AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene69832


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69832.t1 MTR_2g083420 82.096 458 58 1 1 458 1 434 0.0 776
MS.gene69832.t1 MTR_2g083390 81.878 458 59 1 1 458 1 434 0.0 771
MS.gene69832.t1 MTR_2g083480 82.096 458 82 0 1 458 1 458 0.0 771
MS.gene69832.t1 MTR_2g083430 78.821 458 97 0 1 458 1 458 0.0 718
MS.gene69832.t1 MTR_2g083380 66.376 458 154 0 1 458 18 475 0.0 617
MS.gene69832.t1 MTR_2g083490 65.939 458 156 0 1 458 1 458 0.0 613
MS.gene69832.t1 MTR_2g083360 69.536 453 33 4 6 458 27 374 0.0 598
MS.gene69832.t1 MTR_4g079270 61.087 460 175 3 1 458 1 458 0.0 578
MS.gene69832.t1 MTR_4g079250 61.304 460 174 3 1 458 1 458 0.0 577
MS.gene69832.t1 MTR_2g014900 56.541 451 195 1 8 458 7 456 0.0 526
MS.gene69832.t1 MTR_2g086283 50.112 447 111 7 11 457 1 335 1.11e-133 389
MS.gene69832.t1 MTR_1g090270 40.652 460 255 11 7 457 14 464 8.68e-110 332
MS.gene69832.t1 MTR_4g059370 40.432 324 180 6 141 457 74 391 4.43e-77 246
MS.gene69832.t1 MTR_7g067330 32.120 467 259 16 2 454 3 425 1.42e-64 214
MS.gene69832.t1 MTR_8g068330 31.078 473 302 13 1 458 1 464 2.84e-64 214
MS.gene69832.t1 MTR_8g068340 30.977 481 282 15 2 454 6 464 2.19e-62 209
MS.gene69832.t1 MTR_8g068360 30.342 468 309 11 2 458 6 467 2.34e-62 209
MS.gene69832.t1 MTR_7g067120 31.317 463 262 15 2 451 3 422 7.28e-61 205
MS.gene69832.t1 MTR_4g123553 30.454 463 290 17 6 454 13 457 5.11e-59 201
MS.gene69832.t1 MTR_4g079280 44.737 228 81 3 11 238 1 183 4.74e-58 189
MS.gene69832.t1 MTR_2g008226 31.992 472 285 18 6 454 8 466 7.42e-58 198
MS.gene69832.t1 MTR_2g008225 29.979 467 302 12 2 455 9 463 7.52e-58 198
MS.gene69832.t1 MTR_2g008220 30.043 466 303 13 2 455 8 462 1.03e-57 197
MS.gene69832.t1 MTR_2g014930 40.138 289 93 5 17 305 9 217 7.07e-57 188
MS.gene69832.t1 MTR_6g042310 30.687 466 283 17 7 454 17 460 2.46e-55 191
MS.gene69832.t1 MTR_6g036650 29.053 475 298 16 1 454 11 467 4.38e-55 191
MS.gene69832.t1 MTR_2g083440 80.392 102 20 0 357 458 11 112 1.47e-53 175
MS.gene69832.t1 MTR_2g046620 28.416 461 302 14 6 454 14 458 1.08e-48 173
MS.gene69832.t1 MTR_8g007565 31.151 443 271 15 7 428 6 435 9.24e-46 165
MS.gene69832.t1 MTR_8g007650 31.377 443 270 15 7 428 6 435 9.34e-46 165
MS.gene69832.t1 MTR_1g090280 43.716 183 98 3 279 457 133 314 1.74e-44 158
MS.gene69832.t1 MTR_4g077960 27.152 453 296 16 17 454 1 434 2.39e-43 158
MS.gene69832.t1 MTR_5g066410 28.571 455 274 12 11 441 1 428 7.16e-43 157
MS.gene69832.t1 MTR_8g071070 28.692 474 305 15 8 457 7 471 2.69e-38 145
MS.gene69832.t1 MTR_5g087620 27.721 487 279 19 8 443 10 474 6.76e-35 136
MS.gene69832.t1 MTR_8g066610 28.033 478 292 19 1 443 1 461 7.40e-35 135
MS.gene69832.t1 MTR_0009s0240 28.148 405 267 13 8 397 7 402 5.25e-33 130
MS.gene69832.t1 MTR_6g023665 28.698 453 267 19 9 427 14 444 4.50e-32 128
MS.gene69832.t1 MTR_4g485590 28.851 409 233 14 8 394 9 381 1.46e-31 125
MS.gene69832.t1 MTR_2g098430 25.495 455 304 14 9 437 7 452 1.85e-31 126
MS.gene69832.t1 MTR_8g009055 29.060 468 262 16 7 434 5 442 4.08e-31 125
MS.gene69832.t1 MTR_1g062380 27.056 462 286 18 7 428 15 465 5.56e-31 125
MS.gene69832.t1 MTR_8g027885 27.907 473 295 18 5 452 16 467 5.09e-30 122
MS.gene69832.t1 MTR_6g488280 29.103 457 260 19 9 427 7 437 5.11e-30 122
MS.gene69832.t1 MTR_0428s0010 29.103 457 260 19 9 427 7 437 5.11e-30 122
MS.gene69832.t1 MTR_4g031800 26.749 486 303 17 6 458 7 472 6.31e-30 122
MS.gene69832.t1 MTR_8g009050 28.632 468 264 16 7 434 5 442 1.32e-29 120
MS.gene69832.t1 MTR_8g027870 28.151 476 290 18 5 452 16 467 3.15e-29 120
MS.gene69832.t1 MTR_8g465670 27.101 476 260 18 9 434 8 446 1.25e-27 115
MS.gene69832.t1 MTR_4g485630 25.813 492 298 21 7 457 8 473 1.69e-27 115
MS.gene69832.t1 MTR_8g006730 25.612 449 290 16 8 427 6 439 3.09e-27 114
MS.gene69832.t1 MTR_7g117405 27.021 470 287 18 8 440 12 462 3.77e-27 114
MS.gene69832.t1 MTR_4g485620 26.049 453 291 14 20 443 1 438 5.22e-27 113
MS.gene69832.t1 MTR_7g013220 25.828 453 290 18 8 437 5 434 7.72e-27 112
MS.gene69832.t1 MTR_5g045970 26.882 465 287 16 7 432 15 465 8.01e-27 113
MS.gene69832.t1 MTR_0078s0060 26.582 474 276 18 7 440 5 446 8.40e-27 112
MS.gene69832.t1 MTR_8g008990 27.754 472 265 19 7 434 5 444 9.86e-27 112
MS.gene69832.t1 MTR_0184s0030 36.538 208 109 6 237 425 234 437 1.54e-26 112
MS.gene69832.t1 MTR_3g435310 34.343 198 120 5 256 450 222 412 1.70e-26 111
MS.gene69832.t1 MTR_3g435310 29.861 144 93 5 2 139 12 153 4.16e-14 74.3
MS.gene69832.t1 MTR_7g070740 24.646 495 309 15 7 458 10 483 1.83e-26 112
MS.gene69832.t1 MTR_7g070660 24.324 481 323 15 7 457 10 479 1.88e-26 112
MS.gene69832.t1 MTR_6g033625 27.313 454 270 17 9 427 5 433 2.61e-26 111
MS.gene69832.t1 MTR_3g009510 33.180 217 126 4 236 436 241 454 2.97e-26 111
MS.gene69832.t1 MTR_8g012635 34.404 218 122 5 235 435 235 448 3.13e-26 111
MS.gene69832.t1 MTR_7g102460 27.193 456 280 18 5 421 6 448 3.19e-26 111
MS.gene69832.t1 MTR_8g009073 26.778 478 258 20 7 434 5 440 4.61e-26 110
MS.gene69832.t1 MTR_7g102550 25.567 485 307 19 8 452 9 479 8.56e-26 110
MS.gene69832.t1 MTR_7g117170 32.168 286 157 10 199 454 193 471 8.77e-26 110
MS.gene69832.t1 MTR_7g013180 26.027 438 269 17 8 419 5 413 9.05e-26 109
MS.gene69832.t1 MTR_7g102560 25.732 478 287 16 5 436 6 461 1.39e-25 109
MS.gene69832.t1 MTR_8g006710 34.973 183 106 3 257 427 257 438 1.60e-25 108
MS.gene69832.t1 MTR_4g024020 26.350 463 278 18 5 421 6 451 1.74e-25 109
