS.gene073185:CDS
TTGTTTCAGCATTATGAGGA+AGG 0.540636 2.3:+14243120 None:intergenic
CTAGTTTGCTTACTGAAGCT+AGG 0.545779 2.3:+14242778 None:intergenic
CTTCTATTATACGATCGCAT+TGG 0.549848 2.3:-14242741 MS.gene073185:CDS
TTGAGAAAGGTGATGAAGAT+GGG 0.554445 2.3:-14242149 MS.gene073185:CDS
TAACATGAGGAACTGTGATA+GGG 0.557835 2.3:+14243147 None:intergenic
AAGGTTGTAGAGAAATTGAT+GGG 0.562891 2.3:-14242683 MS.gene073185:CDS
TGGAGCTGCTTCTATAACTG+AGG 0.562901 2.3:-14242274 MS.gene073185:CDS
TTTGGTGGCTCAGGTAAAAG+AGG 0.569758 2.3:+14242606 None:intergenic
TGGCTTAAGGGATTCGAACA+TGG 0.570364 2.3:-14242555 MS.gene073185:CDS
ATTGCTATGTGCAAAGGTGA+AGG 0.578682 2.3:+14243323 None:intergenic
GGGATTCGAACATGGTTCTG+TGG 0.584749 2.3:-14242547 MS.gene073185:CDS
TCTTGCATTCATGATATGAT+CGG 0.585265 2.3:+14242206 None:intergenic
TGTGATGGATGATGAGAATG+AGG 0.586203 2.3:-14242088 MS.gene073185:CDS
GTTATGAAACATCCAACAGA+AGG 0.588945 2.3:+14242303 None:intergenic
GAATCATCAGGGAACTCTGA+AGG 0.590116 2.3:+14242834 None:intergenic
TGATGAGAATGAGGTTGGAA+GGG 0.600442 2.3:-14242079 MS.gene073185:CDS
ACTTGTTAACACGTGTCAGT+TGG 0.603876 2.3:-14242250 MS.gene073185:CDS
ATCAACTCAAATCCAATAGG+TGG 0.605154 2.3:+14242420 None:intergenic
ATGATGAGAATGAGGTTGGA+AGG 0.609355 2.3:-14242080 MS.gene073185:CDS
AGCAAACTAGAGTTTGGCAG+TGG 0.611149 2.3:-14242765 MS.gene073185:CDS
ACTTGATGCATGAATCATCA+GGG 0.631590 2.3:+14242823 None:intergenic
CCATGGCTGTAGCAATAAGA+GGG 0.634014 2.3:+14243072 None:intergenic
AAGTGTCCCATAGCAAACCA+TGG 0.639716 2.3:+14243296 None:intergenic
GGAGCTGCTTCTATAACTGA+GGG 0.647559 2.3:-14242273 MS.gene073185:CDS
CAAAGCTGTGAAGATTGTGA+TGG 0.655994 2.3:-14242103 MS.gene073185:CDS
GGAAACATTGCTATGTGCAA+AGG 0.662429 2.3:+14243317 None:intergenic
TGAGGAAGGCCATTAACATG+AGG 0.672414 2.3:+14243134 None:intergenic
ATATGATCGGAACCAAGACG+TGG 0.688479 2.3:+14242219 None:intergenic
TTATGAAACATCCAACAGAA+GGG 0.698749 2.3:+14242304 None:intergenic
GGATGTTTCATAACACACTG+TGG 0.766209 2.3:-14242294 MS.gene073185:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTCTTTGATTTTCAATAT+TGG - chr2.3:14242312-14242331 MS.gene073185:CDS 15.0%
!! AAATCAAAGAAAACTATTTG+TGG + chr2.3:14242305-14242324 None:intergenic 20.0%
!! AATATAAAAAGACAAAACCA+AGG - chr2.3:14242416-14242435 MS.gene073185:CDS 20.0%
! ATAAGAGGGAATAAAGAAAA+TGG + chr2.3:14242224-14242243 None:intergenic 25.0%
! ATGATTCTAAATTGTTGCTA+AGG + chr2.3:14243291-14243310 None:intergenic 25.0%
