AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene065243


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene065243.t1 MTR_2g083480 93.231 458 31 0 1 458 1 458 0.0 869
MS.gene065243.t1 MTR_2g083420 79.258 458 71 1 1 458 1 434 0.0 748
MS.gene065243.t1 MTR_2g083390 78.603 458 74 1 1 458 1 434 0.0 740
MS.gene065243.t1 MTR_2g083430 78.384 458 99 0 1 458 1 458 0.0 720
MS.gene065243.t1 MTR_2g083380 67.031 458 151 0 1 458 18 475 0.0 632
MS.gene065243.t1 MTR_2g083490 65.939 458 156 0 1 458 1 458 0.0 624
MS.gene065243.t1 MTR_4g079250 60.652 460 177 3 1 458 1 458 0.0 582
MS.gene065243.t1 MTR_4g079270 60.000 460 180 3 1 458 1 458 0.0 582
MS.gene065243.t1 MTR_2g014900 59.645 451 181 1 8 458 7 456 0.0 555
MS.gene065243.t1 MTR_2g083360 61.810 453 68 4 6 458 27 374 0.0 528
MS.gene065243.t1 MTR_2g086283 47.651 447 122 6 11 457 1 335 1.42e-127 373
MS.gene065243.t1 MTR_1g090270 41.901 463 245 11 7 457 14 464 2.81e-115 347
MS.gene065243.t1 MTR_4g059370 41.411 326 178 6 139 457 72 391 1.56e-80 254
MS.gene065243.t1 MTR_8g068360 32.340 470 297 12 2 458 6 467 6.22e-67 222
MS.gene065243.t1 MTR_8g068330 31.712 473 299 14 1 458 1 464 1.93e-66 220
MS.gene065243.t1 MTR_7g067330 32.096 458 265 14 2 451 3 422 1.69e-64 214
MS.gene065243.t1 MTR_8g068340 31.906 467 296 12 2 454 6 464 2.04e-64 215
MS.gene065243.t1 MTR_2g014930 42.069 290 86 6 17 305 9 217 5.04e-64 206
MS.gene065243.t1 MTR_4g123553 31.818 462 285 14 6 454 13 457 2.95e-63 212
MS.gene065243.t1 MTR_7g067120 33.043 460 258 15 2 451 3 422 4.02e-63 211
MS.gene065243.t1 MTR_2g008225 31.330 466 297 13 2 455 9 463 1.45e-60 205
MS.gene065243.t1 MTR_2g008220 31.545 466 296 14 2 455 8 462 5.09e-60 204
MS.gene065243.t1 MTR_2g008226 32.979 470 283 17 6 454 8 466 1.79e-59 202
MS.gene065243.t1 MTR_4g079280 42.544 228 86 2 11 238 1 183 2.44e-58 190
MS.gene065243.t1 MTR_6g036650 29.873 472 298 14 1 454 11 467 1.12e-55 192
MS.gene065243.t1 MTR_6g042310 30.193 467 284 16 7 454 17 460 2.19e-55 191
MS.gene065243.t1 MTR_2g046620 30.519 462 291 14 6 454 14 458 1.67e-54 189
MS.gene065243.t1 MTR_2g083440 76.471 102 24 0 357 458 11 112 1.14e-48 162
MS.gene065243.t1 MTR_4g077960 28.728 456 285 17 17 454 1 434 4.63e-47 168
MS.gene065243.t1 MTR_1g090280 46.561 189 89 5 261 438 108 295 3.45e-46 162
MS.gene065243.t1 MTR_8g007650 30.085 472 295 17 7 456 6 464 4.51e-45 164
MS.gene065243.t1 MTR_8g007565 30.021 473 294 17 7 456 6 464 6.19e-45 163
MS.gene065243.t1 MTR_5g066410 28.571 469 283 14 11 456 1 440 8.04e-44 159
MS.gene065243.t1 MTR_8g066610 27.862 463 292 14 1 433 1 451 3.92e-36 139
MS.gene065243.t1 MTR_8g071070 27.310 487 301 16 5 457 4 471 2.33e-35 137
MS.gene065243.t1 MTR_2g098430 26.258 457 298 14 9 437 7 452 1.88e-32 129
MS.gene065243.t1 MTR_8g009055 28.791 455 280 18 7 434 5 442 3.29e-31 125
MS.gene065243.t1 MTR_1g062380 27.932 469 282 21 5 432 13 466 2.20e-29 120
MS.gene065243.t1 MTR_6g023665 35.323 201 116 4 241 428 246 445 5.30e-29 119
MS.gene065243.t1 MTR_0009s0240 27.603 413 265 14 5 397 4 402 6.03e-29 119
MS.gene065243.t1 MTR_5g045970 26.767 467 289 15 5 432 13 465 8.66e-29 119
MS.gene065243.t1 MTR_4g031800 25.255 491 304 16 6 458 7 472 8.82e-29 118
MS.gene065243.t1 MTR_5g087620 26.840 462 285 17 8 428 10 459 9.03e-29 119
MS.gene065243.t1 MTR_6g488280 35.821 201 115 4 241 428 239 438 1.76e-28 117
MS.gene065243.t1 MTR_0428s0010 35.821 201 115 4 241 428 239 438 1.76e-28 117
MS.gene065243.t1 MTR_8g009050 28.814 472 258 19 7 434 5 442 2.17e-28 117
MS.gene065243.t1 MTR_3g435310 36.788 193 115 5 258 450 227 412 8.97e-28 115
MS.gene065243.t1 MTR_3g435310 31.618 136 88 4 6 138 16 149 7.00e-15 76.6
MS.gene065243.t1 MTR_7g070660 23.529 442 303 12 7 421 10 443 3.42e-27 114
MS.gene065243.t1 MTR_7g013220 26.623 462 284 19 8 444 5 436 4.52e-27 113
MS.gene065243.t1 MTR_8g009073 27.594 453 286 17 7 434 5 440 1.18e-26 112
MS.gene065243.t1 MTR_0184s0030 34.259 216 120 7 237 435 234 444 1.20e-26 112
MS.gene065243.t1 MTR_0078s0060 28.470 281 171 8 167 436 181 442 2.92e-26 111
MS.gene065243.t1 MTR_6g005600 28.696 345 189 11 123 436 124 442 3.64e-26 110
MS.gene065243.t1 MTR_3g009510 32.719 217 127 5 236 436 241 454 4.17e-26 110
MS.gene065243.t1 MTR_8g006270 28.369 282 170 7 167 435 178 440 4.64e-26 110
MS.gene065243.t1 MTR_4g485620 25.917 436 289 15 22 433 3 428 5.86e-26 110
MS.gene065243.t1 MTR_8g027885 26.875 480 254 19 6 436 16 447 6.11e-26 110
MS.gene065243.t1 MTR_8g012635 31.356 236 140 6 235 452 235 466 8.23e-26 110
MS.gene065243.t1 MTR_8g008990 27.484 473 265 20 7 434 5 444 9.99e-26 109
MS.gene065243.t1 MTR_7g013180 26.116 448 288 14 8 432 5 432 1.38e-25 108
MS.gene065243.t1 MTR_8g027870 26.452 465 275 16 6 436 16 447 1.60e-25 109
MS.gene065243.t1 MTR_4g485630 25.380 461 293 15 7 436 8 448 1.71e-25 108
MS.gene065243.t1 MTR_6g038200 26.477 457 273 20 8 436 11 432 1.89e-25 108
MS.gene065243.t1 MTR_7g117405 28.017 464 276 20 8 433 12 455 2.01e-25 108
MS.gene065243.t1 MTR_8g009073 32.743 226 134 6 223 434 90 311 2.16e-25 106
MS.gene065243.t1 MTR_7g013200 26.116 448 281 16 8 438 5 419 2.78e-25 108
MS.gene065243.t1 MTR_6g033615 30.380 237 143 6 216 434 194 426 3.77e-25 107
MS.gene065243.t1 MTR_4g485590 26.895 409 241 13 8 394 9 381 3.78e-25 107
MS.gene065243.t1 MTR_0184s0040 34.021 194 114 5 253 436 269 458 5.42e-25 107
MS.gene065243.t1 MTR_0078s0190 34.021 194 114 5 253 436 269 458 5.42e-25 107
MS.gene065243.t1 MTR_8g465670 32.536 209 125 4 241 434 239 446 5.46e-25 107
MS.gene065243.t1 MTR_7g070740 24.364 472 289 17 7 433 10 458 6.48e-25 107