MS.gene69832.t1 MTR_8g012650 33.945 218 123 5 235 435 235 448 1.89e-25 108
MS.gene69832.t1 MTR_0184s0040 35.052 194 112 5 253 436 269 458 2.51e-25 108
MS.gene69832.t1 MTR_0078s0190 35.052 194 112 5 253 436 269 458 2.51e-25 108
MS.gene69832.t1 MTR_6g033615 30.870 230 137 6 216 427 194 419 4.22e-25 107
MS.gene69832.t1 MTR_6g038200 25.490 459 275 20 8 436 11 432 5.27e-25 107
MS.gene69832.t1 MTR_1g019520 35.979 189 106 4 257 434 4 188 5.43e-25 102
MS.gene69832.t1 MTR_8g009073 35.349 215 121 7 234 434 101 311 6.32e-25 105
MS.gene69832.t1 MTR_8g006270 28.014 282 171 7 167 435 178 440 7.05e-25 107
MS.gene69832.t1 MTR_8g466240 26.757 441 238 20 1 398 1 399 7.11e-25 107
MS.gene69832.t1 MTR_8g012730 32.143 252 147 6 198 435 44 285 7.21e-25 104
MS.gene69832.t1 MTR_7g070610 23.944 497 311 15 7 458 12 486 7.39e-25 107
MS.gene69832.t1 MTR_7g055710 24.319 477 297 16 7 440 10 465 7.52e-25 107
MS.gene69832.t1 MTR_6g005600 36.269 193 106 4 255 434 255 443 1.18e-24 106
MS.gene69832.t1 MTR_8g009067 36.170 188 106 5 257 434 139 322 1.74e-24 104
MS.gene69832.t1 MTR_8g006220 26.653 484 260 18 9 434 7 453 2.00e-24 105
MS.gene69832.t1 MTR_8g009067 36.170 188 106 5 257 434 257 440 2.75e-24 105
MS.gene69832.t1 MTR_7g046490 35.417 192 110 4 253 432 250 439 3.00e-24 105
MS.gene69832.t1 MTR_6g038220 24.891 458 286 19 8 440 11 435 3.86e-24 104
MS.gene69832.t1 MTR_7g102490 25.877 456 288 18 5 421 6 450 4.53e-24 105
MS.gene69832.t1 MTR_2g046820 33.621 232 136 7 236 454 236 462 5.71e-24 104
MS.gene69832.t1 MTR_0078s0010 36.458 192 108 5 253 434 254 441 6.00e-24 104
MS.gene69832.t1 MTR_7g102520 26.931 479 286 20 1 432 1 462 6.79e-24 104
MS.gene69832.t1 MTR_8g012630 35.233 193 107 5 257 435 204 392 7.19e-24 103
MS.gene69832.t1 MTR_7g013200 25.658 456 276 18 8 437 5 423 7.87e-24 103
MS.gene69832.t1 MTR_7g070810 26.304 441 290 13 7 421 8 439 8.95e-24 103
MS.gene69832.t1 MTR_8g009063 27.602 442 274 17 7 419 12 436 1.50e-23 103
MS.gene69832.t1 MTR_7g070910 23.014 491 331 13 3 458 6 484 2.21e-23 103
MS.gene69832.t1 MTR_6g033725 32.068 237 139 7 216 434 205 437 2.33e-23 102
MS.gene69832.t1 MTR_7g102450 25.813 461 282 19 8 433 11 446 4.55e-23 102
MS.gene69832.t1 MTR_4g117980 24.625 467 273 17 6 422 9 446 5.03e-23 102
MS.gene69832.t1 MTR_5g035560 25.208 480 293 19 7 456 10 453 5.52e-23 102
MS.gene69832.t1 MTR_1g019510 35.450 189 107 4 257 434 255 439 6.77e-23 101
MS.gene69832.t1 MTR_2g040530 30.224 268 149 9 219 454 203 464 7.94e-23 101
MS.gene69832.t1 MTR_5g035580 28.731 268 157 7 215 458 196 453 8.63e-23 100
MS.gene69832.t1 MTR_4g117950 24.779 452 277 15 6 422 4 427 1.01e-22 100
MS.gene69832.t1 MTR_6g038240 32.308 195 121 6 254 448 261 444 1.13e-22 100
MS.gene69832.t1 MTR_4g128720 26.419 458 279 19 7 440 14 437 1.24e-22 100
MS.gene69832.t1 MTR_5g045960 25.316 474 299 17 7 440 8 466 1.38e-22 100
MS.gene69832.t1 MTR_8g077590 30.072 276 167 6 166 432 184 442 1.47e-22 100
MS.gene69832.t1 MTR_2g046750 34.483 232 134 8 236 454 239 465 1.73e-22 100
MS.gene69832.t1 MTR_5g019580 32.636 239 141 7 236 456 241 477 1.89e-22 100
MS.gene69832.t1 MTR_6g038230 25.581 473 270 20 8 443 11 438 2.04e-22 99.8
MS.gene69832.t1 MTR_5g019580 32.636 239 141 7 236 456 265 501 2.06e-22 100
MS.gene69832.t1 MTR_8g074550 22.764 492 294 18 1 434 1 464 2.34e-22 100
MS.gene69832.t1 MTR_8g012745 30.877 285 161 11 166 435 182 445 2.55e-22 99.8
MS.gene69832.t1 MTR_7g047030 35.417 192 110 5 253 434 254 441 2.59e-22 99.8
MS.gene69832.t1 MTR_7g047270 35.417 192 110 5 253 434 254 441 2.59e-22 99.8
MS.gene69832.t1 MTR_7g071040 23.108 489 333 14 3 458 12 490 3.01e-22 99.8
MS.gene69832.t1 MTR_3g079480 24.950 497 299 22 8 458 21 489 3.22e-22 99.4
MS.gene69832.t1 MTR_0536s0010 26.190 462 257 22 6 422 19 441 5.08e-22 99.0
MS.gene69832.t1 MTR_8g006260 33.333 195 110 7 259 435 263 455 5.43e-22 98.6
MS.gene69832.t1 MTR_3g479520 24.435 487 305 19 8 454 15 478 6.59e-22 98.6
MS.gene69832.t1 MTR_2g034990 23.778 450 298 13 6 422 9 446 8.51e-22 98.2
MS.gene69832.t1 MTR_4g082820 28.040 403 250 14 7 384 6 393 1.04e-21 97.8
MS.gene69832.t1 MTR_5g090610 28.016 257 159 6 206 438 190 444 1.40e-21 97.4
MS.gene69832.t1 MTR_5g098960 25.714 490 283 23 1 449 1 450 1.97e-21 97.1
MS.gene69832.t1 MTR_1g107350 24.249 466 299 19 1 434 1 444 2.02e-21 97.1
MS.gene69832.t1 MTR_7g070800 23.160 462 304 14 7 433 5 450 2.26e-21 97.1
MS.gene69832.t1 MTR_4g082810 27.833 406 249 14 7 384 6 395 2.61e-21 95.9
MS.gene69832.t1 MTR_4g128690 25.219 456 284 18 7 440 14 434 5.59e-21 95.5
MS.gene69832.t1 MTR_7g070930 23.029 482 316 14 1 440 1 469 5.60e-21 95.9
MS.gene69832.t1 MTR_8g008970 33.511 188 111 4 257 434 257 440 6.91e-21 96.3
MS.gene69832.t1 MTR_8g008970 35.366 164 97 4 257 419 596 751 1.67e-16 82.8
MS.gene69832.t1 MTR_3g069690 32.240 183 115 5 253 434 251 425 7.17e-21 95.1
MS.gene69832.t1 MTR_7g070940 24.187 492 306 16 7 458 8 472 8.07e-21 95.1
MS.gene69832.t1 MTR_7g013240 34.146 164 101 5 257 420 250 406 8.53e-21 94.7
MS.gene69832.t1 MTR_5g098930 23.045 486 300 15 7 447 4 460 1.48e-20 94.4
MS.gene69832.t1 MTR_4g117890 25.251 499 293 21 7 456 12 479 1.58e-20 94.4
MS.gene69832.t1 MTR_6g033675 25.110 454 294 17 9 434 5 440 1.95e-20 94.0
MS.gene69832.t1 MTR_0536s0020 25.455 495 286 22 7 450 17 479 2.66e-20 93.6
MS.gene69832.t1 MTR_4g485640 24.719 445 278 17 18 428 219 640 2.95e-20 94.4
