AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene92083


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene92083.t1 MTR_2g083430 96.943 458 14 0 1 458 1 458 0.0 911
MS.gene92083.t1 MTR_2g083480 78.118 457 100 0 1 457 1 457 0.0 723
MS.gene92083.t1 MTR_2g083390 73.144 458 99 1 1 458 1 434 0.0 692
MS.gene92083.t1 MTR_2g083420 73.581 458 97 1 1 458 1 434 0.0 688
MS.gene92083.t1 MTR_2g083380 68.996 458 142 0 1 458 18 475 0.0 639
MS.gene92083.t1 MTR_2g083490 68.559 458 144 0 1 458 1 458 0.0 636
MS.gene92083.t1 MTR_4g079250 59.783 460 181 3 1 458 1 458 0.0 580
MS.gene92083.t1 MTR_4g079270 59.130 460 184 3 1 458 1 458 0.0 573
MS.gene92083.t1 MTR_2g014900 56.319 451 196 1 8 458 7 456 0.0 533
MS.gene92083.t1 MTR_2g083360 59.382 453 79 4 6 458 27 374 3.50e-174 493
MS.gene92083.t1 MTR_2g086283 53.244 447 97 7 11 457 1 335 5.07e-147 423
MS.gene92083.t1 MTR_1g090270 41.126 462 250 11 7 457 14 464 5.22e-112 338
MS.gene92083.t1 MTR_4g059370 40.597 335 180 8 132 457 67 391 1.84e-79 252
MS.gene92083.t1 MTR_8g068330 32.120 467 289 14 7 456 7 462 1.75e-69 228
MS.gene92083.t1 MTR_4g123553 32.770 473 276 16 2 455 9 458 2.42e-68 225
MS.gene92083.t1 MTR_8g068360 32.203 472 285 16 7 458 11 467 2.53e-67 223
MS.gene92083.t1 MTR_7g067330 32.609 460 258 14 7 455 8 426 1.36e-65 217
MS.gene92083.t1 MTR_2g008226 34.526 475 273 19 6 456 8 468 6.37e-65 216
MS.gene92083.t1 MTR_8g068340 31.116 466 293 13 7 455 11 465 1.80e-64 215
MS.gene92083.t1 MTR_7g067120 32.321 461 258 15 7 455 8 426 3.42e-64 213
MS.gene92083.t1 MTR_2g008225 31.602 462 291 13 6 454 13 462 8.15e-63 211
MS.gene92083.t1 MTR_2g014930 42.268 291 86 7 17 306 9 218 1.20e-61 200
MS.gene92083.t1 MTR_2g008220 31.818 462 290 13 6 454 12 461 2.07e-61 207
MS.gene92083.t1 MTR_6g036650 31.303 476 278 16 6 455 16 468 6.65e-60 203
MS.gene92083.t1 MTR_6g042310 31.965 463 283 16 7 455 17 461 4.77e-59 201
MS.gene92083.t1 MTR_2g046620 30.835 467 293 15 2 455 10 459 1.27e-55 192
MS.gene92083.t1 MTR_4g079280 41.667 228 88 2 11 238 1 183 2.10e-54 180
MS.gene92083.t1 MTR_2g083440 82.353 102 18 0 357 458 11 112 2.34e-52 172
MS.gene92083.t1 MTR_8g007650 31.674 442 278 11 7 432 6 439 1.12e-50 179
MS.gene92083.t1 MTR_8g007565 31.448 442 279 11 7 432 6 439 1.34e-50 178
MS.gene92083.t1 MTR_1g090280 43.269 208 106 5 261 457 108 314 3.43e-48 168
MS.gene92083.t1 MTR_5g066410 28.989 445 263 11 11 432 1 415 1.66e-46 167
MS.gene92083.t1 MTR_4g077960 29.806 463 273 18 17 455 1 435 2.64e-46 166
MS.gene92083.t1 MTR_8g071070 28.151 476 305 13 8 457 7 471 3.79e-34 134
MS.gene92083.t1 MTR_8g009055 28.298 470 265 17 7 435 5 443 1.69e-33 132
MS.gene92083.t1 MTR_8g066610 26.195 481 319 14 6 457 7 480 2.01e-33 132
MS.gene92083.t1 MTR_5g087620 25.887 479 298 16 8 443 10 474 1.10e-32 130
MS.gene92083.t1 MTR_8g009050 27.447 470 269 16 7 435 5 443 2.20e-32 129
MS.gene92083.t1 MTR_7g117170 28.233 464 281 17 3 435 10 452 6.16e-32 127
MS.gene92083.t1 MTR_6g033615 28.251 446 264 16 9 428 5 420 4.86e-31 124
MS.gene92083.t1 MTR_8g027885 27.789 493 272 17 4 452 15 467 8.48e-31 124
MS.gene92083.t1 MTR_8g027870 27.586 493 273 16 4 452 15 467 1.00e-30 124
MS.gene92083.t1 MTR_6g023665 26.351 444 297 10 9 433 14 446 1.04e-30 124
MS.gene92083.t1 MTR_7g013220 26.027 438 288 14 8 427 5 424 1.36e-30 123
MS.gene92083.t1 MTR_4g031800 25.761 493 291 16 6 454 7 468 2.50e-30 123
MS.gene92083.t1 MTR_3g435310 37.313 201 119 5 255 455 224 417 4.91e-30 121
MS.gene92083.t1 MTR_3g435310 33.557 149 93 5 6 151 16 161 1.81e-17 84.7
MS.gene92083.t1 MTR_8g008990 27.542 472 268 18 7 435 5 445 9.77e-30 121
MS.gene92083.t1 MTR_8g009073 28.078 463 273 17 7 435 5 441 1.38e-29 120
MS.gene92083.t1 MTR_6g033625 27.253 455 271 17 9 428 5 434 2.53e-29 120
MS.gene92083.t1 MTR_0009s0240 24.464 466 325 15 8 457 7 461 2.84e-29 119
MS.gene92083.t1 MTR_7g070660 24.153 472 311 15 7 444 10 468 3.89e-29 119
MS.gene92083.t1 MTR_4g117980 25.684 475 279 17 6 433 9 456 9.23e-29 118
MS.gene92083.t1 MTR_6g488280 25.901 444 299 11 9 433 7 439 9.94e-29 118
MS.gene92083.t1 MTR_0428s0010 25.901 444 299 11 9 433 7 439 9.94e-29 118
MS.gene92083.t1 MTR_2g098430 23.871 465 299 14 9 437 7 452 1.45e-28 118
MS.gene92083.t1 MTR_7g013200 26.966 445 264 18 8 427 5 413 5.27e-28 115
MS.gene92083.t1 MTR_4g024020 27.097 465 295 18 5 433 6 462 5.42e-28 116
MS.gene92083.t1 MTR_8g009063 26.724 464 279 18 7 436 12 448 7.40e-28 115
MS.gene92083.t1 MTR_7g070740 24.255 470 292 14 7 433 10 458 9.70e-28 115
MS.gene92083.t1 MTR_7g102560 26.327 471 287 15 5 433 6 458 1.61e-27 115
MS.gene92083.t1 MTR_8g006270 26.024 415 238 12 53 434 61 439 1.86e-27 114
MS.gene92083.t1 MTR_1g062380 25.110 454 290 16 4 418 12 454 2.50e-27 114
MS.gene92083.t1 MTR_0184s0040 25.316 474 275 16 7 436 20 458 3.42e-27 114
MS.gene92083.t1 MTR_0078s0190 25.316 474 275 16 7 436 20 458 3.42e-27 114
MS.gene92083.t1 MTR_4g485590 27.494 411 236 14 8 394 9 381 3.68e-27 113
MS.gene92083.t1 MTR_7g013180 26.498 434 272 17 8 419 5 413 4.29e-27 113
MS.gene92083.t1 MTR_8g465670 26.898 461 280 16 9 434 8 446 6.46e-27 113
MS.gene92083.t1 MTR_8g006730 23.767 446 310 11 8 433 6 441 7.94e-27 112
MS.gene92083.t1 MTR_0184s0030 26.350 463 267 14 7 425 5 437 9.66e-27 112
MS.gene92083.t1 MTR_6g033725 28.829 444 277 17 9 429 5 432 1.05e-26 112
MS.gene92083.t1 MTR_0078s0060 25.054 467 284 15 7 436 5 442 1.75e-26 112
MS.gene92083.t1 MTR_5g045970 26.681 476 292 19 3 435 11 472 2.84e-26 111
MS.gene92083.t1 MTR_7g102460 26.004 473 293 20 5 436 6 462 3.01e-26 111
