AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene69838

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69838.t1 MTR_2g083480 93.668 458 29 0 1 458 1 458 0.0 873
MS.gene69838.t1 MTR_2g083420 79.476 458 70 1 1 458 1 434 0.0 750
MS.gene69838.t1 MTR_2g083390 78.821 458 73 1 1 458 1 434 0.0 743
MS.gene69838.t1 MTR_2g083430 78.603 458 98 0 1 458 1 458 0.0 723
MS.gene69838.t1 MTR_2g083380 66.812 458 152 0 1 458 18 475 0.0 631
MS.gene69838.t1 MTR_2g083490 65.721 458 157 0 1 458 1 458 0.0 624
MS.gene69838.t1 MTR_4g079250 60.652 460 177 3 1 458 1 458 0.0 583
MS.gene69838.t1 MTR_4g079270 60.000 460 180 3 1 458 1 458 0.0 583
MS.gene69838.t1 MTR_2g014900 59.424 451 182 1 8 458 7 456 0.0 553
MS.gene69838.t1 MTR_2g083360 62.031 453 67 4 6 458 27 374 0.0 531
MS.gene69838.t1 MTR_1g090270 41.901 463 245 11 7 457 14 464 8.53e-116 348
MS.gene69838.t1 MTR_2g086283 56.078 255 60 2 203 457 133 335 3.66e-90 278
MS.gene69838.t1 MTR_2g086283 62.044 137 51 1 11 147 1 136 1.62e-51 177
MS.gene69838.t1 MTR_4g059370 41.411 326 178 6 139 457 72 391 1.11e-80 255
MS.gene69838.t1 MTR_8g068360 32.340 470 297 12 2 458 6 467 1.96e-67 223
MS.gene69838.t1 MTR_8g068330 31.712 473 299 14 1 458 1 464 1.75e-66 220
MS.gene69838.t1 MTR_7g067330 32.096 458 265 14 2 451 3 422 8.39e-65 215
MS.gene69838.t1 MTR_8g068340 31.906 467 296 12 2 454 6 464 1.13e-64 216
MS.gene69838.t1 MTR_4g123553 32.035 462 284 14 6 454 13 457 2.14e-64 215
MS.gene69838.t1 MTR_2g014930 42.069 290 86 6 17 305 9 217 9.27e-64 206
MS.gene69838.t1 MTR_7g067120 33.043 460 258 15 2 451 3 422 2.89e-63 211
MS.gene69838.t1 MTR_2g008225 31.116 466 298 12 2 455 9 463 1.45e-61 207
MS.gene69838.t1 MTR_2g008220 31.330 466 297 13 2 455 8 462 6.93e-61 206
MS.gene69838.t1 MTR_2g008226 32.623 469 286 15 6 454 8 466 2.17e-60 204
MS.gene69838.t1 MTR_4g079280 42.982 228 85 2 11 238 1 183 2.68e-59 192
MS.gene69838.t1 MTR_6g036650 29.574 470 302 13 1 454 11 467 1.70e-56 194
MS.gene69838.t1 MTR_6g042310 30.407 467 283 16 7 454 17 460 2.03e-56 194
MS.gene69838.t1 MTR_2g046620 30.303 462 292 13 6 454 14 458 2.24e-55 191
MS.gene69838.t1 MTR_2g083440 76.471 102 24 0 357 458 11 112 1.24e-48 162
MS.gene69838.t1 MTR_4g077960 28.509 456 286 16 17 454 1 434 5.82e-48 171
MS.gene69838.t1 MTR_1g090280 46.561 189 89 5 261 438 108 295 2.92e-46 163
MS.gene69838.t1 MTR_8g007650 30.085 472 295 17 7 456 6 464 1.43e-45 165
MS.gene69838.t1 MTR_8g007565 30.021 473 294 17 7 456 6 464 1.59e-45 165
MS.gene69838.t1 MTR_5g066410 28.571 469 283 14 11 456 1 440 2.02e-44 161
MS.gene69838.t1 MTR_8g066610 27.862 463 292 14 1 433 1 451 3.59e-36 139
MS.gene69838.t1 MTR_8g071070 27.310 487 301 16 5 457 4 471 2.36e-35 137
MS.gene69838.t1 MTR_2g098430 26.477 457 297 14 9 437 7 452 1.94e-33 132
MS.gene69838.t1 MTR_8g009055 28.728 456 279 17 7 434 5 442 5.35e-31 124
MS.gene69838.t1 MTR_4g031800 25.458 491 303 16 6 458 7 472 9.65e-30 121
MS.gene69838.t1 MTR_5g087620 27.056 462 284 17 8 428 10 459 9.65e-30 121
MS.gene69838.t1 MTR_1g062380 27.564 468 285 19 5 432 13 466 1.05e-29 121
MS.gene69838.t1 MTR_6g023665 25.901 444 293 12 9 428 14 445 1.93e-29 120
MS.gene69838.t1 MTR_8g009050 28.298 470 263 17 7 434 5 442 3.92e-29 119
MS.gene69838.t1 MTR_5g045970 26.767 467 289 15 5 432 13 465 4.10e-29 119
MS.gene69838.t1 MTR_0009s0240 27.603 413 265 14 5 397 4 402 4.39e-29 119
MS.gene69838.t1 MTR_6g488280 36.318 201 114 4 241 428 239 438 8.94e-29 118
MS.gene69838.t1 MTR_0428s0010 36.318 201 114 4 241 428 239 438 8.94e-29 118
MS.gene69838.t1 MTR_7g070660 23.756 442 302 12 7 421 10 443 1.37e-27 115
MS.gene69838.t1 MTR_3g435310 35.751 193 117 4 258 450 227 412 1.59e-27 114
MS.gene69838.t1 MTR_3g435310 32.353 136 87 4 6 138 16 149 9.10e-16 79.3
MS.gene69838.t1 MTR_7g013220 26.623 462 284 19 8 444 5 436 2.02e-27 114
MS.gene69838.t1 MTR_8g008990 28.025 471 265 19 7 434 5 444 4.97e-27 113
MS.gene69838.t1 MTR_6g005600 28.986 345 188 11 123 436 124 442 6.59e-27 113
MS.gene69838.t1 MTR_8g009073 27.669 459 278 18 7 434 5 440 9.34e-27 112
MS.gene69838.t1 MTR_0184s0030 34.862 218 116 7 237 435 234 444 1.02e-26 112
MS.gene69838.t1 MTR_6g038200 26.915 457 271 20 8 436 11 432 1.06e-26 112
MS.gene69838.t1 MTR_0078s0060 28.470 281 171 8 167 436 181 442 2.78e-26 111
MS.gene69838.t1 MTR_8g027885 26.875 480 254 19 6 436 16 447 3.88e-26 110
MS.gene69838.t1 MTR_7g117405 28.233 464 275 20 8 433 12 455 3.89e-26 110
MS.gene69838.t1 MTR_3g009510 32.258 217 128 4 236 436 241 454 4.37e-26 110
MS.gene69838.t1 MTR_4g485620 25.917 436 289 15 22 433 3 428 4.94e-26 110
MS.gene69838.t1 MTR_8g027870 26.793 474 262 18 6 436 16 447 5.06e-26 110
MS.gene69838.t1 MTR_8g012635 27.681 401 242 15 70 452 96 466 6.49e-26 110
MS.gene69838.t1 MTR_8g006270 28.369 282 170 7 167 435 178 440 7.59e-26 110
MS.gene69838.t1 MTR_8g006730 25.000 444 301 13 8 428 6 440 9.56e-26 109
MS.gene69838.t1 MTR_8g465670 27.044 477 259 20 9 434 8 446 1.11e-25 109
MS.gene69838.t1 MTR_7g013200 26.116 448 281 16 8 438 5 419 1.14e-25 109
MS.gene69838.t1 MTR_4g485630 25.380 461 293 15 7 436 8 448 1.15e-25 109
MS.gene69838.t1 MTR_6g038230 26.304 460 278 20 8 440 11 436 1.44e-25 108
MS.gene69838.t1 MTR_7g013180 25.893 448 289 14 8 432 5 432 1.57e-25 108
MS.gene69838.t1 MTR_8g009073 32.743 226 134 6 223 434 90 311 1.78e-25 107
MS.gene69838.t1 MTR_6g033615 30.802 237 142 6 216 434 194 426 1.82e-25 108
MS.gene69838.t1 MTR_0184s0040 34.536 194 113 5 253 436 269 458 2.58e-25 108
MS.gene69838.t1 MTR_0078s0190 34.536 194 113 5 253 436 269 458 2.58e-25 108
MS.gene69838.t1 MTR_4g485590 26.895 409 241 13 8 394 9 381 3.57e-25 107
