AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene065246


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene065246.t1 MTR_2g083420 89.083 458 26 1 1 458 1 434 0.0 840
MS.gene065246.t1 MTR_2g083390 88.210 458 30 1 1 458 1 434 0.0 836
MS.gene065246.t1 MTR_2g083480 84.934 458 69 0 1 458 1 458 0.0 792
MS.gene065246.t1 MTR_2g083430 78.821 458 97 0 1 458 1 458 0.0 731
MS.gene065246.t1 MTR_2g083380 67.031 458 151 0 1 458 18 475 0.0 625
MS.gene065246.t1 MTR_2g083490 66.594 458 153 0 1 458 1 458 0.0 624
MS.gene065246.t1 MTR_2g083360 68.433 453 38 4 6 458 27 374 0.0 590
MS.gene065246.t1 MTR_4g079250 61.304 460 174 3 1 458 1 458 0.0 582
MS.gene065246.t1 MTR_4g079270 60.435 460 178 3 1 458 1 458 0.0 574
MS.gene065246.t1 MTR_2g014900 58.758 451 185 1 8 458 7 456 0.0 547
MS.gene065246.t1 MTR_1g090270 42.241 464 242 13 7 457 14 464 1.17e-114 345
MS.gene065246.t1 MTR_2g086283 58.103 253 54 2 205 457 135 335 1.49e-93 286
MS.gene065246.t1 MTR_2g086283 63.504 137 49 1 11 147 1 136 1.29e-51 177
MS.gene065246.t1 MTR_4g059370 40.549 328 174 8 141 457 74 391 1.29e-77 247
MS.gene065246.t1 MTR_8g068330 31.635 471 302 13 1 458 1 464 1.52e-67 223
MS.gene065246.t1 MTR_8g068360 32.272 471 296 14 2 458 6 467 1.35e-64 216
MS.gene065246.t1 MTR_7g067330 30.687 466 267 14 2 454 3 425 2.22e-63 211
MS.gene065246.t1 MTR_8g068340 30.490 469 300 11 2 454 6 464 9.63e-63 211
MS.gene065246.t1 MTR_2g014930 42.215 289 87 5 17 305 9 217 1.01e-62 203
MS.gene065246.t1 MTR_2g008226 32.836 469 285 15 6 454 8 466 5.21e-61 206
MS.gene065246.t1 MTR_7g067120 30.303 462 268 14 2 451 3 422 1.05e-60 204
MS.gene065246.t1 MTR_2g008225 30.258 466 302 12 2 455 9 463 2.93e-59 201
MS.gene065246.t1 MTR_2g008220 30.538 465 302 12 2 455 8 462 3.36e-59 201
MS.gene065246.t1 MTR_4g123553 31.169 462 288 15 6 454 13 457 4.23e-59 201
MS.gene065246.t1 MTR_6g036650 30.720 472 294 15 1 454 11 467 8.60e-57 195
MS.gene065246.t1 MTR_6g042310 30.538 465 285 16 7 454 17 460 2.33e-54 188
MS.gene065246.t1 MTR_4g079280 42.105 228 87 3 11 238 1 183 2.55e-53 177
MS.gene065246.t1 MTR_2g046620 30.217 460 295 13 6 454 14 458 5.33e-53 185
MS.gene065246.t1 MTR_2g083440 75.490 102 25 0 357 458 11 112 4.09e-51 169
MS.gene065246.t1 MTR_8g007650 30.995 442 273 13 7 428 6 435 4.49e-47 169
MS.gene065246.t1 MTR_8g007565 30.769 442 274 13 7 428 6 435 5.29e-47 169
MS.gene065246.t1 MTR_4g077960 29.213 445 283 15 17 447 1 427 5.47e-46 166
MS.gene065246.t1 MTR_1g090280 43.269 208 106 5 261 457 108 314 1.34e-45 161
MS.gene065246.t1 MTR_5g066410 28.145 469 285 12 11 456 1 440 8.09e-43 157
MS.gene065246.t1 MTR_8g071070 27.651 481 307 16 5 457 4 471 3.40e-35 136
MS.gene065246.t1 MTR_8g066610 27.682 466 289 17 1 433 1 451 1.02e-34 135
MS.gene065246.t1 MTR_8g009050 28.298 470 263 16 7 434 5 442 1.38e-31 126
MS.gene065246.t1 MTR_6g023665 28.348 448 275 14 9 427 14 444 1.83e-31 126
MS.gene065246.t1 MTR_5g087620 26.483 472 272 19 8 427 10 458 1.88e-31 126
MS.gene065246.t1 MTR_8g009055 28.632 468 264 16 7 434 5 442 3.29e-31 125
MS.gene065246.t1 MTR_6g488280 29.915 468 242 19 9 427 7 437 3.40e-30 122
MS.gene065246.t1 MTR_0428s0010 29.915 468 242 19 9 427 7 437 3.40e-30 122
MS.gene065246.t1 MTR_2g098430 24.255 470 291 16 9 437 7 452 1.25e-29 121
MS.gene065246.t1 MTR_4g485590 28.606 409 234 15 8 394 9 381 1.59e-29 119
MS.gene065246.t1 MTR_7g070660 25.275 455 294 15 7 428 10 451 1.74e-29 120
MS.gene065246.t1 MTR_4g031800 26.543 486 304 17 6 458 7 472 2.03e-29 120
MS.gene065246.t1 MTR_0009s0240 26.429 420 265 14 5 399 4 404 8.79e-29 118
MS.gene065246.t1 MTR_8g465670 26.940 464 254 17 9 424 8 434 9.81e-29 118
MS.gene065246.t1 MTR_8g027885 29.318 440 269 17 6 421 16 437 1.20e-28 118
MS.gene065246.t1 MTR_8g027870 29.621 449 256 16 6 421 16 437 2.44e-28 117
MS.gene065246.t1 MTR_1g062380 25.431 464 295 18 5 428 13 465 7.76e-28 116
MS.gene065246.t1 MTR_3g435310 36.788 193 115 4 258 450 227 412 1.05e-27 114
MS.gene065246.t1 MTR_3g435310 31.429 140 88 5 6 139 16 153 3.01e-14 74.7
MS.gene065246.t1 MTR_6g033615 26.711 453 274 16 9 434 5 426 2.03e-27 114
MS.gene065246.t1 MTR_3g009510 33.180 217 126 4 236 436 241 454 2.30e-27 114
MS.gene065246.t1 MTR_7g013220 25.641 468 281 20 8 444 5 436 2.33e-27 114
MS.gene065246.t1 MTR_8g006270 29.710 276 164 7 167 428 178 437 3.17e-27 114
MS.gene065246.t1 MTR_7g070740 25.000 464 296 15 7 433 10 458 7.75e-27 113
MS.gene065246.t1 MTR_5g045970 26.496 468 289 18 5 432 13 465 1.52e-26 112
MS.gene065246.t1 MTR_0184s0030 36.058 208 110 6 237 425 234 437 2.45e-26 111
MS.gene065246.t1 MTR_8g008990 27.922 462 277 18 7 434 5 444 3.84e-26 110
MS.gene065246.t1 MTR_7g070610 24.197 467 297 14 7 433 12 461 3.88e-26 111
MS.gene065246.t1 MTR_7g117170 36.842 190 104 5 257 434 266 451 4.75e-26 110
MS.gene065246.t1 MTR_0184s0040 26.407 462 285 16 7 436 20 458 6.64e-26 110
MS.gene065246.t1 MTR_0078s0190 26.407 462 285 16 7 436 20 458 6.64e-26 110
MS.gene065246.t1 MTR_8g006710 26.667 465 262 17 9 427 7 438 6.81e-26 110
MS.gene065246.t1 MTR_8g006220 25.974 462 269 15 9 424 7 441 8.81e-26 110
MS.gene065246.t1 MTR_6g033625 26.350 463 277 17 9 434 5 440 1.05e-25 109
MS.gene065246.t1 MTR_2g046820 35.096 208 123 4 257 454 257 462 1.13e-25 109
MS.gene065246.t1 MTR_7g070810 25.850 441 292 13 7 421 8 439 1.16e-25 109
MS.gene065246.t1 MTR_7g055710 25.160 469 289 16 7 433 10 458 1.59e-25 109
MS.gene065246.t1 MTR_4g485620 26.018 442 285 14 20 433 1 428 2.59e-25 108
MS.gene065246.t1 MTR_8g006730 26.608 451 283 15 8 427 6 439 3.03e-25 108
MS.gene065246.t1 MTR_6g038220 24.781 456 289 17 8 440 11 435 5.85e-25 107