MS.gene92083.t1 MTR_7g055710 24.190 463 301 15 7 433 10 458 3.65e-26 111
MS.gene92083.t1 MTR_8g009073 32.677 254 149 9 198 435 65 312 4.91e-26 108
MS.gene92083.t1 MTR_8g009067 26.998 463 278 16 7 435 5 441 5.65e-26 110
MS.gene92083.t1 MTR_7g102490 27.097 465 294 19 5 433 6 461 6.30e-26 110
MS.gene92083.t1 MTR_8g009067 35.407 209 116 7 241 435 120 323 8.35e-26 108
MS.gene92083.t1 MTR_7g047030 24.520 469 281 16 8 435 6 442 1.88e-25 108
MS.gene92083.t1 MTR_7g047270 24.520 469 281 16 8 435 6 442 1.88e-25 108
MS.gene92083.t1 MTR_6g005600 29.254 335 198 9 124 436 125 442 2.04e-25 108
MS.gene92083.t1 MTR_0078s0010 24.891 458 293 12 8 435 6 442 2.05e-25 108
MS.gene92083.t1 MTR_6g038200 26.562 448 270 18 8 429 11 425 2.18e-25 108
MS.gene92083.t1 MTR_7g070610 24.094 469 295 16 7 433 12 461 2.74e-25 108
MS.gene92083.t1 MTR_5g035580 26.477 457 296 15 7 448 12 443 4.00e-25 107
MS.gene92083.t1 MTR_8g006260 32.877 219 129 8 231 436 234 447 7.73e-25 107
MS.gene92083.t1 MTR_5g035560 26.457 446 286 16 7 436 10 429 9.05e-25 107
MS.gene92083.t1 MTR_7g070800 24.516 465 294 15 7 433 5 450 1.05e-24 107
MS.gene92083.t1 MTR_4g485620 24.153 443 299 12 20 436 1 432 1.09e-24 106
MS.gene92083.t1 MTR_6g038220 26.767 467 276 20 8 448 11 437 1.11e-24 106
MS.gene92083.t1 MTR_8g006220 25.800 469 283 14 9 434 7 453 1.31e-24 106
MS.gene92083.t1 MTR_2g046820 36.364 209 118 6 259 457 259 462 1.45e-24 106
MS.gene92083.t1 MTR_6g038230 27.682 466 274 21 8 448 11 438 1.49e-24 106
MS.gene92083.t1 MTR_8g006710 24.516 465 280 15 9 433 7 440 1.52e-24 106
MS.gene92083.t1 MTR_8g012730 33.484 221 128 5 228 434 69 284 1.55e-24 103
MS.gene92083.t1 MTR_8g012635 34.737 190 106 4 259 434 262 447 1.99e-24 105
MS.gene92083.t1 MTR_8g074550 24.792 480 289 18 6 434 6 464 2.09e-24 106
MS.gene92083.t1 MTR_8g466240 25.882 425 262 17 1 398 1 399 2.82e-24 105
MS.gene92083.t1 MTR_4g128720 26.667 435 280 17 7 425 14 425 2.93e-24 105
MS.gene92083.t1 MTR_1g019520 33.862 189 110 4 258 435 5 189 6.19e-24 99.8
MS.gene92083.t1 MTR_8g083280 24.948 485 297 16 8 448 7 468 1.06e-23 103
MS.gene92083.t1 MTR_7g071040 23.060 464 306 13 7 433 16 465 1.22e-23 103
MS.gene92083.t1 MTR_1g019510 25.764 458 289 16 7 435 5 440 2.17e-23 102
MS.gene92083.t1 MTR_2g034990 26.022 465 290 20 6 438 9 451 2.37e-23 102
MS.gene92083.t1 MTR_7g070810 25.333 450 300 13 7 428 8 449 2.95e-23 102
MS.gene92083.t1 MTR_8g012650 33.684 190 108 4 259 434 262 447 3.13e-23 102
MS.gene92083.t1 MTR_3g009510 34.054 185 106 3 258 429 266 447 3.17e-23 102
MS.gene92083.t1 MTR_7g046490 31.818 242 143 7 209 434 204 439 3.63e-23 102
MS.gene92083.t1 MTR_8g088560 24.440 491 288 20 7 455 9 458 3.81e-23 102
MS.gene92083.t1 MTR_7g117405 25.270 463 296 18 8 436 12 458 5.02e-23 101
MS.gene92083.t1 MTR_6g033660 27.891 441 285 16 9 428 5 433 5.65e-23 101
MS.gene92083.t1 MTR_2g059240 25.172 437 278 13 5 408 10 430 6.40e-23 101
MS.gene92083.t1 MTR_7g071050 24.667 450 269 17 7 433 12 414 7.51e-23 100
MS.gene92083.t1 MTR_4g485630 25.652 460 297 17 7 435 8 453 8.12e-23 101
MS.gene92083.t1 MTR_7g070910 23.226 465 304 14 7 433 10 459 9.29e-23 101
MS.gene92083.t1 MTR_8g012630 33.684 190 108 4 259 434 206 391 1.17e-22 100
MS.gene92083.t1 MTR_2g046750 34.928 209 121 6 259 457 262 465 1.36e-22 100
MS.gene92083.t1 MTR_5g019580 33.180 217 126 6 229 427 258 473 1.91e-22 100
MS.gene92083.t1 MTR_6g033675 25.000 440 302 13 9 429 5 435 2.05e-22 100
MS.gene92083.t1 MTR_5g067170 25.918 463 291 18 6 433 9 454 2.07e-22 100
MS.gene92083.t1 MTR_5g019580 33.180 217 126 6 229 427 234 449 2.16e-22 100
MS.gene92083.t1 MTR_7g013260 25.624 441 273 19 1 420 1 407 2.18e-22 99.8
MS.gene92083.t1 MTR_6g035185 22.912 467 303 15 6 433 9 457 2.41e-22 99.8
MS.gene92083.t1 MTR_7g070930 23.391 466 302 15 7 433 13 462 2.53e-22 99.8
MS.gene92083.t1 MTR_7g070940 21.992 482 331 14 7 457 8 475 3.19e-22 99.4
MS.gene92083.t1 MTR_2g040530 33.684 190 114 4 259 438 261 448 3.26e-22 99.4
MS.gene92083.t1 MTR_0536s0010 25.708 459 290 17 6 436 19 454 3.85e-22 99.4
MS.gene92083.t1 MTR_4g117950 25.217 460 290 17 6 435 4 439 4.49e-22 99.0
MS.gene92083.t1 MTR_6g035265 24.026 462 295 15 6 433 9 448 4.80e-22 99.0
MS.gene92083.t1 MTR_0536s0020 24.948 477 282 17 2 436 12 454 4.93e-22 99.0
MS.gene92083.t1 MTR_7g070780 22.930 471 299 13 6 433 9 458 5.44e-22 99.0
MS.gene92083.t1 MTR_6g038240 33.333 171 103 6 259 429 266 425 5.72e-22 98.6
MS.gene92083.t1 MTR_1g107315 26.207 435 279 12 1 408 1 420 6.49e-22 98.6
MS.gene92083.t1 MTR_1g107350 25.000 472 290 20 1 435 1 445 6.75e-22 98.6
MS.gene92083.t1 MTR_4g117890 25.100 498 303 19 2 455 7 478 7.01e-22 98.6
MS.gene92083.t1 MTR_8g008970 33.014 209 121 7 241 435 238 441 1.02e-21 99.0
MS.gene92083.t1 MTR_8g008970 32.961 179 108 5 258 436 597 763 6.40e-17 84.0
MS.gene92083.t1 MTR_8g077590 30.705 241 148 6 208 434 207 442 1.09e-21 97.8
MS.gene92083.t1 MTR_4g082820 27.438 441 275 17 7 419 6 429 1.71e-21 97.1
MS.gene92083.t1 MTR_5g045960 24.520 469 295 18 7 433 8 459 2.73e-21 96.7
MS.gene92083.t1 MTR_3g049970 26.539 471 285 18 1 435 1 446 4.17e-21 95.9
MS.gene92083.t1 MTR_7g102550 25.490 459 293 18 8 429 9 455 4.59e-21 95.9
MS.gene92083.t1 MTR_5g029800 24.034 466 295 19 6 428 9 458 1.56e-20 94.4
MS.gene92083.t1 MTR_4g117960 23.974 463 301 16 6 433 9 455 1.57e-20 94.4
MS.gene92083.t1 MTR_5g098960 38.596 171 88 7 259 426 262 418 2.38e-20 93.6
MS.gene92083.t1 MTR_3g479520 24.536 485 300 20 8 450 15 475 2.98e-20 93.6
MS.gene92083.t1 MTR_4g128690 26.450 431 270 17 7 419 14 415 4.32e-20 92.8
MS.gene92083.t1 MTR_5g090610 29.845 258 153 9 206 438 190 444 4.84e-20 92.8