MS.gene69832.t1 MTR_5g090700 29.119 261 153 10 206 439 206 461 3.38e-20 93.2
MS.gene69832.t1 MTR_8g044140 25.581 387 238 12 64 416 37 407 3.57e-20 93.2
MS.gene69832.t1 MTR_7g013260 32.086 187 114 7 257 443 251 424 3.94e-20 92.8
MS.gene69832.t1 MTR_3g009490 33.929 168 95 4 282 436 2 166 6.02e-20 87.8
MS.gene69832.t1 MTR_8g083280 30.180 222 138 7 241 456 249 459 6.16e-20 92.4
MS.gene69832.t1 MTR_8g088560 32.323 198 126 6 252 449 259 448 6.17e-20 92.4
MS.gene69832.t1 MTR_5g027210 25.660 265 162 5 212 444 212 473 8.28e-20 92.0
MS.gene69832.t1 MTR_4g008630 27.686 242 160 6 208 437 203 441 9.52e-20 92.0
MS.gene69832.t1 MTR_2g059240 25.118 422 268 12 5 397 10 412 1.02e-19 91.7
MS.gene69832.t1 MTR_5g090620 28.571 245 144 8 224 439 218 460 1.69e-19 91.3
MS.gene69832.t1 MTR_3g084540 28.436 211 139 4 253 456 266 471 1.77e-19 91.3
MS.gene69832.t1 MTR_5g016660 23.077 468 299 16 3 427 5 454 1.80e-19 91.3
MS.gene69832.t1 MTR_5g067170 33.333 189 109 5 253 425 262 449 2.05e-19 90.9
MS.gene69832.t1 MTR_8g083290 33.520 179 112 5 257 434 267 439 2.30e-19 90.9
MS.gene69832.t1 MTR_6g033660 32.609 184 118 4 253 434 260 439 2.87e-19 90.5
MS.gene69832.t1 MTR_0891s0010 28.704 216 136 6 221 427 52 258 3.11e-19 88.2
MS.gene69832.t1 MTR_5g090630 28.958 259 147 10 216 439 194 450 3.81e-19 90.1
MS.gene69832.t1 MTR_5g058320 25.885 452 269 20 5 420 7 428 4.41e-19 89.7
MS.gene69832.t1 MTR_8g064880 24.138 464 262 17 3 412 4 431 6.42e-19 89.4
MS.gene69832.t1 MTR_5g090660 28.077 260 150 9 215 439 200 457 8.07e-19 89.4
MS.gene69832.t1 MTR_3g479610 28.986 207 129 6 257 458 120 313 8.09e-19 87.4
MS.gene69832.t1 MTR_7g080950 31.522 184 115 6 253 436 253 425 1.06e-18 88.6
MS.gene69832.t1 MTR_6g038300 31.148 183 116 5 254 436 261 433 1.17e-18 88.6
MS.gene69832.t1 MTR_3g049970 25.268 467 289 21 3 434 4 445 1.54e-18 88.2
MS.gene69832.t1 MTR_3g084530 30.366 191 120 5 253 436 266 450 1.60e-18 88.2
MS.gene69832.t1 MTR_3g084520 28.571 196 127 5 248 436 261 450 1.76e-18 88.2
MS.gene69832.t1 MTR_1g107315 24.374 439 290 15 1 412 1 424 2.40e-18 87.8
MS.gene69832.t1 MTR_6g013900 25.429 350 214 13 107 427 116 447 2.66e-18 87.4
MS.gene69832.t1 MTR_3g479490 24.942 433 259 20 7 394 5 416 3.00e-18 87.4
MS.gene69832.t1 MTR_5g090670 25.714 280 165 10 216 458 203 476 3.91e-18 87.0
MS.gene69832.t1 MTR_1g107380 28.085 235 147 8 236 456 244 470 4.84e-18 86.7
MS.gene69832.t1 MTR_8g032950 24.183 459 292 19 6 427 10 449 5.38e-18 86.7
MS.gene69832.t1 MTR_0288s0020 23.684 418 266 14 8 395 10 404 9.26e-18 85.9
MS.gene69832.t1 MTR_8g090095 28.226 248 160 7 208 440 217 461 1.04e-17 85.9
MS.gene69832.t1 MTR_7g080940 30.055 183 117 5 254 436 259 430 1.34e-17 85.1
MS.gene69832.t1 MTR_7g012120 30.412 194 119 5 250 428 263 455 1.59e-17 85.1
MS.gene69832.t1 MTR_1g029540 26.337 243 163 6 208 437 199 438 1.69e-17 85.1
MS.gene69832.t1 MTR_3g008010 24.726 457 286 17 8 425 10 447 1.99e-17 84.7
MS.gene69832.t1 MTR_1g107360 30.392 204 130 5 232 434 245 437 2.13e-17 84.7
MS.gene69832.t1 MTR_6g035185 22.766 470 300 16 6 433 9 457 2.18e-17 84.7
MS.gene69832.t1 MTR_6g035265 22.500 480 280 19 6 433 9 448 2.77e-17 84.3
MS.gene69832.t1 MTR_4g094920 28.774 212 139 8 253 458 275 480 2.89e-17 84.3
MS.gene69832.t1 MTR_6g014270 23.028 469 308 16 2 434 3 454 3.16e-17 84.3
MS.gene69832.t1 MTR_2g035040 29.381 194 118 5 257 436 173 361 3.70e-17 83.6
MS.gene69832.t1 MTR_5g040030 26.336 262 164 8 196 433 206 462 3.75e-17 84.0
MS.gene69832.t1 MTR_5g029800 31.319 182 110 4 250 417 257 437 4.64e-17 84.0
MS.gene69832.t1 MTR_7g080935 29.508 183 118 5 254 436 259 430 4.76e-17 83.6
MS.gene69832.t1 MTR_4g117960 23.896 498 316 20 1 458 6 480 4.90e-17 83.6
MS.gene69832.t1 MTR_4g108250 22.400 500 318 15 7 458 10 487 5.66e-17 83.6
MS.gene69832.t1 MTR_8g056740 26.293 232 157 5 210 431 111 338 6.01e-17 82.8
MS.gene69832.t1 MTR_6g014220 23.922 464 296 15 8 434 10 453 7.43e-17 83.2
MS.gene69832.t1 MTR_4g095008 30.178 169 111 5 253 417 260 425 1.12e-16 82.8
MS.gene69832.t1 MTR_7g070780 29.592 196 125 5 255 440 273 465 1.18e-16 82.4
MS.gene69832.t1 MTR_7g070860 21.909 461 297 14 7 433 6 437 1.19e-16 82.4
MS.gene69832.t1 MTR_7g470610 34.722 144 90 3 253 394 128 269 1.20e-16 80.5
MS.gene69832.t1 MTR_7g070583 34.722 144 90 3 253 394 128 269 1.20e-16 80.5
MS.gene69832.t1 MTR_4g118000 23.831 449 273 17 6 417 10 426 1.23e-16 82.4
MS.gene69832.t1 MTR_6g014170 24.183 459 309 15 8 446 10 449 1.27e-16 82.4
MS.gene69832.t1 MTR_5g090580 25.940 266 165 8 206 444 204 464 1.42e-16 82.4
MS.gene69832.t1 MTR_6g013990 26.271 236 150 8 212 434 229 453 1.48e-16 82.0
MS.gene69832.t1 MTR_6g014020 29.670 182 118 5 253 434 284 455 1.85e-16 82.0
MS.gene69832.t1 MTR_6g013960 22.196 419 290 11 8 395 10 423 2.32e-16 81.6
MS.gene69832.t1 MTR_7g071050 22.979 470 290 17 7 455 12 430 2.35e-16 81.3
MS.gene69832.t1 MTR_6g013920 24.709 344 209 13 131 436 140 471 2.66e-16 81.3
MS.gene69832.t1 MTR_7g070870 23.716 409 280 13 4 394 15 409 3.79e-16 80.9
MS.gene69832.t1 MTR_5g072810 22.321 448 297 17 8 434 12 429 4.25e-16 80.5
MS.gene69832.t1 MTR_5g072860 22.857 455 292 16 8 434 18 441 4.94e-16 80.5
MS.gene69832.t1 MTR_6g013450 23.126 467 306 16 5 429 7 462 5.22e-16 80.5
MS.gene69832.t1 MTR_3g069710 28.936 235 150 7 208 434 202 427 5.82e-16 80.1
MS.gene69832.t1 MTR_5g070040 30.932 236 141 10 205 427 216 442 7.99e-16 79.7
MS.gene69832.t1 MTR_2g035020 30.556 180 110 4 257 422 268 446 8.47e-16 80.1