MS.gene065243.t1 MTR_8g006730 34.158 202 118 5 241 428 240 440 9.22e-25 107
MS.gene065243.t1 MTR_8g012650 31.390 223 132 5 235 440 235 453 9.55e-25 107
MS.gene065243.t1 MTR_2g046820 34.348 230 137 6 236 454 236 462 9.83e-25 106
MS.gene065243.t1 MTR_7g117170 37.705 183 98 5 257 427 266 444 1.01e-24 107
MS.gene065243.t1 MTR_7g102550 27.097 465 284 19 8 432 9 458 2.15e-24 105
MS.gene065243.t1 MTR_8g466240 27.273 429 251 20 1 398 1 399 2.49e-24 105
MS.gene065243.t1 MTR_6g033725 35.176 199 116 6 241 434 247 437 2.59e-24 105
MS.gene065243.t1 MTR_1g019510 27.412 456 282 20 7 434 5 439 2.84e-24 105
MS.gene065243.t1 MTR_8g012730 31.718 227 136 5 228 440 69 290 2.88e-24 103
MS.gene065243.t1 MTR_6g038230 25.870 460 280 20 8 440 11 436 2.99e-24 105
MS.gene065243.t1 MTR_6g038220 25.439 456 286 17 8 440 11 435 3.20e-24 105
MS.gene065243.t1 MTR_7g070610 23.291 468 300 15 7 433 12 461 6.26e-24 104
MS.gene065243.t1 MTR_1g107350 25.054 463 299 16 1 434 1 444 6.66e-24 104
MS.gene065243.t1 MTR_4g024020 26.247 461 294 17 7 428 8 461 7.11e-24 104
MS.gene065243.t1 MTR_7g102460 26.383 470 279 20 7 428 8 458 7.53e-24 104
MS.gene065243.t1 MTR_8g006710 33.696 184 109 3 257 428 257 439 8.09e-24 103
MS.gene065243.t1 MTR_8g006220 31.797 217 124 5 241 434 238 453 8.49e-24 104
MS.gene065243.t1 MTR_7g046490 32.331 266 148 10 183 435 194 440 1.32e-23 103
MS.gene065243.t1 MTR_5g035580 32.850 207 129 5 252 458 257 453 1.82e-23 103
MS.gene065243.t1 MTR_2g046750 34.348 230 137 6 236 454 239 465 2.18e-23 102
MS.gene065243.t1 MTR_1g019520 34.392 189 109 4 257 434 4 188 2.65e-23 98.2
MS.gene065243.t1 MTR_8g009063 26.087 460 287 18 7 436 12 448 2.91e-23 102
MS.gene065243.t1 MTR_6g033625 33.696 184 116 4 253 434 261 440 3.42e-23 102
MS.gene065243.t1 MTR_5g035560 25.439 456 274 17 7 434 10 427 5.17e-23 102
MS.gene065243.t1 MTR_7g102560 25.255 491 282 17 1 436 1 461 5.41e-23 101
MS.gene065243.t1 MTR_0078s0010 34.375 192 112 5 253 434 254 441 6.19e-23 101
MS.gene065243.t1 MTR_6g038240 32.418 182 112 6 254 435 261 431 1.77e-22 100
MS.gene065243.t1 MTR_8g009067 33.511 188 111 4 257 434 139 322 2.01e-22 98.6
MS.gene065243.t1 MTR_8g009067 33.511 188 111 4 257 434 257 440 2.03e-22 100
MS.gene065243.t1 MTR_7g055710 23.326 463 305 14 7 433 10 458 2.46e-22 99.8
MS.gene065243.t1 MTR_8g077590 28.223 287 167 8 155 428 180 440 2.98e-22 99.4
MS.gene065243.t1 MTR_2g034990 24.342 456 298 15 1 422 4 446 3.58e-22 99.4
MS.gene065243.t1 MTR_8g074550 23.279 494 289 19 1 434 1 464 3.88e-22 99.4
MS.gene065243.t1 MTR_8g012630 31.818 198 117 4 257 440 204 397 3.92e-22 98.6
MS.gene065243.t1 MTR_7g013240 26.339 448 288 19 8 443 6 423 7.69e-22 97.8
MS.gene065243.t1 MTR_8g006260 31.980 197 119 6 259 444 263 455 8.94e-22 98.2
MS.gene065243.t1 MTR_4g117980 24.070 457 292 17 6 424 9 448 9.16e-22 98.2
MS.gene065243.t1 MTR_1g107315 26.697 442 276 17 1 412 1 424 1.00e-21 97.8
MS.gene065243.t1 MTR_7g071040 22.581 465 311 12 5 433 14 465 1.10e-21 97.8
MS.gene065243.t1 MTR_3g069690 32.240 183 115 5 253 434 251 425 1.31e-21 97.4
MS.gene065243.t1 MTR_2g040530 31.034 232 147 5 233 454 236 464 1.56e-21 97.4
MS.gene065243.t1 MTR_7g013260 24.942 433 274 18 8 420 6 407 1.66e-21 97.1
MS.gene065243.t1 MTR_3g049970 26.350 463 289 19 3 434 4 445 1.81e-21 97.1
MS.gene065243.t1 MTR_7g070910 22.629 464 312 13 5 433 8 459 2.03e-21 97.1
MS.gene065243.t1 MTR_5g090610 29.845 258 153 9 206 438 190 444 2.18e-21 96.7
MS.gene065243.t1 MTR_7g047030 33.511 188 111 5 257 434 258 441 2.43e-21 96.7
MS.gene065243.t1 MTR_7g047270 33.511 188 111 5 257 434 258 441 2.43e-21 96.7
MS.gene065243.t1 MTR_5g019580 31.325 249 143 8 232 456 233 477 2.69e-21 96.7
MS.gene065243.t1 MTR_5g098930 28.279 244 150 6 236 456 228 469 2.80e-21 96.7
MS.gene065243.t1 MTR_5g019580 31.325 249 143 8 232 456 257 501 3.19e-21 96.7
MS.gene065243.t1 MTR_6g033675 31.527 203 131 5 236 434 242 440 3.23e-21 96.3
MS.gene065243.t1 MTR_8g083280 30.631 222 137 7 241 456 249 459 3.75e-21 96.3
MS.gene065243.t1 MTR_3g009490 35.329 167 92 4 283 436 3 166 6.25e-21 90.5
MS.gene065243.t1 MTR_7g070810 24.609 447 290 14 7 421 8 439 7.43e-21 95.5
MS.gene065243.t1 MTR_7g070940 22.444 450 316 13 7 433 8 447 7.64e-21 95.5
MS.gene065243.t1 MTR_6g033660 34.270 178 111 4 259 434 266 439 8.28e-21 95.1
MS.gene065243.t1 MTR_2g035020 24.416 471 303 17 1 436 4 456 9.10e-21 95.1
MS.gene065243.t1 MTR_7g102490 25.214 468 289 18 7 428 8 460 1.23e-20 94.7
MS.gene065243.t1 MTR_5g090700 31.250 224 131 7 236 438 239 460 1.37e-20 94.4
MS.gene065243.t1 MTR_5g045960 25.800 469 286 18 7 432 8 457 1.43e-20 94.7
MS.gene065243.t1 MTR_5g090660 29.646 226 136 6 234 438 233 456 1.45e-20 94.7
MS.gene065243.t1 MTR_4g128720 25.383 457 281 17 7 438 14 435 1.63e-20 94.0
MS.gene065243.t1 MTR_4g117950 24.494 445 287 14 6 422 4 427 1.65e-20 94.4
MS.gene065243.t1 MTR_7g070800 22.199 473 299 14 5 433 3 450 1.78e-20 94.4
MS.gene065243.t1 MTR_0536s0010 25.280 447 280 17 6 422 19 441 1.99e-20 94.0
MS.gene065243.t1 MTR_5g090620 28.870 239 139 6 229 438 223 459 2.44e-20 93.6
MS.gene065243.t1 MTR_8g083290 32.632 190 116 6 246 434 261 439 2.65e-20 93.6
MS.gene065243.t1 MTR_5g027210 26.199 271 163 6 212 450 212 477 3.95e-20 93.2
MS.gene065243.t1 MTR_0536s0020 24.183 459 278 15 7 424 17 446 4.15e-20 93.2
MS.gene065243.t1 MTR_4g094920 30.769 208 135 6 253 454 275 479 8.23e-20 92.4
MS.gene065243.t1 MTR_6g035185 22.505 471 302 15 1 429 4 453 8.38e-20 92.0
MS.gene065243.t1 MTR_6g035265 22.747 466 302 15 6 434 9 453 8.51e-20 92.0
MS.gene065243.t1 MTR_7g102520 26.437 435 282 16 7 413 11 435 1.24e-19 91.7