MS.gene92083.t1 MTR_7g013240 25.000 424 284 15 8 420 6 406 5.61e-20 92.4
MS.gene92083.t1 MTR_3g079480 24.187 492 309 18 8 458 21 489 6.58e-20 92.4
MS.gene92083.t1 MTR_8g064880 25.408 429 257 16 6 394 7 412 9.75e-20 92.0
MS.gene92083.t1 MTR_7g070860 22.894 463 290 14 7 433 6 437 1.27e-19 91.7
MS.gene92083.t1 MTR_3g084530 24.348 460 288 18 8 429 6 443 1.39e-19 91.3
MS.gene92083.t1 MTR_5g090700 28.077 260 155 8 206 438 206 460 2.28e-19 90.9
MS.gene92083.t1 MTR_3g479490 24.197 467 295 19 7 435 5 450 2.29e-19 90.9
MS.gene92083.t1 MTR_4g082810 27.340 406 251 13 7 384 6 395 2.31e-19 90.1
MS.gene92083.t1 MTR_8g083290 33.721 172 107 5 259 429 269 434 2.41e-19 90.5
MS.gene92083.t1 MTR_2g035020 23.947 451 296 15 6 422 9 446 2.54e-19 90.9
MS.gene92083.t1 MTR_3g069690 31.892 185 115 6 253 435 251 426 3.27e-19 90.1
MS.gene92083.t1 MTR_5g098930 26.087 253 156 6 231 454 217 467 3.58e-19 90.1
MS.gene92083.t1 MTR_5g090620 25.954 262 160 6 206 438 203 459 3.99e-19 90.1
MS.gene92083.t1 MTR_3g084540 24.375 480 303 19 8 449 6 463 4.49e-19 89.7
MS.gene92083.t1 MTR_4g485640 23.502 434 295 13 18 427 219 639 4.86e-19 90.5
MS.gene92083.t1 MTR_5g090660 29.204 226 137 7 234 438 233 456 6.05e-19 89.7
MS.gene92083.t1 MTR_4g094920 28.218 202 136 6 259 454 281 479 6.64e-19 89.4
MS.gene92083.t1 MTR_8g012745 31.604 212 123 7 239 434 239 444 6.76e-19 89.4
MS.gene92083.t1 MTR_6g011340 24.512 461 301 16 8 435 10 456 7.56e-19 89.4
MS.gene92083.t1 MTR_8g044140 22.488 418 248 13 46 416 19 407 9.69e-19 89.0
MS.gene92083.t1 MTR_1g032490 25.688 436 268 13 7 408 9 422 1.00e-18 89.0
MS.gene92083.t1 MTR_5g090630 29.224 219 132 6 241 438 233 449 1.08e-18 88.6
MS.gene92083.t1 MTR_7g470610 27.653 311 174 11 120 409 5 285 1.47e-18 86.3
MS.gene92083.t1 MTR_7g070583 27.653 311 174 11 120 409 5 285 1.47e-18 86.3
MS.gene92083.t1 MTR_3g009490 34.568 162 88 4 282 429 2 159 1.61e-18 84.0
MS.gene92083.t1 MTR_5g075440 24.313 473 287 16 1 439 1 436 1.69e-18 88.2
MS.gene92083.t1 MTR_6g038300 31.579 171 107 5 259 429 266 426 1.72e-18 88.2
MS.gene92083.t1 MTR_8g064870 24.026 462 299 15 6 435 9 450 2.03e-18 87.8
MS.gene92083.t1 MTR_3g069710 33.155 187 113 6 251 435 252 428 2.59e-18 87.4
MS.gene92083.t1 MTR_2g035040 31.053 190 115 5 258 433 174 361 3.86e-18 86.3
MS.gene92083.t1 MTR_3g084520 23.176 466 286 17 8 429 6 443 4.02e-18 87.0
MS.gene92083.t1 MTR_7g102450 33.333 186 108 5 264 436 267 449 4.16e-18 87.0
MS.gene92083.t1 MTR_5g090670 28.054 221 134 6 241 438 242 460 4.52e-18 87.0
MS.gene92083.t1 MTR_7g080940 31.319 182 114 5 253 434 258 428 4.65e-18 86.7
MS.gene92083.t1 MTR_7g080935 24.051 474 308 15 7 458 10 453 6.80e-18 86.3
MS.gene92083.t1 MTR_5g027210 25.101 247 152 4 212 426 212 457 8.26e-18 86.3
MS.gene92083.t1 MTR_1g107360 30.288 208 133 5 229 435 242 438 8.71e-18 85.9
MS.gene92083.t1 MTR_4g095008 29.121 182 120 6 259 436 266 442 1.07e-17 85.9
MS.gene92083.t1 MTR_8g032950 23.241 469 310 18 1 435 5 457 1.16e-17 85.5
MS.gene92083.t1 MTR_4g108250 22.128 470 309 14 7 436 10 462 1.27e-17 85.5
MS.gene92083.t1 MTR_3g479610 30.052 193 125 5 259 450 122 305 2.22e-17 83.2
MS.gene92083.t1 MTR_6g014270 23.226 465 304 17 8 435 7 455 2.28e-17 84.7
MS.gene92083.t1 MTR_0288s0020 25.000 460 281 18 8 435 10 437 3.94e-17 84.0
MS.gene92083.t1 MTR_4g008630 25.311 241 165 6 209 437 204 441 5.38e-17 83.6
MS.gene92083.t1 MTR_5g058320 23.516 455 304 14 5 435 7 441 5.44e-17 83.6
MS.gene92083.t1 MTR_7g080950 31.319 182 114 6 253 434 253 423 5.72e-17 83.2
MS.gene92083.t1 MTR_5g090580 25.769 260 161 7 206 438 204 458 6.27e-17 83.2
MS.gene92083.t1 MTR_8g090095 26.891 238 158 6 215 438 224 459 6.46e-17 83.2
MS.gene92083.t1 MTR_6g013450 23.226 465 308 14 5 429 7 462 7.10e-17 83.2
MS.gene92083.t1 MTR_8g059425 28.000 250 152 10 199 435 220 454 1.04e-16 82.8
MS.gene92083.t1 MTR_7g102520 30.978 184 120 3 259 436 281 463 1.04e-16 82.8
MS.gene92083.t1 MTR_3g031400 22.876 459 271 15 8 434 18 425 1.29e-16 82.4
MS.gene92083.t1 MTR_1g107375 31.633 196 122 5 240 435 247 430 1.77e-16 82.0
MS.gene92083.t1 MTR_0891s0010 28.814 177 117 4 259 435 99 266 1.78e-16 80.1
MS.gene92083.t1 MTR_3g031450 23.841 453 276 19 8 434 18 427 2.02e-16 81.6
MS.gene92083.t1 MTR_4g118000 23.820 466 295 16 1 432 1 440 2.15e-16 81.6
MS.gene92083.t1 MTR_7g012120 29.775 178 110 4 259 422 272 448 2.32e-16 81.6
MS.gene92083.t1 MTR_6g014040 25.216 464 295 17 8 435 10 457 2.52e-16 81.6
MS.gene92083.t1 MTR_6g013900 30.055 183 118 5 253 435 283 455 2.60e-16 81.6
MS.gene92083.t1 MTR_5g070040 31.100 209 123 9 236 428 240 443 5.15e-16 80.5
MS.gene92083.t1 MTR_6g014020 24.026 462 302 16 8 435 10 456 5.25e-16 80.5
MS.gene92083.t1 MTR_6g014170 29.381 194 127 5 253 446 266 449 5.36e-16 80.5
MS.gene92083.t1 MTR_6g013990 26.582 237 150 9 212 435 229 454 9.60e-16 79.7
MS.gene92083.t1 MTR_6g013920 23.644 461 304 14 8 435 10 455 1.44e-15 79.3
MS.gene92083.t1 MTR_7g070870 23.325 403 283 11 7 394 18 409 1.61e-15 79.0
MS.gene92083.t1 MTR_1g107365 31.953 169 104 4 240 408 286 443 1.82e-15 79.0
MS.gene92083.t1 MTR_5g464810 24.190 463 297 20 8 436 12 454 2.01e-15 78.6
MS.gene92083.t1 MTR_5g064240 24.190 463 297 20 8 436 12 454 2.01e-15 78.6
MS.gene92083.t1 MTR_1g029540 20.667 450 302 14 13 437 19 438 2.14e-15 78.6
MS.gene92083.t1 MTR_7g011470 25.330 454 292 15 8 435 10 442 2.28e-15 78.6
MS.gene92083.t1 MTR_1g107380 32.584 178 110 7 259 434 279 448 2.43e-15 78.6
MS.gene92083.t1 MTR_7g011470 25.110 454 289 15 8 435 10 438 2.90e-15 78.2
MS.gene92083.t1 MTR_8g056740 25.112 223 149 5 220 430 121 337 2.91e-15 77.8