MS.gene69832.t1 MTR_8g064870 32.353 170 107 5 253 416 266 433 1.11e-15 79.3
MS.gene69832.t1 MTR_6g014250 28.646 192 123 6 257 446 286 465 1.37e-15 79.3
MS.gene69832.t1 MTR_2g008210 31.818 176 111 6 253 427 278 445 1.54e-15 79.0
MS.gene69832.t1 MTR_5g072820 24.107 448 286 18 8 434 10 424 1.76e-15 78.6
MS.gene69832.t1 MTR_6g014200 29.121 182 119 5 253 434 281 452 2.31e-15 78.6
MS.gene69832.t1 MTR_6g011340 22.897 428 288 14 8 401 10 429 2.47e-15 78.6
MS.gene69832.t1 MTR_0036s0220 23.465 456 293 20 8 428 12 446 2.71e-15 78.2
MS.gene69832.t1 MTR_7g011470 23.427 461 286 12 8 434 10 437 3.08e-15 78.2
MS.gene69832.t1 MTR_3g479470 24.186 430 265 20 8 395 13 423 3.33e-15 78.2
MS.gene69832.t1 MTR_6g014190 29.891 184 115 6 253 434 91 262 3.67e-15 76.3
MS.gene69832.t1 MTR_7g011470 23.620 453 299 12 8 434 10 441 4.05e-15 77.8
MS.gene69832.t1 MTR_8g059425 27.801 241 144 11 210 434 227 453 4.75e-15 77.4
MS.gene69832.t1 MTR_3g031400 27.273 187 117 4 252 434 254 425 4.81e-15 77.4
MS.gene69832.t1 MTR_1g107375 30.256 195 124 5 240 434 247 429 5.74e-15 77.0
MS.gene69832.t1 MTR_8g007585 29.213 178 116 5 257 434 200 367 5.99e-15 76.6
MS.gene69832.t1 MTR_3g031450 26.457 223 134 6 220 427 213 420 6.92e-15 77.0
MS.gene69832.t1 MTR_5g016480 34.234 111 71 2 252 361 268 377 7.59e-15 77.0
MS.gene69832.t1 MTR_1g040310 22.687 454 282 17 7 416 14 442 8.55e-15 77.0
MS.gene69832.t1 MTR_6g014240 28.022 182 121 5 253 434 251 422 2.67e-14 75.1
MS.gene69832.t1 MTR_1g107365 29.480 173 111 4 240 412 286 447 4.09e-14 74.7
MS.gene69832.t1 MTR_5g464810 23.904 456 289 17 8 427 12 445 4.92e-14 74.3
MS.gene69832.t1 MTR_5g064240 23.904 456 289 17 8 427 12 445 4.92e-14 74.3
MS.gene69832.t1 MTR_6g014310 28.333 180 115 6 257 434 289 456 8.06e-14 73.9
MS.gene69832.t1 MTR_5g004940 34.188 117 75 2 257 372 197 312 1.71e-13 72.4
MS.gene69832.t1 MTR_5g072840 22.247 445 298 15 8 434 10 424 1.93e-13 72.4
MS.gene69832.t1 MTR_5g072830 22.545 448 293 16 8 434 10 424 2.39e-13 72.0
MS.gene69832.t1 MTR_6g014050 29.121 182 115 6 255 434 287 456 3.93e-13 71.6
MS.gene69832.t1 MTR_6g014150 29.371 143 98 3 253 395 281 420 4.35e-13 71.6
MS.gene69832.t1 MTR_1g107285 30.120 166 105 4 249 412 263 419 1.13e-12 70.1
MS.gene69832.t1 MTR_6g014290 30.496 141 91 4 257 395 286 421 2.22e-12 69.3
MS.gene69832.t1 MTR_8g009840 39.048 105 62 2 315 419 388 490 2.28e-12 69.3
MS.gene69832.t1 MTR_7g039550 26.991 226 136 7 220 421 5 225 3.39e-12 67.0
MS.gene69832.t1 MTR_7g080900 27.174 184 124 5 257 440 264 437 5.81e-12 67.8
MS.gene69832.t1 MTR_6g014040 27.957 186 116 6 253 434 285 456 7.21e-12 67.8
MS.gene69832.t1 MTR_5g031860 28.966 145 97 4 252 395 275 414 3.81e-11 65.5
MS.gene69832.t1 MTR_2086s0010 26.846 149 100 4 279 427 1 140 3.93e-11 62.0
MS.gene69832.t1 MTR_1996s0010 26.846 149 100 4 279 427 1 140 3.93e-11 62.0
MS.gene69832.t1 MTR_6g078320 29.000 200 122 7 236 420 252 446 4.05e-11 65.5
MS.gene69832.t1 MTR_0536s0030 31.343 134 79 4 309 432 194 324 8.20e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69832.t1 AT5G54010 45.475 453 236 6 7 458 5 447 1.78e-143 418
MS.gene69832.t1 AT5G53990 45.033 453 232 5 7 458 5 441 8.64e-142 414
MS.gene69832.t1 AT4G27570 43.640 456 239 7 7 458 6 447 5.29e-140 409
MS.gene69832.t1 AT4G27560 43.640 456 239 7 7 458 6 447 8.28e-139 406
MS.gene69832.t1 AT1G64920 43.982 457 235 6 7 458 5 445 5.62e-137 402
MS.gene69832.t1 AT4G09500 43.516 455 240 8 5 458 3 441 1.07e-135 398
MS.gene69832.t1 AT2G22930 44.396 455 236 6 5 458 3 441 2.07e-134 395
MS.gene69832.t1 AT1G64910 43.488 453 239 5 7 458 5 441 1.72e-133 392
MS.gene69832.t1 AT5G54060 44.035 461 243 8 7 458 12 466 2.84e-132 390
MS.gene69832.t1 AT3G29630 43.459 451 237 5 7 454 5 440 3.65e-132 389
MS.gene69832.t1 AT3G29630 43.080 448 217 6 7 454 5 414 1.34e-125 371
MS.gene69832.t1 AT4G09500 41.850 454 224 9 5 458 3 416 4.81e-123 365
MS.gene69832.t1 AT1G50580 42.163 453 238 7 7 454 5 438 5.98e-122 363
MS.gene69832.t1 AT2G22590 33.405 464 282 17 7 454 14 466 5.34e-65 217
MS.gene69832.t1 AT5G65550 30.388 464 299 15 5 454 6 459 6.86e-65 216
MS.gene69832.t1 AT5G49690 31.429 455 289 11 7 452 9 449 2.76e-63 212
MS.gene69832.t1 AT2G22930 39.726 219 118 3 5 223 3 207 3.37e-48 167
MS.gene69832.t1 AT2G22930 36.190 105 62 3 357 458 187 289 2.09e-13 70.9
MS.gene69832.t1 AT5G03490 27.902 448 284 13 2 434 14 437 1.06e-37 143
MS.gene69832.t1 AT1G51210 27.928 444 271 16 8 433 20 432 5.36e-35 135
MS.gene69832.t1 AT4G34131 27.932 469 280 17 1 428 1 452 8.90e-34 132
MS.gene69832.t1 AT5G12890 27.403 489 276 20 4 443 6 464 2.97e-33 131
MS.gene69832.t1 AT2G15480 27.646 463 290 16 7 434 9 461 7.72e-32 127
MS.gene69832.t1 AT4G36770 27.948 458 281 18 7 435 3 440 7.87e-32 127
MS.gene69832.t1 AT1G73880 27.488 422 261 16 2 397 8 410 8.02e-32 127
MS.gene69832.t1 AT2G15490 27.826 460 285 18 7 430 6 454 3.95e-31 125
MS.gene69832.t1 AT2G15480 27.152 453 290 14 7 428 9 452 4.19e-31 125
MS.gene69832.t1 AT2G15490 27.790 457 286 17 7 430 6 451 4.64e-31 125
MS.gene69832.t1 AT4G34135 27.790 457 258 19 7 416 10 441 3.74e-30 122
MS.gene69832.t1 AT1G05675 27.434 452 274 16 8 434 6 428 7.81e-30 121
MS.gene69832.t1 AT2G31750 25.885 452 285 15 8 436 8 432 6.31e-29 119
MS.gene69832.t1 AT2G18570 25.054 459 302 14 1 434 1 442 9.04e-29 118
MS.gene69832.t1 AT2G31750 25.708 459 291 15 1 436 1 432 1.05e-28 118
MS.gene69832.t1 AT2G36750 28.322 459 271 20 5 422 7 448 1.62e-28 118