MS.gene065243.t1 MTR_4g082820 26.389 432 273 13 7 406 6 424 1.59e-19 91.3
MS.gene065243.t1 MTR_5g090630 31.050 219 128 8 241 438 233 449 2.16e-19 90.9
MS.gene065243.t1 MTR_2g059240 24.533 428 268 14 2 397 8 412 2.17e-19 90.9
MS.gene065243.t1 MTR_4g095008 30.288 208 136 6 253 454 260 464 2.52e-19 90.9
MS.gene065243.t1 MTR_7g071050 23.729 472 284 17 7 455 12 430 2.69e-19 90.1
MS.gene065243.t1 MTR_8g064870 24.569 464 294 18 5 434 8 449 2.96e-19 90.5
MS.gene065243.t1 MTR_4g485640 29.487 234 136 8 220 427 409 639 3.22e-19 90.9
MS.gene065243.t1 MTR_8g012745 30.841 214 128 7 237 435 237 445 3.36e-19 90.1
MS.gene065243.t1 MTR_8g088560 29.536 237 141 9 236 454 229 457 3.64e-19 90.1
MS.gene065243.t1 MTR_7g102450 24.781 456 283 18 8 428 11 441 3.90e-19 90.1
MS.gene065243.t1 MTR_8g008970 28.030 264 159 6 184 434 195 440 4.03e-19 90.9
MS.gene065243.t1 MTR_8g008970 28.788 264 152 9 178 436 531 763 4.36e-17 84.3
MS.gene065243.t1 MTR_8g064880 25.442 452 267 17 5 412 6 431 4.07e-19 90.1
MS.gene065243.t1 MTR_1g107360 30.088 226 136 6 220 434 223 437 4.12e-19 90.1
MS.gene065243.t1 MTR_6g038300 30.435 184 118 5 257 440 264 437 4.92e-19 89.7
MS.gene065243.t1 MTR_7g070780 21.814 463 316 13 5 433 8 458 4.92e-19 89.7
MS.gene065243.t1 MTR_3g079480 23.861 461 288 21 8 428 21 458 5.38e-19 89.7
MS.gene065243.t1 MTR_7g070930 22.316 475 314 14 1 433 1 462 5.83e-19 89.7
MS.gene065243.t1 MTR_4g117890 25.161 465 280 20 7 432 12 447 6.31e-19 89.4
MS.gene065243.t1 MTR_5g090580 27.692 260 156 8 206 438 204 458 8.22e-19 89.0
MS.gene065243.t1 MTR_3g084520 27.397 219 130 7 241 436 238 450 9.68e-19 89.0
MS.gene065243.t1 MTR_3g084540 28.272 191 125 4 253 436 266 451 1.10e-18 88.6
MS.gene065243.t1 MTR_4g128690 33.708 178 105 5 257 434 264 428 1.20e-18 88.6
MS.gene065243.t1 MTR_5g098960 33.014 209 114 10 229 426 225 418 1.44e-18 88.2
MS.gene065243.t1 MTR_5g067170 31.522 184 111 4 253 422 262 444 1.44e-18 88.6
MS.gene065243.t1 MTR_5g070040 32.759 232 135 11 221 439 228 451 2.16e-18 87.8
MS.gene065243.t1 MTR_3g069710 33.889 180 107 7 257 434 258 427 2.36e-18 87.8
MS.gene065243.t1 MTR_3g084530 29.319 191 122 5 253 436 266 450 2.59e-18 87.4
MS.gene065243.t1 MTR_8g044140 23.000 400 232 12 64 416 37 407 3.13e-18 87.4
MS.gene065243.t1 MTR_5g090670 28.500 200 123 4 257 438 263 460 3.91e-18 87.0
MS.gene065243.t1 MTR_1g029540 22.566 452 297 17 13 440 19 441 5.42e-18 86.7
MS.gene065243.t1 MTR_2g035040 30.412 194 116 5 257 436 173 361 5.47e-18 85.9
MS.gene065243.t1 MTR_0288s0020 25.105 478 257 19 8 429 10 442 7.73e-18 85.9
MS.gene065243.t1 MTR_1g032490 25.688 436 286 18 2 412 4 426 1.00e-17 85.9
MS.gene065243.t1 MTR_7g080950 30.688 189 118 7 253 441 253 428 1.09e-17 85.5
MS.gene065243.t1 MTR_7g080940 30.055 183 117 5 254 436 259 430 1.24e-17 85.5
MS.gene065243.t1 MTR_3g031450 26.383 235 141 7 220 439 213 430 1.55e-17 85.1
MS.gene065243.t1 MTR_3g479520 23.576 509 312 22 1 458 1 483 1.78e-17 85.1
MS.gene065243.t1 MTR_4g117960 23.305 472 293 19 1 429 6 451 2.61e-17 84.7
MS.gene065243.t1 MTR_6g013900 32.022 178 107 6 253 428 283 448 2.84e-17 84.3
MS.gene065243.t1 MTR_7g080935 29.508 183 118 5 254 436 259 430 3.87e-17 84.0
MS.gene065243.t1 MTR_5g029800 31.844 179 107 4 253 417 260 437 3.88e-17 84.0
MS.gene065243.t1 MTR_1g107375 29.130 230 133 8 220 434 215 429 4.06e-17 84.0
MS.gene065243.t1 MTR_4g108250 21.581 468 314 12 7 436 10 462 4.09e-17 84.0
MS.gene065243.t1 MTR_1g107365 28.700 223 131 8 227 434 258 467 4.91e-17 84.0
MS.gene065243.t1 MTR_7g011470 28.400 250 145 9 201 434 206 437 5.24e-17 83.6
MS.gene065243.t1 MTR_3g479610 29.070 172 113 4 257 428 120 282 5.36e-17 82.0
MS.gene065243.t1 MTR_7g011470 28.400 250 145 9 201 434 210 441 5.93e-17 83.6
MS.gene065243.t1 MTR_8g090095 27.660 235 152 7 221 440 230 461 6.63e-17 83.2
MS.gene065243.t1 MTR_0891s0010 28.655 171 113 4 257 427 97 258 9.47e-17 80.9
MS.gene065243.t1 MTR_5g016480 28.649 185 126 5 251 434 267 446 1.01e-16 82.8
MS.gene065243.t1 MTR_8g032950 23.261 460 299 18 6 429 10 451 1.03e-16 82.8
MS.gene065243.t1 MTR_4g082810 34.118 170 103 3 236 397 240 408 1.11e-16 82.0
MS.gene065243.t1 MTR_7g012120 29.891 184 114 4 253 422 266 448 1.14e-16 82.8
MS.gene065243.t1 MTR_5g090600 25.725 276 174 9 199 458 193 453 1.30e-16 82.4
MS.gene065243.t1 MTR_6g014170 30.435 184 114 6 253 434 266 437 1.79e-16 82.0
MS.gene065243.t1 MTR_4g008630 26.250 240 162 6 210 437 205 441 1.80e-16 82.0
MS.gene065243.t1 MTR_5g040030 26.230 244 149 7 215 434 224 460 2.32e-16 81.6
MS.gene065243.t1 MTR_7g470610 32.500 160 103 4 253 409 128 285 3.57e-16 79.3
MS.gene065243.t1 MTR_7g070583 32.500 160 103 4 253 409 128 285 3.57e-16 79.3
MS.gene065243.t1 MTR_6g013920 29.609 179 110 6 253 428 283 448 7.41e-16 80.1
MS.gene065243.t1 MTR_6g013990 25.506 247 156 9 201 434 222 453 1.18e-15 79.3
MS.gene065243.t1 MTR_6g014220 29.444 180 113 6 257 434 286 453 1.29e-15 79.3
MS.gene065243.t1 MTR_7g070860 20.682 469 293 13 7 433 6 437 1.46e-15 79.0
MS.gene065243.t1 MTR_6g014020 30.556 180 111 6 253 428 284 453 1.84e-15 79.0
MS.gene065243.t1 MTR_3g008010 29.834 181 111 7 257 434 286 453 2.17e-15 78.6
MS.gene065243.t1 MTR_5g004940 33.582 134 87 2 242 374 182 314 2.25e-15 78.2
MS.gene065243.t1 MTR_2g008210 30.682 176 113 6 253 427 278 445 2.52e-15 78.6
MS.gene065243.t1 MTR_6g014200 29.348 184 116 6 253 434 281 452 2.91e-15 78.2
MS.gene065243.t1 MTR_1g107285 29.756 205 120 6 220 410 223 417 3.23e-15 78.2
MS.gene065243.t1 MTR_5g070090 26.502 283 171 11 166 435 184 442 3.39e-15 77.8