MS.gene69838.t1 MTR_6g038220 25.664 452 282 17 8 436 11 431 3.86e-25 107
MS.gene69838.t1 MTR_2g046820 34.783 230 136 6 236 454 236 462 4.54e-25 107
MS.gene69838.t1 MTR_7g070740 24.364 472 289 17 7 433 10 458 4.58e-25 108
MS.gene69838.t1 MTR_8g466240 27.273 429 251 20 1 398 1 399 4.78e-25 107
MS.gene69838.t1 MTR_1g019510 27.851 456 280 20 7 434 5 439 6.50e-25 107
MS.gene69838.t1 MTR_8g012650 31.390 223 132 5 235 440 235 453 7.48e-25 107
MS.gene69838.t1 MTR_7g117170 37.705 183 98 5 257 427 266 444 9.32e-25 107
MS.gene69838.t1 MTR_6g033725 35.678 199 115 6 241 434 247 437 1.27e-24 106
MS.gene69838.t1 MTR_8g006710 24.161 447 298 14 9 428 7 439 1.75e-24 105
MS.gene69838.t1 MTR_8g012730 31.718 227 136 5 228 440 69 290 2.09e-24 103
MS.gene69838.t1 MTR_7g102550 27.097 465 284 19 8 432 9 458 2.36e-24 105
MS.gene69838.t1 MTR_1g107350 25.054 463 299 16 1 434 1 444 2.56e-24 105
MS.gene69838.t1 MTR_7g070610 23.504 468 299 15 7 433 12 461 2.71e-24 105
MS.gene69838.t1 MTR_8g009063 27.233 459 283 18 7 436 12 448 4.34e-24 105
MS.gene69838.t1 MTR_8g006220 25.745 470 282 16 9 434 7 453 8.33e-24 104
MS.gene69838.t1 MTR_6g033625 27.312 465 270 20 9 434 5 440 8.41e-24 103
MS.gene69838.t1 MTR_5g035580 33.333 207 128 5 252 458 257 453 9.09e-24 103
MS.gene69838.t1 MTR_2g046750 34.783 230 136 6 236 454 239 465 9.77e-24 103
MS.gene69838.t1 MTR_5g035560 25.658 456 273 17 7 434 10 427 1.10e-23 103
MS.gene69838.t1 MTR_7g046490 32.331 266 148 10 183 435 194 440 1.28e-23 103
MS.gene69838.t1 MTR_1g019520 34.392 189 109 4 257 434 4 188 2.22e-23 98.2
MS.gene69838.t1 MTR_7g102460 26.013 469 282 18 7 428 8 458 3.03e-23 102
MS.gene69838.t1 MTR_4g024020 25.652 460 298 15 7 428 8 461 3.14e-23 102
MS.gene69838.t1 MTR_7g102560 25.255 491 282 17 1 436 1 461 4.75e-23 102
MS.gene69838.t1 MTR_6g038240 32.967 182 111 6 254 435 261 431 7.52e-23 101
MS.gene69838.t1 MTR_0078s0010 34.375 192 112 5 253 434 254 441 7.89e-23 101
MS.gene69838.t1 MTR_7g055710 23.542 463 304 14 7 433 10 458 1.05e-22 100
MS.gene69838.t1 MTR_8g009067 33.511 188 111 4 257 434 139 322 1.69e-22 99.0
MS.gene69838.t1 MTR_2g034990 24.342 456 298 15 1 422 4 446 1.82e-22 100
MS.gene69838.t1 MTR_8g009067 33.511 188 111 4 257 434 257 440 1.83e-22 100
MS.gene69838.t1 MTR_8g012630 32.323 198 116 5 257 440 204 397 2.43e-22 99.4
MS.gene69838.t1 MTR_7g013240 26.339 448 288 19 8 443 6 423 2.92e-22 99.4
MS.gene69838.t1 MTR_8g074550 23.279 494 289 19 1 434 1 464 3.88e-22 99.4
MS.gene69838.t1 MTR_4g117980 24.289 457 291 17 6 424 9 448 4.03e-22 99.4
MS.gene69838.t1 MTR_8g077590 28.223 287 167 8 155 428 180 440 4.66e-22 99.0
MS.gene69838.t1 MTR_1g107315 26.697 442 276 17 1 412 1 424 4.87e-22 99.0
MS.gene69838.t1 MTR_8g006260 32.487 197 118 6 259 444 263 455 5.33e-22 98.6
MS.gene69838.t1 MTR_6g038300 24.569 464 282 18 8 440 11 437 6.09e-22 98.6
MS.gene69838.t1 MTR_7g071040 22.581 465 311 12 5 433 14 465 6.76e-22 98.6
MS.gene69838.t1 MTR_2g040530 31.466 232 146 5 233 454 236 464 6.85e-22 98.2
MS.gene69838.t1 MTR_3g049970 26.350 463 289 19 3 434 4 445 6.98e-22 98.6
MS.gene69838.t1 MTR_7g013260 25.059 423 286 16 8 420 6 407 7.90e-22 97.8
MS.gene69838.t1 MTR_3g069690 32.240 183 115 5 253 434 251 425 1.11e-21 97.8
MS.gene69838.t1 MTR_7g070910 22.629 464 312 13 5 433 8 459 1.48e-21 97.4
MS.gene69838.t1 MTR_4g117950 24.719 445 286 14 6 422 4 427 1.51e-21 97.4
MS.gene69838.t1 MTR_6g033675 32.020 203 130 5 236 434 242 440 1.71e-21 97.4
MS.gene69838.t1 MTR_5g098930 28.279 244 150 6 236 456 228 469 2.16e-21 97.1
MS.gene69838.t1 MTR_5g090610 29.457 258 154 9 206 438 190 444 2.43e-21 96.7
MS.gene69838.t1 MTR_5g019580 31.325 249 143 8 232 456 233 477 2.52e-21 96.7
MS.gene69838.t1 MTR_5g019580 31.325 249 143 8 232 456 257 501 2.99e-21 96.7
MS.gene69838.t1 MTR_7g047030 33.511 188 111 5 257 434 258 441 3.03e-21 96.3
MS.gene69838.t1 MTR_7g047270 33.511 188 111 5 257 434 258 441 3.03e-21 96.3
MS.gene69838.t1 MTR_2g035020 24.416 471 303 17 1 436 4 456 3.39e-21 96.3
MS.gene69838.t1 MTR_8g083280 30.631 222 137 7 241 456 249 459 4.50e-21 95.9
MS.gene69838.t1 MTR_7g070810 24.161 447 292 13 7 421 8 439 4.83e-21 95.9
MS.gene69838.t1 MTR_7g070940 22.444 450 316 13 7 433 8 447 5.01e-21 95.9
MS.gene69838.t1 MTR_3g009490 35.329 167 92 4 283 436 3 166 5.29e-21 90.9
MS.gene69838.t1 MTR_7g102490 25.597 461 296 16 7 428 8 460 5.86e-21 95.9
MS.gene69838.t1 MTR_0536s0010 25.280 447 280 17 6 422 19 441 6.51e-21 95.5
MS.gene69838.t1 MTR_8g088560 23.566 488 298 18 5 454 7 457 8.46e-21 95.1
MS.gene69838.t1 MTR_6g033660 34.270 178 111 4 259 434 266 439 8.83e-21 95.1
MS.gene69838.t1 MTR_4g128720 25.901 444 295 17 7 438 14 435 9.11e-21 94.7
MS.gene69838.t1 MTR_5g045960 25.696 467 289 19 7 432 8 457 9.84e-21 95.1
MS.gene69838.t1 MTR_5g090660 29.646 226 136 6 234 438 233 456 1.16e-20 95.1
MS.gene69838.t1 MTR_7g070800 22.199 473 299 14 5 433 3 450 1.19e-20 94.7
MS.gene69838.t1 MTR_5g090700 31.250 224 131 7 236 438 239 460 1.20e-20 94.7
MS.gene69838.t1 MTR_0536s0020 24.183 459 278 15 7 424 17 446 1.78e-20 94.4
MS.gene69838.t1 MTR_5g090620 28.870 239 139 6 229 438 223 459 1.91e-20 94.0
MS.gene69838.t1 MTR_8g083290 32.632 190 116 6 246 434 261 439 2.96e-20 93.6
MS.gene69838.t1 MTR_5g027210 26.199 271 163 6 212 450 212 477 3.44e-20 93.2
MS.gene69838.t1 MTR_6g035185 22.505 471 302 15 1 429 4 453 3.76e-20 93.2
MS.gene69838.t1 MTR_3g079480 24.078 461 287 21 8 428 21 458 4.29e-20 93.2
MS.gene69838.t1 MTR_7g102450 25.714 455 280 19 8 428 11 441 5.69e-20 92.8
MS.gene69838.t1 MTR_6g035265 22.747 466 302 15 6 434 9 453 6.41e-20 92.4
MS.gene69838.t1 MTR_7g102520 26.437 435 282 16 7 413 11 435 7.92e-20 92.4