MS.gene69832.t1 AT1G10400 25.732 478 304 19 7 452 6 464 2.13e-28 117
MS.gene69832.t1 AT2G36770 27.451 459 289 18 5 427 11 461 3.37e-28 117
MS.gene69832.t1 AT2G16890 26.457 446 287 18 8 429 9 437 6.35e-28 116
MS.gene69832.t1 AT2G36800 27.115 461 287 17 6 427 10 460 1.13e-27 115
MS.gene69832.t1 AT3G53150 27.331 472 279 18 7 427 21 479 1.59e-27 115
MS.gene69832.t1 AT2G31790 25.673 483 293 17 8 458 8 456 2.00e-27 114
MS.gene69832.t1 AT2G36760 27.511 458 275 17 5 421 11 452 2.37e-27 114
MS.gene69832.t1 AT1G05680 26.549 452 278 17 8 434 6 428 4.06e-27 113
MS.gene69832.t1 AT4G34138 25.101 494 303 15 7 458 10 478 6.63e-27 113
MS.gene69832.t1 AT1G01420 26.722 479 265 18 8 439 11 450 1.15e-25 109
MS.gene69832.t1 AT1G01420 26.582 474 272 17 8 439 8 447 1.18e-25 109
MS.gene69832.t1 AT4G01070 35.780 218 122 6 236 439 235 448 1.41e-25 109
MS.gene69832.t1 AT2G43820 24.947 473 282 18 8 449 7 437 1.81e-25 108
MS.gene69832.t1 AT2G16890 26.107 429 278 17 8 412 9 422 3.15e-25 107
MS.gene69832.t1 AT3G53160 24.946 461 303 17 1 427 1 452 1.65e-24 106
MS.gene69832.t1 AT5G14860 25.918 463 277 17 8 429 8 445 1.96e-24 106
MS.gene69832.t1 AT2G18560 29.439 214 142 2 229 434 140 352 4.83e-24 103
MS.gene69832.t1 AT3G50740 24.792 480 272 17 8 435 7 449 6.40e-24 104
MS.gene69832.t1 AT2G36790 25.424 472 288 19 2 427 7 460 2.90e-22 99.8
MS.gene69832.t1 AT2G30150 23.529 476 318 19 4 458 6 456 9.56e-22 97.8
MS.gene69832.t1 AT2G43840 23.729 472 287 17 8 448 7 436 1.64e-21 97.1
MS.gene69832.t1 AT2G29730 26.174 447 284 15 7 425 4 432 3.03e-21 96.3
MS.gene69832.t1 AT2G43840 32.632 190 118 4 259 448 257 436 3.63e-21 95.9
MS.gene69832.t1 AT4G15260 29.954 217 133 5 257 456 142 356 3.65e-21 95.1
MS.gene69832.t1 AT2G36780 37.173 191 106 6 250 427 272 461 3.80e-21 96.3
MS.gene69832.t1 AT2G36970 28.270 237 150 6 214 437 220 449 7.76e-21 95.5
MS.gene69832.t1 AT2G30140 24.528 477 309 19 2 456 5 452 1.09e-20 94.7
MS.gene69832.t1 AT5G66690 23.904 456 299 14 8 435 7 442 1.30e-20 94.7
MS.gene69832.t1 AT2G30140 24.313 473 316 17 2 456 5 453 1.52e-20 94.4
MS.gene69832.t1 AT4G15280 30.556 216 132 4 257 456 294 507 1.74e-20 94.4
MS.gene69832.t1 AT4G15280 30.556 216 132 4 257 456 262 475 2.02e-20 94.0
MS.gene69832.t1 AT3G21800 30.233 215 131 4 257 454 263 475 3.32e-20 93.6
MS.gene69832.t1 AT2G30150 23.276 464 313 18 13 458 2 440 3.52e-20 93.2
MS.gene69832.t1 AT4G15550 22.727 484 326 15 2 456 7 471 5.09e-20 92.8
MS.gene69832.t1 AT3G21790 28.253 269 158 7 219 454 212 478 5.61e-20 92.8
MS.gene69832.t1 AT1G24100 22.407 482 309 14 8 458 11 458 1.11e-19 91.7
MS.gene69832.t1 AT3G21760 29.907 214 132 5 257 454 269 480 1.73e-19 91.3
MS.gene69832.t1 AT1G07250 28.571 231 153 5 236 456 246 474 1.87e-19 91.3
MS.gene69832.t1 AT3G21780 29.630 216 134 5 257 456 257 470 2.46e-19 90.9
MS.gene69832.t1 AT3G22250 34.158 202 103 9 257 450 274 453 2.79e-19 90.5
MS.gene69832.t1 AT1G07260 29.694 229 149 6 236 454 245 471 4.95e-19 89.7
MS.gene69832.t1 AT5G05870 29.339 242 155 7 206 440 204 436 4.98e-19 89.7
MS.gene69832.t1 AT3G21750 28.216 241 151 5 236 456 232 470 5.80e-19 89.7
MS.gene69832.t1 AT5G59580 25.212 472 295 19 8 454 9 447 6.25e-19 89.4
MS.gene69832.t1 AT5G26310 29.767 215 131 4 236 435 233 442 7.97e-19 89.4
MS.gene69832.t1 AT1G01390 26.226 469 281 21 8 439 8 448 8.23e-19 89.4
MS.gene69832.t1 AT1G01390 26.226 469 281 21 8 439 25 465 9.21e-19 89.0
MS.gene69832.t1 AT5G59590 29.730 259 164 10 205 454 200 449 1.78e-18 87.8
MS.gene69832.t1 AT4G15480 32.065 184 118 6 254 434 275 454 2.30e-18 87.8
MS.gene69832.t1 AT2G23250 24.312 436 277 14 18 432 8 411 2.55e-18 87.4
MS.gene69832.t1 AT1G06000 25.301 415 232 16 8 394 10 374 3.39e-18 87.0
MS.gene69832.t1 AT2G29710 33.898 177 100 6 257 425 265 432 5.48e-18 86.7
MS.gene69832.t1 AT4G15500 31.111 180 114 6 257 434 267 438 1.14e-17 85.5
MS.gene69832.t1 AT3G55700 28.514 249 158 7 206 445 203 440 2.46e-17 84.7
MS.gene69832.t1 AT2G29740 32.500 200 125 6 236 427 250 447 2.65e-17 84.7
MS.gene69832.t1 AT3G16520 30.412 194 124 4 257 446 261 447 2.66e-17 84.3
MS.gene69832.t1 AT3G16520 32.530 166 106 3 257 418 261 424 3.16e-17 84.3
MS.gene69832.t1 AT1G07240 30.702 228 146 7 236 454 251 475 3.37e-17 84.3
MS.gene69832.t1 AT3G16520 32.530 166 106 3 257 418 261 424 3.40e-17 84.0
MS.gene69832.t1 AT3G46700 23.009 452 300 15 8 445 9 426 3.45e-17 84.0
MS.gene69832.t1 AT3G21560 28.922 204 131 7 257 454 277 472 5.68e-17 83.6
MS.gene69832.t1 AT3G55710 35.000 140 86 4 259 396 263 399 6.34e-17 83.2
MS.gene69832.t1 AT1G05530 26.531 245 156 6 222 448 206 444 2.03e-16 81.6
MS.gene69832.t1 AT4G14090 29.648 199 129 7 253 448 255 445 2.31e-16 81.6
MS.gene69832.t1 AT4G15490 27.933 179 121 5 257 434 271 442 2.43e-16 81.6
MS.gene69832.t1 AT3G11340 25.057 435 279 17 9 427 10 413 2.79e-16 81.3
MS.gene69832.t1 AT1G05560 28.700 223 138 6 241 448 275 491 4.17e-16 80.9
MS.gene69832.t1 AT1G05560 28.251 223 139 6 241 448 225 441 4.45e-16 80.9
MS.gene69832.t1 AT5G05860 24.222 450 297 16 7 440 8 429 5.27e-16 80.5
MS.gene69832.t1 AT5G05890 28.755 233 151 8 207 432 204 428 8.44e-16 79.7
MS.gene69832.t1 AT3G46690 28.745 247 160 8 202 440 196 434 1.33e-15 79.3
MS.gene69832.t1 AT5G38040 25.217 460 295 19 16 454 18 449 1.36e-15 79.3
MS.gene69832.t1 AT2G23260 22.368 456 291 16 8 435 10 430 1.47e-15 79.0
MS.gene69832.t1 AT2G28080 25.417 240 157 7 214 435 220 455 2.79e-15 78.2
MS.gene69832.t1 AT5G17050 27.826 230 146 9 210 434 218 432 7.55e-15 77.0