MS.gene92083.t1 MTR_5g004940 27.586 203 133 5 242 435 182 379 3.77e-15 77.4
MS.gene92083.t1 MTR_6g014220 24.353 464 296 18 8 435 10 454 4.53e-15 77.8
MS.gene92083.t1 MTR_6g014200 24.946 461 299 17 8 435 7 453 4.68e-15 77.4
MS.gene92083.t1 MTR_1g107285 24.153 472 279 17 6 435 6 440 1.18e-14 76.3
MS.gene92083.t1 MTR_5g072840 22.348 443 300 12 8 434 10 424 1.60e-14 75.9
MS.gene92083.t1 MTR_6g014190 28.866 194 128 5 253 446 91 274 2.70e-14 73.6
MS.gene92083.t1 MTR_5g016480 21.459 466 314 18 1 434 1 446 3.92e-14 74.7
MS.gene92083.t1 MTR_8g007585 28.962 183 120 5 253 435 196 368 4.08e-14 74.3
MS.gene92083.t1 MTR_3g008010 29.213 178 114 6 259 435 288 454 4.14e-14 74.7
MS.gene92083.t1 MTR_6g014310 27.381 252 147 10 201 435 225 457 4.36e-14 74.7
MS.gene92083.t1 MTR_6g014250 27.717 184 123 5 253 436 282 455 4.86e-14 74.3
MS.gene92083.t1 MTR_8g009840 31.875 160 93 3 274 419 333 490 7.80e-14 73.9
MS.gene92083.t1 MTR_6g014050 27.016 248 153 9 201 435 225 457 1.23e-13 73.2
MS.gene92083.t1 MTR_1g040310 21.849 476 292 19 7 433 14 458 1.84e-13 72.8
MS.gene92083.t1 MTR_6g014187 23.210 461 307 17 8 435 10 456 3.97e-13 71.6
MS.gene92083.t1 MTR_6g013960 21.915 470 324 14 8 446 10 467 4.44e-13 71.6
MS.gene92083.t1 MTR_7g080900 27.897 233 144 8 210 429 205 426 6.88e-13 70.9
MS.gene92083.t1 MTR_5g040030 22.343 461 313 17 7 433 13 462 1.39e-12 70.1
MS.gene92083.t1 MTR_6g014240 27.473 182 122 5 253 434 251 422 1.89e-12 69.3
MS.gene92083.t1 MTR_2086s0010 28.025 157 104 4 279 435 1 148 2.12e-12 65.9
MS.gene92083.t1 MTR_1996s0010 28.025 157 104 4 279 435 1 148 2.12e-12 65.9
MS.gene92083.t1 MTR_4g094220 29.050 179 116 6 258 435 287 455 2.41e-12 69.3
MS.gene92083.t1 MTR_7g039550 27.500 200 123 7 259 447 57 245 3.39e-12 67.0
MS.gene92083.t1 MTR_4g064987 24.431 483 289 22 8 458 8 446 5.12e-12 68.2
MS.gene92083.t1 MTR_6g014150 28.022 182 121 5 253 434 281 452 5.80e-12 67.8
MS.gene92083.t1 MTR_4g064987 29.808 208 121 8 258 458 251 440 1.09e-11 67.0
MS.gene92083.t1 MTR_5g031860 29.655 145 96 4 252 395 275 414 1.78e-11 66.2
MS.gene92083.t1 MTR_6g014290 25.683 183 126 5 253 435 282 454 2.58e-11 65.9
MS.gene92083.t1 MTR_0536s0030 30.370 135 82 4 309 433 194 326 8.50e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene92083.t1 AT5G53990 46.608 457 219 9 7 458 5 441 5.46e-145 422
MS.gene92083.t1 AT5G54010 45.022 462 235 7 1 458 1 447 1.08e-143 419
MS.gene92083.t1 AT1G64920 45.197 458 228 8 7 458 5 445 1.07e-140 411
MS.gene92083.t1 AT4G27570 43.074 462 244 7 1 458 1 447 1.86e-140 410
MS.gene92083.t1 AT1G64910 45.374 454 229 7 7 458 5 441 7.07e-140 409
MS.gene92083.t1 AT4G27560 43.074 462 244 7 1 458 1 447 2.20e-139 408
MS.gene92083.t1 AT4G09500 44.592 453 232 8 5 455 3 438 3.60e-139 407
MS.gene92083.t1 AT2G22930 45.395 456 224 8 5 455 3 438 1.08e-138 405
MS.gene92083.t1 AT3G29630 43.167 461 242 6 1 458 1 444 1.87e-137 402
MS.gene92083.t1 AT5G54060 44.565 460 242 8 7 458 12 466 1.20e-134 396
MS.gene92083.t1 AT3G29630 43.013 458 221 7 1 458 1 418 7.03e-133 390
MS.gene92083.t1 AT4G09500 42.794 451 218 8 5 455 3 413 3.30e-129 380
MS.gene92083.t1 AT1G50580 42.576 458 241 7 1 455 1 439 2.01e-128 379
MS.gene92083.t1 AT5G65550 30.704 469 299 15 5 458 6 463 8.13e-65 216
MS.gene92083.t1 AT5G49690 31.486 451 278 15 7 443 9 442 1.33e-62 210
MS.gene92083.t1 AT2G22590 31.828 465 288 15 7 454 14 466 1.46e-62 210
MS.gene92083.t1 AT2G22930 41.441 222 108 5 5 222 3 206 2.38e-51 176
MS.gene92083.t1 AT2G22930 36.458 96 57 2 363 455 192 286 5.33e-13 69.7
MS.gene92083.t1 AT5G03490 26.846 447 285 12 6 435 17 438 8.73e-37 141
MS.gene92083.t1 AT1G51210 28.571 455 265 17 2 433 15 432 4.31e-36 138
MS.gene92083.t1 AT2G15490 26.403 481 316 14 7 456 6 479 6.50e-36 139
MS.gene92083.t1 AT2G15490 26.860 484 313 16 7 456 6 482 6.27e-35 136
MS.gene92083.t1 AT2G15480 26.327 490 305 15 7 456 9 482 9.61e-34 132
MS.gene92083.t1 AT2G15480 26.148 501 302 16 7 456 9 492 2.42e-33 132
MS.gene92083.t1 AT4G34138 28.298 470 268 18 7 433 10 453 4.04e-31 125
MS.gene92083.t1 AT5G12890 26.407 462 297 18 7 437 9 458 1.27e-30 124
MS.gene92083.t1 AT4G34131 25.702 463 299 15 7 435 9 460 4.53e-30 122
MS.gene92083.t1 AT4G34135 25.624 441 288 12 7 416 10 441 5.29e-30 122
MS.gene92083.t1 AT2G16890 26.144 459 286 17 8 436 9 444 9.79e-30 121
MS.gene92083.t1 AT4G36770 37.946 224 117 8 227 435 224 440 9.93e-30 121
MS.gene92083.t1 AT2G36750 26.623 462 296 16 5 433 7 458 6.34e-29 119
MS.gene92083.t1 AT3G53150 25.966 466 295 15 7 428 21 480 4.07e-28 117
MS.gene92083.t1 AT2G36800 25.918 463 298 18 6 433 10 462 5.81e-28 116
MS.gene92083.t1 AT1G05675 26.770 452 277 18 8 434 6 428 1.08e-27 115
MS.gene92083.t1 AT2G36780 25.918 463 299 18 5 433 11 463 1.53e-27 115
MS.gene92083.t1 AT1G73880 25.472 424 259 13 8 399 14 412 2.33e-27 114
MS.gene92083.t1 AT2G31750 25.054 467 284 17 1 436 1 432 3.73e-27 113
MS.gene92083.t1 AT3G50740 25.435 460 294 14 8 435 7 449 5.33e-27 113
MS.gene92083.t1 AT2G31750 25.054 467 284 17 1 436 1 432 6.12e-27 113
MS.gene92083.t1 AT2G18570 34.239 184 112 2 259 434 260 442 1.42e-26 112
MS.gene92083.t1 AT1G01420 25.322 466 280 16 8 435 11 446 3.74e-26 111
MS.gene92083.t1 AT1G01420 25.536 466 279 17 8 435 8 443 4.17e-26 110
MS.gene92083.t1 AT2G30150 25.455 440 289 14 8 433 13 427 8.29e-26 109
MS.gene92083.t1 AT2G36760 25.216 464 303 15 4 433 10 463 8.87e-26 110
MS.gene92083.t1 AT2G16890 25.517 435 273 16 8 412 9 422 1.05e-25 108
MS.gene92083.t1 AT2G31790 26.247 461 270 21 8 434 8 432 1.26e-25 109