MS.gene69838.t1 MTR_7g071050 23.729 472 284 17 7 455 12 430 1.07e-19 91.7
MS.gene69838.t1 MTR_8g012745 31.308 214 127 7 237 435 237 445 1.53e-19 91.3
MS.gene69838.t1 MTR_5g090630 31.050 219 128 8 241 438 233 449 1.94e-19 90.9
MS.gene69838.t1 MTR_4g094920 30.288 208 136 6 253 454 275 479 2.20e-19 90.9
MS.gene69838.t1 MTR_7g070780 22.246 463 314 13 5 433 8 458 2.28e-19 90.9
MS.gene69838.t1 MTR_8g008970 28.030 264 159 6 184 434 195 440 2.74e-19 91.3
MS.gene69838.t1 MTR_8g008970 28.788 264 152 9 178 436 531 763 3.82e-17 84.7
MS.gene69838.t1 MTR_4g117890 25.270 463 282 19 7 432 12 447 2.81e-19 90.5
MS.gene69838.t1 MTR_8g064880 24.889 450 272 17 5 412 6 431 3.16e-19 90.5
MS.gene69838.t1 MTR_4g485640 29.487 234 136 8 220 427 409 639 3.34e-19 90.9
MS.gene69838.t1 MTR_2g059240 24.299 428 269 14 2 397 8 412 3.43e-19 90.1
MS.gene69838.t1 MTR_4g082810 27.423 423 255 12 7 397 6 408 3.81e-19 89.7
MS.gene69838.t1 MTR_1g107360 30.088 226 136 6 220 434 223 437 3.97e-19 90.1
MS.gene69838.t1 MTR_7g070930 22.316 475 314 14 1 433 1 462 4.40e-19 90.1
MS.gene69838.t1 MTR_5g098960 33.493 209 113 10 229 426 225 418 6.56e-19 89.4
MS.gene69838.t1 MTR_5g090580 27.692 260 156 8 206 438 204 458 7.72e-19 89.4
MS.gene69838.t1 MTR_4g095008 29.808 208 137 6 253 454 260 464 7.79e-19 89.4
MS.gene69838.t1 MTR_3g084520 27.397 219 130 7 241 436 238 450 8.76e-19 89.0
MS.gene69838.t1 MTR_8g064870 24.569 464 294 18 5 434 8 449 8.91e-19 89.0
MS.gene69838.t1 MTR_4g128690 33.708 178 105 5 257 434 264 428 9.21e-19 89.0
MS.gene69838.t1 MTR_4g082820 26.157 432 274 13 7 406 6 424 9.39e-19 89.0
MS.gene69838.t1 MTR_3g084540 28.272 191 125 4 253 436 266 451 1.04e-18 89.0
MS.gene69838.t1 MTR_5g067170 31.522 184 111 4 253 422 262 444 1.55e-18 88.2
MS.gene69838.t1 MTR_8g044140 23.000 400 232 12 64 416 37 407 1.57e-18 88.2
MS.gene69838.t1 MTR_1g032490 25.285 439 284 17 2 412 4 426 1.61e-18 88.2
MS.gene69838.t1 MTR_5g070040 32.759 232 135 11 221 439 228 451 1.92e-18 87.8
MS.gene69838.t1 MTR_3g479520 24.356 505 304 23 1 454 1 478 2.01e-18 87.8
MS.gene69838.t1 MTR_3g069710 33.520 179 109 6 257 434 258 427 2.26e-18 87.8
MS.gene69838.t1 MTR_3g084530 29.319 191 122 5 253 436 266 450 2.34e-18 87.8
MS.gene69838.t1 MTR_7g080935 24.062 453 289 16 7 436 10 430 3.70e-18 87.0
MS.gene69838.t1 MTR_1g029540 22.566 452 297 17 13 440 19 441 4.21e-18 87.0
MS.gene69838.t1 MTR_2g035040 30.412 194 116 5 257 436 173 361 4.27e-18 86.3
MS.gene69838.t1 MTR_7g080950 31.217 189 117 7 253 441 253 428 5.23e-18 86.7
MS.gene69838.t1 MTR_7g080940 30.601 183 116 5 254 436 259 430 5.94e-18 86.3
MS.gene69838.t1 MTR_0288s0020 25.105 478 257 19 8 429 10 442 9.52e-18 85.9
MS.gene69838.t1 MTR_4g117960 23.305 472 293 19 1 429 6 451 1.10e-17 85.9
MS.gene69838.t1 MTR_5g090670 28.000 200 124 4 257 438 263 460 1.23e-17 85.5
MS.gene69838.t1 MTR_5g029800 23.778 450 294 15 1 417 4 437 1.66e-17 85.1
MS.gene69838.t1 MTR_3g031450 25.532 235 143 6 220 439 213 430 2.03e-17 84.7
MS.gene69838.t1 MTR_4g108250 21.581 468 314 12 7 436 10 462 3.13e-17 84.3
MS.gene69838.t1 MTR_6g013900 32.022 178 107 6 253 428 283 448 3.16e-17 84.3
MS.gene69838.t1 MTR_1g107375 29.130 230 133 8 220 434 215 429 3.36e-17 84.0
MS.gene69838.t1 MTR_3g479610 29.070 172 113 4 257 428 120 282 4.12e-17 82.4
MS.gene69838.t1 MTR_8g032950 23.261 460 299 18 6 429 10 451 4.21e-17 84.0
MS.gene69838.t1 MTR_7g012120 23.799 458 295 15 1 422 9 448 4.57e-17 84.0
MS.gene69838.t1 MTR_1g107365 28.700 223 131 8 227 434 258 467 4.61e-17 84.0
MS.gene69838.t1 MTR_7g011470 28.400 250 145 9 201 434 206 437 6.16e-17 83.2
MS.gene69838.t1 MTR_0891s0010 28.655 171 113 4 257 427 97 258 7.08e-17 81.3
MS.gene69838.t1 MTR_7g011470 28.400 250 145 9 201 434 210 441 7.23e-17 83.2
MS.gene69838.t1 MTR_5g016480 28.649 185 126 5 251 434 267 446 9.44e-17 82.8
MS.gene69838.t1 MTR_8g090095 27.660 235 152 7 221 440 230 461 1.15e-16 82.4
MS.gene69838.t1 MTR_4g008630 26.250 240 162 6 210 437 205 441 1.22e-16 82.4
MS.gene69838.t1 MTR_5g090600 25.725 276 174 9 199 458 193 453 1.35e-16 82.4
MS.gene69838.t1 MTR_7g470610 33.125 160 102 4 253 409 128 285 1.72e-16 80.1
MS.gene69838.t1 MTR_7g070583 33.125 160 102 4 253 409 128 285 1.72e-16 80.1
MS.gene69838.t1 MTR_5g040030 26.230 244 149 7 215 434 224 460 2.05e-16 82.0
MS.gene69838.t1 MTR_6g014170 29.670 182 118 5 253 434 266 437 2.86e-16 81.3
MS.gene69838.t1 MTR_6g013990 25.506 247 156 9 201 434 222 453 1.00e-15 79.7
MS.gene69838.t1 MTR_6g013920 29.609 179 110 6 253 428 283 448 1.20e-15 79.3
MS.gene69838.t1 MTR_2g008210 31.250 176 112 6 253 427 278 445 1.27e-15 79.3
MS.gene69838.t1 MTR_7g070860 20.682 469 293 13 7 433 6 437 1.30e-15 79.3
MS.gene69838.t1 MTR_6g014220 29.213 178 116 5 257 434 286 453 1.51e-15 79.0
MS.gene69838.t1 MTR_5g004940 33.582 134 87 2 242 374 182 314 1.82e-15 78.6
MS.gene69838.t1 MTR_8g056740 25.225 222 152 5 220 431 121 338 2.81e-15 77.8
MS.gene69838.t1 MTR_3g479490 26.136 176 121 4 259 434 283 449 2.99e-15 78.2
MS.gene69838.t1 MTR_6g014020 29.775 178 115 5 253 428 284 453 3.01e-15 78.2
MS.gene69838.t1 MTR_5g070090 26.502 283 171 11 166 435 184 442 3.07e-15 78.2
MS.gene69838.t1 MTR_1g107285 29.756 205 120 6 220 410 223 417 3.73e-15 77.8
MS.gene69838.t1 MTR_3g008010 29.834 181 111 7 257 434 286 453 3.78e-15 77.8
MS.gene69838.t1 MTR_6g014200 28.571 182 120 5 253 434 281 452 3.95e-15 77.8
MS.gene69838.t1 MTR_5g072840 23.195 457 287 17 8 439 10 427 4.13e-15 77.8
MS.gene69838.t1 MTR_5g072820 24.583 240 157 6 210 439 202 427 4.21e-15 77.4
MS.gene69838.t1 MTR_7g070870 29.878 164 104 4 218 371 225 387 4.94e-15 77.4
MS.gene69838.t1 MTR_8g059425 26.693 251 153 12 199 429 220 459 5.89e-15 77.4