MS.gene69832.t1 AT1G22360 22.747 466 302 17 8 436 10 454 1.06e-14 76.6
MS.gene69832.t1 AT1G78270 29.570 186 118 6 253 436 283 457 1.34e-14 76.3
MS.gene69832.t1 AT3G02100 30.108 186 107 6 257 440 277 441 1.71e-14 75.9
MS.gene69832.t1 AT1G22400 30.857 175 111 5 253 427 285 449 5.87e-14 74.3
MS.gene69832.t1 AT1G22360 22.642 424 277 15 8 394 10 419 1.58e-12 69.7
MS.gene69832.t1 AT5G38010 29.317 249 151 10 204 445 205 435 1.84e-12 69.3
MS.gene69832.t1 AT5G05900 25.410 244 160 9 207 436 205 440 2.51e-12 68.9
MS.gene69832.t1 AT2G26480 27.039 233 148 8 221 445 209 427 2.60e-12 68.9
MS.gene69832.t1 AT1G22340 25.543 184 128 4 253 436 284 458 5.04e-12 68.2
MS.gene69832.t1 AT1G22380 28.261 184 122 5 253 436 284 457 6.89e-12 67.8
MS.gene69832.t1 AT3G46720 29.070 172 109 4 257 428 254 412 7.57e-12 67.4

Find 82 sgRNAs with CRISPR-Local

Find 99 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTAAACCTGTTCTGCTTTC+AGG 0.094372 2.2:+13950223 MS.gene69832:CDS
AAAGGAAAAGGGATTGTTTA+TGG 0.213084 2.2:+13950493 MS.gene69832:CDS
TCCCACAGAAAACTAGAATT+TGG 0.233485 2.2:+13950082 MS.gene69832:CDS
AAATGGTTAAAATGGCTTAA+AGG 0.265256 2.2:+13950286 MS.gene69832:CDS
CCAAGGTAAGCTGATGATAT+TGG 0.272835 2.2:-13949941 None:intergenic
GGGTTTAATGAAAGAGTTAA+AGG 0.280728 2.2:+13950475 MS.gene69832:CDS
AAAGTCTTCAATACTTGATA+TGG 0.289217 2.2:+13949915 MS.gene69832:CDS
ATCACAGTTCCTCATGTTAA+TGG 0.297077 2.2:+13949713 MS.gene69832:CDS
TCATTCTTGCATTCATGATA+TGG 0.306881 2.2:-13950651 None:intergenic
ACTCTTTCATTAAACCCTTC+TGG 0.311494 2.2:-13950469 None:intergenic
AAGGGATTGTTTATGGAAGT+TGG 0.335805 2.2:+13950500 MS.gene69832:CDS
GATCTCATGAAACCACCTTC+AGG 0.343673 2.2:+13950007 MS.gene69832:CDS
TTGCTTGGTCTTGAATTAAC+AGG 0.345544 2.2:+13950385 MS.gene69832:CDS
ACCTCTTAATGCTAATTTGT+TGG 0.362141 2.2:-13949603 None:intergenic
GCCACTAAAAGCTACATTAG+AGG 0.374293 2.2:+13950261 MS.gene69832:CDS
TTTAGTGGCTCAGGTAATAT+AGG 0.376028 2.2:-13950247 None:intergenic
GCAGCACTTAAGCCACCTAT+TGG 0.380205 2.2:+13950421 MS.gene69832:CDS
AATGAAAGAGTTAAAGGAAA+AGG 0.381937 2.2:+13950481 MS.gene69832:CDS
GGCTTAAGTGCTGCAAGAAA+TGG 0.387827 2.2:-13950412 None:intergenic
ATGAAAGAGTTAAAGGAAAA+GGG 0.388208 2.2:+13950482 MS.gene69832:CDS
TTCATGCGAATAAAACTTGA+TGG 0.390577 2.2:-13950044 None:intergenic
TTACACGATCGCTCTGACAT+AGG 0.396357 2.2:+13950118 MS.gene69832:CDS
TCAATTGACTCAAATCCAAT+AGG 0.400322 2.2:-13950436 None:intergenic
ATAAAACTTGATGGATGAAT+CGG 0.401228 2.2:-13950035 None:intergenic
AAAGGATGCAGAGAAATTGA+TGG 0.417369 2.2:+13950169 MS.gene69832:CDS
CAGTTTCAAGCGTTGTTGCT+TGG 0.420003 2.2:+13950370 MS.gene69832:CDS
AAATCAAAGAAAACTATTTG+TGG 0.424765 2.2:-13949851 None:intergenic
TCTGTGGTTTATTGTGCATA+TGG 0.439244 2.2:+13950322 MS.gene69832:CDS
TTAACATGAGGAACTGTGAT+AGG 0.442956 2.2:-13949710 None:intergenic
ATCCTTCTCTGTTTGATCCA+TGG 0.445386 2.2:-13949801 None:intergenic
ATCTCATGAAACCACCTTCA+GGG 0.449830 2.2:+13950008 MS.gene69832:CDS
AGGTAATAAGATTTGGATGA+AGG 0.452133 2.2:-13949682 None:intergenic
ATGGATGATGAGAATGAAGT+TGG 0.453273 2.2:+13950769 MS.gene69832:CDS
AATGTTTCCATGGTTTGCTA+TGG 0.456397 2.2:+13949553 MS.gene69832:CDS
AATAAGAGGGAATAAAGAAG+AGG 0.457847 2.2:-13949771 None:intergenic
GGATATTGAACTTCTTATAG+AGG 0.458352 2.2:+13949820 MS.gene69832:CDS
TAAAACTTGATGGATGAATC+GGG 0.461296 2.2:-13950034 None:intergenic
ATAGGACCTGAAAGCAGAAC+AGG 0.461457 2.2:-13950229 None:intergenic
TCCATGGCTGTAGCAATAAG+AGG 0.461979 2.2:-13949785 None:intergenic
TTGTTGGAGAGACTGAGAAA+TGG 0.462308 2.2:-13949587 None:intergenic
AATCTTCCTTGACTTTGTCT+TGG 0.463810 2.2:-13949971 None:intergenic
TCCAACAAATTAGCATTAAG+AGG 0.464701 2.2:+13949602 MS.gene69832:CDS
CTTGCATTCATGATATGGTC+AGG 0.468145 2.2:-13950646 None:intergenic
GTTGAGAAAGGTGATGAAGA+TGG 0.473698 2.2:+13950703 MS.gene69832:CDS
CCCTCTTATTGCTACAGCCA+TGG 0.480560 2.2:+13949784 MS.gene69832:CDS
TTGAAGAAGCTTTACCAGAA+GGG 0.482277 2.2:+13950455 MS.gene69832:CDS
AATGATGAGTGAAAAGTTGA+AGG 0.501876 2.2:+13950669 MS.gene69832:CDS
ATGTTTCCATGGTTTGCTAT+GGG 0.504571 2.2:+13949554 MS.gene69832:CDS
TGCACATAGCAATGTTTCCA+TGG 0.504753 2.2:+13949543 MS.gene69832:CDS
TCAGATGCAGTTGCTTTCAA+AGG 0.514738 2.2:+13950151 MS.gene69832:CDS
CCAATATCATCAGCTTACCT+TGG 0.525225 2.2:+13949941 MS.gene69832:CDS
TTTGTCTTGGTATATTTCCA+AGG 0.526461 2.2:-13949958 None:intergenic
ATTGAAGAAGCTTTACCAGA+AGG 0.553775 2.2:+13950454 MS.gene69832:CDS
GTTGGTGTAGAAGTTGAGAA+AGG 0.554703 2.2:+13950691 MS.gene69832:CDS
AGGATTCAAACCTGGTTCTG+TGG 0.559933 2.2:+13950306 MS.gene69832:CDS
TGGAGCTGCTTCTATAACTG+AGG 0.562901 2.2:+13950579 MS.gene69832:CDS
AGAAAACTAGAATTTGGAAG+TGG 0.563912 2.2:+13950088 MS.gene69832:CDS
TATTGTGCATATGGAAGTGA+AGG 0.565062 2.2:+13950331 MS.gene69832:CDS
ATTGCTATGTGCAAAGGAGG+AGG 0.570238 2.2:-13949533 None:intergenic
GCACAATAAACCACAGAACC+AGG 0.572498 2.2:-13950316 None:intergenic
TGGCTTAAAGGATTCAAACC+TGG 0.583848 2.2:+13950298 MS.gene69832:CDS
GATGAATCGGGGAACCCTGA+AGG 0.591247 2.2:-13950022 None:intergenic
ATGAGTGAAAAGTTGAAGGT+TGG 0.593081 2.2:+13950673 MS.gene69832:CDS
AACATTGCTATGTGCAAAGG+AGG 0.593375 2.2:-13949536 None:intergenic
ATTGACTCAAATCCAATAGG+TGG 0.595901 2.2:-13950433 None:intergenic
CAAAGGAGGAGGAGAATCCA+TGG 0.596316 2.2:-13949522 None:intergenic
ATAAGAGGGAATAAAGAAGA+GGG 0.597196 2.2:-13949770 None:intergenic
GGAAACATTGCTATGTGCAA+AGG 0.601320 2.2:-13949539 None:intergenic