MS.gene065243.t1 MTR_5g072820 24.583 240 157 6 210 439 202 427 3.68e-15 77.8
MS.gene065243.t1 MTR_8g059425 26.693 251 153 12 199 429 220 459 3.87e-15 77.8
MS.gene065243.t1 MTR_3g479490 26.136 176 121 4 259 434 283 449 3.92e-15 77.8
MS.gene065243.t1 MTR_8g056740 25.225 222 152 5 220 431 121 338 4.07e-15 77.4
MS.gene065243.t1 MTR_5g072840 22.737 453 294 16 8 439 10 427 4.44e-15 77.4
MS.gene065243.t1 MTR_6g014250 28.889 180 114 6 257 434 286 453 4.60e-15 77.8
MS.gene065243.t1 MTR_6g011340 26.908 249 151 10 201 429 224 461 4.63e-15 77.8
MS.gene065243.t1 MTR_7g070870 29.878 164 104 4 218 371 225 387 6.87e-15 77.0
MS.gene065243.t1 MTR_5g072830 23.629 237 159 5 208 434 200 424 1.36e-14 75.9
MS.gene065243.t1 MTR_6g014310 26.104 249 152 10 201 434 225 456 1.87e-14 75.9
MS.gene065243.t1 MTR_8g007585 28.889 180 114 6 257 434 200 367 1.91e-14 75.1
MS.gene065243.t1 MTR_6g014190 28.804 184 117 6 253 434 91 262 2.16e-14 73.9
MS.gene065243.t1 MTR_5g039900 22.174 460 311 14 7 434 12 456 2.27e-14 75.5
MS.gene065243.t1 MTR_5g058320 29.213 178 112 6 253 428 269 434 3.58e-14 74.7
MS.gene065243.t1 MTR_6g013450 27.869 183 121 5 253 429 285 462 3.62e-14 74.7
MS.gene065243.t1 MTR_4g118000 23.326 463 297 17 6 435 10 447 4.27e-14 74.7
MS.gene065243.t1 MTR_6g014050 28.571 182 116 6 255 434 287 456 4.44e-14 74.7
MS.gene065243.t1 MTR_6g014270 28.261 184 118 6 253 434 283 454 6.34e-14 73.9
MS.gene065243.t1 MTR_6g014240 27.717 184 119 6 253 434 251 422 8.10e-14 73.6
MS.gene065243.t1 MTR_6g014040 30.000 180 112 6 253 428 285 454 1.96e-13 72.4
MS.gene065243.t1 MTR_6g014187 23.617 470 292 21 8 434 10 455 2.78e-13 72.0
MS.gene065243.t1 MTR_4g064987 23.956 455 281 21 18 446 18 433 3.27e-13 71.6
MS.gene065243.t1 MTR_6g014150 28.261 184 118 6 253 434 281 452 4.09e-13 71.6
MS.gene065243.t1 MTR_7g039550 26.190 252 151 9 220 447 5 245 9.87e-13 68.9
MS.gene065243.t1 MTR_1g040310 21.696 401 233 14 64 416 75 442 1.43e-12 70.1
MS.gene065243.t1 MTR_4g064987 23.644 461 281 21 18 446 18 439 1.69e-12 69.7
MS.gene065243.t1 MTR_7g080900 29.480 173 112 5 257 429 264 426 1.77e-12 69.3
MS.gene065243.t1 MTR_8g009840 26.606 218 138 4 261 458 314 529 1.96e-12 69.7
MS.gene065243.t1 MTR_6g014290 26.667 180 118 6 257 434 286 453 3.00e-12 68.9
MS.gene065243.t1 MTR_6g013960 25.543 184 123 6 253 434 284 455 6.41e-12 67.8
MS.gene065243.t1 MTR_0036s0220 28.000 175 115 6 253 427 282 445 1.10e-11 67.0
MS.gene065243.t1 MTR_6g078320 25.641 195 135 2 236 420 252 446 2.60e-11 65.9
MS.gene065243.t1 MTR_5g031860 29.286 140 93 4 257 395 280 414 3.46e-11 65.5
MS.gene065243.t1 MTR_0536s0030 31.343 134 79 4 309 432 194 324 5.57e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene065243.t1 AT5G53990 45.952 457 222 7 7 458 5 441 4.41e-144 419
MS.gene065243.t1 AT4G27570 44.835 455 233 7 8 458 7 447 3.90e-143 417
MS.gene065243.t1 AT5G54010 44.835 455 240 5 5 458 3 447 5.24e-143 417
MS.gene065243.t1 AT5G54060 45.435 460 242 6 5 458 10 466 3.28e-141 413
MS.gene065243.t1 AT4G27560 44.615 455 234 7 8 458 7 447 9.39e-141 411
MS.gene065243.t1 AT1G64920 44.858 457 231 7 7 458 5 445 2.41e-140 410
MS.gene065243.t1 AT2G22930 45.254 453 231 5 7 458 5 441 8.98e-139 405
MS.gene065243.t1 AT4G09500 44.812 453 233 6 7 458 5 441 2.35e-137 402
MS.gene065243.t1 AT1G64910 43.545 457 233 6 7 458 5 441 8.41e-135 396
MS.gene065243.t1 AT3G29630 43.640 456 233 6 5 454 3 440 5.95e-134 394
MS.gene065243.t1 AT3G29630 42.605 453 216 7 5 454 3 414 8.87e-126 372
MS.gene065243.t1 AT4G09500 42.478 452 220 6 7 458 5 416 1.44e-124 369
MS.gene065243.t1 AT1G50580 41.501 453 245 5 5 454 3 438 2.26e-123 367
MS.gene065243.t1 AT2G22590 33.978 465 278 16 7 454 14 466 1.66e-69 228
MS.gene065243.t1 AT5G49690 30.921 456 290 12 7 452 9 449 1.08e-64 216
MS.gene065243.t1 AT5G65550 30.085 472 299 17 1 454 1 459 1.29e-58 200
MS.gene065243.t1 AT2G22930 38.710 217 119 2 7 223 5 207 2.74e-49 170
MS.gene065243.t1 AT2G22930 36.190 105 62 3 357 458 187 289 1.57e-12 68.6
MS.gene065243.t1 AT5G12890 28.846 468 284 19 4 437 6 458 9.79e-36 138
MS.gene065243.t1 AT5G03490 25.951 447 289 12 6 435 17 438 1.11e-34 135
MS.gene065243.t1 AT4G36770 27.778 468 269 20 7 435 3 440 1.37e-33 132
MS.gene065243.t1 AT2G36770 28.261 460 284 19 6 428 12 462 6.16e-31 125
MS.gene065243.t1 AT2G36780 28.478 460 281 18 7 428 13 462 1.14e-30 124
MS.gene065243.t1 AT1G73880 25.532 423 272 14 2 399 8 412 3.17e-30 122
MS.gene065243.t1 AT2G36750 28.942 463 274 19 6 429 8 454 1.00e-29 121
MS.gene065243.t1 AT2G36800 27.646 463 286 18 5 428 9 461 2.36e-29 120
MS.gene065243.t1 AT1G51210 26.364 440 283 14 8 433 20 432 5.22e-29 118
MS.gene065243.t1 AT1G05675 27.778 450 275 17 8 434 6 428 1.25e-28 117
MS.gene065243.t1 AT3G50740 25.486 463 290 15 8 435 7 449 6.20e-28 116
MS.gene065243.t1 AT2G15490 25.166 453 300 14 7 427 6 451 1.97e-27 114
MS.gene065243.t1 AT2G15490 25.111 450 301 13 7 427 6 448 2.05e-27 114
MS.gene065243.t1 AT2G16890 26.464 461 303 18 8 445 9 456 2.12e-27 114
MS.gene065243.t1 AT2G18570 26.096 456 301 17 1 434 1 442 1.08e-26 112
MS.gene065243.t1 AT2G15480 25.216 464 301 14 7 436 9 460 1.50e-26 112
MS.gene065243.t1 AT2G31750 24.837 459 295 15 1 436 1 432 3.69e-26 110
MS.gene065243.t1 AT2G31750 24.837 459 295 15 1 436 1 432 5.20e-26 110
MS.gene065243.t1 AT2G15480 25.503 447 287 14 7 419 9 443 6.00e-26 110
MS.gene065243.t1 AT4G34135 25.109 458 279 15 7 428 10 439 6.12e-26 110
MS.gene065243.t1 AT4G34131 25.738 474 287 18 2 434 4 453 6.26e-26 110
MS.gene065243.t1 AT1G01420 26.371 474 263 18 8 434 11 445 1.51e-25 109