MS.gene69838.t1 MTR_5g039900 22.174 460 311 14 7 434 12 456 6.63e-15 77.0
MS.gene69838.t1 MTR_6g014250 28.889 180 114 6 257 434 286 453 7.80e-15 77.0
MS.gene69838.t1 MTR_6g011340 26.908 249 151 10 201 429 224 461 8.57e-15 76.6
MS.gene69838.t1 MTR_4g118000 23.326 463 297 17 6 435 10 447 1.17e-14 76.3
MS.gene69838.t1 MTR_5g072830 23.629 237 159 5 208 434 200 424 1.32e-14 75.9
MS.gene69838.t1 MTR_6g014190 28.804 184 117 6 253 434 91 262 1.56e-14 74.3
MS.gene69838.t1 MTR_4g064987 24.396 455 279 21 18 446 18 433 2.12e-14 75.5
MS.gene69838.t1 MTR_6g014310 26.104 249 152 10 201 434 225 456 2.18e-14 75.5
MS.gene69838.t1 MTR_8g007585 28.889 180 114 6 257 434 200 367 3.00e-14 74.7
MS.gene69838.t1 MTR_6g013450 27.072 181 125 4 253 429 285 462 5.40e-14 74.3
MS.gene69838.t1 MTR_5g058320 28.409 176 116 5 253 428 269 434 5.70e-14 74.3
MS.gene69838.t1 MTR_6g014050 28.571 182 116 6 255 434 287 456 7.25e-14 73.9
MS.gene69838.t1 MTR_4g064987 24.078 461 279 21 18 446 18 439 8.28e-14 73.6
MS.gene69838.t1 MTR_6g014270 28.261 184 118 6 253 434 283 454 1.11e-13 73.2
MS.gene69838.t1 MTR_6g014240 26.923 182 123 5 253 434 251 422 1.18e-13 73.2
MS.gene69838.t1 MTR_6g014040 29.444 180 113 6 253 428 285 454 2.90e-13 72.0
MS.gene69838.t1 MTR_6g014187 23.617 470 292 21 8 434 10 455 3.02e-13 72.0
MS.gene69838.t1 MTR_7g080900 25.225 333 214 10 112 429 114 426 3.89e-13 71.6
MS.gene69838.t1 MTR_1g040310 21.696 401 233 14 64 416 75 442 5.89e-13 71.2
MS.gene69838.t1 MTR_6g014150 28.261 184 118 6 253 434 281 452 6.04e-13 70.9
MS.gene69838.t1 MTR_7g039550 26.190 252 151 9 220 447 5 245 9.87e-13 68.9
MS.gene69838.t1 MTR_8g009840 27.064 218 137 4 261 458 314 529 1.86e-12 69.7
MS.gene69838.t1 MTR_2086s0010 26.846 149 100 4 279 427 1 140 3.46e-12 65.1
MS.gene69838.t1 MTR_1996s0010 26.846 149 100 4 279 427 1 140 3.46e-12 65.1
MS.gene69838.t1 MTR_6g014290 26.667 180 118 6 257 434 286 453 4.13e-12 68.6
MS.gene69838.t1 MTR_6g013960 22.343 461 309 17 8 434 10 455 1.03e-11 67.0
MS.gene69838.t1 MTR_5g031860 29.286 140 93 4 257 395 280 414 3.00e-11 65.9
MS.gene69838.t1 MTR_6g078320 25.641 195 135 2 236 420 252 446 3.08e-11 65.9
MS.gene69838.t1 MTR_0536s0030 31.343 134 79 4 309 432 194 324 4.87e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69838.t1 AT5G53990 45.952 457 222 7 7 458 5 441 1.04e-144 421
MS.gene69838.t1 AT4G27570 44.615 455 234 7 8 458 7 447 1.69e-143 418
MS.gene69838.t1 AT5G54010 44.615 455 241 5 5 458 3 447 3.11e-143 417
MS.gene69838.t1 AT5G54060 45.435 460 242 6 5 458 10 466 1.08e-141 414
MS.gene69838.t1 AT4G27560 44.396 455 235 7 8 458 7 447 2.75e-141 412
MS.gene69838.t1 AT1G64920 44.858 457 231 7 7 458 5 445 5.38e-141 412
MS.gene69838.t1 AT2G22930 45.254 453 231 5 7 458 5 441 2.38e-139 407
MS.gene69838.t1 AT4G09500 44.812 453 233 6 7 458 5 441 6.86e-138 404
MS.gene69838.t1 AT1G64910 43.545 457 233 6 7 458 5 441 2.03e-135 397
MS.gene69838.t1 AT3G29630 43.640 456 233 6 5 454 3 440 2.01e-134 395
MS.gene69838.t1 AT3G29630 42.605 453 216 7 5 454 3 414 3.53e-126 373
MS.gene69838.t1 AT4G09500 42.478 452 220 6 7 458 5 416 3.84e-125 370
MS.gene69838.t1 AT1G50580 41.280 453 246 5 5 454 3 438 2.63e-123 367
MS.gene69838.t1 AT2G22590 34.047 467 275 17 7 454 14 466 1.07e-69 229
MS.gene69838.t1 AT5G49690 30.921 456 290 12 7 452 9 449 8.68e-65 216
MS.gene69838.t1 AT5G65550 30.085 472 299 17 1 454 1 459 4.29e-59 201
MS.gene69838.t1 AT2G22930 39.171 217 118 2 7 223 5 207 2.26e-50 173
MS.gene69838.t1 AT2G22930 36.190 105 62 3 357 458 187 289 1.66e-12 68.2
MS.gene69838.t1 AT5G12890 28.846 468 284 19 4 437 6 458 1.01e-36 141
MS.gene69838.t1 AT5G03490 25.951 447 289 12 6 435 17 438 3.68e-35 136
MS.gene69838.t1 AT4G36770 27.991 468 268 20 7 435 3 440 1.23e-34 135
MS.gene69838.t1 AT2G36770 28.478 460 283 19 6 428 12 462 6.62e-32 127
MS.gene69838.t1 AT1G73880 26.128 421 268 14 2 397 8 410 1.37e-31 126
MS.gene69838.t1 AT2G36750 28.913 460 278 18 6 429 8 454 8.80e-31 124
MS.gene69838.t1 AT2G36800 27.862 463 285 18 5 428 9 461 2.50e-30 123
MS.gene69838.t1 AT2G36780 28.510 463 277 20 7 428 13 462 3.72e-30 122
MS.gene69838.t1 AT1G51210 26.591 440 282 14 8 433 20 432 4.02e-30 122
MS.gene69838.t1 AT1G05675 27.556 450 276 17 8 434 6 428 1.64e-28 117
MS.gene69838.t1 AT2G15490 25.111 450 301 13 7 427 6 448 6.10e-28 116
MS.gene69838.t1 AT2G15490 25.166 453 300 14 7 427 6 451 6.77e-28 116
MS.gene69838.t1 AT3G50740 25.486 463 290 15 8 435 7 449 1.41e-27 115
MS.gene69838.t1 AT2G16890 26.464 461 303 18 8 445 9 456 2.12e-27 114
MS.gene69838.t1 AT2G15480 25.216 464 301 14 7 436 9 460 3.68e-27 114
MS.gene69838.t1 AT2G18570 26.096 456 301 17 1 434 1 442 4.47e-27 113
MS.gene69838.t1 AT2G31750 24.837 459 295 15 1 436 1 432 1.06e-26 112
MS.gene69838.t1 AT4G34135 25.109 458 279 15 7 428 10 439 1.42e-26 112
MS.gene69838.t1 AT4G34131 25.738 474 287 18 2 434 4 453 1.47e-26 112
MS.gene69838.t1 AT2G15480 25.503 447 287 14 7 419 9 443 1.55e-26 112
MS.gene69838.t1 AT2G31750 24.837 459 295 15 1 436 1 432 1.80e-26 112
MS.gene69838.t1 AT2G36760 27.468 466 280 18 6 428 12 462 2.86e-26 111
MS.gene69838.t1 AT1G10400 25.263 475 310 18 7 452 6 464 1.95e-25 108
MS.gene69838.t1 AT4G34138 25.100 498 302 17 5 458 8 478 2.07e-25 108
MS.gene69838.t1 AT1G01420 26.371 474 263 18 8 434 11 445 2.40e-25 108
MS.gene69838.t1 AT1G01420 26.371 474 263 18 8 434 8 442 2.44e-25 108
MS.gene69838.t1 AT3G53150 26.850 473 294 20 7 436 21 484 5.35e-25 108
MS.gene69838.t1 AT1G05680 25.778 450 284 17 8 434 6 428 5.18e-24 104
MS.gene69838.t1 AT2G31790 25.328 458 278 18 8 434 8 432 5.20e-24 104