! TTTATATTTCCAAAGTAAGC+TGG + chr2.3:14242404-14242423 None:intergenic 25.0%
!! ACAAATTGAACTTCTTTTGA+AGG - chr2.3:14242271-14242290 MS.gene073185:CDS 25.0%
!! ATACAACTTTAGAGGAAAAA+TGG - chr2.3:14242723-14242742 MS.gene073185:CDS 25.0%
!! TACAACTTTAGAGGAAAAAT+GGG - chr2.3:14242724-14242743 MS.gene073185:CDS 25.0%
!!! AACTTGTTGAGTGTATTTTT+AGG + chr2.3:14242101-14242120 None:intergenic 25.0%
!!! ACTTGTTGAGTGTATTTTTA+GGG + chr2.3:14242100-14242119 None:intergenic 25.0%
!!! TTTTCCTCTAAAGTTGTATT+TGG + chr2.3:14242722-14242741 None:intergenic 25.0%
AAAGGAAAAGGGATTGTTTA+TGG - chr2.3:14242947-14242966 MS.gene073185:CDS 30.0%
AAAGGTTGTAGAGAAATTGA+TGG - chr2.3:14242623-14242642 MS.gene073185:CDS 30.0%
AAGGTTGTAGAGAAATTGAT+GGG - chr2.3:14242624-14242643 MS.gene073185:CDS 30.0%
AGAAACTGATTATGCTGTAA+TGG + chr2.3:14242812-14242831 None:intergenic 30.0%
ATTCTAAATTGTTGCTAAGG+AGG + chr2.3:14243288-14243307 None:intergenic 30.0%
CCAAACTTTACTCAAAAACT+TGG - chr2.3:14242338-14242357 MS.gene073185:CDS 30.0%
GACTATCTTCAAACTGTTTA+TGG - chr2.3:14242656-14242675 MS.gene073185:CDS 30.0%
GGGAAAAAGGTAATAAGATT+TGG + chr2.3:14242143-14242162 None:intergenic 30.0%
TCAATCAACTCAAATCCAAT+AGG + chr2.3:14242893-14242912 None:intergenic 30.0%
TCTTGCATTCATGATATGAT+CGG + chr2.3:14243104-14243123 None:intergenic 30.0%
TGTCTCCAATACATGATATT+CGG - chr2.3:14242368-14242387 MS.gene073185:CDS 30.0%
TTATGAAACATCCAACAGAA+GGG + chr2.3:14243006-14243025 None:intergenic 30.0%
TTGTTTATCTGTTTGATCCA+TGG + chr2.3:14242255-14242274 None:intergenic 30.0%
!!! CCAAGTTTTTGAGTAAAGTT+TGG + chr2.3:14242341-14242360 None:intergenic 30.0%
AACTTGATGCATGAATCATC+AGG + chr2.3:14242488-14242507 None:intergenic 35.0%
AAGGGATTGTTTATGGAAGT+TGG - chr2.3:14242954-14242973 MS.gene073185:CDS 35.0%
ACTTGATGCATGAATCATCA+GGG + chr2.3:14242487-14242506 None:intergenic 35.0%
AGTGAAAGGGTTAAAGGAAA+AGG - chr2.3:14242935-14242954 MS.gene073185:CDS 35.0%
AGTGATGAGTACAAAGTTGA+AGG - chr2.3:14243123-14243142 MS.gene073185:CDS 35.0%
ATCAACTCAAATCCAATAGG+TGG + chr2.3:14242890-14242909 None:intergenic 35.0%
ATCACAGTTCCTCATGTTAA+TGG - chr2.3:14242164-14242183 MS.gene073185:CDS 35.0%
ATGAGTACAAAGTTGAAGGT+TGG - chr2.3:14243127-14243146 MS.gene073185:CDS 35.0%
ATTGAAGATGCTTTACCTGA+AGG - chr2.3:14242908-14242927 MS.gene073185:CDS 35.0%
CCAAAGTAAGCTGGTAATAT+TGG + chr2.3:14242395-14242414 None:intergenic 35.0%
CCAATATTACCAGCTTACTT+TGG - chr2.3:14242392-14242411 MS.gene073185:CDS 35.0%