MS.gene065246.t1 MTR_8g009073 27.158 475 260 20 7 434 5 440 5.93e-25 107
MS.gene065246.t1 MTR_7g013200 25.333 450 285 15 8 437 5 423 7.12e-25 107
MS.gene065246.t1 MTR_0078s0060 30.075 266 155 8 184 436 195 442 7.26e-25 107
MS.gene065246.t1 MTR_8g012635 30.605 281 158 9 166 427 182 444 1.33e-24 106
MS.gene065246.t1 MTR_8g009063 26.539 471 271 17 7 436 12 448 1.72e-24 106
MS.gene065246.t1 MTR_7g046490 35.938 192 109 4 253 432 250 439 1.74e-24 105
MS.gene065246.t1 MTR_7g013180 26.398 447 256 18 8 419 5 413 2.00e-24 105
MS.gene065246.t1 MTR_1g019520 36.782 174 97 3 257 419 4 175 5.23e-24 100
MS.gene065246.t1 MTR_7g117405 26.866 469 275 20 8 433 12 455 6.66e-24 104
MS.gene065246.t1 MTR_6g005600 36.269 193 106 4 255 434 255 443 6.97e-24 104
MS.gene065246.t1 MTR_6g033725 31.646 237 140 7 216 434 205 437 8.74e-24 103
MS.gene065246.t1 MTR_2g040530 33.654 208 126 4 257 454 259 464 1.10e-23 103
MS.gene065246.t1 MTR_4g117980 24.891 458 281 17 6 421 9 445 1.34e-23 103
MS.gene065246.t1 MTR_4g485630 25.161 465 289 17 7 433 8 451 1.38e-23 103
MS.gene065246.t1 MTR_2g046750 35.096 208 123 4 257 454 260 465 1.42e-23 103
MS.gene065246.t1 MTR_8g012650 32.110 218 127 5 235 435 235 448 1.54e-23 103
MS.gene065246.t1 MTR_4g024020 25.442 452 292 15 7 421 8 451 1.75e-23 103
MS.gene065246.t1 MTR_0078s0010 35.676 185 107 4 253 427 254 436 2.00e-23 102
MS.gene065246.t1 MTR_6g038200 24.336 452 289 18 8 436 11 432 2.13e-23 102
MS.gene065246.t1 MTR_5g098930 23.494 498 301 16 7 456 4 469 2.21e-23 102
MS.gene065246.t1 MTR_6g038230 25.159 473 267 18 8 440 11 436 3.15e-23 102
MS.gene065246.t1 MTR_8g012730 31.048 248 141 7 228 457 69 304 3.31e-23 100
MS.gene065246.t1 MTR_7g070910 23.256 473 298 16 5 433 8 459 4.51e-23 102
MS.gene065246.t1 MTR_8g006260 28.889 270 162 10 184 435 198 455 5.65e-23 101
MS.gene065246.t1 MTR_7g102460 25.926 459 278 20 7 421 8 448 7.36e-23 101
MS.gene065246.t1 MTR_8g009073 33.953 215 124 7 234 434 101 311 8.03e-23 99.4
MS.gene065246.t1 MTR_1g019510 36.207 174 98 3 257 419 255 426 1.19e-22 100
MS.gene065246.t1 MTR_8g009067 35.106 188 108 5 257 434 139 322 1.32e-22 99.0
MS.gene065246.t1 MTR_4g117950 25.000 452 274 17 6 421 4 426 1.34e-22 100
MS.gene065246.t1 MTR_8g009067 35.106 188 108 5 257 434 257 440 2.18e-22 99.8
MS.gene065246.t1 MTR_8g074550 22.764 492 294 19 1 434 1 464 2.59e-22 99.8
MS.gene065246.t1 MTR_5g035560 24.375 480 297 19 7 456 10 453 3.08e-22 99.8
MS.gene065246.t1 MTR_8g466240 26.087 437 244 19 1 397 1 398 3.75e-22 99.0
MS.gene065246.t1 MTR_7g071040 23.191 470 302 17 5 433 14 465 4.35e-22 99.4
MS.gene065246.t1 MTR_5g019580 29.630 270 159 7 183 433 198 455 4.51e-22 99.0
MS.gene065246.t1 MTR_5g019580 29.630 270 159 7 183 433 222 479 4.75e-22 99.0
MS.gene065246.t1 MTR_7g013240 26.030 461 268 22 8 440 6 421 7.62e-22 97.8
MS.gene065246.t1 MTR_1g107350 24.625 467 296 19 1 434 1 444 8.20e-22 98.2
MS.gene065246.t1 MTR_8g012630 34.225 187 105 5 257 427 204 388 9.19e-22 97.4
MS.gene065246.t1 MTR_8g044140 25.389 386 240 12 64 416 37 407 9.98e-22 97.8
MS.gene065246.t1 MTR_7g070800 22.826 460 312 12 5 433 3 450 1.32e-21 97.8
MS.gene065246.t1 MTR_7g070780 24.249 466 301 14 5 433 8 458 1.42e-21 97.4
MS.gene065246.t1 MTR_7g102490 25.658 456 285 18 7 421 8 450 1.61e-21 97.4
MS.gene065246.t1 MTR_7g047030 34.375 192 112 5 253 434 254 441 1.68e-21 97.1
MS.gene065246.t1 MTR_7g047270 34.375 192 112 5 253 434 254 441 1.68e-21 97.1
MS.gene065246.t1 MTR_6g038240 31.868 182 113 6 254 435 261 431 2.21e-21 96.7
MS.gene065246.t1 MTR_5g090610 27.626 257 160 6 206 438 190 444 2.72e-21 96.7
MS.gene065246.t1 MTR_4g082820 24.828 435 294 12 7 419 6 429 2.82e-21 96.7
MS.gene065246.t1 MTR_3g069690 28.571 238 152 6 207 434 196 425 3.09e-21 96.3
MS.gene065246.t1 MTR_8g077590 32.195 205 128 3 237 432 240 442 4.60e-21 95.9
MS.gene065246.t1 MTR_6g033675 29.508 244 156 7 203 434 201 440 4.80e-21 95.9
MS.gene065246.t1 MTR_0536s0010 25.591 465 254 22 6 421 19 440 5.08e-21 95.9
MS.gene065246.t1 MTR_7g102550 25.000 464 295 18 8 432 9 458 5.32e-21 95.9
MS.gene065246.t1 MTR_3g049970 25.000 456 304 15 3 434 4 445 6.20e-21 95.5
MS.gene065246.t1 MTR_5g035580 30.918 207 133 5 252 458 257 453 6.96e-21 95.1
MS.gene065246.t1 MTR_5g090700 28.077 260 155 8 206 438 206 460 7.45e-21 95.5
MS.gene065246.t1 MTR_7g013260 25.000 456 280 18 8 440 6 422 8.91e-21 94.7
MS.gene065246.t1 MTR_5g045960 25.891 421 263 15 7 394 8 412 9.06e-21 95.1
MS.gene065246.t1 MTR_6g033660 32.653 196 125 5 241 434 249 439 1.11e-20 94.7
MS.gene065246.t1 MTR_4g128720 24.738 477 280 18 7 444 14 450 1.44e-20 94.4
MS.gene065246.t1 MTR_3g079480 25.107 466 274 21 8 427 21 457 1.63e-20 94.4
MS.gene065246.t1 MTR_4g082810 27.143 420 260 15 7 397 6 408 1.71e-20 93.6
MS.gene065246.t1 MTR_4g485640 24.256 437 290 15 18 428 219 640 2.06e-20 94.7
MS.gene065246.t1 MTR_5g090660 29.204 226 137 7 234 438 233 456 2.84e-20 94.0
MS.gene065246.t1 MTR_7g102560 24.473 474 289 17 1 427 1 452 3.46e-20 93.2
MS.gene065246.t1 MTR_2g059240 23.965 459 300 12 2 431 8 446 3.52e-20 93.2
MS.gene065246.t1 MTR_4g128690 32.547 212 129 6 210 419 216 415 3.87e-20 92.8
MS.gene065246.t1 MTR_7g102450 25.702 463 268 19 8 427 11 440 4.33e-20 93.2
MS.gene065246.t1 MTR_5g098960 34.146 205 110 8 257 454 260 446 7.29e-20 92.0
MS.gene065246.t1 MTR_8g008970 33.511 188 111 4 257 434 257 440 7.75e-20 93.2
MS.gene065246.t1 MTR_8g008970 32.597 181 108 5 257 436 596 763 2.34e-16 82.4
MS.gene065246.t1 MTR_8g012745 29.391 279 161 11 166 427 182 441 8.62e-20 92.0
MS.gene065246.t1 MTR_7g102520 25.397 441 279 15 7 413 11 435 9.41e-20 92.0