MS.gene065243.t1 AT1G01420 26.371 474 263 18 8 434 8 442 1.58e-25 109
MS.gene065243.t1 AT2G36760 27.468 466 280 18 6 428 12 462 2.34e-25 108
MS.gene065243.t1 AT1G10400 25.263 475 310 18 7 452 6 464 6.65e-25 107
MS.gene065243.t1 AT4G34138 25.100 498 302 17 5 458 8 478 7.35e-25 107
MS.gene065243.t1 AT1G05680 26.000 450 283 17 8 434 6 428 3.24e-24 105
MS.gene065243.t1 AT3G53150 26.638 473 295 20 7 436 21 484 3.26e-24 105
MS.gene065243.t1 AT2G31790 25.328 458 278 18 8 434 8 432 4.39e-24 104
MS.gene065243.t1 AT2G16890 25.882 425 284 16 8 412 9 422 7.54e-24 103
MS.gene065243.t1 AT2G18560 30.556 216 131 4 232 434 143 352 1.19e-23 102
MS.gene065243.t1 AT4G01070 25.793 473 268 20 8 434 8 443 1.35e-23 103
MS.gene065243.t1 AT5G66690 24.670 454 298 17 8 435 7 442 1.99e-23 103
MS.gene065243.t1 AT5G14860 24.486 486 324 18 1 454 1 475 8.66e-23 101
MS.gene065243.t1 AT2G30140 24.786 468 301 18 8 454 13 450 1.02e-22 100
MS.gene065243.t1 AT3G53160 23.696 460 312 15 1 428 1 453 1.67e-22 100
MS.gene065243.t1 AT2G36970 29.825 228 148 6 215 437 229 449 3.21e-22 99.8
MS.gene065243.t1 AT2G30140 24.788 472 297 19 8 454 13 451 4.52e-22 99.0
MS.gene065243.t1 AT1G07250 29.004 231 152 6 236 456 246 474 5.93e-22 98.6
MS.gene065243.t1 AT2G29730 25.658 456 291 19 7 433 4 440 6.11e-22 98.6
MS.gene065243.t1 AT2G43820 32.124 193 121 4 257 449 255 437 7.36e-22 98.2
MS.gene065243.t1 AT2G30150 23.810 483 308 20 4 458 6 456 7.44e-22 98.2
MS.gene065243.t1 AT4G15280 31.064 235 141 5 241 456 275 507 9.33e-22 98.2
MS.gene065243.t1 AT4G15280 31.064 235 141 5 241 456 243 475 9.81e-22 98.2
MS.gene065243.t1 AT5G26310 23.789 454 302 16 8 435 7 442 1.12e-21 97.8
MS.gene065243.t1 AT2G43840 32.105 190 119 4 259 448 257 436 1.44e-21 97.4
MS.gene065243.t1 AT2G43840 32.105 190 119 4 259 448 257 436 1.44e-21 97.4
MS.gene065243.t1 AT3G46680 25.597 461 282 17 8 445 9 431 5.77e-21 95.5
MS.gene065243.t1 AT4G15260 30.085 236 143 6 241 456 123 356 5.81e-21 94.4
MS.gene065243.t1 AT3G46670 25.624 441 289 19 2 427 3 419 6.24e-21 95.5
MS.gene065243.t1 AT4G15550 22.678 463 312 14 2 436 7 451 7.55e-21 95.5
MS.gene065243.t1 AT3G21760 32.292 192 112 5 257 432 269 458 8.69e-21 95.1
MS.gene065243.t1 AT2G36790 26.866 469 287 20 2 428 7 461 2.15e-20 94.0
MS.gene065243.t1 AT3G21800 30.698 215 130 4 257 454 263 475 2.43e-20 94.0
MS.gene065243.t1 AT4G15480 32.609 184 117 6 254 434 275 454 4.18e-20 93.2
MS.gene065243.t1 AT2G30150 23.567 471 303 19 13 458 2 440 4.47e-20 92.8
MS.gene065243.t1 AT3G21560 24.242 462 298 16 4 434 8 448 4.57e-20 93.2
MS.gene065243.t1 AT3G21750 28.216 241 151 5 236 456 232 470 5.21e-20 92.8
MS.gene065243.t1 AT1G01390 34.343 198 109 6 248 428 248 441 5.39e-20 92.8
MS.gene065243.t1 AT1G01390 34.343 198 109 6 248 428 265 458 5.41e-20 92.8
MS.gene065243.t1 AT1G07240 29.787 329 188 13 134 435 144 456 7.91e-20 92.4
MS.gene065243.t1 AT3G21790 29.876 241 145 6 236 454 240 478 9.78e-20 92.0
MS.gene065243.t1 AT5G59590 28.736 261 165 10 205 458 200 446 2.00e-19 90.9
MS.gene065243.t1 AT3G11340 24.439 446 282 17 9 434 10 420 2.38e-19 90.5
MS.gene065243.t1 AT5G05860 24.385 447 290 16 7 435 8 424 2.88e-19 90.5
MS.gene065243.t1 AT4G15500 32.778 180 111 6 257 434 267 438 4.45e-19 90.1
MS.gene065243.t1 AT3G21780 30.093 216 133 5 257 456 257 470 4.49e-19 90.1
MS.gene065243.t1 AT5G05880 28.194 227 147 8 207 425 200 418 5.64e-19 89.4
MS.gene065243.t1 AT5G59580 28.352 261 171 9 201 454 196 447 8.22e-19 89.0
MS.gene065243.t1 AT1G24100 30.208 192 125 4 257 448 266 448 9.68e-19 89.0
MS.gene065243.t1 AT3G16520 29.767 215 138 5 236 446 242 447 1.02e-18 88.6
MS.gene065243.t1 AT1G07260 28.821 229 151 6 236 454 245 471 1.23e-18 88.6
MS.gene065243.t1 AT4G15490 22.391 460 313 13 1 434 1 442 1.30e-18 88.6
MS.gene065243.t1 AT5G05870 29.114 237 152 7 206 435 204 431 2.24e-18 87.8
MS.gene065243.t1 AT3G16520 30.392 204 129 5 236 435 242 436 3.32e-18 87.0
MS.gene065243.t1 AT3G16520 30.392 204 129 5 236 435 242 436 3.40e-18 87.0
MS.gene065243.t1 AT5G05890 27.572 243 161 8 199 434 196 430 5.38e-18 86.7
MS.gene065243.t1 AT5G38040 26.490 453 270 22 16 442 18 433 1.22e-17 85.5
MS.gene065243.t1 AT3G46660 32.227 211 127 8 236 440 237 437 1.86e-17 85.1
MS.gene065243.t1 AT2G29740 30.348 201 130 6 236 428 250 448 2.95e-17 84.3
MS.gene065243.t1 AT3G22250 32.222 180 96 8 257 428 274 435 4.13e-17 84.0
MS.gene065243.t1 AT2G29710 31.694 183 112 5 257 433 265 440 4.16e-17 84.0
MS.gene065243.t1 AT1G06000 22.816 412 246 12 8 394 10 374 4.90e-17 83.6
MS.gene065243.t1 AT3G55700 30.732 205 127 7 246 445 246 440 5.75e-17 83.6
MS.gene065243.t1 AT1G05560 28.700 223 138 7 241 448 275 491 8.54e-17 83.2
MS.gene065243.t1 AT1G05560 28.700 223 138 7 241 448 225 441 1.08e-16 82.8
MS.gene065243.t1 AT3G55710 35.000 140 86 4 259 396 263 399 1.62e-16 82.0
MS.gene065243.t1 AT1G05530 25.483 259 165 7 219 455 203 455 2.69e-16 81.3
MS.gene065243.t1 AT5G05900 24.145 468 295 21 1 436 1 440 3.71e-16 80.9
MS.gene065243.t1 AT2G29750 30.435 184 122 5 249 428 267 448 7.59e-16 80.1
MS.gene065243.t1 AT4G14090 29.146 199 130 7 253 448 255 445 9.52e-16 79.7
MS.gene065243.t1 AT2G23260 28.492 179 120 5 257 435 260 430 1.13e-15 79.3
MS.gene065243.t1 AT2G23250 29.609 179 118 5 257 435 242 412 1.17e-15 79.3
MS.gene065243.t1 AT1G78270 28.261 184 123 5 253 436 283 457 2.93e-15 78.2
MS.gene065243.t1 AT1G22400 29.891 184 119 5 253 436 285 458 6.09e-15 77.4
MS.gene065243.t1 AT1G22360 29.348 184 120 5 253 436 281 454 8.67e-15 76.6
MS.gene065243.t1 AT3G02100 22.912 467 288 18 8 440 13 441 1.43e-14 76.3