MS.gene92083.t1 AT4G01070 26.049 453 294 14 8 435 8 444 1.91e-25 108
MS.gene92083.t1 AT1G10400 25.838 507 271 23 4 451 3 463 2.04e-25 108
MS.gene92083.t1 AT5G14860 25.214 468 288 17 8 436 8 452 3.22e-25 108
MS.gene92083.t1 AT2G18560 31.000 200 124 3 243 434 159 352 4.33e-25 106
MS.gene92083.t1 AT2G30140 25.114 438 292 13 8 433 13 426 5.68e-25 107
MS.gene92083.t1 AT2G30140 25.850 441 284 16 8 433 13 425 8.71e-25 106
MS.gene92083.t1 AT2G30150 25.517 435 285 14 13 433 2 411 2.02e-24 105
MS.gene92083.t1 AT2G43820 24.590 488 283 18 8 456 7 448 6.17e-24 104
MS.gene92083.t1 AT2G36970 23.725 451 312 14 8 437 10 449 1.43e-23 103
MS.gene92083.t1 AT1G05680 25.000 452 285 18 8 434 6 428 7.65e-23 101
MS.gene92083.t1 AT4G15550 26.164 451 282 19 5 424 12 442 1.97e-22 100
MS.gene92083.t1 AT1G01390 25.523 478 287 18 8 444 8 457 2.20e-22 100
MS.gene92083.t1 AT1G01390 25.523 478 287 18 8 444 25 474 2.26e-22 100
MS.gene92083.t1 AT4G15480 23.725 451 299 17 6 429 17 449 6.48e-22 98.6
MS.gene92083.t1 AT3G21560 24.000 450 312 13 1 429 3 443 7.97e-22 98.6
MS.gene92083.t1 AT3G53160 25.159 473 298 18 1 433 1 457 1.08e-21 97.8
MS.gene92083.t1 AT2G29730 26.116 448 283 18 7 425 4 432 1.74e-21 97.1
MS.gene92083.t1 AT2G43840 24.481 482 289 17 8 455 7 447 2.37e-21 96.7
MS.gene92083.t1 AT5G59590 26.087 460 280 22 8 445 10 431 3.05e-21 96.3
MS.gene92083.t1 AT2G43840 24.481 482 289 17 8 455 7 447 3.99e-21 95.9
MS.gene92083.t1 AT5G59580 25.800 469 298 19 8 455 9 448 6.87e-21 95.1
MS.gene92083.t1 AT5G26310 29.915 234 142 5 216 434 215 441 1.84e-20 94.4
MS.gene92083.t1 AT1G05530 23.711 485 293 19 5 452 4 448 2.35e-20 93.6
MS.gene92083.t1 AT1G07250 29.000 200 136 4 259 454 275 472 2.70e-20 93.6
MS.gene92083.t1 AT3G21760 31.156 199 117 6 248 428 258 454 2.81e-20 93.6
MS.gene92083.t1 AT4G15490 22.940 449 300 14 8 429 8 437 5.32e-20 92.8
MS.gene92083.t1 AT4G15500 24.615 455 302 18 2 435 5 439 8.54e-20 92.0
MS.gene92083.t1 AT4G15280 29.964 277 161 9 208 454 232 505 8.57e-20 92.4
MS.gene92083.t1 AT5G66690 29.487 234 143 6 216 434 215 441 1.04e-19 92.0
MS.gene92083.t1 AT1G22360 23.974 463 300 17 8 436 10 454 1.07e-19 92.0
MS.gene92083.t1 AT4G15280 29.964 277 161 9 208 454 200 473 1.08e-19 92.0
MS.gene92083.t1 AT3G21790 29.020 255 156 7 223 454 226 478 1.14e-19 92.0
MS.gene92083.t1 AT1G05560 23.285 481 301 17 4 452 1 445 1.75e-19 91.3
MS.gene92083.t1 AT2G36770 36.066 183 103 6 259 428 281 462 2.21e-19 90.9
MS.gene92083.t1 AT1G07240 28.723 282 180 8 190 456 202 477 3.02e-19 90.5
MS.gene92083.t1 AT1G24100 23.395 483 299 16 8 454 11 458 3.39e-19 90.1
MS.gene92083.t1 AT1G05560 23.493 481 300 17 4 452 51 495 3.51e-19 90.5
MS.gene92083.t1 AT4G15260 28.638 213 133 5 259 454 144 354 4.84e-19 89.0
MS.gene92083.t1 AT3G21800 31.016 187 110 4 259 428 265 449 7.79e-19 89.4
MS.gene92083.t1 AT3G46670 25.280 447 290 17 16 448 17 433 8.83e-19 89.0
MS.gene92083.t1 AT5G38040 25.764 458 295 15 16 454 18 449 1.64e-18 88.2
MS.gene92083.t1 AT2G29710 32.086 187 113 6 245 425 254 432 1.76e-18 88.2
MS.gene92083.t1 AT3G16520 33.939 165 103 3 258 418 262 424 2.66e-18 87.4
MS.gene92083.t1 AT3G16520 33.939 165 103 3 258 418 262 424 2.95e-18 87.4
MS.gene92083.t1 AT3G46660 33.175 211 120 9 241 445 242 437 3.49e-18 87.0
MS.gene92083.t1 AT3G16520 33.939 165 103 3 258 418 262 424 3.83e-18 87.0
MS.gene92083.t1 AT5G05870 27.757 263 172 8 206 458 204 458 4.89e-18 86.7
MS.gene92083.t1 AT1G06000 23.002 413 244 12 8 394 10 374 6.26e-18 86.3
MS.gene92083.t1 AT2G29740 31.122 196 125 6 241 428 255 448 6.46e-18 86.3
MS.gene92083.t1 AT3G22250 32.184 174 100 7 259 428 276 435 6.81e-18 86.3
MS.gene92083.t1 AT3G21750 26.531 245 158 5 230 454 226 468 8.00e-18 86.3
MS.gene92083.t1 AT1G07260 27.876 226 151 6 241 456 250 473 2.33e-17 84.7
MS.gene92083.t1 AT3G21780 31.414 191 109 6 259 433 259 443 2.65e-17 84.7
MS.gene92083.t1 AT2G23250 29.508 183 121 5 252 434 237 411 4.38e-17 83.6
MS.gene92083.t1 AT3G55700 31.343 201 128 6 247 445 248 440 4.39e-17 84.0
MS.gene92083.t1 AT3G11340 31.609 174 107 6 258 429 252 415 4.41e-17 83.6
MS.gene92083.t1 AT5G05890 29.317 249 157 9 196 429 194 438 4.49e-17 83.6
MS.gene92083.t1 AT1G22360 23.542 463 290 18 8 436 10 442 6.41e-17 83.2
MS.gene92083.t1 AT2G29750 31.892 185 116 6 241 417 255 437 1.68e-16 82.0
MS.gene92083.t1 AT3G55710 35.000 140 86 4 259 396 263 399 6.37e-16 80.1
MS.gene92083.t1 AT1G22380 22.489 458 313 15 8 436 13 457 7.16e-16 80.1
MS.gene92083.t1 AT4G14090 29.680 219 132 10 241 448 238 445 1.05e-15 79.7
MS.gene92083.t1 AT2G23260 27.869 183 124 5 253 435 256 430 1.06e-15 79.3
MS.gene92083.t1 AT5G17030 23.291 468 303 22 8 450 12 448 3.64e-15 77.8
MS.gene92083.t1 AT1G78270 30.000 180 113 6 259 436 289 457 3.86e-15 77.8
MS.gene92083.t1 AT2G36790 32.973 185 112 5 259 433 280 462 7.34e-15 77.0
MS.gene92083.t1 AT1G22400 31.282 195 120 7 259 450 291 474 1.40e-14 76.3
MS.gene92083.t1 AT3G02100 22.222 486 292 19 8 450 13 455 1.67e-14 75.9
MS.gene92083.t1 AT5G17050 21.978 455 297 18 8 436 12 434 4.90e-14 74.3
MS.gene92083.t1 AT2G26480 29.245 212 127 9 239 447 238 429 1.05e-13 73.2
MS.gene92083.t1 AT5G17040 26.289 194 129 6 258 450 252 432 1.40e-12 69.7
MS.gene92083.t1 AT5G17040 26.289 194 129 6 258 450 150 330 2.36e-12 68.6
MS.gene92083.t1 AT1G22340 26.966 178 121 4 259 436 290 458 4.46e-12 68.6
MS.gene92083.t1 AT5G38010 25.109 458 291 18 8 445 10 435 5.90e-12 67.8
MS.gene92083.t1 AT3G46720 27.835 194 118 6 253 445 250 422 9.80e-12 67.0

Find 86 sgRNAs with CRISPR-Local

Find 113 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAGGAAAAGGGATTGTTTA+TGG 0.197222 2.4:-15869843 MS.gene92083:CDS