CTTCAGTTAAATCTCTACCT+TGG + chr2.3:14242436-14242455 None:intergenic 35.0%
CTTCTATTATACGATCGCAT+TGG - chr2.3:14242566-14242585 MS.gene073185:CDS 35.0%
GTGAAAGGGTTAAAGGAAAA+GGG - chr2.3:14242936-14242955 MS.gene073185:CDS 35.0%
GTTATGAAACATCCAACAGA+AGG + chr2.3:14243007-14243026 None:intergenic 35.0%
GTTGGTATAGAAGTTGAGAA+AGG - chr2.3:14243145-14243164 MS.gene073185:CDS 35.0%
TAACATGAGGAACTGTGATA+GGG + chr2.3:14242163-14242182 None:intergenic 35.0%
TCAGTAAGCAAACTAGAGTT+TGG - chr2.3:14242536-14242555 MS.gene073185:CDS 35.0%
TCCAACAAGTTAGCAATAAG+AGG - chr2.3:14242053-14242072 MS.gene073185:CDS 35.0%
TCTGTGGTTTATTGTGCATA+TGG - chr2.3:14242776-14242795 MS.gene073185:CDS 35.0%
TTAACATGAGGAACTGTGAT+AGG + chr2.3:14242164-14242183 None:intergenic 35.0%
TTATACGATCGCATTGGAAT+AGG - chr2.3:14242572-14242591 MS.gene073185:CDS 35.0%
TTGAAGATGCTTTACCTGAA+GGG - chr2.3:14242909-14242928 MS.gene073185:CDS 35.0%
TTGAGAAAGGTGATGAAGAT+GGG - chr2.3:14243158-14243177 MS.gene073185:CDS 35.0%
TTGGACCGAATATCATGTAT+TGG + chr2.3:14242376-14242395 None:intergenic 35.0%
TTGTTGGAGAAGTGAAGATA+TGG + chr2.3:14242041-14242060 None:intergenic 35.0%
TTGTTTCAGCATTATGAGGA+AGG + chr2.3:14242190-14242209 None:intergenic 35.0%
! ACCTCTTATTGCTAACTTGT+TGG + chr2.3:14242057-14242076 None:intergenic 35.0%
! GAAGTTGTTTCAGCATTATG+AGG + chr2.3:14242194-14242213 None:intergenic 35.0%
!! AATGTTTCCATGGTTTGCTA+TGG - chr2.3:14242004-14242023 MS.gene073185:CDS 35.0%
!! ATGTTTCCATGGTTTGCTAT+GGG - chr2.3:14242005-14242024 MS.gene073185:CDS 35.0%
!! TCCTCTAAAGTTGTATTTGG+TGG + chr2.3:14242719-14242738 None:intergenic 35.0%
!! TTGCTTGGTCTTGAATTAAC+AGG - chr2.3:14242839-14242858 MS.gene073185:CDS 35.0%
!!! ATTTTAGAACACCCTTCTGT+TGG - chr2.3:14242992-14243011 MS.gene073185:CDS 35.0%
ACCTGAAGGGTTTAGTGAAA+GGG - chr2.3:14242922-14242941 MS.gene073185:CDS 40.0%
AGGAACTGTGATAGGGAAAA+AGG + chr2.3:14242156-14242175 None:intergenic 40.0%
ATGATGAGAATGAGGTTGGA+AGG - chr2.3:14243227-14243246 MS.gene073185:CDS 40.0%
ATGGATGATGAGAATGAGGT+TGG - chr2.3:14243223-14243242 MS.gene073185:CDS 40.0%
ATTGCTATGTGCAAAGGTGA+AGG + chr2.3:14241987-14242006 None:intergenic 40.0%
CAAAGCTGTGAAGATTGTGA+TGG - chr2.3:14243204-14243223 MS.gene073185:CDS 40.0%
GCCACCAAATACAACTTTAG+AGG - chr2.3:14242715-14242734 MS.gene073185:CDS 40.0%
GGAAACATTGCTATGTGCAA+AGG + chr2.3:14241993-14242012 None:intergenic 40.0%
GGATGTTTCATAACACACTG+TGG - chr2.3:14243013-14243032 MS.gene073185:CDS 40.0%