MS.gene065243.t1 AT5G38010 24.729 461 288 19 8 442 10 437 2.75e-14 75.1
MS.gene065243.t1 AT3G46720 23.702 443 275 17 8 427 9 411 3.25e-14 74.7
MS.gene065243.t1 AT2G28080 26.415 212 144 6 213 416 227 434 3.35e-14 75.1
MS.gene065243.t1 AT5G17050 27.933 179 114 6 257 434 268 432 3.52e-14 74.7
MS.gene065243.t1 AT5G17030 26.087 230 150 8 210 433 215 430 1.67e-13 72.8
MS.gene065243.t1 AT2G26480 25.806 248 158 9 208 445 196 427 3.38e-13 71.6
MS.gene065243.t1 AT1G22340 27.222 180 122 4 257 436 288 458 3.55e-13 71.6
MS.gene065243.t1 AT1G22380 28.804 184 121 5 253 436 284 457 4.07e-13 71.6
MS.gene065243.t1 AT1G22360 28.261 184 110 6 253 436 281 442 4.88e-12 68.2
MS.gene065243.t1 AT5G17040 26.111 180 120 5 257 436 251 417 8.23e-12 67.4
MS.gene065243.t1 AT5G17040 26.111 180 120 5 257 436 149 315 1.20e-11 66.2

Find 93 sgRNAs with CRISPR-Local

Find 109 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAAAACCTGTTCTGCTTTC+AGG 0.078488 2.1:-17745953 MS.gene065243:CDS
AGTGATGAGTTCAAAATTTA+TGG 0.097757 2.1:-17745507 MS.gene065243:CDS
TCCTCTAGTGTTGTATTTGT+TGG 0.233370 2.1:+17745914 None:intergenic
ATCACAGTTCCTCATGTTAA+TGG 0.256113 2.1:-17746463 MS.gene065243:CDS
AACTTCTTCTCAAGGAAATA+AGG 0.277035 2.1:-17746348 MS.gene065243:CDS
ATCCTTTCATTGAACCCTTC+TGG 0.282930 2.1:+17745707 None:intergenic
TCAACTTTGGAAGCCAATAT+TGG 0.284433 2.1:+17746302 None:intergenic
TTGCTTGGTCTTGAGTTAAC+AGG 0.300933 2.1:-17745791 MS.gene065243:CDS
AAAATGGATTTCATGGCTTA+AGG 0.310467 2.1:-17745891 MS.gene065243:CDS
CCAAGATAAGCTGTGGATAC+TGG 0.319952 2.1:+17746235 None:intergenic
AAAGGTTGCAATGAAATTGA+TGG 0.328357 2.1:-17746007 MS.gene065243:CDS
GGGTTCAATGAAAGGATAAA+AGG 0.342906 2.1:-17745701 MS.gene065243:CDS
GGGACAAAGGTAATAAGATT+TGG 0.347167 2.1:+17746487 None:intergenic
TAAAACTTGATGCAAGAATC+AGG 0.354611 2.1:+17746142 None:intergenic
GTTCAATATCCTTCTCTGTT+TGG 0.364016 2.1:+17746368 None:intergenic
TTGTTGGAGAGGTGAAGATA+TGG 0.378348 2.1:+17746589 None:intergenic
GCAGCACTTAAGCCACCTAT+TGG 0.380205 2.1:-17745755 MS.gene065243:CDS
TTAACATGAGGAACTGTGAT+AGG 0.385255 2.1:+17746466 None:intergenic
TCAATTGTTTCAAATCCAAT+AGG 0.386383 2.1:+17745740 None:intergenic
GGCTTAAGTGCTGCAAGAAA+TGG 0.387827 2.1:+17745764 None:intergenic
AAATGGATTTCATGGCTTAA+GGG 0.393977 2.1:-17745890 MS.gene065243:CDS
ACCTCTTAATGCTAACTTGT+TGG 0.399917 2.1:+17746573 None:intergenic
CCAGTATCCACAGCTTATCT+TGG 0.402654 2.1:-17746235 MS.gene065243:CDS
ATCCTTCTCTGTTTGGTCCA+TGG 0.404687 2.1:+17746375 None:intergenic
AGTGTTGTATTTGTTGGCTC+AGG 0.421458 2.1:+17745920 None:intergenic
AAGGGATTGTGTATGGAAGT+TGG 0.421780 2.1:-17745676 MS.gene065243:CDS
ATGAGGTTGGAAAAGAAGTA+AGG 0.423482 2.1:-17745394 MS.gene065243:CDS
CCAAGGTTTATAGTCAACTT+TGG 0.426911 2.1:+17746289 None:intergenic
AATAAGAGGGACTAAAGAAA+AGG 0.434353 2.1:+17746405 None:intergenic
AATGAAAGGATAAAAGGAAA+AGG 0.439943 2.1:-17745695 MS.gene065243:CDS
ACAACCTCTGCAGATGCAAT+TGG 0.447132 2.1:-17746034 MS.gene065243:CDS
AATGTTTCCATGGTTTGCTA+TGG 0.456397 2.1:-17746623 MS.gene065243:CDS
TCCATGGCTGTAGCAATAAG+AGG 0.461979 2.1:+17746391 None:intergenic
ATGAAAGGATAAAAGGAAAA+GGG 0.462020 2.1:-17745694 MS.gene065243:CDS
CAATTTCAAGAGTTGTTGCT+TGG 0.466420 2.1:-17745806 MS.gene065243:CDS
AAAGGAAAAGGGATTGTGTA+TGG 0.468070 2.1:-17745683 MS.gene065243:CDS
CTGGTGTTGTTGCCACGTCT+TGG 0.470989 2.1:-17745554 MS.gene065243:CDS
ACAGGACCTGAAAGCAGAAC+AGG 0.471617 2.1:+17745947 None:intergenic
TACCAGAAGGGTTCAATGAA+AGG 0.477556 2.1:-17745709 MS.gene065243:CDS
CTGGAGTCAATATAATGTAT+TGG 0.483981 2.1:+17746254 None:intergenic
TCCAACAAGTTAGCATTAAG+AGG 0.486768 2.1:-17746574 MS.gene065243:CDS
AAATCAAAGAAAACTATTTG+TGG 0.487198 2.1:+17746325 None:intergenic
ATGGATGATGAGAATGAGGT+TGG 0.487478 2.1:-17745407 MS.gene065243:CDS
AAAATTTCCTTGTTGAAGCT+AGG 0.487842 2.1:+17746101 None:intergenic
TTGAAGAAGCTTTACCAGAA+GGG 0.495315 2.1:-17745721 MS.gene065243:CDS
GCAGATGCAATTGGTTTCAA+AGG 0.495490 2.1:-17746025 MS.gene065243:CDS
GTTGAGAAAGGTGATGAAGA+TGG 0.504202 2.1:-17745473 MS.gene065243:CDS
ATGTTTCCATGGTTTGCTAT+GGG 0.504571 2.1:-17746622 MS.gene065243:CDS
GGAAACATTGCTATGTGTAA+AGG 0.506531 2.1:+17746637 None:intergenic
TACACATAGCAATGTTTCCA+TGG 0.507754 2.1:-17746633 MS.gene065243:CDS
TGTTGGAGAGGTGAAGATAT+GGG 0.518669 2.1:+17746590 None:intergenic
TTCAAAATTTATGGTTGGTG+TGG 0.519370 2.1:-17745498 MS.gene065243:CDS
TTATTTGATCGTTTGCACAT+AGG 0.524916 2.1:-17746058 MS.gene065243:CDS
GGATATTGAACTTCTTCTCA+AGG 0.527735 2.1:-17746356 MS.gene065243:CDS
CCCTCTTATTGCTACAGCCA+TGG 0.534700 2.1:-17746392 MS.gene065243:CDS
ATAAGAGGGACTAAAGAAAA+GGG 0.535599 2.1:+17746406 None:intergenic
GATCTCATGAAACCGCCTGC+AGG 0.541019 2.1:-17746169 MS.gene065243:CDS
ATTGTTTCAAATCCAATAGG+TGG 0.549952 2.1:+17745743 None:intergenic
TAAAGGAGAAGGAGCATCCA+TGG 0.554316 2.1:+17746654 None:intergenic
CAAGAATCAGGAAAACCTGC+AGG 0.555559 2.1:+17746154 None:intergenic
ATTGAAGAAGCTTTACCAGA+AGG 0.555764 2.1:-17745722 MS.gene065243:CDS
CCAAAGTTGACTATAAACCT+TGG 0.559267 2.1:-17746289 MS.gene065243:CDS
TGGAGCTGCTTCTATAACTG+AGG 0.562901 2.1:-17745597 MS.gene065243:CDS
TGAGGTTGGAAAAGAAGTAA+GGG 0.563327 2.1:-17745393 MS.gene065243:CDS
ACTTGTTAACACGTGTCAGC+TGG 0.567449 2.1:-17745573 MS.gene065243:CDS
ATGAGTTCAAAATTTATGGT+TGG 0.568022 2.1:-17745503 MS.gene065243:CDS
ATTGCTATGTGTAAAGGAGA+AGG 0.577456 2.1:+17746643 None:intergenic
TAACATGAGGAACTGTGATA+GGG 0.579312 2.1:+17746467 None:intergenic
ATGTTTCTGCATCATGTGGA+AGG 0.581236 2.1:+17746440 None:intergenic
GAAACCAATTGCATCTGCAG+AGG 0.585035 2.1:+17746030 None:intergenic