ACTTGTTAACACGTGTCAGT+TGG 0.603876 2.2:+13950603 MS.gene69832:CDS
AGCCATGGATCAAACAGAGA+AGG 0.627128 2.2:+13949799 MS.gene69832:CDS
GTTATGAAACATCCAACAGA+AGG 0.628836 2.2:-13950550 None:intergenic
CCATGGCTGTAGCAATAAGA+GGG 0.634014 2.2:-13949784 None:intergenic
AATATACCAAGACAAAGTCA+AGG 0.642666 2.2:+13949965 MS.gene69832:CDS
GAATCGGGGAACCCTGAAGG+TGG 0.645467 2.2:-13950019 None:intergenic
GGAGCTGCTTCTATAACTGA+GGG 0.647559 2.2:+13950580 MS.gene69832:CDS
CAAAGCTGTGAAGATTGTGA+TGG 0.655994 2.2:+13950750 MS.gene69832:CDS
AAGTGTCCCATAGCAAACCA+TGG 0.661811 2.2:-13949560 None:intergenic
GATGTAGTTTCAGCATCATG+AGG 0.664384 2.2:-13949740 None:intergenic
AAAACTTGATGGATGAATCG+GGG 0.668840 2.2:-13950033 None:intergenic
TGAGGAAGACCATTAACATG+AGG 0.685206 2.2:-13949722 None:intergenic
ATATGGTCAGGATCTACACG+TGG 0.742139 2.2:-13950634 None:intergenic
GGATGTTTCATAACACACTG+TGG 0.766209 2.2:+13950559 MS.gene69832:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTCTTTGATTTTCAATAT+TGG + chr2.2:13949861-13949880 MS.gene69832:CDS 15.0%
!! AAATCAAAGAAAACTATTTG+TGG - chr2.2:13949854-13949873 None:intergenic 20.0%
!!! AATTATCTTCAAACTGTTTT+TGG + chr2.2:13950202-13950221 MS.gene69832:CDS 20.0%
!!! TGAAACTGATTTTTTTCTAA+TGG - chr2.2:13950358-13950377 None:intergenic 20.0%
! AAAGTCTTCAATACTTGATA+TGG + chr2.2:13949915-13949934 MS.gene69832:CDS 25.0%
! AAATGGTTAAAATGGCTTAA+AGG + chr2.2:13950286-13950305 MS.gene69832:CDS 25.0%
! AATGAAAGAGTTAAAGGAAA+AGG + chr2.2:13950481-13950500 MS.gene69832:CDS 25.0%
! ATGAAAGAGTTAAAGGAAAA+GGG + chr2.2:13950482-13950501 MS.gene69832:CDS 25.0%
! GGAAAAAAGGTAATAAGATT+TGG - chr2.2:13949692-13949711 None:intergenic 25.0%
! TAGAGGAAAAATGGTTAAAA+TGG + chr2.2:13950278-13950297 MS.gene69832:CDS 25.0%
!! ATAAAACTTGATGGATGAAT+CGG - chr2.2:13950038-13950057 None:intergenic 25.0%
!!! AATTTGTTGAGTGTGTTTTT+AGG - chr2.2:13949650-13949669 None:intergenic 25.0%
!!! ATTTGTTGAGTGTGTTTTTA+GGG - chr2.2:13949649-13949668 None:intergenic 25.0%
AAAGGAAAAGGGATTGTTTA+TGG + chr2.2:13950493-13950512 MS.gene69832:CDS 30.0%
AAGCTACATTAGAGGAAAAA+TGG + chr2.2:13950269-13950288 MS.gene69832:CDS 30.0%
AATAAGAGGGAATAAAGAAG+AGG - chr2.2:13949774-13949793 None:intergenic 30.0%
AATATACCAAGACAAAGTCA+AGG + chr2.2:13949965-13949984 MS.gene69832:CDS 30.0%
AATGATGAGTGAAAAGTTGA+AGG + chr2.2:13950669-13950688 MS.gene69832:CDS 30.0%
AGAAAACTAGAATTTGGAAG+TGG + chr2.2:13950088-13950107 MS.gene69832:CDS 30.0%
AGGTAATAAGATTTGGATGA+AGG - chr2.2:13949685-13949704 None:intergenic 30.0%
ATAAGAGGGAATAAAGAAGA+GGG - chr2.2:13949773-13949792 None:intergenic 30.0%
GGATATTGAACTTCTTATAG+AGG + chr2.2:13949820-13949839 MS.gene69832:CDS 30.0%
GGGTTTAATGAAAGAGTTAA+AGG + chr2.2:13950475-13950494 MS.gene69832:CDS 30.0%
TCATTCTTGCATTCATGATA+TGG - chr2.2:13950654-13950673 None:intergenic 30.0%
TCCAACAAATTAGCATTAAG+AGG + chr2.2:13949602-13949621 MS.gene69832:CDS 30.0%
TTCATGCGAATAAAACTTGA+TGG - chr2.2:13950047-13950066 None:intergenic 30.0%
TTTGTCTTGGTATATTTCCA+AGG - chr2.2:13949961-13949980 None:intergenic 30.0%
! ACCTCTTAATGCTAATTTGT+TGG - chr2.2:13949606-13949625 None:intergenic 30.0%
! TAAAACTTGATGGATGAATC+GGG - chr2.2:13950037-13950056 None:intergenic 30.0%
! TCAATTGACTCAAATCCAAT+AGG - chr2.2:13950439-13950458 None:intergenic 30.0%
!!! ATTTTAGAACATCCTTCTGT+TGG + chr2.2:13950538-13950557 MS.gene69832:CDS 30.0%
!!! TCCAAATTCTAGTTTTCTGT+GGG - chr2.2:13950086-13950105 None:intergenic 30.0%
!!! TTCCAAATTCTAGTTTTCTG+TGG - chr2.2:13950087-13950106 None:intergenic 30.0%
AAAGGATGCAGAGAAATTGA+TGG + chr2.2:13950169-13950188 MS.gene69832:CDS 35.0%
AAGGGATTGTTTATGGAAGT+TGG + chr2.2:13950500-13950519 MS.gene69832:CDS 35.0%
AATCTTCCTTGACTTTGTCT+TGG - chr2.2:13949974-13949993 None:intergenic 35.0%
ACTCTTTCATTAAACCCTTC+TGG - chr2.2:13950472-13950491 None:intergenic 35.0%
AGGAACTGTGATAGGAAAAA+AGG - chr2.2:13949705-13949724 None:intergenic 35.0%
ATCACAGTTCCTCATGTTAA+TGG + chr2.2:13949713-13949732 MS.gene69832:CDS 35.0%
ATGAGTGAAAAGTTGAAGGT+TGG + chr2.2:13950673-13950692 MS.gene69832:CDS 35.0%
ATGGATGATGAGAATGAAGT+TGG + chr2.2:13950769-13950788 MS.gene69832:CDS 35.0%
ATTGAAGAAGCTTTACCAGA+AGG + chr2.2:13950454-13950473 MS.gene69832:CDS 35.0%
CCAAACTTGACTCAAAAACT+TGG + chr2.2:13949887-13949906 MS.gene69832:CDS 35.0%
GTTATGAAACATCCAACAGA+AGG - chr2.2:13950553-13950572 None:intergenic 35.0%
TATTGTGCATATGGAAGTGA+AGG + chr2.2:13950331-13950350 MS.gene69832:CDS 35.0%
TCCCACAGAAAACTAGAATT+TGG + chr2.2:13950082-13950101 MS.gene69832:CDS 35.0%
TCTGTGGTTTATTGTGCATA+TGG + chr2.2:13950322-13950341 MS.gene69832:CDS 35.0%
TTAACATGAGGAACTGTGAT+AGG - chr2.2:13949713-13949732 None:intergenic 35.0%
TTGAAGAAGCTTTACCAGAA+GGG + chr2.2:13950455-13950474 MS.gene69832:CDS 35.0%
TTTAGTGGCTCAGGTAATAT+AGG - chr2.2:13950250-13950269 None:intergenic 35.0%
! AAAACTTGATGGATGAATCG+GGG - chr2.2:13950036-13950055 None:intergenic 35.0%
! ATTGACTCAAATCCAATAGG+TGG - chr2.2:13950436-13950455 None:intergenic 35.0%
! TAGTTTTCTGTGGGAAACTA+GGG - chr2.2:13950077-13950096 None:intergenic 35.0%
! TCCTCTAATGTAGCTTTTAG+TGG - chr2.2:13950265-13950284 None:intergenic 35.0%
!! AATGTTTCCATGGTTTGCTA+TGG + chr2.2:13949553-13949572 MS.gene69832:CDS 35.0%
!! ATGTTTCCATGGTTTGCTAT+GGG + chr2.2:13949554-13949573 MS.gene69832:CDS 35.0%
!! TTGCTTGGTCTTGAATTAAC+AGG + chr2.2:13950385-13950404 MS.gene69832:CDS 35.0%
!!! CCAAGTTTTTGAGTCAAGTT+TGG - chr2.2:13949890-13949909 None:intergenic 35.0%