GGGTTTAGTGAAAGGGTTAA+AGG - chr2.3:14242929-14242948 MS.gene073185:CDS 40.0%
GTTGAGAAAGGTGATGAAGA+TGG - chr2.3:14243157-14243176 MS.gene073185:CDS 40.0%
TACCTGAAGGGTTTAGTGAA+AGG - chr2.3:14242921-14242940 MS.gene073185:CDS 40.0%
TGATGAGAATGAGGTTGGAA+GGG - chr2.3:14243228-14243247 MS.gene073185:CDS 40.0%
TGCACATAGCAATGTTTCCA+TGG - chr2.3:14241994-14242013 MS.gene073185:CDS 40.0%
! AAAGTTGTATTTGGTGGCTC+AGG + chr2.3:14242713-14242732 None:intergenic 40.0%
! ACTTGTTAACACGTGTCAGT+TGG - chr2.3:14243057-14243076 MS.gene073185:CDS 40.0%
! TCAGATGCAGTTGCTTTCAA+AGG - chr2.3:14242605-14242624 MS.gene073185:CDS 40.0%
!! AAAATGGGTTGCATGGCTTA+AGG - chr2.3:14242739-14242758 MS.gene073185:CDS 40.0%
!! AAATGGGTTGCATGGCTTAA+GGG - chr2.3:14242740-14242759 MS.gene073185:CDS 40.0%
!! CTAGTTTGCTTACTGAAGCT+AGG + chr2.3:14242532-14242551 None:intergenic 40.0%
!! TAGAGGAAAAATGGGTTGCA+TGG - chr2.3:14242732-14242751 MS.gene073185:CDS 40.0%
!! TGTGATGGATGATGAGAATG+AGG - chr2.3:14243219-14243238 MS.gene073185:CDS 40.0%
AAGTGTCCCATAGCAAACCA+TGG + chr2.3:14242014-14242033 None:intergenic 45.0%
ACCCTTTCACTAAACCCTTC+AGG + chr2.3:14242926-14242945 None:intergenic 45.0%
AGCAAACTAGAGTTTGGCAG+TGG - chr2.3:14242542-14242561 MS.gene073185:CDS 45.0%
ATATGATCGGAACCAAGACG+TGG + chr2.3:14243091-14243110 None:intergenic 45.0%
CCATGGCTGTAGCAATAAGA+GGG + chr2.3:14242238-14242257 None:intergenic 45.0%
GAATCATCAGGGAACTCTGA+AGG + chr2.3:14242476-14242495 None:intergenic 45.0%
GGAAAACCTGTTCTGCTTTC+AGG - chr2.3:14242677-14242696 MS.gene073185:CDS 45.0%
GGAGCTGCTTCTATAACTGA+GGG - chr2.3:14243034-14243053 MS.gene073185:CDS 45.0%
TCCATGGCTGTAGCAATAAG+AGG + chr2.3:14242239-14242258 None:intergenic 45.0%
TGAGGAAGGCCATTAACATG+AGG + chr2.3:14242176-14242195 None:intergenic 45.0%
TGGAGCTGCTTCTATAACTG+AGG - chr2.3:14243033-14243052 MS.gene073185:CDS 45.0%
TGGCTTAAGGGATTCGAACA+TGG - chr2.3:14242752-14242771 MS.gene073185:CDS 45.0%
! GGCTTAAGTGCTGCAAGAAA+TGG + chr2.3:14242869-14242888 None:intergenic 45.0%
! TTTGGTGGCTCAGGTAAAAG+AGG + chr2.3:14242704-14242723 None:intergenic 45.0%
!! CAGTTTCTAGAGCTGTTGCT+TGG - chr2.3:14242824-14242843 MS.gene073185:CDS 45.0%
AGAGGACCTGAAAGCAGAAC+AGG + chr2.3:14242686-14242705 None:intergenic 50.0%
CCCTCTTATTGCTACAGCCA+TGG - chr2.3:14242235-14242254 MS.gene073185:CDS 50.0%
GCAGCACTTAAGCCACCTAT+TGG - chr2.3:14242875-14242894 MS.gene073185:CDS 50.0%