MS.gene065246.t1 MTR_5g039900 22.976 457 302 14 7 428 12 453 1.03e-19 92.0
MS.gene065246.t1 MTR_3g009490 33.533 167 95 4 283 436 3 166 1.16e-19 87.0
MS.gene065246.t1 MTR_8g088560 33.155 187 117 6 252 438 259 437 1.33e-19 91.3
MS.gene065246.t1 MTR_3g084540 29.843 191 122 4 253 436 266 451 1.40e-19 91.3
MS.gene065246.t1 MTR_7g070940 24.000 450 309 14 7 433 8 447 2.09e-19 90.9
MS.gene065246.t1 MTR_7g070930 22.547 479 308 16 1 433 1 462 2.62e-19 90.9
MS.gene065246.t1 MTR_5g067170 32.275 189 111 5 253 425 262 449 2.84e-19 90.5
MS.gene065246.t1 MTR_8g083290 32.961 179 113 5 257 434 267 439 3.98e-19 90.1
MS.gene065246.t1 MTR_2g034990 22.857 455 304 15 1 421 4 445 4.35e-19 90.1
MS.gene065246.t1 MTR_1g107315 32.692 208 122 8 219 412 221 424 4.40e-19 90.1
MS.gene065246.t1 MTR_7g071050 22.814 469 292 16 7 455 12 430 4.90e-19 89.4
MS.gene065246.t1 MTR_8g083280 29.310 232 130 8 241 449 249 469 6.09e-19 89.4
MS.gene065246.t1 MTR_5g090620 27.049 244 147 6 224 438 218 459 6.89e-19 89.4
MS.gene065246.t1 MTR_5g027210 24.723 271 167 6 212 450 212 477 1.01e-18 89.0
MS.gene065246.t1 MTR_7g080940 22.838 451 301 16 5 436 8 430 1.45e-18 88.2
MS.gene065246.t1 MTR_3g069710 29.344 259 168 9 208 457 202 454 1.57e-18 88.2
MS.gene065246.t1 MTR_7g080950 32.979 188 114 7 253 440 253 428 1.79e-18 87.8
MS.gene065246.t1 MTR_1g107360 31.373 204 128 5 232 434 245 437 1.99e-18 87.8
MS.gene065246.t1 MTR_3g084530 29.843 191 121 5 253 436 266 450 2.26e-18 87.8
MS.gene065246.t1 MTR_6g013900 25.723 346 218 13 107 427 116 447 2.28e-18 87.8
MS.gene065246.t1 MTR_5g090630 28.767 219 133 6 241 438 233 449 3.12e-18 87.4
MS.gene065246.t1 MTR_3g084520 27.397 219 130 6 241 436 238 450 3.12e-18 87.4
MS.gene065246.t1 MTR_2g035020 23.632 457 298 18 1 421 4 445 3.18e-18 87.4
MS.gene065246.t1 MTR_5g090580 25.769 260 161 7 206 438 204 458 3.27e-18 87.4
MS.gene065246.t1 MTR_4g117960 24.348 460 288 18 1 421 6 444 3.42e-18 87.4
MS.gene065246.t1 MTR_5g090670 27.602 221 135 6 241 438 242 460 3.54e-18 87.0
MS.gene065246.t1 MTR_4g108250 22.747 466 306 13 7 432 10 461 3.62e-18 87.4
MS.gene065246.t1 MTR_0536s0020 24.948 485 298 21 7 448 17 478 3.84e-18 87.0
MS.gene065246.t1 MTR_3g479520 24.008 479 284 21 1 427 1 451 4.07e-18 87.0
MS.gene065246.t1 MTR_6g011340 23.676 321 217 10 108 405 118 433 4.55e-18 87.0
MS.gene065246.t1 MTR_4g008630 26.772 254 168 7 199 437 191 441 5.02e-18 86.7
MS.gene065246.t1 MTR_8g032950 23.144 458 298 17 6 427 10 449 5.05e-18 86.7
MS.gene065246.t1 MTR_6g038300 30.055 183 118 5 254 436 261 433 5.50e-18 86.7
MS.gene065246.t1 MTR_8g064880 24.615 455 267 19 5 412 6 431 8.79e-18 85.9
MS.gene065246.t1 MTR_7g080935 23.503 451 294 17 7 436 10 430 9.60e-18 85.9
MS.gene065246.t1 MTR_1g029540 21.924 447 300 13 13 437 19 438 1.30e-17 85.5
MS.gene065246.t1 MTR_5g040030 25.490 255 162 7 198 428 207 457 1.51e-17 85.5
MS.gene065246.t1 MTR_7g070860 22.101 457 301 12 7 433 6 437 1.61e-17 85.1
MS.gene065246.t1 MTR_7g070870 23.529 408 282 12 4 394 15 409 1.64e-17 85.1
MS.gene065246.t1 MTR_4g094920 27.885 208 141 6 253 454 275 479 1.91e-17 85.1
MS.gene065246.t1 MTR_2g035040 30.412 194 116 5 257 436 173 361 2.08e-17 84.3
MS.gene065246.t1 MTR_5g070040 28.727 275 167 12 166 427 184 442 2.63e-17 84.3
MS.gene065246.t1 MTR_5g016660 22.128 470 283 17 12 427 14 454 2.72e-17 84.3
MS.gene065246.t1 MTR_8g090095 27.642 246 160 7 208 438 217 459 2.87e-17 84.3
MS.gene065246.t1 MTR_1g032490 35.625 160 95 5 257 412 271 426 3.22e-17 84.3
MS.gene065246.t1 MTR_0288s0020 24.940 417 262 17 8 395 10 404 3.35e-17 84.0
MS.gene065246.t1 MTR_4g095008 29.586 169 112 5 253 417 260 425 3.81e-17 84.3
MS.gene065246.t1 MTR_5g072820 24.215 446 288 17 8 434 10 424 4.85e-17 83.6
MS.gene065246.t1 MTR_5g029800 30.769 182 111 4 250 417 257 437 4.85e-17 83.6
MS.gene065246.t1 MTR_7g470610 27.812 320 176 13 120 418 5 290 5.05e-17 81.6
MS.gene065246.t1 MTR_7g070583 27.812 320 176 13 120 418 5 290 5.05e-17 81.6
MS.gene065246.t1 MTR_6g014170 27.835 194 130 5 253 446 266 449 5.11e-17 83.6
MS.gene065246.t1 MTR_8g064870 32.447 188 117 6 253 434 266 449 5.80e-17 83.6
MS.gene065246.t1 MTR_7g012120 29.897 194 120 5 250 428 263 455 6.91e-17 83.2
MS.gene065246.t1 MTR_6g013960 22.459 423 292 11 8 399 10 427 7.40e-17 83.2
MS.gene065246.t1 MTR_7g011470 22.581 465 313 11 8 446 10 453 1.00e-16 82.8
MS.gene065246.t1 MTR_6g014220 22.059 476 314 16 8 446 10 465 1.22e-16 82.4
MS.gene065246.t1 MTR_0891s0010 26.852 216 140 6 221 427 52 258 1.30e-16 80.5
MS.gene065246.t1 MTR_6g035265 28.358 201 121 6 254 434 256 453 1.40e-16 82.4
MS.gene065246.t1 MTR_6g013920 25.077 323 201 13 131 427 140 447 1.76e-16 82.0
MS.gene065246.t1 MTR_6g035185 21.935 465 308 15 1 427 4 451 1.94e-16 82.0
MS.gene065246.t1 MTR_3g479610 28.655 171 113 4 257 427 120 281 1.98e-16 80.5
MS.gene065246.t1 MTR_5g058320 23.861 461 268 19 4 420 7 428 2.59e-16 81.3
MS.gene065246.t1 MTR_7g011470 28.571 196 126 6 253 446 266 449 3.64e-16 80.9
MS.gene065246.t1 MTR_1g107375 30.769 195 123 5 240 434 247 429 5.03e-16 80.5
MS.gene065246.t1 MTR_3g479490 23.567 471 277 22 7 427 5 442 5.31e-16 80.5
MS.gene065246.t1 MTR_6g014020 28.571 182 120 5 253 434 284 455 5.69e-16 80.5
MS.gene065246.t1 MTR_5g090600 24.803 254 159 7 216 445 199 444 5.86e-16 80.1
MS.gene065246.t1 MTR_6g035295 20.435 460 310 13 7 427 11 453 9.38e-16 79.7
MS.gene065246.t1 MTR_5g072860 21.225 457 307 14 8 439 18 446 1.06e-15 79.7
MS.gene065246.t1 MTR_1g107285 32.530 166 101 4 249 412 263 419 1.58e-15 79.0
MS.gene065246.t1 MTR_5g072830 23.884 448 287 19 8 434 10 424 2.07e-15 78.6
MS.gene065246.t1 MTR_6g013990 25.824 182 125 5 253 434 282 453 2.71e-15 78.2