MS.gene69838.t1 AT2G16890 25.882 425 284 16 8 412 9 422 6.42e-24 103
MS.gene69838.t1 AT4G01070 34.742 213 121 6 236 434 235 443 7.57e-24 104
MS.gene69838.t1 AT2G18560 30.556 216 131 4 232 434 143 352 9.18e-24 102
MS.gene69838.t1 AT3G53160 23.913 460 311 15 1 428 1 453 2.01e-23 103
MS.gene69838.t1 AT2G30140 24.786 468 301 18 8 454 13 450 2.80e-23 102
MS.gene69838.t1 AT5G66690 24.835 455 296 17 8 435 7 442 5.65e-23 101
MS.gene69838.t1 AT5G14860 24.486 486 324 18 1 454 1 475 7.00e-23 101
MS.gene69838.t1 AT2G30140 24.684 474 299 19 8 456 13 453 8.13e-23 100
MS.gene69838.t1 AT2G36970 29.825 228 148 6 215 437 229 449 2.70e-22 99.8
MS.gene69838.t1 AT2G43820 24.153 472 287 17 8 449 7 437 3.15e-22 99.4
MS.gene69838.t1 AT2G30150 23.810 483 308 20 4 458 6 456 6.30e-22 98.6
MS.gene69838.t1 AT2G43840 32.632 190 118 4 259 448 257 436 7.09e-22 98.2
MS.gene69838.t1 AT2G43840 32.632 190 118 4 259 448 257 436 7.29e-22 98.2
MS.gene69838.t1 AT4G15280 31.064 235 141 5 241 456 275 507 7.77e-22 98.6
MS.gene69838.t1 AT3G46670 25.850 441 288 19 2 427 3 419 7.82e-22 98.2
MS.gene69838.t1 AT4G15280 31.064 235 141 5 241 456 243 475 9.02e-22 98.2
MS.gene69838.t1 AT4G15550 22.678 463 312 14 2 436 7 451 1.58e-21 97.4
MS.gene69838.t1 AT1G07250 28.571 231 153 6 236 456 246 474 1.68e-21 97.4
MS.gene69838.t1 AT2G29730 25.054 463 285 19 7 433 4 440 4.22e-21 95.9
MS.gene69838.t1 AT4G15260 30.085 236 143 6 241 456 123 356 4.85e-21 94.7
MS.gene69838.t1 AT2G36790 26.866 469 287 20 2 428 7 461 5.71e-21 95.9
MS.gene69838.t1 AT3G21760 32.292 192 112 5 257 432 269 458 7.93e-21 95.5
MS.gene69838.t1 AT3G21560 24.675 462 296 16 4 434 8 448 1.45e-20 94.7
MS.gene69838.t1 AT5G26310 29.767 215 131 4 236 435 233 442 2.07e-20 94.0
MS.gene69838.t1 AT3G21800 30.698 215 130 4 257 454 263 475 2.10e-20 94.0
MS.gene69838.t1 AT1G01390 34.694 196 111 5 248 428 248 441 3.77e-20 93.2
MS.gene69838.t1 AT4G15480 32.609 184 117 6 254 434 275 454 4.14e-20 93.2
MS.gene69838.t1 AT1G01390 34.694 196 111 5 248 428 265 458 4.51e-20 93.2
MS.gene69838.t1 AT2G30150 23.567 471 303 19 13 458 2 440 4.55e-20 92.8
MS.gene69838.t1 AT3G21750 28.216 241 151 5 236 456 232 470 4.71e-20 92.8
MS.gene69838.t1 AT1G07240 29.787 329 188 13 134 435 144 456 7.22e-20 92.4
MS.gene69838.t1 AT3G11340 24.439 446 282 17 9 434 10 420 8.98e-20 92.0
MS.gene69838.t1 AT3G21790 29.876 241 145 6 236 454 240 478 9.18e-20 92.0
MS.gene69838.t1 AT5G59580 25.161 465 304 20 8 454 9 447 1.41e-19 91.3
MS.gene69838.t1 AT5G59590 24.894 470 301 22 8 458 10 446 1.59e-19 91.3
MS.gene69838.t1 AT4G15500 32.778 180 111 6 257 434 267 438 3.12e-19 90.5
MS.gene69838.t1 AT4G15490 22.391 460 313 13 1 434 1 442 3.96e-19 90.1
MS.gene69838.t1 AT3G21780 30.093 216 133 5 257 456 257 470 4.37e-19 90.1
MS.gene69838.t1 AT5G05880 28.194 227 147 8 207 425 200 418 6.30e-19 89.4
MS.gene69838.t1 AT1G07260 29.258 229 150 6 236 454 245 471 6.56e-19 89.4
MS.gene69838.t1 AT1G24100 30.208 192 125 4 257 448 266 448 6.60e-19 89.4
MS.gene69838.t1 AT3G16520 29.767 215 138 5 236 446 242 447 1.03e-18 88.6
MS.gene69838.t1 AT5G05860 24.385 447 290 16 7 435 8 424 1.74e-18 88.2
MS.gene69838.t1 AT5G05870 29.114 237 152 7 206 435 204 431 1.97e-18 87.8
MS.gene69838.t1 AT3G16520 30.392 204 129 5 236 435 242 436 3.16e-18 87.4
MS.gene69838.t1 AT3G16520 30.392 204 129 5 236 435 242 436 3.23e-18 87.0
MS.gene69838.t1 AT5G05890 27.572 243 161 8 199 434 196 430 5.73e-18 86.7
MS.gene69838.t1 AT5G38040 26.386 451 273 21 16 442 18 433 6.38e-18 86.3
MS.gene69838.t1 AT3G46660 24.390 451 308 18 2 440 8 437 1.21e-17 85.5
MS.gene69838.t1 AT1G06000 23.058 412 245 12 8 394 10 374 1.31e-17 85.1
MS.gene69838.t1 AT2G29740 30.846 201 129 6 236 428 250 448 1.49e-17 85.5
MS.gene69838.t1 AT2G29710 31.351 185 110 6 257 433 265 440 6.54e-17 83.2
MS.gene69838.t1 AT3G55700 30.732 205 127 7 246 445 246 440 6.83e-17 83.2
MS.gene69838.t1 AT3G22250 32.222 180 96 8 257 428 274 435 7.44e-17 83.2
MS.gene69838.t1 AT1G05560 28.700 223 138 7 241 448 275 491 9.26e-17 83.2
MS.gene69838.t1 AT1G05560 28.700 223 138 7 241 448 225 441 1.10e-16 82.8
MS.gene69838.t1 AT3G55710 35.000 140 86 4 259 396 263 399 1.73e-16 82.0
MS.gene69838.t1 AT1G05530 25.483 259 165 7 219 455 203 455 1.98e-16 81.6
MS.gene69838.t1 AT2G29750 30.978 184 121 5 249 428 267 448 3.67e-16 80.9
MS.gene69838.t1 AT4G14090 29.146 199 130 7 253 448 255 445 8.02e-16 79.7
MS.gene69838.t1 AT2G23260 28.492 179 120 5 257 435 260 430 8.32e-16 79.7
MS.gene69838.t1 AT2G23250 29.609 179 118 5 257 435 242 412 8.92e-16 79.7
MS.gene69838.t1 AT1G78270 29.570 186 118 6 253 436 283 457 1.92e-15 79.0
MS.gene69838.t1 AT5G05900 23.932 468 296 20 1 436 1 440 2.21e-15 78.6
MS.gene69838.t1 AT1G22400 29.891 184 119 5 253 436 285 458 3.86e-15 77.8
MS.gene69838.t1 AT3G46720 23.928 443 274 17 8 427 9 411 4.17e-15 77.8
MS.gene69838.t1 AT1G22360 29.348 184 120 5 253 436 281 454 5.07e-15 77.4
MS.gene69838.t1 AT5G38010 24.946 461 287 19 8 442 10 437 6.86e-15 77.0
MS.gene69838.t1 AT3G02100 23.241 469 284 19 8 440 13 441 8.15e-15 76.6
MS.gene69838.t1 AT2G28080 26.415 212 144 6 213 416 227 434 2.75e-14 75.1
MS.gene69838.t1 AT5G17050 27.933 179 114 6 257 434 268 432 3.37e-14 74.7
MS.gene69838.t1 AT5G17030 26.087 230 150 8 210 433 215 430 1.95e-13 72.4
MS.gene69838.t1 AT1G22380 28.804 184 121 5 253 436 284 457 2.73e-13 72.0
MS.gene69838.t1 AT1G22340 27.222 180 122 4 257 436 288 458 2.82e-13 72.0
MS.gene69838.t1 AT2G26480 25.806 248 158 9 208 445 196 427 2.82e-13 72.0
MS.gene69838.t1 AT1G22360 28.261 184 110 6 253 436 281 442 3.45e-12 68.6
MS.gene69838.t1 AT5G17040 26.111 180 120 5 257 436 251 417 7.33e-12 67.4