GGAAAACCTTATCTACTTTC+AGG 0.218620 2.4:-15870113 MS.gene92083:CDS
GTATCAAAAGTCTTCAATAT+TGG 0.261714 2.4:-15870427 MS.gene92083:CDS
GAACCATATGCTGAATTTCT+TGG 0.266462 2.4:-15870146 MS.gene92083:CDS
GATCTCAAGCACCCACCTTC+AGG 0.295653 2.4:-15870329 MS.gene92083:CDS
ATCCTTTCATTGAACCCTTC+AGG 0.299605 2.4:+15869867 None:intergenic
TTGCTTGGTCTTGAGTTAAC+AGG 0.300933 2.4:-15869951 MS.gene92083:CDS
AGGTGATGAGGTTTGGGTTA+AGG 0.305801 2.4:+15870654 None:intergenic
GGGACAAAGGTGATGAGGTT+TGG 0.323609 2.4:+15870647 None:intergenic
TTGTTGGAGAGGTGAAGATA+TGG 0.326912 2.4:+15870749 None:intergenic
CATATTGATGGTCTTCCCTT+TGG 0.332617 2.4:-15870611 MS.gene92083:CDS
AAGGGATTGTTTATGGAAGT+TGG 0.335805 2.4:-15869836 MS.gene92083:CDS
TTTCCAAGAAATTCAGCATA+TGG 0.343543 2.4:+15870143 None:intergenic
GTTAACGAGTGCCTCGGTTA+TGG 0.344448 2.4:+15869746 None:intergenic
GGACAAAGGTGATGAGGTTT+GGG 0.351514 2.4:+15870648 None:intergenic
CTCAATGTTCCTCATATTGA+TGG 0.355741 2.4:-15870623 MS.gene92083:CDS
GGGTTCAATGAAAGGATTAA+AGG 0.361758 2.4:-15869861 MS.gene92083:CDS
TCAATAGATTCAAATCCATT+AGG 0.363401 2.4:+15869900 None:intergenic
TGTTGGAGAGGTGAAGATAT+GGG 0.366037 2.4:+15870750 None:intergenic
ACAAATTGAACTTCTTCTTA+AGG 0.376446 2.4:-15870516 MS.gene92083:CDS
GGCTTTAGTGCTGCAAGAAA+TGG 0.379160 2.4:+15869924 None:intergenic
ATGAAAGGATTAAAGGAAAA+GGG 0.406889 2.4:-15869854 MS.gene92083:CDS
TAAAGCTTGATGGATGAATC+AGG 0.414411 2.4:+15870302 None:intergenic
TTCATGTTGATAAAGCTTGA+TGG 0.415216 2.4:+15870292 None:intergenic
CAGTTTCAAGAGTTGTTGCT+TGG 0.416604 2.4:-15869966 MS.gene92083:CDS
AAAATGGGAATCATGGCTTA+AGG 0.418141 2.4:-15870051 MS.gene92083:CDS
AATGAAAGGATTAAAGGAAA+AGG 0.426984 2.4:-15869855 MS.gene92083:CDS
GTTGAGAAAGGTGATGAAGA+TGG 0.433750 2.4:-15869633 MS.gene92083:CDS
AATCAAAGAAAACTATTTGT+GGG 0.437422 2.4:+15870486 None:intergenic
ATGGATGATGAGAATGAAGT+TGG 0.453273 2.4:-15869567 MS.gene92083:CDS
AATGTTTCCATGGTTTGCTA+TGG 0.456397 2.4:-15870783 MS.gene92083:CDS
GCAGCACTAAAGCCACCTAA+TGG 0.459950 2.4:-15869915 MS.gene92083:CDS
AATGAGAGGGACTAAAGAAA+AGG 0.460266 2.4:+15870565 None:intergenic
ATTCTAGAACACCCTTCTGT+TGG 0.469353 2.4:-15869798 MS.gene92083:CDS
AAATCAAAGAAAACTATTTG+TGG 0.469794 2.4:+15870485 None:intergenic
ACAAGTTTAGCTGATGCAAT+TGG 0.470591 2.4:-15870194 MS.gene92083:CDS
TCATCGAGGAAACTTGTCTT+CGG 0.476363 2.4:-15870254 MS.gene92083:CDS
TTGAAGAAGCTTTACCTGAA+GGG 0.477151 2.4:-15869881 MS.gene92083:CDS
AAATGGGAATCATGGCTTAA+GGG 0.478566 2.4:-15870050 MS.gene92083:CDS
TACCTGAAGGGTTCAATGAA+AGG 0.480707 2.4:-15869869 MS.gene92083:CDS
ATCTCAAGCACCCACCTTCA+GGG 0.489003 2.4:-15870328 MS.gene92083:CDS
TTCACATAGCAATGTTTCCA+TGG 0.496374 2.4:-15870793 MS.gene92083:CDS
GTTGGAGAGGTGAAGATATG+GGG 0.500001 2.4:+15870751 None:intergenic
ATGTTTCCATGGTTTGCTAT+GGG 0.504571 2.4:-15870782 MS.gene92083:CDS
GCTGATGCAATTGGTTTCAA+AGG 0.508787 2.4:-15870185 MS.gene92083:CDS
AAGGTTGAGATGTTGTAACT+TGG 0.511625 2.4:+15870673 None:intergenic
CCAAGACATAGCCAAGGAAA+AGG 0.512525 2.4:-15870365 MS.gene92083:CDS
ATGAGAGGGACTAAAGAAAA+GGG 0.524815 2.4:+15870566 None:intergenic
CCCTCTCATTGCTACAGCAA+TGG 0.526999 2.4:-15870552 MS.gene92083:CDS
ATGAGTGAAAAGATGAAAGT+TGG 0.529935 2.4:-15869663 MS.gene92083:CDS
AAGGGAAGACCATCAATATG+AGG 0.535527 2.4:+15870614 None:intergenic
ATTGAAGAAGCTTTACCTGA+AGG 0.537181 2.4:-15869882 MS.gene92083:CDS
GTTGGTATAGAAGTTGAGAA+AGG 0.540798 2.4:-15869645 MS.gene92083:CDS
TGAAGATGTTTCAGCACCAA+AGG 0.541229 2.4:+15870595 None:intergenic
AGGGGACCTGAAAGTAGATA+AGG 0.543856 2.4:+15870107 None:intergenic
TTGAGAAAGGTGATGAAGAT+GGG 0.554445 2.4:-15869632 MS.gene92083:CDS
TTTGGTGTTTCAGGTAATAG+GGG 0.556410 2.4:+15870089 None:intergenic
ATAGATTCAAATCCATTAGG+TGG 0.565472 2.4:+15869903 None:intergenic
GGGATTCAAGCATGGTTCCG+TGG 0.573311 2.4:-15870030 MS.gene92083:CDS
GAAGATGTTTCAGCACCAAA+GGG 0.579195 2.4:+15870596 None:intergenic
TTATACGATCGTTTGCACAT+AGG 0.579668 2.4:-15870218 MS.gene92083:CDS
GAATCAGGGTACCCTGAAGG+TGG 0.580018 2.4:+15870317 None:intergenic
TTCAATTTCTATCTTCATCG+AGG 0.580795 2.4:-15870268 MS.gene92083:CDS
GTTATGAAACATCCAACAGA+AGG 0.588945 2.4:+15869786 None:intergenic
AACATTGCTATGTGAAGAGG+AGG 0.593159 2.4:+15870800 None:intergenic
GGAAACATTGCTATGTGAAG+AGG 0.596025 2.4:+15870797 None:intergenic
AGGAACATTGAGAGGGACAA+AGG 0.596057 2.4:+15870634 None:intergenic
TCAATATGAGGAACATTGAG+AGG 0.597639 2.4:+15870626 None:intergenic
ACTCGTTAACACGTGTCAGT+TGG 0.599240 2.4:-15869733 MS.gene92083:CDS
TCCATTGCTGTAGCAATGAG+AGG 0.606314 2.4:+15870551 None:intergenic
TGGCTTAAGGGATTCAAGCA+TGG 0.607527 2.4:-15870038 MS.gene92083:CDS
AAGAGGAGGAAGAGATCCCA+TGG 0.613093 2.4:+15870814 None:intergenic
GATGAATCAGGGTACCCTGA+AGG 0.614727 2.4:+15870314 None:intergenic
TGAGAGGGACAAAGGTGATG+AGG 0.616523 2.4:+15870642 None:intergenic
TGAAGCTGTGAAAATTGTGA+TGG 0.621129 2.4:-15869586 MS.gene92083:CDS
AAAGCTTGATGGATGAATCA+GGG 0.625829 2.4:+15870303 None:intergenic
CCATTGCTGTAGCAATGAGA+GGG 0.641859 2.4:+15870552 None:intergenic
ACACGTGTTAACGAGTGCCT+CGG 0.644065 2.4:+15869740 None:intergenic
AATCAGGGTACCCTGAAGGT+GGG 0.645110 2.4:+15870318 None:intergenic
CAATATGAGGAACATTGAGA+GGG 0.658346 2.4:+15870627 None:intergenic
AAGTGTCCCATAGCAAACCA+TGG 0.661811 2.4:+15870776 None:intergenic
AATGGACCAAGACATAGCCA+AGG 0.696804 2.4:-15870371 MS.gene92083:CDS
TTATGAAACATCCAACAGAA+GGG 0.698749 2.4:+15869787 None:intergenic
TGGAGCTGCTTCCATAACCG+AGG 0.702297 2.4:-15869757 MS.gene92083:CDS
ATATGATCAACACCTACACG+TGG 0.735778 2.4:+15869702 None:intergenic