MS.gene065246.t1 MTR_8g056740 24.893 233 159 5 210 431 111 338 2.73e-15 77.8
MS.gene065246.t1 MTR_3g008010 27.979 193 123 7 257 446 286 465 2.99e-15 78.2
MS.gene065246.t1 MTR_6g014190 30.769 169 105 5 253 419 91 249 3.71e-15 76.3
MS.gene065246.t1 MTR_1g040310 21.429 462 278 17 7 416 14 442 4.01e-15 77.8
MS.gene065246.t1 MTR_6g014200 23.542 463 301 17 8 434 7 452 4.17e-15 77.8
MS.gene065246.t1 MTR_6g014270 21.308 474 300 18 8 434 7 454 4.36e-15 77.8
MS.gene065246.t1 MTR_1g107365 30.636 173 109 4 240 412 286 447 5.13e-15 77.4
MS.gene065246.t1 MTR_5g072810 22.444 450 294 19 8 434 12 429 6.83e-15 77.0
MS.gene065246.t1 MTR_8g059425 23.820 466 294 22 8 434 10 453 7.11e-15 77.0
MS.gene065246.t1 MTR_5g072840 22.697 445 296 17 8 434 10 424 1.02e-14 76.3
MS.gene065246.t1 MTR_6g014250 27.778 180 116 6 257 434 286 453 1.11e-14 76.3
MS.gene065246.t1 MTR_8g007585 27.604 192 125 6 257 446 200 379 1.12e-14 75.9
MS.gene065246.t1 MTR_5g016480 33.036 112 73 2 251 361 267 377 1.27e-14 76.3
MS.gene065246.t1 MTR_4g117890 27.354 223 136 7 257 456 260 479 1.35e-14 76.3
MS.gene065246.t1 MTR_3g031450 24.545 220 142 4 220 427 213 420 1.75e-14 75.9
MS.gene065246.t1 MTR_6g014310 24.590 305 195 12 147 434 170 456 2.44e-14 75.5
MS.gene065246.t1 MTR_5g004940 32.090 134 89 2 242 374 182 314 3.89e-14 74.3
MS.gene065246.t1 MTR_6g013450 22.894 463 284 18 4 419 7 443 4.73e-14 74.3
MS.gene065246.t1 MTR_6g014050 28.022 182 117 6 255 434 287 456 7.71e-14 73.9
MS.gene065246.t1 MTR_6g014240 26.923 182 123 5 253 434 251 422 1.05e-13 73.2
MS.gene065246.t1 MTR_4g118000 22.247 445 285 17 6 417 10 426 1.57e-13 72.8
MS.gene065246.t1 MTR_6g014040 27.473 182 122 5 253 434 285 456 5.17e-13 71.2
MS.gene065246.t1 MTR_8g009840 30.476 210 124 5 224 419 289 490 5.34e-13 71.2
MS.gene065246.t1 MTR_7g039550 24.000 250 159 7 220 447 5 245 7.90e-13 68.9
MS.gene065246.t1 MTR_6g014150 28.859 149 99 4 253 399 281 424 8.85e-13 70.5
MS.gene065246.t1 MTR_6g014187 22.979 470 295 21 8 434 10 455 9.32e-13 70.5
MS.gene065246.t1 MTR_6g078320 27.179 195 132 2 236 420 252 446 1.31e-12 70.1
MS.gene065246.t1 MTR_7g080900 30.899 178 103 7 257 429 264 426 1.55e-12 69.7
MS.gene065246.t1 MTR_4g064987 28.936 235 141 10 212 432 205 427 2.58e-12 68.9
MS.gene065246.t1 MTR_0036s0220 22.976 457 294 20 8 428 12 446 2.66e-12 68.9
MS.gene065246.t1 MTR_4g064987 28.936 235 141 10 212 432 199 421 3.14e-12 68.6
MS.gene065246.t1 MTR_2086s0010 26.846 149 100 4 279 427 1 140 5.02e-12 64.7
MS.gene065246.t1 MTR_1996s0010 26.846 149 100 4 279 427 1 140 5.02e-12 64.7
MS.gene065246.t1 MTR_6g014290 25.000 192 130 6 257 446 286 465 6.79e-12 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene065246.t1 AT5G54010 45.055 455 239 6 5 458 3 447 1.00e-143 419
MS.gene065246.t1 AT4G27570 44.518 456 235 7 7 458 6 447 1.90e-143 418
MS.gene065246.t1 AT5G53990 45.033 453 232 6 7 458 5 441 1.81e-141 413
MS.gene065246.t1 AT4G27560 44.615 455 234 7 8 458 7 447 3.10e-141 412
MS.gene065246.t1 AT5G54060 44.685 461 244 7 5 458 10 466 8.38e-140 409
MS.gene065246.t1 AT2G22930 45.033 453 232 6 7 458 5 441 6.21e-139 406
MS.gene065246.t1 AT4G09500 43.929 453 237 6 7 458 5 441 1.41e-137 403
MS.gene065246.t1 AT1G64920 43.982 457 235 6 7 458 5 445 1.41e-137 403
MS.gene065246.t1 AT1G64910 43.709 453 238 6 7 458 5 441 8.58e-136 398
MS.gene065246.t1 AT3G29630 43.860 456 232 7 5 454 3 440 4.89e-135 396
MS.gene065246.t1 AT3G29630 43.267 453 213 7 5 454 3 414 1.33e-128 379
MS.gene065246.t1 AT4G09500 42.257 452 221 7 7 458 5 416 5.09e-125 370
MS.gene065246.t1 AT1G50580 41.758 455 241 7 5 454 3 438 4.76e-122 363
MS.gene065246.t1 AT2G22590 34.914 464 275 17 7 454 14 466 9.44e-70 229
MS.gene065246.t1 AT5G65550 31.667 480 281 19 1 454 1 459 1.24e-64 216
MS.gene065246.t1 AT5G49690 31.498 454 290 11 7 452 9 449 1.67e-64 215
MS.gene065246.t1 AT2G22930 40.092 217 116 3 7 223 5 207 4.97e-51 175
MS.gene065246.t1 AT2G22930 35.238 105 63 3 357 458 187 289 9.64e-13 68.9
MS.gene065246.t1 AT5G12890 26.915 483 274 19 4 437 6 458 1.15e-33 132
MS.gene065246.t1 AT5G03490 25.664 452 284 13 6 435 17 438 8.02e-33 130
MS.gene065246.t1 AT1G73880 27.230 426 261 14 2 399 8 412 2.16e-32 129
MS.gene065246.t1 AT4G36770 28.384 458 279 18 7 435 3 440 9.21e-32 127
MS.gene065246.t1 AT4G34131 26.623 462 291 16 2 428 4 452 1.90e-31 126
MS.gene065246.t1 AT1G51210 26.879 439 282 14 8 433 20 432 2.58e-31 125
MS.gene065246.t1 AT2G16890 27.586 464 294 20 8 445 9 456 1.39e-30 124
MS.gene065246.t1 AT2G15480 25.490 459 302 13 7 434 9 458 3.18e-30 123
MS.gene065246.t1 AT2G15480 25.828 453 296 13 7 428 9 452 7.87e-30 121
MS.gene065246.t1 AT2G15490 26.419 458 291 16 7 430 6 451 1.07e-29 121
MS.gene065246.t1 AT2G15490 26.464 461 290 17 7 430 6 454 1.15e-29 121
MS.gene065246.t1 AT1G05675 27.232 448 280 16 8 434 6 428 1.20e-28 117
MS.gene065246.t1 AT4G34135 28.322 459 253 21 7 416 10 441 2.23e-28 117
MS.gene065246.t1 AT2G18570 25.380 461 298 14 1 434 1 442 4.50e-28 116
MS.gene065246.t1 AT2G36800 27.862 463 283 19 5 427 9 460 4.80e-28 116
MS.gene065246.t1 AT2G16890 27.336 428 274 18 8 412 9 422 9.84e-28 115
MS.gene065246.t1 AT1G10400 26.096 479 301 21 7 452 6 464 1.13e-27 115
MS.gene065246.t1 AT2G36770 27.174 460 287 18 6 427 12 461 1.91e-27 115
MS.gene065246.t1 AT4G34138 25.319 470 273 16 5 424 8 449 8.48e-27 113
MS.gene065246.t1 AT1G05680 26.339 448 284 15 8 434 6 428 1.01e-26 112
MS.gene065246.t1 AT2G36750 28.384 458 268 20 6 421 8 447 1.14e-26 112
MS.gene065246.t1 AT5G14860 25.755 497 304 17 1 454 1 475 2.09e-26 112
MS.gene065246.t1 AT2G31790 26.096 456 277 18 8 434 8 432 8.77e-26 109