MS.gene69838.t1 AT5G17040 26.111 180 120 5 257 436 149 315 1.11e-11 66.2

Find 92 sgRNAs with CRISPR-Local

Find 109 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAAAACCTGTTCTGCTTTC+AGG 0.078488 2.2:-13906371 MS.gene69838:CDS
AGTGATGAGTTCAAAATTTA+TGG 0.097757 2.2:-13905925 MS.gene69838:CDS
AAAGGAAAAGGGATTGTTTA+TGG 0.177110 2.2:-13906101 MS.gene69838:CDS
TCCTCTAGTGTTGTATTTGT+TGG 0.233370 2.2:+13906332 None:intergenic
ATCACAGTTCCTCATGTTAA+TGG 0.256113 2.2:-13906881 MS.gene69838:CDS
TCAACTTTGGAAGCCAATAT+TGG 0.275061 2.2:+13906720 None:intergenic
AACTTCTTCTCAAGGAAATA+AGG 0.277035 2.2:-13906766 MS.gene69838:CDS
ATCCTTTCATTGAACCCTTC+AGG 0.299605 2.2:+13906125 None:intergenic
TTGCTTGGTCTTGAGTTAAC+AGG 0.300933 2.2:-13906209 MS.gene69838:CDS
AAAATGGATTTCATGGCTTA+AGG 0.310467 2.2:-13906309 MS.gene69838:CDS
CCAAGATAAGCTGTGGATAC+TGG 0.319952 2.2:+13906653 None:intergenic
AAGGGATTGTTTATGGAAGT+TGG 0.335805 2.2:-13906094 MS.gene69838:CDS
GGGTTCAATGAAAGGATAAA+AGG 0.342906 2.2:-13906119 MS.gene69838:CDS
GGGACAAAGGTAATAAGATT+TGG 0.347167 2.2:+13906905 None:intergenic
TAAAACTTGATGCAAGAATC+AGG 0.354611 2.2:+13906560 None:intergenic
GTTCAATATCCTTCTCTGTT+TGG 0.364016 2.2:+13906786 None:intergenic
TTGTTGGAGAGGTGAAGATA+TGG 0.378348 2.2:+13907007 None:intergenic
GCAGCACTTAAGCCACCTAT+TGG 0.380205 2.2:-13906173 MS.gene69838:CDS
TTAACATGAGGAACTGTGAT+AGG 0.385255 2.2:+13906884 None:intergenic
GGCTTAAGTGCTGCAAGAAA+TGG 0.387827 2.2:+13906182 None:intergenic
AAATGGATTTCATGGCTTAA+GGG 0.393977 2.2:-13906308 MS.gene69838:CDS
ACCTCTTAATGCTAACTTGT+TGG 0.399917 2.2:+13906991 None:intergenic
TCAATTGACTCAAATCCAAT+AGG 0.400322 2.2:+13906158 None:intergenic
CCAGTATCCACAGCTTATCT+TGG 0.402654 2.2:-13906653 MS.gene69838:CDS
ATCCTTCTCTGTTTGGTCCA+TGG 0.404687 2.2:+13906793 None:intergenic
CAGTTTCAAGAGTTGTTGCT+TGG 0.416604 2.2:-13906224 MS.gene69838:CDS
AGTGTTGTATTTGTTGGCTC+AGG 0.421458 2.2:+13906338 None:intergenic
ATGAGGTTGGAAAAGAAGTA+AGG 0.423482 2.2:-13905812 MS.gene69838:CDS
AATAAGAGGGACTAAAGAAA+AGG 0.434353 2.2:+13906823 None:intergenic
AATGAAAGGATAAAAGGAAA+AGG 0.439943 2.2:-13906113 MS.gene69838:CDS
ACAACCTCTGCAGATGCAAT+TGG 0.447132 2.2:-13906452 MS.gene69838:CDS
AATGTTTCCATGGTTTGCTA+TGG 0.456397 2.2:-13907041 MS.gene69838:CDS
TCCATGGCTGTAGCAATAAG+AGG 0.461979 2.2:+13906809 None:intergenic
ATGAAAGGATAAAAGGAAAA+GGG 0.462020 2.2:-13906112 MS.gene69838:CDS
ATTCTAGAACACCCTTCTGT+TGG 0.466558 2.2:-13906056 MS.gene69838:CDS
TTGAAGAAGCTTTACCTGAA+GGG 0.470265 2.2:-13906139 MS.gene69838:CDS
CTGGTGTTGTTGCCACGTCT+TGG 0.470989 2.2:-13905972 MS.gene69838:CDS
ACAGGACCTGAAAGCAGAAC+AGG 0.471617 2.2:+13906365 None:intergenic
CTGGAGTCAATATAATGTAT+TGG 0.483981 2.2:+13906672 None:intergenic
TCCAACAAGTTAGCATTAAG+AGG 0.486768 2.2:-13906992 MS.gene69838:CDS
AAATCAAAGAAAACTATTTG+TGG 0.487198 2.2:+13906743 None:intergenic
ATGGATGATGAGAATGAGGT+TGG 0.487478 2.2:-13905825 MS.gene69838:CDS
AAAATTTCCTTGTTGAAGCT+AGG 0.487842 2.2:+13906519 None:intergenic
TACCTGAAGGGTTCAATGAA+AGG 0.490078 2.2:-13906127 MS.gene69838:CDS
GCAGATGCAATTGGTTTCAA+AGG 0.495490 2.2:-13906443 MS.gene69838:CDS
GTTGAGAAAGGTGATGAAGA+TGG 0.504202 2.2:-13905891 MS.gene69838:CDS
ATGTTTCCATGGTTTGCTAT+GGG 0.504571 2.2:-13907040 MS.gene69838:CDS
GGAAACATTGCTATGTGTAA+AGG 0.506531 2.2:+13907055 None:intergenic
TACACATAGCAATGTTTCCA+TGG 0.507754 2.2:-13907051 MS.gene69838:CDS
TGTTGGAGAGGTGAAGATAT+GGG 0.518669 2.2:+13907008 None:intergenic
TTCAAAATTTATGGTTGGTG+TGG 0.519370 2.2:-13905916 MS.gene69838:CDS
GGATATTGAACTTCTTCTCA+AGG 0.527735 2.2:-13906774 MS.gene69838:CDS
CCCTCTTATTGCTACAGCCA+TGG 0.534700 2.2:-13906810 MS.gene69838:CDS
ATAAGAGGGACTAAAGAAAA+GGG 0.535599 2.2:+13906824 None:intergenic
ATTGAAGAAGCTTTACCTGA+AGG 0.539878 2.2:-13906140 MS.gene69838:CDS
GATCTCATGAAACCGCCTGC+AGG 0.541019 2.2:-13906587 MS.gene69838:CDS
AAAGGTTGCAATGAAATCGA+TGG 0.551346 2.2:-13906425 MS.gene69838:CDS
TAAAGGAGAAGGAGCATCCA+TGG 0.554316 2.2:+13907072 None:intergenic
TTATTCGATCGTTTGCACAT+AGG 0.554804 2.2:-13906476 MS.gene69838:CDS
CAAGAATCAGGAAAACCTGC+AGG 0.555559 2.2:+13906572 None:intergenic
TGGAGCTGCTTCTATAACTG+AGG 0.562901 2.2:-13906015 MS.gene69838:CDS
TGAGGTTGGAAAAGAAGTAA+GGG 0.563327 2.2:-13905811 MS.gene69838:CDS
ACTTGTTAACACGTGTCAGC+TGG 0.567449 2.2:-13905991 MS.gene69838:CDS
ATGAGTTCAAAATTTATGGT+TGG 0.568022 2.2:-13905921 MS.gene69838:CDS
ATTGCTATGTGTAAAGGAGA+AGG 0.577456 2.2:+13907061 None:intergenic
TAACATGAGGAACTGTGATA+GGG 0.579312 2.2:+13906885 None:intergenic
ATGTTTCTGCATCATGTGGA+AGG 0.581236 2.2:+13906858 None:intergenic
GAAACCAATTGCATCTGCAG+AGG 0.585035 2.2:+13906448 None:intergenic
TCTTGCATTCATGATATGAT+CGG 0.585265 2.2:+13905947 None:intergenic
TGTGATGGATGATGAGAATG+AGG 0.586203 2.2:-13905829 MS.gene69838:CDS
GTTATGAAACATCCAACAGA+AGG 0.588945 2.2:+13906044 None:intergenic
ATTGACTCAAATCCAATAGG+TGG 0.595901 2.2:+13906161 None:intergenic
TTAATGCTAACTTGTTGGAG+AGG 0.601672 2.2:+13906996 None:intergenic
GTTTCAATATAATCAGCATA+CGG 0.609203 2.2:+13906401 None:intergenic
TAAACATCCAAGATAAGCTG+TGG 0.613726 2.2:+13906646 None:intergenic
GAAGATGTTTCTGCATCATG+TGG 0.620712 2.2:+13906854 None:intergenic
AGGAACTGTGATAGGGACAA+AGG 0.624768 2.2:+13906892 None:intergenic
TTCGATTCCTAGCTTCAACA+AGG 0.628026 2.2:-13906526 MS.gene69838:CDS
CCATGGCTGTAGCAATAAGA+GGG 0.636758 2.2:+13906810 None:intergenic
GTTGGTGTGGAAGTTGAGAA+AGG 0.637430 2.2:-13905903 MS.gene69838:CDS
AAGTGTCCCATAGCAAACCA+TGG 0.639716 2.2:+13907034 None:intergenic
GCCAACAAATACAACACTAG+AGG 0.646740 2.2:-13906333 MS.gene69838:CDS
GGAGCTGCTTCTATAACTGA+GGG 0.647559 2.2:-13906014 MS.gene69838:CDS