GGATGTTTCATAACACACTG+TGG 0.766209 2.4:-15869777 MS.gene92083:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAAAATAAGATATTGAAAA+TGG + chr2.4:15869878-15869897 None:intergenic 15.0%
!! GAAAAAATCATAATGAATTA+AGG - chr2.4:15870737-15870756 MS.gene92083:CDS 15.0%
!!! CATTTTCAATATCTTATTTT+TGG - chr2.4:15869876-15869895 MS.gene92083:CDS 15.0%
!!! TTTTCTTTGATTTTCAATAT+TGG - chr2.4:15869795-15869814 MS.gene92083:CDS 15.0%
!! AAACAACTTTAGATGAAAAA+TGG - chr2.4:15870203-15870222 MS.gene92083:CDS 20.0%
!! AAATCAAAGAAAACTATTTG+TGG + chr2.4:15869788-15869807 None:intergenic 20.0%
!! AACAACTTTAGATGAAAAAT+GGG - chr2.4:15870204-15870223 MS.gene92083:CDS 20.0%
!! AATCAAAGAAAACTATTTGT+GGG + chr2.4:15869787-15869806 None:intergenic 20.0%
!!! GAATTTCTTGGAAATTTTTA+TGG - chr2.4:15870136-15870155 MS.gene92083:CDS 20.0%
!!! TCAATATCTTATTTTTGGAA+TGG - chr2.4:15869881-15869900 MS.gene92083:CDS 20.0%
!!! TGAAACTGATTTTTTTCTAA+TGG + chr2.4:15870292-15870311 None:intergenic 20.0%
!!! TTTTCATCTAAAGTTGTTTT+TGG + chr2.4:15870202-15870221 None:intergenic 20.0%
! AATGAAAGGATTAAAGGAAA+AGG - chr2.4:15870415-15870434 MS.gene92083:CDS 25.0%
! ACAAATTGAACTTCTTCTTA+AGG - chr2.4:15869754-15869773 MS.gene92083:CDS 25.0%
! ATGAAAGGATTAAAGGAAAA+GGG - chr2.4:15870416-15870435 MS.gene92083:CDS 25.0%
! GTATCAAAAGTCTTCAATAT+TGG - chr2.4:15869843-15869862 MS.gene92083:CDS 25.0%
! TCAATAGATTCAAATCCATT+AGG + chr2.4:15870373-15870392 None:intergenic 25.0%
!! AATTTTTGTGAAAAGCTTCA+AGG - chr2.4:15870802-15870821 MS.gene92083:CDS 25.0%
!!! AACTTGGTTTGTGTTTTTTT+AGG + chr2.4:15869584-15869603 None:intergenic 25.0%
!!! ACTTGGTTTGTGTTTTTTTA+GGG + chr2.4:15869583-15869602 None:intergenic 25.0%
AAAGGAAAAGGGATTGTTTA+TGG - chr2.4:15870427-15870446 MS.gene92083:CDS 30.0%
ATAGATTCAAATCCATTAGG+TGG + chr2.4:15870370-15870389 None:intergenic 30.0%
ATGAGTGAAAAGATGAAAGT+TGG - chr2.4:15870607-15870626 MS.gene92083:CDS 30.0%
TAGATGAAAAATGGGAATCA+TGG - chr2.4:15870212-15870231 MS.gene92083:CDS 30.0%
TCCAACAAATTAGCAAAAAG+AGG - chr2.4:15869536-15869555 MS.gene92083:CDS 30.0%
TTATGAAACATCCAACAGAA+GGG + chr2.4:15870486-15870505 None:intergenic 30.0%
TTCAATTTCTATCTTCATCG+AGG - chr2.4:15870002-15870021 MS.gene92083:CDS 30.0%
TTTCCAAGAAATTCAGCATA+TGG + chr2.4:15870130-15870149 None:intergenic 30.0%
! TTCATGTTGATAAAGCTTGA+TGG + chr2.4:15869981-15870000 None:intergenic 30.0%
!! ACCTCTTTTTGCTAATTTGT+TGG + chr2.4:15869540-15869559 None:intergenic 30.0%
!!! AAAGTTGTTTTTGGTGTTTC+AGG + chr2.4:15870193-15870212 None:intergenic 30.0%
!!! TTTTGGTGTTTCAGGTAATA+GGG + chr2.4:15870185-15870204 None:intergenic 30.0%
!!! TTTTTGCTAATTTGTTGGAG+AGG + chr2.4:15869535-15869554 None:intergenic 30.0%
!!! TTTTTGGTGTTTCAGGTAAT+AGG + chr2.4:15870186-15870205 None:intergenic 30.0%
AAAATGGGAATCATGGCTTA+AGG - chr2.4:15870219-15870238 MS.gene92083:CDS 35.0%
AAATGGGAATCATGGCTTAA+GGG - chr2.4:15870220-15870239 MS.gene92083:CDS 35.0%
AAGGGATTGTTTATGGAAGT+TGG - chr2.4:15870434-15870453 MS.gene92083:CDS 35.0%
AAGGTTGAGATGTTGTAACT+TGG + chr2.4:15869600-15869619 None:intergenic 35.0%
AATGAGAGGGACTAAAGAAA+AGG + chr2.4:15869708-15869727 None:intergenic 35.0%
ACAAGTTTAGCTGATGCAAT+TGG - chr2.4:15870076-15870095 MS.gene92083:CDS 35.0%
ATGAGAGGGACTAAAGAAAA+GGG + chr2.4:15869707-15869726 None:intergenic 35.0%
ATGGATGATGAGAATGAAGT+TGG - chr2.4:15870703-15870722 MS.gene92083:CDS 35.0%
ATTGAAGAAGCTTTACCTGA+AGG - chr2.4:15870388-15870407 MS.gene92083:CDS 35.0%
CAATATGAGGAACATTGAGA+GGG + chr2.4:15869646-15869665 None:intergenic 35.0%
CCAAACTTGACTCAAAAACT+TGG - chr2.4:15869821-15869840 MS.gene92083:CDS 35.0%
CTCAATGTTCCTCATATTGA+TGG - chr2.4:15869647-15869666 MS.gene92083:CDS 35.0%
GAACCATATGCTGAATTTCT+TGG - chr2.4:15870124-15870143 MS.gene92083:CDS 35.0%
GGAAAACCTTATCTACTTTC+AGG - chr2.4:15870157-15870176 MS.gene92083:CDS 35.0%
GGGTTCAATGAAAGGATTAA+AGG - chr2.4:15870409-15870428 MS.gene92083:CDS 35.0%
GTTATGAAACATCCAACAGA+AGG + chr2.4:15870487-15870506 None:intergenic 35.0%
GTTGGTATAGAAGTTGAGAA+AGG - chr2.4:15870625-15870644 MS.gene92083:CDS 35.0%
TCAATATGAGGAACATTGAG+AGG + chr2.4:15869647-15869666 None:intergenic 35.0%
TCCATATGCACAAAAAACCA+CGG + chr2.4:15870260-15870279 None:intergenic 35.0%
TGAAGCTGTGAAAATTGTGA+TGG - chr2.4:15870684-15870703 MS.gene92083:CDS 35.0%
TTATACGATCGTTTGCACAT+AGG - chr2.4:15870052-15870071 MS.gene92083:CDS 35.0%
TTCACATAGCAATGTTTCCA+TGG - chr2.4:15869477-15869496 MS.gene92083:CDS 35.0%
TTGAAGAAGCTTTACCTGAA+GGG - chr2.4:15870389-15870408 MS.gene92083:CDS 35.0%
TTGAGAAAGGTGATGAAGAT+GGG - chr2.4:15870638-15870657 MS.gene92083:CDS 35.0%
! AAAGCTTGATGGATGAATCA+GGG + chr2.4:15869970-15869989 None:intergenic 35.0%
! CTACAGTTAATCCTTTTCCT+TGG + chr2.4:15869919-15869938 None:intergenic 35.0%
! TAAAGCTTGATGGATGAATC+AGG + chr2.4:15869971-15869990 None:intergenic 35.0%
! TTTTGTGCATATGGAAGTGA+AGG - chr2.4:15870265-15870284 MS.gene92083:CDS 35.0%
!! AATGTTTCCATGGTTTGCTA+TGG - chr2.4:15869487-15869506 MS.gene92083:CDS 35.0%
!! ATGTTTCCATGGTTTGCTAT+GGG - chr2.4:15869488-15869507 MS.gene92083:CDS 35.0%
!! TTTGGTGTTTCAGGTAATAG+GGG + chr2.4:15870184-15870203 None:intergenic 35.0%
!!! CCAAGTTTTTGAGTCAAGTT+TGG + chr2.4:15869824-15869843 None:intergenic 35.0%
AACATTGCTATGTGAAGAGG+AGG + chr2.4:15869473-15869492 None:intergenic 40.0%
AAGGGAAGACCATCAATATG+AGG + chr2.4:15869659-15869678 None:intergenic 40.0%
ATATGATCAACACCTACACG+TGG + chr2.4:15870571-15870590 None:intergenic 40.0%
ATCCTTTCATTGAACCCTTC+AGG + chr2.4:15870406-15870425 None:intergenic 40.0%