MS.gene065246.t1 AT2G31750 25.000 460 293 16 1 436 1 432 1.31e-25 109
MS.gene065246.t1 AT2G31750 24.892 462 291 17 1 436 1 432 1.74e-25 109
MS.gene065246.t1 AT2G36780 27.015 459 287 19 7 427 13 461 2.23e-25 108
MS.gene065246.t1 AT2G18560 30.980 255 149 7 201 434 104 352 2.38e-25 107
MS.gene065246.t1 AT1G01420 35.981 214 116 6 236 434 235 442 9.09e-25 107
MS.gene065246.t1 AT1G01420 35.981 214 116 6 236 434 238 445 1.01e-24 107
MS.gene065246.t1 AT2G36760 26.638 458 277 17 6 421 12 452 4.49e-24 105
MS.gene065246.t1 AT3G53150 27.061 473 279 18 7 427 21 479 4.81e-24 105
MS.gene065246.t1 AT2G43820 24.359 468 291 17 8 449 7 437 5.30e-24 104
MS.gene065246.t1 AT4G01070 34.579 214 122 6 236 435 235 444 6.46e-24 104
MS.gene065246.t1 AT5G59580 25.758 462 305 17 8 454 9 447 9.55e-24 103
MS.gene065246.t1 AT3G50740 23.810 462 299 15 8 435 7 449 1.23e-23 103
MS.gene065246.t1 AT3G46670 24.319 477 312 16 2 457 3 451 1.78e-23 102
MS.gene065246.t1 AT3G53160 26.022 465 293 23 1 427 1 452 1.78e-22 100
MS.gene065246.t1 AT2G29730 25.821 457 289 17 7 433 4 440 4.34e-22 99.0
MS.gene065246.t1 AT5G59590 24.733 469 303 19 8 458 10 446 1.24e-21 97.4
MS.gene065246.t1 AT1G07250 27.341 267 179 7 203 456 210 474 1.41e-21 97.4
MS.gene065246.t1 AT5G66690 24.396 455 298 16 8 435 7 442 1.73e-21 97.4
MS.gene065246.t1 AT2G36970 23.503 451 313 14 8 437 10 449 1.80e-21 97.4
MS.gene065246.t1 AT2G36790 26.237 465 293 17 2 427 7 460 2.22e-21 97.1
MS.gene065246.t1 AT4G15280 30.556 216 132 4 257 456 294 507 2.56e-21 97.1
MS.gene065246.t1 AT4G15280 30.556 216 132 4 257 456 262 475 2.73e-21 96.7
MS.gene065246.t1 AT2G43840 31.579 190 120 4 259 448 257 436 3.37e-21 96.3
MS.gene065246.t1 AT2G43840 31.579 190 120 4 259 448 257 436 3.37e-21 96.3
MS.gene065246.t1 AT4G15480 31.364 220 133 8 227 434 241 454 5.63e-21 95.9
MS.gene065246.t1 AT3G21760 29.439 214 133 4 257 454 269 480 8.61e-21 95.1
MS.gene065246.t1 AT5G05880 26.067 445 282 18 1 425 1 418 1.92e-20 94.0
MS.gene065246.t1 AT5G26310 29.362 235 143 5 236 452 233 462 3.66e-20 93.2
MS.gene065246.t1 AT4G15260 28.571 217 136 4 257 456 142 356 3.95e-20 92.0
MS.gene065246.t1 AT2G30140 24.711 433 288 17 8 427 13 420 5.37e-20 92.4
MS.gene065246.t1 AT3G21800 29.767 215 132 4 257 454 263 475 7.09e-20 92.4
MS.gene065246.t1 AT2G30140 24.714 437 282 18 8 427 13 419 1.44e-19 91.3
MS.gene065246.t1 AT3G11340 23.991 446 284 16 9 434 10 420 1.54e-19 91.3
MS.gene065246.t1 AT1G01390 31.538 260 146 10 184 427 197 440 1.78e-19 91.3
MS.gene065246.t1 AT1G01390 31.538 260 146 10 184 427 214 457 2.10e-19 91.3
MS.gene065246.t1 AT3G21790 28.016 257 161 6 220 454 224 478 2.36e-19 90.9
MS.gene065246.t1 AT3G21750 28.216 241 151 5 236 456 232 470 2.58e-19 90.5
MS.gene065246.t1 AT3G46660 34.259 216 121 9 236 445 237 437 3.38e-19 90.1
MS.gene065246.t1 AT2G29710 31.959 194 120 7 245 433 254 440 3.81e-19 90.1
MS.gene065246.t1 AT2G30150 22.793 487 308 20 4 458 6 456 7.62e-19 89.0
MS.gene065246.t1 AT2G29740 32.500 200 125 6 236 427 250 447 1.13e-18 88.6
MS.gene065246.t1 AT5G05870 28.692 237 153 7 206 435 204 431 1.33e-18 88.6
MS.gene065246.t1 AT1G24100 29.688 192 126 4 257 448 266 448 1.45e-18 88.2
MS.gene065246.t1 AT4G15490 23.060 464 305 16 1 434 1 442 1.65e-18 88.2
MS.gene065246.t1 AT3G16520 32.787 183 112 4 257 435 261 436 1.78e-18 88.2
MS.gene065246.t1 AT4G15550 22.222 459 319 15 2 436 7 451 1.92e-18 88.2
MS.gene065246.t1 AT5G05890 29.339 242 154 8 201 434 198 430 1.94e-18 87.8
MS.gene065246.t1 AT3G16520 32.787 183 112 4 257 435 261 436 1.96e-18 87.8
MS.gene065246.t1 AT4G15500 31.492 181 114 6 257 435 267 439 2.09e-18 87.8
MS.gene065246.t1 AT3G16520 31.959 194 121 4 257 446 261 447 2.10e-18 87.8
MS.gene065246.t1 AT5G05860 24.615 455 294 16 7 445 8 429 2.40e-18 87.4
MS.gene065246.t1 AT3G21780 28.704 216 136 4 257 456 257 470 2.41e-18 87.8
MS.gene065246.t1 AT1G07260 28.384 229 152 6 236 454 245 471 3.02e-18 87.4
MS.gene065246.t1 AT3G21560 31.667 180 113 6 257 434 277 448 4.39e-18 87.0
MS.gene065246.t1 AT1G22360 24.043 470 291 19 8 436 10 454 1.04e-17 85.9
MS.gene065246.t1 AT3G22250 32.512 203 105 9 257 450 274 453 1.53e-17 85.1
MS.gene065246.t1 AT1G07240 30.290 241 153 9 227 458 242 476 1.84e-17 85.1
MS.gene065246.t1 AT3G55700 28.571 245 163 7 206 445 203 440 1.96e-17 84.7
MS.gene065246.t1 AT2G30150 24.901 253 170 6 215 458 199 440 3.34e-17 84.0
MS.gene065246.t1 AT2G29750 32.973 185 114 6 241 417 255 437 4.12e-17 84.0
MS.gene065246.t1 AT1G06000 24.088 411 242 15 8 394 10 374 4.64e-17 83.6
MS.gene065246.t1 AT2G23250 28.448 232 148 7 235 454 210 435 8.11e-17 82.8
MS.gene065246.t1 AT1G05530 25.391 256 163 7 222 455 206 455 8.38e-17 82.8
MS.gene065246.t1 AT5G38010 24.516 465 285 20 8 445 10 435 1.78e-16 82.0
MS.gene065246.t1 AT3G55710 30.688 189 122 5 259 445 263 444 2.24e-16 81.6
MS.gene065246.t1 AT1G22400 23.581 458 291 17 8 427 13 449 2.32e-16 81.6
MS.gene065246.t1 AT1G22360 24.065 428 266 17 8 394 10 419 1.81e-15 79.0
MS.gene065246.t1 AT2G23260 27.700 213 133 6 235 432 223 429 3.63e-15 77.8
MS.gene065246.t1 AT3G46690 29.500 200 131 6 202 394 196 392 4.10e-15 77.8
MS.gene065246.t1 AT1G05560 27.354 223 141 7 241 448 275 491 4.68e-15 77.8
MS.gene065246.t1 AT2G26480 25.163 461 281 21 8 445 8 427 5.56e-15 77.4
MS.gene065246.t1 AT2G28080 25.417 240 157 7 214 435 220 455 5.66e-15 77.4
MS.gene065246.t1 AT1G05560 26.446 242 157 7 222 448 206 441 6.05e-15 77.4
MS.gene065246.t1 AT4G14090 26.923 234 155 8 223 448 220 445 1.27e-14 76.3
MS.gene065246.t1 AT5G05900 23.391 466 301 21 1 436 1 440 6.97e-14 73.9
MS.gene065246.t1 AT1G78270 28.495 186 120 6 253 436 283 457 1.00e-13 73.6