AGCCATGGACCAAACAGAGA+AGG 0.647882 2.2:-13906795 MS.gene69838:CDS
TTTGTTGGCTCAGGTAACAC+AGG 0.651671 2.2:+13906347 None:intergenic
CAAAGCTGTGAAGATTGTGA+TGG 0.655994 2.2:-13905844 MS.gene69838:CDS
GTTGGAGAGGTGAAGATATG+GGG 0.667052 2.2:+13907009 None:intergenic
TGTGGAAGGCCATTAACATG+AGG 0.687192 2.2:+13906872 None:intergenic
ATATGATCGGAACCAAGACG+TGG 0.688479 2.2:+13905960 None:intergenic
GAATCAGGAAAACCTGCAGG+CGG 0.688768 2.2:+13906575 None:intergenic
TTATGAAACATCCAACAGAA+GGG 0.698749 2.2:+13906045 None:intergenic
GGATGTTTCATAACACACTG+TGG 0.766209 2.2:-13906035 MS.gene69838:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATCAAAGAAAACTATTTG+TGG + chr2.2:13906046-13906065 None:intergenic 20.0%
!!! CAATAAAAAGTTTCTCATTT+TGG + chr2.2:13907010-13907029 None:intergenic 20.0%
!!! GATTATATTGAAACAGTTTT+TGG - chr2.2:13906394-13906413 MS.gene69838:CDS 20.0%
!!! TCAACAAGGAAATTTTTATT+TGG - chr2.2:13906274-13906293 MS.gene69838:CDS 20.0%
!!! TTTTCTTTGATTTCCAATAT+TGG - chr2.2:13906053-13906072 MS.gene69838:CDS 20.0%
! AATGAAAGGATAAAAGGAAA+AGG - chr2.2:13906673-13906692 MS.gene69838:CDS 25.0%
! AGTGATGAGTTCAAAATTTA+TGG - chr2.2:13906861-13906880 MS.gene69838:CDS 25.0%
! ATGAAAGGATAAAAGGAAAA+GGG - chr2.2:13906674-13906693 MS.gene69838:CDS 25.0%
! ATGAGTTCAAAATTTATGGT+TGG - chr2.2:13906865-13906884 MS.gene69838:CDS 25.0%
! GTTTACAAAAACTAAGTCTA+GGG - chr2.2:13906158-13906177 MS.gene69838:CDS 25.0%
! GTTTCAATATAATCAGCATA+CGG + chr2.2:13906388-13906407 None:intergenic 25.0%
! TGTTTACAAAAACTAAGTCT+AGG - chr2.2:13906157-13906176 MS.gene69838:CDS 25.0%
!!! AACTTGTTGAGTGTATTTTT+AGG + chr2.2:13905842-13905861 None:intergenic 25.0%
!!! AGGAAATTTTTATTTGGAAG+TGG - chr2.2:13906280-13906299 MS.gene69838:CDS 25.0%
!!! TGAAACTGATTTTGTTCTAA+TGG + chr2.2:13906550-13906569 None:intergenic 25.0%
AAAATTTCCTTGTTGAAGCT+AGG + chr2.2:13906270-13906289 None:intergenic 30.0%
AAAGGAAAAGGGATTGTTTA+TGG - chr2.2:13906685-13906704 MS.gene69838:CDS 30.0%
AACTTCTTCTCAAGGAAATA+AGG - chr2.2:13906020-13906039 MS.gene69838:CDS 30.0%
AATAAGAGGGACTAAAGAAA+AGG + chr2.2:13905966-13905985 None:intergenic 30.0%
ATAAGAGGGACTAAAGAAAA+GGG + chr2.2:13905965-13905984 None:intergenic 30.0%
ATACAACACTAGAGGAAAAA+TGG - chr2.2:13906461-13906480 MS.gene69838:CDS 30.0%
CTGGAGTCAATATAATGTAT+TGG + chr2.2:13906117-13906136 None:intergenic 30.0%
TAAAACTTGATGCAAGAATC+AGG + chr2.2:13906229-13906248 None:intergenic 30.0%
TCTTGCATTCATGATATGAT+CGG + chr2.2:13906842-13906861 None:intergenic 30.0%
TTATGAAACATCCAACAGAA+GGG + chr2.2:13906744-13906763 None:intergenic 30.0%
! AAAATGGATTTCATGGCTTA+AGG - chr2.2:13906477-13906496 MS.gene69838:CDS 30.0%
! AAATGGATTTCATGGCTTAA+GGG - chr2.2:13906478-13906497 MS.gene69838:CDS 30.0%
! TAGAGGAAAAATGGATTTCA+TGG - chr2.2:13906470-13906489 MS.gene69838:CDS 30.0%
! TCAATTGACTCAAATCCAAT+AGG + chr2.2:13906631-13906650 None:intergenic 30.0%
! TTCAAAATTTATGGTTGGTG+TGG - chr2.2:13906870-13906889 MS.gene69838:CDS 30.0%
AAAGGTTGCAATGAAATCGA+TGG - chr2.2:13906361-13906380 MS.gene69838:CDS 35.0%
AAGGGATTGTTTATGGAAGT+TGG - chr2.2:13906692-13906711 MS.gene69838:CDS 35.0%
ATCACAGTTCCTCATGTTAA+TGG - chr2.2:13905905-13905924 MS.gene69838:CDS 35.0%
ATGAGGTTGGAAAAGAAGTA+AGG - chr2.2:13906974-13906993 MS.gene69838:CDS 35.0%
ATTGAAGAAGCTTTACCTGA+AGG - chr2.2:13906646-13906665 MS.gene69838:CDS 35.0%
ATTGCTATGTGTAAAGGAGA+AGG + chr2.2:13905728-13905747 None:intergenic 35.0%
CCAAAGTTGACTAAAAACCT+TGG - chr2.2:13906079-13906098 MS.gene69838:CDS 35.0%
GGAAACATTGCTATGTGTAA+AGG + chr2.2:13905734-13905753 None:intergenic 35.0%
GGATATTGAACTTCTTCTCA+AGG - chr2.2:13906012-13906031 MS.gene69838:CDS 35.0%
GGGACAAAGGTAATAAGATT+TGG + chr2.2:13905884-13905903 None:intergenic 35.0%
GGGTTCAATGAAAGGATAAA+AGG - chr2.2:13906667-13906686 MS.gene69838:CDS 35.0%
GTTATGAAACATCCAACAGA+AGG + chr2.2:13906745-13906764 None:intergenic 35.0%
GTTCAATATCCTTCTCTGTT+TGG + chr2.2:13906003-13906022 None:intergenic 35.0%
TAAACATCCAAGATAAGCTG+TGG + chr2.2:13906143-13906162 None:intergenic 35.0%
TAACATGAGGAACTGTGATA+GGG + chr2.2:13905904-13905923 None:intergenic 35.0%
TACACATAGCAATGTTTCCA+TGG - chr2.2:13905735-13905754 MS.gene69838:CDS 35.0%
TCCAACAAGTTAGCATTAAG+AGG - chr2.2:13905794-13905813 MS.gene69838:CDS 35.0%
TCCTCTAGTGTTGTATTTGT+TGG + chr2.2:13906457-13906476 None:intergenic 35.0%
TGAGGTTGGAAAAGAAGTAA+GGG - chr2.2:13906975-13906994 MS.gene69838:CDS 35.0%
TGGCTTAAGGGATTCAAAAA+TGG - chr2.2:13906490-13906509 MS.gene69838:CDS 35.0%
TTAACATGAGGAACTGTGAT+AGG + chr2.2:13905905-13905924 None:intergenic 35.0%
TTATTCGATCGTTTGCACAT+AGG - chr2.2:13906310-13906329 MS.gene69838:CDS 35.0%
TTGAAGAAGCTTTACCTGAA+GGG - chr2.2:13906647-13906666 MS.gene69838:CDS 35.0%
! ACCTCTTAATGCTAACTTGT+TGG + chr2.2:13905798-13905817 None:intergenic 35.0%
! ATTGACTCAAATCCAATAGG+TGG + chr2.2:13906628-13906647 None:intergenic 35.0%
! TCAACTTTGGAAGCCAATAT+TGG + chr2.2:13906069-13906088 None:intergenic 35.0%
! TTTTGTGCATATGGAAGTGA+AGG - chr2.2:13906523-13906542 MS.gene69838:CDS 35.0%
!! AATGTTTCCATGGTTTGCTA+TGG - chr2.2:13905745-13905764 MS.gene69838:CDS 35.0%
!! ATGTTTCCATGGTTTGCTAT+GGG - chr2.2:13905746-13905765 MS.gene69838:CDS 35.0%
!! TTAATGCTAACTTGTTGGAG+AGG + chr2.2:13905793-13905812 None:intergenic 35.0%
!!! CCAAGGTTTTTAGTCAACTT+TGG + chr2.2:13906082-13906101 None:intergenic 35.0%
!!! TCTGTGGTTTTTTGTGCATA+TGG - chr2.2:13906514-13906533 MS.gene69838:CDS 35.0%
ATCCTTTCATTGAACCCTTC+AGG + chr2.2:13906664-13906683 None:intergenic 40.0%
ATGGATGATGAGAATGAGGT+TGG - chr2.2:13906961-13906980 MS.gene69838:CDS 40.0%
CAAAGCTGTGAAGATTGTGA+TGG - chr2.2:13906942-13906961 MS.gene69838:CDS 40.0%