! GGGATTCGAACATGGTTCTG+TGG - chr2.3:14242760-14242779 MS.gene073185:CDS 50.0%
!! TTGGTGCTATTGCCACGTCT+TGG - chr2.3:14243076-14243095 MS.gene073185:CDS 50.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 14241975 14243354 14241975 ID=MS.gene073185
chr2.3 mRNA 14241975 14243354 14241975 ID=MS.gene073185.t1;Parent=MS.gene073185
chr2.3 exon 14241975 14243354 14241975 ID=MS.gene073185.t1.exon1;Parent=MS.gene073185.t1
chr2.3 CDS 14241975 14243354 14241975 ID=cds.MS.gene073185.t1;Parent=MS.gene073185.t1
Gene Sequence

>MS.gene073185

ATGGATGCTCCTTCACCTTTGCACATAGCAATGTTTCCATGGTTTGCTATGGGACACTTGACACCATATCTTCACTTCTCCAACAAGTTAGCAATAAGAGGTCACAAAATCTCATTCTTCATCCCTAAAAATACACTCAACAAGTTACAACATCTCAATCTTCATCCAAATCTTATTACCTTTTTCCCTATCACAGTTCCTCATGTTAATGGCCTTCCTCATAATGCTGAAACAACTTCAGATGTACCATTTTCTTTATTCCCTCTTATTGCTACAGCCATGGATCAAACAGATAAACAAATTGAACTTCTTTTGAAGGAGTTAAAGCCACAAATAGTTTTCTTTGATTTTCAATATTGGCTACCAAACTTTACTCAAAAACTTGGCATCAAATGTCTCCAATACATGATATTCGGTCCAATATTACCAGCTTACTTTGGAAATATAAAAAGACAAAACCAAGGTAGAGATTTAACTGAAGTTGATCTCAAGAAACATCCTTCAGAGTTCCCTGATGATTCATGCATCAAGTTTCATTCTCACGAACTTCGATTCCTAGCTTCAGTAAGCAAACTAGAGTTTGGCAGTGGTCTTCTATTATACGATCGCATTGGAATAGGAACAAACTTGTCAGATGCAGTTGCTTTCAAAGGTTGTAGAGAAATTGATGGGATATATGCTGACTATCTTCAAACTGTTTATGGAAAACCTGTTCTGCTTTCAGGTCCTCTTTTACCTGAGCCACCAAATACAACTTTAGAGGAAAAATGGGTTGCATGGCTTAAGGGATTCGAACATGGTTCTGTGGTTTATTGTGCATATGGAAGTGAAAGTCCATTACAGCATAATCAGTTTCTAGAGCTGTTGCTTGGTCTTGAATTAACAGGTTTTCCATTTCTTGCAGCACTTAAGCCACCTATTGGATTTGAGTTGATTGAAGATGCTTTACCTGAAGGGTTTAGTGAAAGGGTTAAAGGAAAAGGGATTGTTTATGGAAGTTGGATTCAACAACAATTGATTTTAGAACACCCTTCTGTTGGATGTTTCATAACACACTGTGGAGCTGCTTCTATAACTGAGGGACTTGTTAACACGTGTCAGTTGGTGCTATTGCCACGTCTTGGTTCCGATCATATCATGAATGCAAGAGTGATGAGTACAAAGTTGAAGGTTGGTATAGAAGTTGAGAAAGGTGATGAAGATGGGTTGTTTACAAAAGAAAGTGTGTGCAAAGCTGTGAAGATTGTGATGGATGATGAGAATGAGGTTGGAAGGGAAGTGAGAGCAAATCATGCAAAAATGAGAAACTTCCTCCTTAGCAACAATTTAGAATCATCATGTGTTGATAGTTTCTGTCAGAAACTTTATCATTTGCTCTAG

Protein sequence

>MS.gene073185.t1

MDAPSPLHIAMFPWFAMGHLTPYLHFSNKLAIRGHKISFFIPKNTLNKLQHLNLHPNLITFFPITVPHVNGLPHNAETTSDVPFSLFPLIATAMDQTDKQIELLLKELKPQIVFFDFQYWLPNFTQKLGIKCLQYMIFGPILPAYFGNIKRQNQGRDLTEVDLKKHPSEFPDDSCIKFHSHELRFLASVSKLEFGSGLLLYDRIGIGTNLSDAVAFKGCREIDGIYADYLQTVYGKPVLLSGPLLPEPPNTTLEEKWVAWLKGFEHGSVVYCAYGSESPLQHNQFLELLLGLELTGFPFLAALKPPIGFELIEDALPEGFSERVKGKGIVYGSWIQQQLILEHPSVGCFITHCGAASITEGLVNTCQLVLLPRLGSDHIMNARVMSTKLKVGIEVEKGDEDGLFTKESVCKAVKIVMDDENEVGREVRANHAKMRNFLLSNNLESSCVDSFCQKLYHLL