MS.gene065246.t1 AT1G22380 22.199 473 296 18 8 436 13 457 1.83e-13 72.8
MS.gene065246.t1 AT1G22340 21.987 473 298 20 8 436 13 458 3.72e-13 71.6
MS.gene065246.t1 AT3G46720 22.529 435 292 15 8 428 9 412 5.73e-13 70.9
MS.gene065246.t1 AT3G02100 30.899 178 102 6 257 432 277 435 9.65e-13 70.5
MS.gene065246.t1 AT5G17030 25.751 233 153 8 210 436 215 433 1.62e-12 69.7
MS.gene065246.t1 AT5G17040 26.111 180 120 5 257 436 251 417 2.50e-11 65.9
MS.gene065246.t1 AT5G17040 26.111 180 120 5 257 436 149 315 5.44e-11 64.3

Find 88 sgRNAs with CRISPR-Local

Find 104 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTAAACCTGTTCTGCTTTC+AGG 0.094372 2.1:+17769117 MS.gene065246:CDS
ATCACAGTTCCTCATGTTAA+TGG 0.256113 2.1:+17768607 MS.gene065246:CDS
CCAAGGTAAGCTGATGATAT+TGG 0.272835 2.1:-17768835 None:intergenic
AAAGTCTTCAATACTTGATA+TGG 0.289217 2.1:+17768809 MS.gene065246:CDS
ACCCTTTCATTGAACCCTTC+TGG 0.299693 2.1:-17769363 None:intergenic
AGGAACTGTGATAGGGAAAA+AGG 0.317464 2.1:-17768596 None:intergenic
TCGACCAGGAAAATAGAATT+TGG 0.319466 2.1:+17768976 MS.gene065246:CDS
ATTAGAACAAAATCAATTTC+AGG 0.343025 2.1:+17769251 MS.gene065246:CDS
TTACTTGGTCTTGAATTAAC+AGG 0.344148 2.1:+17769279 MS.gene065246:CDS
TTAACATGAGGAACTGTGAT+AGG 0.364501 2.1:-17768604 None:intergenic
ATAAGAGGGAACAAAGAAAA+TGG 0.368045 2.1:-17768664 None:intergenic
TTCTCCTCTAAAGTAGCTTT+CGG 0.371240 2.1:-17769159 None:intergenic
CAATTTCAGGAGTTGTTACT+TGG 0.377973 2.1:+17769264 MS.gene065246:CDS
GCAGCACTTAAGCCACCTAT+TGG 0.380205 2.1:+17769315 MS.gene065246:CDS
AACGGAAAAGGGATTGTATA+TGG 0.383664 2.1:+17769387 MS.gene065246:CDS
GGCTTAAGTGCTGCAAGAAA+TGG 0.387827 2.1:-17769306 None:intergenic
CCCTCTTATTGCTACGGCCA+TGG 0.389322 2.1:+17768678 MS.gene065246:CDS
GAAATGGTTAACATGGCTTA+AGG 0.394243 2.1:+17769179 MS.gene065246:CDS
ACCTCTTAATGCTAACTTGT+TGG 0.399917 2.1:-17768497 None:intergenic
TCAATTGACTCAAATCCAAT+AGG 0.400322 2.1:-17769330 None:intergenic
AAGGGATTGTATATGGAAGT+TGG 0.412108 2.1:+17769394 MS.gene065246:CDS
TTCATGTGAATGAAACTTGA+TGG 0.413535 2.1:-17768938 None:intergenic
TGAAACTTGATGGATGAATC+AGG 0.414033 2.1:-17768928 None:intergenic
AATGAAAGGGTTAACGGAAA+AGG 0.417475 2.1:+17769375 MS.gene065246:CDS
ATTCTAGAACATCCTTCTGT+TGG 0.422732 2.1:+17769432 MS.gene065246:CDS
AAATCAAAGAAAACTATTTG+TGG 0.424765 2.1:-17768745 None:intergenic
AAAGGTTGCAGAGAAATTGA+TGG 0.427334 2.1:+17769063 MS.gene065246:CDS
AAGCTACTTTAGAGGAGAAA+TGG 0.428441 2.1:+17769163 MS.gene065246:CDS
ATGAAAGGGTTAACGGAAAA+GGG 0.428445 2.1:+17769376 MS.gene065246:CDS
GTTGAGAAAGGTGCTGAAGA+TGG 0.431571 2.1:+17769597 MS.gene065246:CDS
TCCAACAAGTTAGCATTAAG+AGG 0.432689 2.1:+17768496 MS.gene065246:CDS
AAATGGTTAACATGGCTTAA+GGG 0.439679 2.1:+17769180 MS.gene065246:CDS
AGAGGACCTGAAAGCAGAAC+AGG 0.445486 2.1:-17769123 None:intergenic
ATGGATGATGAGAATGAGAT+TGG 0.447685 2.1:+17769663 MS.gene065246:CDS
TTGTTTATCTGTTTGATCCA+TGG 0.450820 2.1:-17768695 None:intergenic
CTTTAGTTAAATATGTTCCT+TGG 0.452093 2.1:-17768876 None:intergenic
AATGTTTCCATGGTTTGCTA+TGG 0.456397 2.1:+17768447 MS.gene065246:CDS
ACCAGAAGGGTTCAATGAAA+GGG 0.459081 2.1:+17769362 MS.gene065246:CDS
GGCACCGAAAGCTACTTTAG+AGG 0.459571 2.1:+17769155 MS.gene065246:CDS
AGTGATGAGTACAAAGTTGA+AGG 0.465574 2.1:+17769563 MS.gene065246:CDS
TTTGTTCCCTCTTATTGCTA+CGG 0.466544 2.1:+17768672 MS.gene065246:CDS
CTGGTGTTGTTGCCACGTCT+TGG 0.470989 2.1:+17769516 MS.gene065246:CDS
GGGTTCAATGAAAGGGTTAA+CGG 0.473318 2.1:+17769369 MS.gene065246:CDS
TACCAGAAGGGTTCAATGAA+AGG 0.478236 2.1:+17769361 MS.gene065246:CDS
AAAGTAGCTTTCGGTGCCTC+AGG 0.479624 2.1:-17769150 None:intergenic
TTGAAGAAGCTTTACCAGAA+GGG 0.482277 2.1:+17769349 MS.gene065246:CDS
TCCATGGCCGTAGCAATAAG+AGG 0.485550 2.1:-17768679 None:intergenic
TTGTATGACCGCGTTGACAT+AGG 0.493864 2.1:+17769012 MS.gene065246:CDS
ATGATTCTAAATTGTTGCTA+AGG 0.495803 2.1:-17769728 None:intergenic
ATTCTAAATTGTTGCTAAGG+AGG 0.503967 2.1:-17769725 None:intergenic
ATGTTTCCATGGTTTGCTAT+GGG 0.504571 2.1:+17768448 MS.gene065246:CDS
TGCACATAGCAATGTTTCCA+TGG 0.504753 2.1:+17768437 MS.gene065246:CDS
TAAGATTTGGATGAAGATTG+AGG 0.512250 2.1:-17768570 None:intergenic
TCAGATGCAGTTGCTTTCAA+AGG 0.512600 2.1:+17769045 MS.gene065246:CDS
TTGTTGGAGAAGTGAAGATA+TGG 0.515979 2.1:-17768481 None:intergenic
TTCGGTGCCTCAGGTAATAG+AGG 0.520927 2.1:-17769141 None:intergenic
CCAATATCATCAGCTTACCT+TGG 0.525225 2.1:+17768835 MS.gene065246:CDS
TTGAGAAAGGTGCTGAAGAT+GGG 0.525986 2.1:+17769598 MS.gene065246:CDS
GTTGGTATAGAAGTTGAGAA+AGG 0.534215 2.1:+17769585 MS.gene065246:CDS
ATGAGTACAAAGTTGAAGGT+TGG 0.534783 2.1:+17769567 MS.gene065246:CDS
GATGAATCAGGGAACCCAGC+AGG 0.547907 2.1:-17768916 None:intergenic
TTCGCTTCTTAGCTTCGACC+AGG 0.551610 2.1:+17768962 MS.gene065246:CDS
ATTGAAGAAGCTTTACCAGA+AGG 0.553775 2.1:+17769348 MS.gene065246:CDS
TGGAGCTGCTTCTATTACTG+AGG 0.555465 2.1:+17769473 MS.gene065246:CDS
TAACATGAGGAACTGTGATA+GGG 0.557835 2.1:-17768603 None:intergenic
TAGAGGAGAAATGGTTAACA+TGG 0.564341 2.1:+17769172 MS.gene065246:CDS
ACTTGTTAACACGTGTCAGC+TGG 0.567449 2.1:+17769497 MS.gene065246:CDS
GGGATTCAAACATGGTTCTG+TGG 0.569145 2.1:+17769200 MS.gene065246:CDS
ATTGCTATGTGCAAAGGTGA+AGG 0.578682 2.1:-17768427 None:intergenic
TCTTGCATTCATGATATGAT+CGG 0.585265 2.1:-17769541 None:intergenic
TTCAGGTCCTCTATTACCTG+AGG 0.585305 2.1:+17769134 MS.gene065246:CDS
CAAAGCTGTGAAAATTGTGA+TGG 0.587557 2.1:+17769644 MS.gene065246:CDS
GAAACTTGATGGATGAATCA+GGG 0.588417 2.1:-17768927 None:intergenic
TGGCTTAAGGGATTCAAACA+TGG 0.589723 2.1:+17769192 MS.gene065246:CDS
TAGTTTCAGCATCATGAGGA+AGG 0.594193 2.1:-17768630 None:intergenic