CAGTTTCAAGAGTTGTTGCT+TGG - chr2.4:15870304-15870323 MS.gene92083:CDS 40.0%
GAAGATGTTTCAGCACCAAA+GGG + chr2.4:15869677-15869696 None:intergenic 40.0%
GGAAACATTGCTATGTGAAG+AGG + chr2.4:15869476-15869495 None:intergenic 40.0%
GGATGTTTCATAACACACTG+TGG - chr2.4:15870493-15870512 MS.gene92083:CDS 40.0%
GTTGAGAAAGGTGATGAAGA+TGG - chr2.4:15870637-15870656 MS.gene92083:CDS 40.0%
TACCTGAAGGGTTCAATGAA+AGG - chr2.4:15870401-15870420 MS.gene92083:CDS 40.0%
TCATCGAGGAAACTTGTCTT+CGG - chr2.4:15870016-15870035 MS.gene92083:CDS 40.0%
TGAAGATGTTTCAGCACCAA+AGG + chr2.4:15869678-15869697 None:intergenic 40.0%
TGTTGGAGAGGTGAAGATAT+GGG + chr2.4:15869523-15869542 None:intergenic 40.0%
TTGTTGGAGAGGTGAAGATA+TGG + chr2.4:15869524-15869543 None:intergenic 40.0%
! CATATTGATGGTCTTCCCTT+TGG - chr2.4:15869659-15869678 MS.gene92083:CDS 40.0%
! GCTGATGCAATTGGTTTCAA+AGG - chr2.4:15870085-15870104 MS.gene92083:CDS 40.0%
!! ATTCTAGAACACCCTTCTGT+TGG - chr2.4:15870472-15870491 MS.gene92083:CDS 40.0%
!! TTGCTTGGTCTTGAGTTAAC+AGG - chr2.4:15870319-15870338 MS.gene92083:CDS 40.0%
!!! TCCGTGGTTTTTTGTGCATA+TGG - chr2.4:15870256-15870275 MS.gene92083:CDS 40.0%
AAGTGTCCCATAGCAAACCA+TGG + chr2.4:15869497-15869516 None:intergenic 45.0%
AATGGACCAAGACATAGCCA+AGG - chr2.4:15869899-15869918 MS.gene92083:CDS 45.0%
ACTCGTTAACACGTGTCAGT+TGG - chr2.4:15870537-15870556 MS.gene92083:CDS 45.0%
AGGAACATTGAGAGGGACAA+AGG + chr2.4:15869639-15869658 None:intergenic 45.0%
AGGGGACCTGAAAGTAGATA+AGG + chr2.4:15870166-15870185 None:intergenic 45.0%
CCAAGACATAGCCAAGGAAA+AGG - chr2.4:15869905-15869924 MS.gene92083:CDS 45.0%
CCATTGCTGTAGCAATGAGA+GGG + chr2.4:15869721-15869740 None:intergenic 45.0%
GGACAAAGGTGATGAGGTTT+GGG + chr2.4:15869625-15869644 None:intergenic 45.0%
GTTGGAGAGGTGAAGATATG+GGG + chr2.4:15869522-15869541 None:intergenic 45.0%
TCCATTGCTGTAGCAATGAG+AGG + chr2.4:15869722-15869741 None:intergenic 45.0%
TGGCTTAAGGGATTCAAGCA+TGG - chr2.4:15870232-15870251 MS.gene92083:CDS 45.0%
! AGGTGATGAGGTTTGGGTTA+AGG + chr2.4:15869619-15869638 None:intergenic 45.0%
! CCTTTTCCTTGGCTATGTCT+TGG + chr2.4:15869908-15869927 None:intergenic 45.0%
! GGCTTTAGTGCTGCAAGAAA+TGG + chr2.4:15870349-15870368 None:intergenic 45.0%
!!! TTGGTTTTGTTGCCACGTGT+AGG - chr2.4:15870556-15870575 MS.gene92083:CDS 45.0%
ACACGTGTTAACGAGTGCCT+CGG + chr2.4:15870533-15870552 None:intergenic 50.0%
ATCTCAAGCACCCACCTTCA+GGG - chr2.4:15869942-15869961 MS.gene92083:CDS 50.0%
CCCTCTCATTGCTACAGCAA+TGG - chr2.4:15869718-15869737 MS.gene92083:CDS 50.0%
GCAGCACTAAAGCCACCTAA+TGG - chr2.4:15870355-15870374 MS.gene92083:CDS 50.0%
GGGACAAAGGTGATGAGGTT+TGG + chr2.4:15869626-15869645 None:intergenic 50.0%
GTTAACGAGTGCCTCGGTTA+TGG + chr2.4:15870527-15870546 None:intergenic 50.0%
TGAGAGGGACAAAGGTGATG+AGG + chr2.4:15869631-15869650 None:intergenic 50.0%
! AATCAGGGTACCCTGAAGGT+GGG + chr2.4:15869955-15869974 None:intergenic 50.0%
! GATGAATCAGGGTACCCTGA+AGG + chr2.4:15869959-15869978 None:intergenic 50.0%
GATCTCAAGCACCCACCTTC+AGG - chr2.4:15869941-15869960 MS.gene92083:CDS 55.0%
GGGATTCAAGCATGGTTCCG+TGG - chr2.4:15870240-15870259 MS.gene92083:CDS 55.0%
TGGAGCTGCTTCCATAACCG+AGG - chr2.4:15870513-15870532 MS.gene92083:CDS 55.0%
! GAATCAGGGTACCCTGAAGG+TGG + chr2.4:15869956-15869975 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 15869458 15870834 15869458 ID=MS.gene92083
chr2.4 mRNA 15869458 15870834 15869458 ID=MS.gene92083.t1;Parent=MS.gene92083
chr2.4 exon 15869458 15870834 15869458 ID=MS.gene92083.t1.exon1;Parent=MS.gene92083.t1
chr2.4 CDS 15869458 15870834 15869458 ID=cds.MS.gene92083.t1;Parent=MS.gene92083.t1
Gene Sequence

>MS.gene92083

ATGGGATCTCTTCCTCCTCTTCACATAGCAATGTTTCCATGGTTTGCTATGGGACACTTAACCCCATATCTTCACCTCTCCAACAAATTAGCAAAAAGAGGTCACAAAATATCATTCTTCATCCCTAAAAAAACACAAACCAAGTTACAACATCTCAACCTTAACCCAAACCTCATCACCTTTGTCCCTCTCAATGTTCCTCATATTGATGGTCTTCCCTTTGGTGCTGAAACATCTTCAGATGTACCCTTTTCTTTAGTCCCTCTCATTGCTACAGCAATGGATCAAACAGAAAAACAAATTGAACTTCTTCTTAAGGAACTAAACCCACAAATAGTTTTCTTTGATTTTCAATATTGGCTACCAAACTTGACTCAAAAACTTGGTATCAAAAGTCTTCAATATTGGATAACTAGTCCATTTTCAATATCTTATTTTTGGAATGGACCAAGACATAGCCAAGGAAAAGGATTAACTGTAGATGATCTCAAGCACCCACCTTCAGGGTACCCTGATTCATCCATCAAGCTTTATCAACATGAACTTCAATTTCTATCTTCATCGAGGAAACTTGTCTTCGGAAGTGATGTATTTTTATACGATCGTTTGCACATAGGTACAAGTTTAGCTGATGCAATTGGTTTCAAAGGCTGCAAAGAACTTGATGAACCATATGCTGAATTTCTTGGAAATTTTTATGGAAAACCTTATCTACTTTCAGGTCCCCTATTACCTGAAACACCAAAAACAACTTTAGATGAAAAATGGGAATCATGGCTTAAGGGATTCAAGCATGGTTCCGTGGTTTTTTGTGCATATGGAAGTGAAGGTCCATTAGAAAAAAATCAGTTTCAAGAGTTGTTGCTTGGTCTTGAGTTAACAGGTTTTCCATTTCTTGCAGCACTAAAGCCACCTAATGGATTTGAATCTATTGAAGAAGCTTTACCTGAAGGGTTCAATGAAAGGATTAAAGGAAAAGGGATTGTTTATGGAAGTTGGATTCAACAACAGTTGATTCTAGAACACCCTTCTGTTGGATGTTTCATAACACACTGTGGAGCTGCTTCCATAACCGAGGCACTCGTTAACACGTGTCAGTTGGTTTTGTTGCCACGTGTAGGTGTTGATCATATTATGAATGCAAGAATGATGAGTGAAAAGATGAAAGTTGGTATAGAAGTTGAGAAAGGTGATGAAGATGGGTTGTTTACAAAAGAAAGTGTGTGTGAAGCTGTGAAAATTGTGATGGATGATGAGAATGAAGTTGGAAGAGAAGTGAGAAAAAATCATAATGAATTAAGGAAGTTTTTATTGAGTGAGAATTTAGAGTCTTCTTGTGTTGATAATTTTTGTGAAAAGCTTCAAGGTTTGATTTAA

Protein sequence

>MS.gene92083.t1

MGSLPPLHIAMFPWFAMGHLTPYLHLSNKLAKRGHKISFFIPKKTQTKLQHLNLNPNLITFVPLNVPHIDGLPFGAETSSDVPFSLVPLIATAMDQTEKQIELLLKELNPQIVFFDFQYWLPNLTQKLGIKSLQYWITSPFSISYFWNGPRHSQGKGLTVDDLKHPPSGYPDSSIKLYQHELQFLSSSRKLVFGSDVFLYDRLHIGTSLADAIGFKGCKELDEPYAEFLGNFYGKPYLLSGPLLPETPKTTLDEKWESWLKGFKHGSVVFCAYGSEGPLEKNQFQELLLGLELTGFPFLAALKPPNGFESIEEALPEGFNERIKGKGIVYGSWIQQQLILEHPSVGCFITHCGAASITEALVNTCQLVLLPRVGVDHIMNARMMSEKMKVGIEVEKGDEDGLFTKESVCEAVKIVMDDENEVGREVRKNHNELRKFLLSENLESSCVDNFCEKLQGLI