TCTTGCATTCATGATATGAT+CGG 0.585265 2.1:+17745529 None:intergenic
TGTGATGGATGATGAGAATG+AGG 0.586203 2.1:-17745411 MS.gene065243:CDS
GTTATGAAACATCCAACAGA+AGG 0.588945 2.1:+17745626 None:intergenic
TTAATGCTAACTTGTTGGAG+AGG 0.601672 2.1:+17746578 None:intergenic
GTTTCAATATAATCAGCATA+CGG 0.609203 2.1:+17745983 None:intergenic
TAAACATCCAAGATAAGCTG+TGG 0.613726 2.1:+17746228 None:intergenic
GAAGATGTTTCTGCATCATG+TGG 0.620712 2.1:+17746436 None:intergenic
AGGAACTGTGATAGGGACAA+AGG 0.624768 2.1:+17746474 None:intergenic
TTCGATTCCTAGCTTCAACA+AGG 0.628026 2.1:-17746108 MS.gene065243:CDS
CCATGGCTGTAGCAATAAGA+GGG 0.636758 2.1:+17746392 None:intergenic
GTTGGTGTGGAAGTTGAGAA+AGG 0.637430 2.1:-17745485 MS.gene065243:CDS
AAGTGTCCCATAGCAAACCA+TGG 0.639716 2.1:+17746616 None:intergenic
GCCAACAAATACAACACTAG+AGG 0.646740 2.1:-17745915 MS.gene065243:CDS
GGAGCTGCTTCTATAACTGA+GGG 0.647559 2.1:-17745596 MS.gene065243:CDS
AGCCATGGACCAAACAGAGA+AGG 0.647882 2.1:-17746377 MS.gene065243:CDS
TTTGTTGGCTCAGGTAACAC+AGG 0.651671 2.1:+17745929 None:intergenic
CAAAGCTGTGAAGATTGTGA+TGG 0.655994 2.1:-17745426 MS.gene065243:CDS
GTTGGAGAGGTGAAGATATG+GGG 0.667052 2.1:+17746591 None:intergenic
TGTGGAAGGCCATTAACATG+AGG 0.687192 2.1:+17746454 None:intergenic
ATATGATCGGAACCAAGACG+TGG 0.688479 2.1:+17745542 None:intergenic
GAATCAGGAAAACCTGCAGG+CGG 0.688768 2.1:+17746157 None:intergenic
TTATGAAACATCCAACAGAA+GGG 0.698749 2.1:+17745627 None:intergenic
GGATGTTTCATAACACACTG+TGG 0.766209 2.1:-17745617 MS.gene065243:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATCAAAGAAAACTATTTG+TGG + chr2.1:17745628-17745647 None:intergenic 20.0%
!!! CAATAAAAAGTTTCTCATTT+TGG + chr2.1:17746592-17746611 None:intergenic 20.0%
!!! GATTATATTGAAACAGTTTT+TGG - chr2.1:17745976-17745995 MS.gene065243:CDS 20.0%
!!! TCAACAAGGAAATTTTTATT+TGG - chr2.1:17745856-17745875 MS.gene065243:CDS 20.0%
!!! TGAAATTGATTTTGTTCTAA+TGG + chr2.1:17746132-17746151 None:intergenic 20.0%
!!! TTTTCTTTGATTTCCAATAT+TGG - chr2.1:17745635-17745654 MS.gene065243:CDS 20.0%
! AATGAAAGGATAAAAGGAAA+AGG - chr2.1:17746255-17746274 MS.gene065243:CDS 25.0%
! AGTGATGAGTTCAAAATTTA+TGG - chr2.1:17746443-17746462 MS.gene065243:CDS 25.0%
! ATGAAAGGATAAAAGGAAAA+GGG - chr2.1:17746256-17746275 MS.gene065243:CDS 25.0%
! ATGAGTTCAAAATTTATGGT+TGG - chr2.1:17746447-17746466 MS.gene065243:CDS 25.0%
! GTTTACAAAAACTAAGTCTA+GGG - chr2.1:17745740-17745759 MS.gene065243:CDS 25.0%
! GTTTCAATATAATCAGCATA+CGG + chr2.1:17745970-17745989 None:intergenic 25.0%
! TCAATTGTTTCAAATCCAAT+AGG + chr2.1:17746213-17746232 None:intergenic 25.0%
! TGTTTACAAAAACTAAGTCT+AGG - chr2.1:17745739-17745758 MS.gene065243:CDS 25.0%
!!! AACTTGTTGAGTGTATTTTT+AGG + chr2.1:17745424-17745443 None:intergenic 25.0%
!!! AGGAAATTTTTATTTGGAAG+TGG - chr2.1:17745862-17745881 MS.gene065243:CDS 25.0%
AAAATTTCCTTGTTGAAGCT+AGG + chr2.1:17745852-17745871 None:intergenic 30.0%
AAAGGTTGCAATGAAATTGA+TGG - chr2.1:17745943-17745962 MS.gene065243:CDS 30.0%
AACTTCTTCTCAAGGAAATA+AGG - chr2.1:17745602-17745621 MS.gene065243:CDS 30.0%
AATAAGAGGGACTAAAGAAA+AGG + chr2.1:17745548-17745567 None:intergenic 30.0%
ATAAGAGGGACTAAAGAAAA+GGG + chr2.1:17745547-17745566 None:intergenic 30.0%
ATACAACACTAGAGGAAAAA+TGG - chr2.1:17746043-17746062 MS.gene065243:CDS 30.0%
ATTGTTTCAAATCCAATAGG+TGG + chr2.1:17746210-17746229 None:intergenic 30.0%
CTGGAGTCAATATAATGTAT+TGG + chr2.1:17745699-17745718 None:intergenic 30.0%
TAAAACTTGATGCAAGAATC+AGG + chr2.1:17745811-17745830 None:intergenic 30.0%
TCTTGCATTCATGATATGAT+CGG + chr2.1:17746424-17746443 None:intergenic 30.0%
TTATGAAACATCCAACAGAA+GGG + chr2.1:17746326-17746345 None:intergenic 30.0%
TTATTTGATCGTTTGCACAT+AGG - chr2.1:17745892-17745911 MS.gene065243:CDS 30.0%
! AAAATGGATTTCATGGCTTA+AGG - chr2.1:17746059-17746078 MS.gene065243:CDS 30.0%
! AAATGGATTTCATGGCTTAA+GGG - chr2.1:17746060-17746079 MS.gene065243:CDS 30.0%
! TAGAGGAAAAATGGATTTCA+TGG - chr2.1:17746052-17746071 MS.gene065243:CDS 30.0%
! TTCAAAATTTATGGTTGGTG+TGG - chr2.1:17746452-17746471 MS.gene065243:CDS 30.0%
AAAGGAAAAGGGATTGTGTA+TGG - chr2.1:17746267-17746286 MS.gene065243:CDS 35.0%
ATCACAGTTCCTCATGTTAA+TGG - chr2.1:17745487-17745506 MS.gene065243:CDS 35.0%
ATGAGGTTGGAAAAGAAGTA+AGG - chr2.1:17746556-17746575 MS.gene065243:CDS 35.0%
ATTGAAGAAGCTTTACCAGA+AGG - chr2.1:17746228-17746247 MS.gene065243:CDS 35.0%
ATTGCTATGTGTAAAGGAGA+AGG + chr2.1:17745310-17745329 None:intergenic 35.0%
CAATTTCAAGAGTTGTTGCT+TGG - chr2.1:17746144-17746163 MS.gene065243:CDS 35.0%
CCAAAGTTGACTATAAACCT+TGG - chr2.1:17745661-17745680 MS.gene065243:CDS 35.0%
CCAAGGTTTATAGTCAACTT+TGG + chr2.1:17745664-17745683 None:intergenic 35.0%
GGAAACATTGCTATGTGTAA+AGG + chr2.1:17745316-17745335 None:intergenic 35.0%
GGATATTGAACTTCTTCTCA+AGG - chr2.1:17745594-17745613 MS.gene065243:CDS 35.0%
GGGACAAAGGTAATAAGATT+TGG + chr2.1:17745466-17745485 None:intergenic 35.0%
GGGTTCAATGAAAGGATAAA+AGG - chr2.1:17746249-17746268 MS.gene065243:CDS 35.0%
GTTATGAAACATCCAACAGA+AGG + chr2.1:17746327-17746346 None:intergenic 35.0%
GTTCAATATCCTTCTCTGTT+TGG + chr2.1:17745585-17745604 None:intergenic 35.0%
TAAACATCCAAGATAAGCTG+TGG + chr2.1:17745725-17745744 None:intergenic 35.0%
TAACATGAGGAACTGTGATA+GGG + chr2.1:17745486-17745505 None:intergenic 35.0%
TACACATAGCAATGTTTCCA+TGG - chr2.1:17745317-17745336 MS.gene065243:CDS 35.0%
TCCAACAAGTTAGCATTAAG+AGG - chr2.1:17745376-17745395 MS.gene065243:CDS 35.0%
TCCTCTAGTGTTGTATTTGT+TGG + chr2.1:17746039-17746058 None:intergenic 35.0%
TGAGGTTGGAAAAGAAGTAA+GGG - chr2.1:17746557-17746576 MS.gene065243:CDS 35.0%