ATTGACTCAAATCCAATAGG+TGG 0.595901 2.1:-17769327 None:intergenic
GGAGCTGCTTCTATTACTGA+GGG 0.605900 2.1:+17769474 MS.gene065246:CDS
GTAATGAAACATCCAACAGA+AGG 0.629473 2.1:-17769444 None:intergenic
CCATGGCCGTAGCAATAAGA+GGG 0.636454 2.1:-17768678 None:intergenic
AGGAAAATAGAATTTGGCAG+TGG 0.637851 2.1:+17768982 MS.gene065246:CDS
AAGTGTCCCATAGCAAACCA+TGG 0.639716 2.1:-17768454 None:intergenic
GAATCAGGGAACCCAGCAGG+TGG 0.657090 2.1:-17768913 None:intergenic
GGAAACATTGCTATGTGCAA+AGG 0.662429 2.1:-17768433 None:intergenic
GAAGTAGTTTCAGCATCATG+AGG 0.663497 2.1:-17768634 None:intergenic
TGAGGAAGGCCATTAACATG+AGG 0.680750 2.1:-17768616 None:intergenic
ATATGATCGGAACCAAGACG+TGG 0.688479 2.1:-17769528 None:intergenic
GGATGTTTCATTACACACTG+TGG 0.709910 2.1:+17769453 MS.gene065246:CDS
ACTTTGTGCCTATGTCAACG+CGG 0.796524 2.1:-17769020 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTCTTTGATTTTCAATAT+TGG + chr2.1:17768755-17768774 MS.gene065246:CDS 15.0%
!! AAATCAAAGAAAACTATTTG+TGG - chr2.1:17768748-17768767 None:intergenic 20.0%
!! ATTAGAACAAAATCAATTTC+AGG + chr2.1:17769251-17769270 MS.gene065246:CDS 20.0%
!!! TGAAATTGATTTTGTTCTAA+TGG - chr2.1:17769252-17769271 None:intergenic 20.0%
! AAAGTCTTCAATACTTGATA+TGG + chr2.1:17768809-17768828 MS.gene065246:CDS 25.0%
! ATGATTCTAAATTGTTGCTA+AGG - chr2.1:17769731-17769750 None:intergenic 25.0%
! CTTTAGTTAAATATGTTCCT+TGG - chr2.1:17768879-17768898 None:intergenic 25.0%
!! ACAAATTGAACTTCTTTTGA+AGG + chr2.1:17768714-17768733 MS.gene065246:CDS 25.0%
!! GATTATCTTCAAACTGTTTT+TGG + chr2.1:17769096-17769115 MS.gene065246:CDS 25.0%
!! TTTTTCTTGGTATATTTCCA+AGG - chr2.1:17768855-17768874 None:intergenic 25.0%
!!! AACTTGTTGAGTGTATTTTT+AGG - chr2.1:17768544-17768563 None:intergenic 25.0%
AAATGGTTAACATGGCTTAA+GGG + chr2.1:17769180-17769199 MS.gene065246:CDS 30.0%
AATATACCAAGAAAAAGCCA+AGG + chr2.1:17768859-17768878 MS.gene065246:CDS 30.0%
ATAAGAGGGAACAAAGAAAA+TGG - chr2.1:17768667-17768686 None:intergenic 30.0%
ATTCTAAATTGTTGCTAAGG+AGG - chr2.1:17769728-17769747 None:intergenic 30.0%
GGGAAAAAGGTAATAAGATT+TGG - chr2.1:17768586-17768605 None:intergenic 30.0%
TAAGATTTGGATGAAGATTG+AGG - chr2.1:17768573-17768592 None:intergenic 30.0%
TCTTGCATTCATGATATGAT+CGG - chr2.1:17769544-17769563 None:intergenic 30.0%
TTCATGTGAATGAAACTTGA+TGG - chr2.1:17768941-17768960 None:intergenic 30.0%
TTGTTTATCTGTTTGATCCA+TGG - chr2.1:17768698-17768717 None:intergenic 30.0%
! TCAATTGACTCAAATCCAAT+AGG - chr2.1:17769333-17769352 None:intergenic 30.0%
!! TTACTTGGTCTTGAATTAAC+AGG + chr2.1:17769279-17769298 MS.gene065246:CDS 30.0%
AAAGGTTGCAGAGAAATTGA+TGG + chr2.1:17769063-17769082 MS.gene065246:CDS 35.0%
AACGGAAAAGGGATTGTATA+TGG + chr2.1:17769387-17769406 MS.gene065246:CDS 35.0%
AAGGGATTGTATATGGAAGT+TGG + chr2.1:17769394-17769413 MS.gene065246:CDS 35.0%
AATGAAAGGGTTAACGGAAA+AGG + chr2.1:17769375-17769394 MS.gene065246:CDS 35.0%
AGGAAAATAGAATTTGGCAG+TGG + chr2.1:17768982-17769001 MS.gene065246:CDS 35.0%
AGTGATGAGTACAAAGTTGA+AGG + chr2.1:17769563-17769582 MS.gene065246:CDS 35.0%
ATCACAGTTCCTCATGTTAA+TGG + chr2.1:17768607-17768626 MS.gene065246:CDS 35.0%
ATGAAAGGGTTAACGGAAAA+GGG + chr2.1:17769376-17769395 MS.gene065246:CDS 35.0%
ATGAGTACAAAGTTGAAGGT+TGG + chr2.1:17769567-17769586 MS.gene065246:CDS 35.0%
ATGGATGATGAGAATGAGAT+TGG + chr2.1:17769663-17769682 MS.gene065246:CDS 35.0%
ATTGAAGAAGCTTTACCAGA+AGG + chr2.1:17769348-17769367 MS.gene065246:CDS 35.0%
CAAAGCTGTGAAAATTGTGA+TGG + chr2.1:17769644-17769663 MS.gene065246:CDS 35.0%
CAATTTCAGGAGTTGTTACT+TGG + chr2.1:17769264-17769283 MS.gene065246:CDS 35.0%
CCAAACTTGACTCAAAAACT+TGG + chr2.1:17768781-17768800 MS.gene065246:CDS 35.0%
GAAATGGTTAACATGGCTTA+AGG + chr2.1:17769179-17769198 MS.gene065246:CDS 35.0%
GTAATGAAACATCCAACAGA+AGG - chr2.1:17769447-17769466 None:intergenic 35.0%
GTTGGTATAGAAGTTGAGAA+AGG + chr2.1:17769585-17769604 MS.gene065246:CDS 35.0%
TAACATGAGGAACTGTGATA+GGG - chr2.1:17768606-17768625 None:intergenic 35.0%
TAGAGGAGAAATGGTTAACA+TGG + chr2.1:17769172-17769191 MS.gene065246:CDS 35.0%
TCCAACAAGTTAGCATTAAG+AGG + chr2.1:17768496-17768515 MS.gene065246:CDS 35.0%
TCGACCAGGAAAATAGAATT+TGG + chr2.1:17768976-17768995 MS.gene065246:CDS 35.0%
TTAACATGAGGAACTGTGAT+AGG - chr2.1:17768607-17768626 None:intergenic 35.0%
TTGAAGAAGCTTTACCAGAA+GGG + chr2.1:17769349-17769368 MS.gene065246:CDS 35.0%
TTGTTGGAGAAGTGAAGATA+TGG - chr2.1:17768484-17768503 None:intergenic 35.0%
TTTGTTCCCTCTTATTGCTA+CGG + chr2.1:17768672-17768691 MS.gene065246:CDS 35.0%
! AAGCTACTTTAGAGGAGAAA+TGG + chr2.1:17769163-17769182 MS.gene065246:CDS 35.0%
! ACCTCTTAATGCTAACTTGT+TGG - chr2.1:17768500-17768519 None:intergenic 35.0%
! ACTGCCAAATTCTATTTTCC+TGG - chr2.1:17768983-17769002 None:intergenic 35.0%
! ATTGACTCAAATCCAATAGG+TGG - chr2.1:17769330-17769349 None:intergenic 35.0%
! GAAACTTGATGGATGAATCA+GGG - chr2.1:17768930-17768949 None:intergenic 35.0%
! TGAAACTTGATGGATGAATC+AGG - chr2.1:17768931-17768950 None:intergenic 35.0%
!! AATGTTTCCATGGTTTGCTA+TGG + chr2.1:17768447-17768466 MS.gene065246:CDS 35.0%
!! ATGTTTCCATGGTTTGCTAT+GGG + chr2.1:17768448-17768467 MS.gene065246:CDS 35.0%
!! ATTCTAGAACATCCTTCTGT+TGG + chr2.1:17769432-17769451 MS.gene065246:CDS 35.0%
!! TATGTTCCTTGGCTTTTTCT+TGG - chr2.1:17768868-17768887 None:intergenic 35.0%
!! TTCTCCTCTAAAGTAGCTTT+CGG - chr2.1:17769162-17769181 None:intergenic 35.0%
!!! CCAAGTTTTTGAGTCAAGTT+TGG - chr2.1:17768784-17768803 None:intergenic 35.0%
ACCAGAAGGGTTCAATGAAA+GGG + chr2.1:17769362-17769381 MS.gene065246:CDS 40.0%
AGGAACTGTGATAGGGAAAA+AGG - chr2.1:17768599-17768618 None:intergenic 40.0%