AACATTGCTATGTGCAAAGG+AGG - chr2.2:13949539-13949558 None:intergenic 40.0%
ATCCTTCTCTGTTTGATCCA+TGG - chr2.2:13949804-13949823 None:intergenic 40.0%
ATCTCATGAAACCACCTTCA+GGG + chr2.2:13950008-13950027 MS.gene69832:CDS 40.0%
CAAAGCTGTGAAGATTGTGA+TGG + chr2.2:13950750-13950769 MS.gene69832:CDS 40.0%
CCAAGGTAAGCTGATGATAT+TGG - chr2.2:13949944-13949963 None:intergenic 40.0%
CCAATATCATCAGCTTACCT+TGG + chr2.2:13949941-13949960 MS.gene69832:CDS 40.0%
CTTGCATTCATGATATGGTC+AGG - chr2.2:13950649-13950668 None:intergenic 40.0%
GATGTAGTTTCAGCATCATG+AGG - chr2.2:13949743-13949762 None:intergenic 40.0%
GCCACTAAAAGCTACATTAG+AGG + chr2.2:13950261-13950280 MS.gene69832:CDS 40.0%
GGAAACATTGCTATGTGCAA+AGG - chr2.2:13949542-13949561 None:intergenic 40.0%
GGATGTTTCATAACACACTG+TGG + chr2.2:13950559-13950578 MS.gene69832:CDS 40.0%
GTTGAGAAAGGTGATGAAGA+TGG + chr2.2:13950703-13950722 MS.gene69832:CDS 40.0%
GTTGGTGTAGAAGTTGAGAA+AGG + chr2.2:13950691-13950710 MS.gene69832:CDS 40.0%
TGAGGAAGACCATTAACATG+AGG - chr2.2:13949725-13949744 None:intergenic 40.0%
TGCACATAGCAATGTTTCCA+TGG + chr2.2:13949543-13949562 MS.gene69832:CDS 40.0%
TGGCTTAAAGGATTCAAACC+TGG + chr2.2:13950298-13950317 MS.gene69832:CDS 40.0%
TTGTTGGAGAGACTGAGAAA+TGG - chr2.2:13949590-13949609 None:intergenic 40.0%
! AATGTAGCTTTTAGTGGCTC+AGG - chr2.2:13950259-13950278 None:intergenic 40.0%
! ACTTGTTAACACGTGTCAGT+TGG + chr2.2:13950603-13950622 MS.gene69832:CDS 40.0%
! TCAGATGCAGTTGCTTTCAA+AGG + chr2.2:13950151-13950170 MS.gene69832:CDS 40.0%
!! CTAGTTTTCTGTGGGAAACT+AGG - chr2.2:13950078-13950097 None:intergenic 40.0%
AAGTGTCCCATAGCAAACCA+TGG - chr2.2:13949563-13949582 None:intergenic 45.0%
AGCCATGGATCAAACAGAGA+AGG + chr2.2:13949799-13949818 MS.gene69832:CDS 45.0%
ATAGGACCTGAAAGCAGAAC+AGG - chr2.2:13950232-13950251 None:intergenic 45.0%
ATATGGTCAGGATCTACACG+TGG - chr2.2:13950637-13950656 None:intergenic 45.0%
ATTGCTATGTGCAAAGGAGG+AGG - chr2.2:13949536-13949555 None:intergenic 45.0%
CCATGGCTGTAGCAATAAGA+GGG - chr2.2:13949787-13949806 None:intergenic 45.0%
GATCTCATGAAACCACCTTC+AGG + chr2.2:13950007-13950026 MS.gene69832:CDS 45.0%
GCACAATAAACCACAGAACC+AGG - chr2.2:13950319-13950338 None:intergenic 45.0%
GGAGCTGCTTCTATAACTGA+GGG + chr2.2:13950580-13950599 MS.gene69832:CDS 45.0%
GGTAAACCTGTTCTGCTTTC+AGG + chr2.2:13950223-13950242 MS.gene69832:CDS 45.0%
TCCATGGCTGTAGCAATAAG+AGG - chr2.2:13949788-13949807 None:intergenic 45.0%
TGGAGCTGCTTCTATAACTG+AGG + chr2.2:13950579-13950598 MS.gene69832:CDS 45.0%
TTACACGATCGCTCTGACAT+AGG + chr2.2:13950118-13950137 MS.gene69832:CDS 45.0%
! CAGTTTCAAGCGTTGTTGCT+TGG + chr2.2:13950370-13950389 MS.gene69832:CDS 45.0%
! GGCTTAAGTGCTGCAAGAAA+TGG - chr2.2:13950415-13950434 None:intergenic 45.0%
!! AGGATTCAAACCTGGTTCTG+TGG + chr2.2:13950306-13950325 MS.gene69832:CDS 45.0%
CCCTCTTATTGCTACAGCCA+TGG + chr2.2:13949784-13949803 MS.gene69832:CDS 50.0%
GCAGCACTTAAGCCACCTAT+TGG + chr2.2:13950421-13950440 MS.gene69832:CDS 50.0%
GATGAATCGGGGAACCCTGA+AGG - chr2.2:13950025-13950044 None:intergenic 55.0%
GAATCGGGGAACCCTGAAGG+TGG - chr2.2:13950022-13950041 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 13949524 13950900 13949524 ID=MS.gene69832
chr2.2 mRNA 13949524 13950900 13949524 ID=MS.gene69832.t1;Parent=MS.gene69832
chr2.2 exon 13949524 13950900 13949524 ID=MS.gene69832.t1.exon1;Parent=MS.gene69832.t1
chr2.2 CDS 13949524 13950900 13949524 ID=cds.MS.gene69832.t1;Parent=MS.gene69832.t1
Gene Sequence

>MS.gene69832

ATGGATTCTCCTCCTCCTTTGCACATAGCAATGTTTCCATGGTTTGCTATGGGACACTTAACTCCATTTCTCAGTCTCTCCAACAAATTAGCATTAAGAGGTCACAAAATCTCATTCTTCATCCCTAAAAACACACTCAACAAATTACAACATCTTAACCTTCATCCAAATCTTATTACCTTTTTTCCTATCACAGTTCCTCATGTTAATGGTCTTCCTCATGATGCTGAAACTACATCAGATGTACCCTCTTCTTTATTCCCTCTTATTGCTACAGCCATGGATCAAACAGAGAAGGATATTGAACTTCTTATAGAGGAACTAAAGCCACAAATAGTTTTCTTTGATTTTCAATATTGGCTACCAAACTTGACTCAAAAACTTGGTATCAAAAGTCTTCAATACTTGATATGGAATCCAATATCATCAGCTTACCTTGGAAATATACCAAGACAAAGTCAAGGAAGATTTTTAACTGAATTTGATCTCATGAAACCACCTTCAGGGTTCCCCGATTCATCCATCAAGTTTTATTCGCATGAACTTCAAGCCCTAGTTTCCCACAGAAAACTAGAATTTGGAAGTGGTGTTTTATTACACGATCGCTCTGACATAGGCACAAAGTTTTCAGATGCAGTTGCTTTCAAAGGATGCAGAGAAATTGATGGCTTATATGCTAATTATCTTCAAACTGTTTTTGGTAAACCTGTTCTGCTTTCAGGTCCTATATTACCTGAGCCACTAAAAGCTACATTAGAGGAAAAATGGTTAAAATGGCTTAAAGGATTCAAACCTGGTTCTGTGGTTTATTGTGCATATGGAAGTGAAGGTCCATTAGAAAAAAATCAGTTTCAAGCGTTGTTGCTTGGTCTTGAATTAACAGGTTTTCCATTTCTTGCAGCACTTAAGCCACCTATTGGATTTGAGTCAATTGAAGAAGCTTTACCAGAAGGGTTTAATGAAAGAGTTAAAGGAAAAGGGATTGTTTATGGAAGTTGGATTCAACAACAATTGATTTTAGAACATCCTTCTGTTGGATGTTTCATAACACACTGTGGAGCTGCTTCTATAACTGAGGGACTTGTTAACACGTGTCAGTTGGTGTTCTTGCCACGTGTAGATCCTGACCATATCATGAATGCAAGAATGATGAGTGAAAAGTTGAAGGTTGGTGTAGAAGTTGAGAAAGGTGATGAAGATGGATTGTTTACAAAAGAAAATGTGTGCAAAGCTGTGAAGATTGTGATGGATGATGAGAATGAAGTTGGAAGAGAAGTGAGAGCTAATCATGCTAAACTGAGAAACTTTTTATTGAGAAGCAATTTAGAATCTTCATGTGTTGATAATTTCTGTCAAAAACTCTACGATTTGCTCTAG

Protein sequence

>MS.gene69832.t1

MDSPPPLHIAMFPWFAMGHLTPFLSLSNKLALRGHKISFFIPKNTLNKLQHLNLHPNLITFFPITVPHVNGLPHDAETTSDVPSSLFPLIATAMDQTEKDIELLIEELKPQIVFFDFQYWLPNLTQKLGIKSLQYLIWNPISSAYLGNIPRQSQGRFLTEFDLMKPPSGFPDSSIKFYSHELQALVSHRKLEFGSGVLLHDRSDIGTKFSDAVAFKGCREIDGLYANYLQTVFGKPVLLSGPILPEPLKATLEEKWLKWLKGFKPGSVVYCAYGSEGPLEKNQFQALLLGLELTGFPFLAALKPPIGFESIEEALPEGFNERVKGKGIVYGSWIQQQLILEHPSVGCFITHCGAASITEGLVNTCQLVFLPRVDPDHIMNARMMSEKLKVGVEVEKGDEDGLFTKENVCKAVKIVMDDENEVGREVRANHAKLRNFLLRSNLESSCVDNFCQKLYDLL