CAGTTTCAAGAGTTGTTGCT+TGG - chr2.2:13906562-13906581 MS.gene69838:CDS 40.0%
GCCAACAAATACAACACTAG+AGG - chr2.2:13906453-13906472 MS.gene69838:CDS 40.0%
GGATGTTTCATAACACACTG+TGG - chr2.2:13906751-13906770 MS.gene69838:CDS 40.0%
GTTGAGAAAGGTGATGAAGA+TGG - chr2.2:13906895-13906914 MS.gene69838:CDS 40.0%
TACCTGAAGGGTTCAATGAA+AGG - chr2.2:13906659-13906678 MS.gene69838:CDS 40.0%
TGTTGGAGAGGTGAAGATAT+GGG + chr2.2:13905781-13905800 None:intergenic 40.0%
TTCGATTCCTAGCTTCAACA+AGG - chr2.2:13906260-13906279 MS.gene69838:CDS 40.0%
TTGTTGGAGAGGTGAAGATA+TGG + chr2.2:13905782-13905801 None:intergenic 40.0%
! ATGTTTCTGCATCATGTGGA+AGG + chr2.2:13905931-13905950 None:intergenic 40.0%
! ATTGGAGACTTTTGATGCCA+AGG + chr2.2:13906099-13906118 None:intergenic 40.0%
! GAAGATGTTTCTGCATCATG+TGG + chr2.2:13905935-13905954 None:intergenic 40.0%
! GCAGATGCAATTGGTTTCAA+AGG - chr2.2:13906343-13906362 MS.gene69838:CDS 40.0%
! GGGATTCAAAAATGGTTCTG+TGG - chr2.2:13906498-13906517 MS.gene69838:CDS 40.0%
!! AGTGTTGTATTTGTTGGCTC+AGG + chr2.2:13906451-13906470 None:intergenic 40.0%
!! ATTCTAGAACACCCTTCTGT+TGG - chr2.2:13906730-13906749 MS.gene69838:CDS 40.0%
!! TGTGATGGATGATGAGAATG+AGG - chr2.2:13906957-13906976 MS.gene69838:CDS 40.0%
!! TTGCTTGGTCTTGAGTTAAC+AGG - chr2.2:13906577-13906596 MS.gene69838:CDS 40.0%
AAGTGTCCCATAGCAAACCA+TGG + chr2.2:13905755-13905774 None:intergenic 45.0%
ACAACCTCTGCAGATGCAAT+TGG - chr2.2:13906334-13906353 MS.gene69838:CDS 45.0%
AGGAACTGTGATAGGGACAA+AGG + chr2.2:13905897-13905916 None:intergenic 45.0%
ATATGATCGGAACCAAGACG+TGG + chr2.2:13906829-13906848 None:intergenic 45.0%
ATCCTTCTCTGTTTGGTCCA+TGG + chr2.2:13905996-13906015 None:intergenic 45.0%
CAAGAATCAGGAAAACCTGC+AGG + chr2.2:13906217-13906236 None:intergenic 45.0%
CCAAGATAAGCTGTGGATAC+TGG + chr2.2:13906136-13906155 None:intergenic 45.0%
CCAGTATCCACAGCTTATCT+TGG - chr2.2:13906133-13906152 MS.gene69838:CDS 45.0%
CCATGGCTGTAGCAATAAGA+GGG + chr2.2:13905979-13905998 None:intergenic 45.0%
GAAACCAATTGCATCTGCAG+AGG + chr2.2:13906341-13906360 None:intergenic 45.0%
GGAAAACCTGTTCTGCTTTC+AGG - chr2.2:13906415-13906434 MS.gene69838:CDS 45.0%
GGAGCTGCTTCTATAACTGA+GGG - chr2.2:13906772-13906791 MS.gene69838:CDS 45.0%
GTTGGAGAGGTGAAGATATG+GGG + chr2.2:13905780-13905799 None:intergenic 45.0%
GTTGGTGTGGAAGTTGAGAA+AGG - chr2.2:13906883-13906902 MS.gene69838:CDS 45.0%
TCCATGGCTGTAGCAATAAG+AGG + chr2.2:13905980-13905999 None:intergenic 45.0%
TGGAGCTGCTTCTATAACTG+AGG - chr2.2:13906771-13906790 MS.gene69838:CDS 45.0%
TGTGGAAGGCCATTAACATG+AGG + chr2.2:13905917-13905936 None:intergenic 45.0%
! ACTTGTTAACACGTGTCAGC+TGG - chr2.2:13906795-13906814 MS.gene69838:CDS 45.0%
! GGCTTAAGTGCTGCAAGAAA+TGG + chr2.2:13906607-13906626 None:intergenic 45.0%
!! TTTGTTGGCTCAGGTAACAC+AGG + chr2.2:13906442-13906461 None:intergenic 45.0%
ACAGGACCTGAAAGCAGAAC+AGG + chr2.2:13906424-13906443 None:intergenic 50.0%
AGCCATGGACCAAACAGAGA+AGG - chr2.2:13905991-13906010 MS.gene69838:CDS 50.0%
CCCTCTTATTGCTACAGCCA+TGG - chr2.2:13905976-13905995 MS.gene69838:CDS 50.0%
GAATCAGGAAAACCTGCAGG+CGG + chr2.2:13906214-13906233 None:intergenic 50.0%
GCAGCACTTAAGCCACCTAT+TGG - chr2.2:13906613-13906632 MS.gene69838:CDS 50.0%
GATCTCATGAAACCGCCTGC+AGG - chr2.2:13906199-13906218 MS.gene69838:CDS 55.0%
!! CTGGTGTTGTTGCCACGTCT+TGG - chr2.2:13906814-13906833 MS.gene69838:CDS 55.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 13905716 13907092 13905716 ID=MS.gene69838
chr2.2 mRNA 13905716 13907092 13905716 ID=MS.gene69838.t1;Parent=MS.gene69838
chr2.2 exon 13905716 13907092 13905716 ID=MS.gene69838.t1.exon1;Parent=MS.gene69838.t1
chr2.2 CDS 13905716 13907092 13905716 ID=cds.MS.gene69838.t1;Parent=MS.gene69838.t1
Gene Sequence

>MS.gene69838

ATGGATGCTCCTTCTCCTTTACACATAGCAATGTTTCCATGGTTTGCTATGGGACACTTCACCCCATATCTTCACCTCTCCAACAAGTTAGCATTAAGAGGTCACAAAATATCATTCTTCATACCTAAAAATACACTCAACAAGTTACAACATCTCAATCTTCATCCAAATCTTATTACCTTTGTCCCTATCACAGTTCCTCATGTTAATGGCCTTCCACATGATGCAGAAACATCTTCTGATGTACCCTTTTCTTTAGTCCCTCTTATTGCTACAGCCATGGACCAAACAGAGAAGGATATTGAACTTCTTCTCAAGGAAATAAGGCCACAAATAGTTTTCTTTGATTTCCAATATTGGCTTCCAAAGTTGACTAAAAACCTTGGCATCAAAAGTCTCCAATACATTATATTGACTCCAGTATCCACAGCTTATCTTGGATGTTTACAAAAACTAAGTCTAGGGAAAGATTTAACTGAAGTTGATCTCATGAAACCGCCTGCAGGTTTTCCTGATTCTTGCATCAAGTTTTATAAACACGAACTTCGATTCCTAGCTTCAACAAGGAAATTTTTATTTGGAAGTGGTGTTTTTTTATTCGATCGTTTGCACATAGGTACAACCTCTGCAGATGCAATTGGTTTCAAAGGTTGCAATGAAATCGATGGACCGTATGCTGATTATATTGAAACAGTTTTTGGAAAACCTGTTCTGCTTTCAGGTCCTGTGTTACCTGAGCCAACAAATACAACACTAGAGGAAAAATGGATTTCATGGCTTAAGGGATTCAAAAATGGTTCTGTGGTTTTTTGTGCATATGGAAGTGAAGGTCCATTAGAACAAAATCAGTTTCAAGAGTTGTTGCTTGGTCTTGAGTTAACAGGTTTTCCATTTCTTGCAGCACTTAAGCCACCTATTGGATTTGAGTCAATTGAAGAAGCTTTACCTGAAGGGTTCAATGAAAGGATAAAAGGAAAAGGGATTGTTTATGGAAGTTGGATTCAACAACAATTGATTCTAGAACACCCTTCTGTTGGATGTTTCATAACACACTGTGGAGCTGCTTCTATAACTGAGGGACTTGTTAACACGTGTCAGCTGGTGTTGTTGCCACGTCTTGGTTCCGATCATATCATGAATGCAAGAGTGATGAGTTCAAAATTTATGGTTGGTGTGGAAGTTGAGAAAGGTGATGAAGATGGATTGTTTACAAAAGAAAGTGTGTGCAAAGCTGTGAAGATTGTGATGGATGATGAGAATGAGGTTGGAAAAGAAGTAAGGGAAAATCATGCCAAAATGAGAAACTTTTTATTGTGCAGCAATTTAGAATCTTCATGTGTTGATAGTTTCTGTCAAAAACTTTATGATTTGCTCTAG
Protein sequence

>MS.gene69838.t1

MDAPSPLHIAMFPWFAMGHFTPYLHLSNKLALRGHKISFFIPKNTLNKLQHLNLHPNLITFVPITVPHVNGLPHDAETSSDVPFSLVPLIATAMDQTEKDIELLLKEIRPQIVFFDFQYWLPKLTKNLGIKSLQYIILTPVSTAYLGCLQKLSLGKDLTEVDLMKPPAGFPDSCIKFYKHELRFLASTRKFLFGSGVFLFDRLHIGTTSADAIGFKGCNEIDGPYADYIETVFGKPVLLSGPVLPEPTNTTLEEKWISWLKGFKNGSVVFCAYGSEGPLEQNQFQELLLGLELTGFPFLAALKPPIGFESIEEALPEGFNERIKGKGIVYGSWIQQQLILEHPSVGCFITHCGAASITEGLVNTCQLVLLPRLGSDHIMNARVMSSKFMVGVEVEKGDEDGLFTKESVCKAVKIVMDDENEVGKEVRENHAKMRNFLLCSNLESSCVDSFCQKLYDLL