ATCTCAAAAAACCACCTGCT+GGG + chr2.1:17768902-17768921 MS.gene065246:CDS 40.0%
ATTGCTATGTGCAAAGGTGA+AGG - chr2.1:17768430-17768449 None:intergenic 40.0%
CCAAGGTAAGCTGATGATAT+TGG - chr2.1:17768838-17768857 None:intergenic 40.0%
CCAATATCATCAGCTTACCT+TGG + chr2.1:17768835-17768854 MS.gene065246:CDS 40.0%
GAAGTAGTTTCAGCATCATG+AGG - chr2.1:17768637-17768656 None:intergenic 40.0%
GGAAACATTGCTATGTGCAA+AGG - chr2.1:17768436-17768455 None:intergenic 40.0%
GGATGTTTCATTACACACTG+TGG + chr2.1:17769453-17769472 MS.gene065246:CDS 40.0%
GGGTTCAATGAAAGGGTTAA+CGG + chr2.1:17769369-17769388 MS.gene065246:CDS 40.0%
TACCAGAAGGGTTCAATGAA+AGG + chr2.1:17769361-17769380 MS.gene065246:CDS 40.0%
TAGTTTCAGCATCATGAGGA+AGG - chr2.1:17768633-17768652 None:intergenic 40.0%
TGCACATAGCAATGTTTCCA+TGG + chr2.1:17768437-17768456 MS.gene065246:CDS 40.0%
TGGCTTAAGGGATTCAAACA+TGG + chr2.1:17769192-17769211 MS.gene065246:CDS 40.0%
! TCAGATGCAGTTGCTTTCAA+AGG + chr2.1:17769045-17769064 MS.gene065246:CDS 40.0%
! TTTTGTGCGTATGGAAGTGA+AGG + chr2.1:17769225-17769244 MS.gene065246:CDS 40.0%
!! TTGAGAAAGGTGCTGAAGAT+GGG + chr2.1:17769598-17769617 MS.gene065246:CDS 40.0%
!!! TCTGTGGTTTTTTGTGCGTA+TGG + chr2.1:17769216-17769235 MS.gene065246:CDS 40.0%
AAGTGTCCCATAGCAAACCA+TGG - chr2.1:17768457-17768476 None:intergenic 45.0%
ACCCTTTCATTGAACCCTTC+TGG - chr2.1:17769366-17769385 None:intergenic 45.0%
ACTTTGTGCCTATGTCAACG+CGG - chr2.1:17769023-17769042 None:intergenic 45.0%
ATATGATCGGAACCAAGACG+TGG - chr2.1:17769531-17769550 None:intergenic 45.0%
GATCTCAAAAAACCACCTGC+TGG + chr2.1:17768901-17768920 MS.gene065246:CDS 45.0%
GGAGCTGCTTCTATTACTGA+GGG + chr2.1:17769474-17769493 MS.gene065246:CDS 45.0%
GGTAAACCTGTTCTGCTTTC+AGG + chr2.1:17769117-17769136 MS.gene065246:CDS 45.0%
TGAGGAAGGCCATTAACATG+AGG - chr2.1:17768619-17768638 None:intergenic 45.0%
TGGAGCTGCTTCTATTACTG+AGG + chr2.1:17769473-17769492 MS.gene065246:CDS 45.0%
TTCAGGTCCTCTATTACCTG+AGG + chr2.1:17769134-17769153 MS.gene065246:CDS 45.0%
! ACTTGTTAACACGTGTCAGC+TGG + chr2.1:17769497-17769516 MS.gene065246:CDS 45.0%
! GGCTTAAGTGCTGCAAGAAA+TGG - chr2.1:17769309-17769328 None:intergenic 45.0%
! GGGATTCAAACATGGTTCTG+TGG + chr2.1:17769200-17769219 MS.gene065246:CDS 45.0%
! TTGTATGACCGCGTTGACAT+AGG + chr2.1:17769012-17769031 MS.gene065246:CDS 45.0%
!! GTTGAGAAAGGTGCTGAAGA+TGG + chr2.1:17769597-17769616 MS.gene065246:CDS 45.0%
AGAGGACCTGAAAGCAGAAC+AGG - chr2.1:17769126-17769145 None:intergenic 50.0%
CCATGGCCGTAGCAATAAGA+GGG - chr2.1:17768681-17768700 None:intergenic 50.0%
GCAGCACTTAAGCCACCTAT+TGG + chr2.1:17769315-17769334 MS.gene065246:CDS 50.0%
TCCATGGCCGTAGCAATAAG+AGG - chr2.1:17768682-17768701 None:intergenic 50.0%
TTCGCTTCTTAGCTTCGACC+AGG + chr2.1:17768962-17768981 MS.gene065246:CDS 50.0%
! GGCACCGAAAGCTACTTTAG+AGG + chr2.1:17769155-17769174 MS.gene065246:CDS 50.0%
!! AAAGTAGCTTTCGGTGCCTC+AGG - chr2.1:17769153-17769172 None:intergenic 50.0%
!! TTCGGTGCCTCAGGTAATAG+AGG - chr2.1:17769144-17769163 None:intergenic 50.0%
CCCTCTTATTGCTACGGCCA+TGG + chr2.1:17768678-17768697 MS.gene065246:CDS 55.0%
GATGAATCAGGGAACCCAGC+AGG - chr2.1:17768919-17768938 None:intergenic 55.0%
!! CTGGTGTTGTTGCCACGTCT+TGG + chr2.1:17769516-17769535 MS.gene065246:CDS 55.0%
GAATCAGGGAACCCAGCAGG+TGG - chr2.1:17768916-17768935 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 17768418 17769794 17768418 ID=MS.gene065246
chr2.1 mRNA 17768418 17769794 17768418 ID=MS.gene065246.t1;Parent=MS.gene065246
chr2.1 exon 17768418 17769794 17768418 ID=MS.gene065246.t1.exon1;Parent=MS.gene065246.t1
chr2.1 CDS 17768418 17769794 17768418 ID=cds.MS.gene065246.t1;Parent=MS.gene065246.t1
Gene Sequence

>MS.gene065246

ATGGATGCTCCTTCACCTTTGCACATAGCAATGTTTCCATGGTTTGCTATGGGACACTTGACACCATATCTTCACTTCTCCAACAAGTTAGCATTAAGAGGTCACAAAATCTCATTCTTCATACCTAAAAATACACTCAACAAGTTACAACACCTCAATCTTCATCCAAATCTTATTACCTTTTTCCCTATCACAGTTCCTCATGTTAATGGCCTTCCTCATGATGCTGAAACTACTTCAGATGTACCATTTTCTTTGTTCCCTCTTATTGCTACGGCCATGGATCAAACAGATAAACAAATTGAACTTCTTTTGAAGGAGTTAAAGCCACAAATAGTTTTCTTTGATTTTCAATATTGGCTACCAAACTTGACTCAAAAACTTGGTATCAAAAGTCTTCAATACTTGATATGGAATCCAATATCATCAGCTTACCTTGGAAATATACCAAGAAAAAGCCAAGGAACATATTTAACTAAAGATGATCTCAAAAAACCACCTGCTGGGTTCCCTGATTCATCCATCAAGTTTCATTCACATGAACTTCGCTTCTTAGCTTCGACCAGGAAAATAGAATTTGGCAGTGGTGTTTTATTGTATGACCGCGTTGACATAGGCACAAAGTTTTCAGATGCAGTTGCTTTCAAAGGTTGCAGAGAAATTGATGGTTTATATGCTGATTATCTTCAAACTGTTTTTGGTAAACCTGTTCTGCTTTCAGGTCCTCTATTACCTGAGGCACCGAAAGCTACTTTAGAGGAGAAATGGTTAACATGGCTTAAGGGATTCAAACATGGTTCTGTGGTTTTTTGTGCGTATGGAAGTGAAGGTCCATTAGAACAAAATCAATTTCAGGAGTTGTTACTTGGTCTTGAATTAACAGGTTTTCCATTTCTTGCAGCACTTAAGCCACCTATTGGATTTGAGTCAATTGAAGAAGCTTTACCAGAAGGGTTCAATGAAAGGGTTAACGGAAAAGGGATTGTATATGGAAGTTGGATTCAACAACAGTTGATTCTAGAACATCCTTCTGTTGGATGTTTCATTACACACTGTGGAGCTGCTTCTATTACTGAGGGACTTGTTAACACGTGTCAGCTGGTGTTGTTGCCACGTCTTGGTTCCGATCATATCATGAATGCAAGAGTGATGAGTACAAAGTTGAAGGTTGGTATAGAAGTTGAGAAAGGTGCTGAAGATGGGTTGTTTACAAAAGAAAGTGTGTGCAAAGCTGTGAAAATTGTGATGGATGATGAGAATGAGATTGGAAGAGAAGTGAGAGCAAATCATGCAAAAATGAGAAACTTCCTCCTTAGCAACAATTTAGAATCATCATGTGTTGATAGTTTCTGTCAGAAACTTTATGATTTGCTCTAG

Protein sequence

>MS.gene065246.t1

MDAPSPLHIAMFPWFAMGHLTPYLHFSNKLALRGHKISFFIPKNTLNKLQHLNLHPNLITFFPITVPHVNGLPHDAETTSDVPFSLFPLIATAMDQTDKQIELLLKELKPQIVFFDFQYWLPNLTQKLGIKSLQYLIWNPISSAYLGNIPRKSQGTYLTKDDLKKPPAGFPDSSIKFHSHELRFLASTRKIEFGSGVLLYDRVDIGTKFSDAVAFKGCREIDGLYADYLQTVFGKPVLLSGPLLPEAPKATLEEKWLTWLKGFKHGSVVFCAYGSEGPLEQNQFQELLLGLELTGFPFLAALKPPIGFESIEEALPEGFNERVNGKGIVYGSWIQQQLILEHPSVGCFITHCGAASITEGLVNTCQLVLLPRLGSDHIMNARVMSTKLKVGIEVEKGAEDGLFTKESVCKAVKIVMDDENEIGREVRANHAKMRNFLLSNNLESSCVDSFCQKLYDLL