TGGCTTAAGGGATTCAAAAA+TGG - chr2.1:17746072-17746091 MS.gene065243:CDS 35.0%
TTAACATGAGGAACTGTGAT+AGG + chr2.1:17745487-17745506 None:intergenic 35.0%
TTGAAGAAGCTTTACCAGAA+GGG - chr2.1:17746229-17746248 MS.gene065243:CDS 35.0%
! ACCTCTTAATGCTAACTTGT+TGG + chr2.1:17745380-17745399 None:intergenic 35.0%
! TCAACTTTGGAAGCCAATAT+TGG + chr2.1:17745651-17745670 None:intergenic 35.0%
! TTTTGTGCATATGGAAGTGA+AGG - chr2.1:17746105-17746124 MS.gene065243:CDS 35.0%
!! AATGTTTCCATGGTTTGCTA+TGG - chr2.1:17745327-17745346 MS.gene065243:CDS 35.0%
!! ATGTTTCCATGGTTTGCTAT+GGG - chr2.1:17745328-17745347 MS.gene065243:CDS 35.0%
!! TTAATGCTAACTTGTTGGAG+AGG + chr2.1:17745375-17745394 None:intergenic 35.0%
!!! ATTTTAGAACACCCTTCTGT+TGG - chr2.1:17746312-17746331 MS.gene065243:CDS 35.0%
!!! TCTGTGGTTTTTTGTGCATA+TGG - chr2.1:17746096-17746115 MS.gene065243:CDS 35.0%
AAGGGATTGTGTATGGAAGT+TGG - chr2.1:17746274-17746293 MS.gene065243:CDS 40.0%
ATCCTTTCATTGAACCCTTC+TGG + chr2.1:17746246-17746265 None:intergenic 40.0%
ATGGATGATGAGAATGAGGT+TGG - chr2.1:17746543-17746562 MS.gene065243:CDS 40.0%
CAAAGCTGTGAAGATTGTGA+TGG - chr2.1:17746524-17746543 MS.gene065243:CDS 40.0%
GCCAACAAATACAACACTAG+AGG - chr2.1:17746035-17746054 MS.gene065243:CDS 40.0%
GGATGTTTCATAACACACTG+TGG - chr2.1:17746333-17746352 MS.gene065243:CDS 40.0%
GTTGAGAAAGGTGATGAAGA+TGG - chr2.1:17746477-17746496 MS.gene065243:CDS 40.0%
TACCAGAAGGGTTCAATGAA+AGG - chr2.1:17746241-17746260 MS.gene065243:CDS 40.0%
TGTTGGAGAGGTGAAGATAT+GGG + chr2.1:17745363-17745382 None:intergenic 40.0%
TTCGATTCCTAGCTTCAACA+AGG - chr2.1:17745842-17745861 MS.gene065243:CDS 40.0%
TTGTTGGAGAGGTGAAGATA+TGG + chr2.1:17745364-17745383 None:intergenic 40.0%
! ATGTTTCTGCATCATGTGGA+AGG + chr2.1:17745513-17745532 None:intergenic 40.0%
! ATTGGAGACTTTTGATGCCA+AGG + chr2.1:17745681-17745700 None:intergenic 40.0%
! GAAGATGTTTCTGCATCATG+TGG + chr2.1:17745517-17745536 None:intergenic 40.0%
! GCAGATGCAATTGGTTTCAA+AGG - chr2.1:17745925-17745944 MS.gene065243:CDS 40.0%
! GGGATTCAAAAATGGTTCTG+TGG - chr2.1:17746080-17746099 MS.gene065243:CDS 40.0%
!! AGTGTTGTATTTGTTGGCTC+AGG + chr2.1:17746033-17746052 None:intergenic 40.0%
!! TGTGATGGATGATGAGAATG+AGG - chr2.1:17746539-17746558 MS.gene065243:CDS 40.0%
!! TTGCTTGGTCTTGAGTTAAC+AGG - chr2.1:17746159-17746178 MS.gene065243:CDS 40.0%
AAGTGTCCCATAGCAAACCA+TGG + chr2.1:17745337-17745356 None:intergenic 45.0%
ACAACCTCTGCAGATGCAAT+TGG - chr2.1:17745916-17745935 MS.gene065243:CDS 45.0%
AGGAACTGTGATAGGGACAA+AGG + chr2.1:17745479-17745498 None:intergenic 45.0%
ATATGATCGGAACCAAGACG+TGG + chr2.1:17746411-17746430 None:intergenic 45.0%
ATCCTTCTCTGTTTGGTCCA+TGG + chr2.1:17745578-17745597 None:intergenic 45.0%
CAAGAATCAGGAAAACCTGC+AGG + chr2.1:17745799-17745818 None:intergenic 45.0%
CCAAGATAAGCTGTGGATAC+TGG + chr2.1:17745718-17745737 None:intergenic 45.0%
CCAGTATCCACAGCTTATCT+TGG - chr2.1:17745715-17745734 MS.gene065243:CDS 45.0%
CCATGGCTGTAGCAATAAGA+GGG + chr2.1:17745561-17745580 None:intergenic 45.0%
GAAACCAATTGCATCTGCAG+AGG + chr2.1:17745923-17745942 None:intergenic 45.0%
GGAAAACCTGTTCTGCTTTC+AGG - chr2.1:17745997-17746016 MS.gene065243:CDS 45.0%
GGAGCTGCTTCTATAACTGA+GGG - chr2.1:17746354-17746373 MS.gene065243:CDS 45.0%
GTTGGAGAGGTGAAGATATG+GGG + chr2.1:17745362-17745381 None:intergenic 45.0%
GTTGGTGTGGAAGTTGAGAA+AGG - chr2.1:17746465-17746484 MS.gene065243:CDS 45.0%
TCCATGGCTGTAGCAATAAG+AGG + chr2.1:17745562-17745581 None:intergenic 45.0%
TGGAGCTGCTTCTATAACTG+AGG - chr2.1:17746353-17746372 MS.gene065243:CDS 45.0%
TGTGGAAGGCCATTAACATG+AGG + chr2.1:17745499-17745518 None:intergenic 45.0%
! ACTTGTTAACACGTGTCAGC+TGG - chr2.1:17746377-17746396 MS.gene065243:CDS 45.0%
! GGCTTAAGTGCTGCAAGAAA+TGG + chr2.1:17746189-17746208 None:intergenic 45.0%
!! TTTGTTGGCTCAGGTAACAC+AGG + chr2.1:17746024-17746043 None:intergenic 45.0%
ACAGGACCTGAAAGCAGAAC+AGG + chr2.1:17746006-17746025 None:intergenic 50.0%
AGCCATGGACCAAACAGAGA+AGG - chr2.1:17745573-17745592 MS.gene065243:CDS 50.0%
CCCTCTTATTGCTACAGCCA+TGG - chr2.1:17745558-17745577 MS.gene065243:CDS 50.0%
GAATCAGGAAAACCTGCAGG+CGG + chr2.1:17745796-17745815 None:intergenic 50.0%
GCAGCACTTAAGCCACCTAT+TGG - chr2.1:17746195-17746214 MS.gene065243:CDS 50.0%
GATCTCATGAAACCGCCTGC+AGG - chr2.1:17745781-17745800 MS.gene065243:CDS 55.0%
!! CTGGTGTTGTTGCCACGTCT+TGG - chr2.1:17746396-17746415 MS.gene065243:CDS 55.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 17745298 17746674 17745298 ID=MS.gene065243
chr2.1 mRNA 17745298 17746674 17745298 ID=MS.gene065243.t1;Parent=MS.gene065243
chr2.1 exon 17745298 17746674 17745298 ID=MS.gene065243.t1.exon1;Parent=MS.gene065243.t1
chr2.1 CDS 17745298 17746674 17745298 ID=cds.MS.gene065243.t1;Parent=MS.gene065243.t1
Gene Sequence

>MS.gene065243

ATGGATGCTCCTTCTCCTTTACACATAGCAATGTTTCCATGGTTTGCTATGGGACACTTCACCCCATATCTTCACCTCTCCAACAAGTTAGCATTAAGAGGTCACAAAATATCATTCTTCATACCTAAAAATACACTCAACAAGTTACAACATCTCAATCTTCATCCAAATCTTATTACCTTTGTCCCTATCACAGTTCCTCATGTTAATGGCCTTCCACATGATGCAGAAACATCTTCTGATGTACCCTTTTCTTTAGTCCCTCTTATTGCTACAGCCATGGACCAAACAGAGAAGGATATTGAACTTCTTCTCAAGGAAATAAGGCCACAAATAGTTTTCTTTGATTTCCAATATTGGCTTCCAAAGTTGACTATAAACCTTGGCATCAAAAGTCTCCAATACATTATATTGACTCCAGTATCCACAGCTTATCTTGGATGTTTACAAAAACTAAGTCTAGGGAAAGATTTAACTGAAGTTGATCTCATGAAACCGCCTGCAGGTTTTCCTGATTCTTGCATCAAGTTTTATAAACACGAACTTCGATTCCTAGCTTCAACAAGGAAATTTTTATTTGGAAGTGGTGTTTTTTTATTTGATCGTTTGCACATAGGTACAACCTCTGCAGATGCAATTGGTTTCAAAGGTTGCAATGAAATTGATGGACCGTATGCTGATTATATTGAAACAGTTTTTGGAAAACCTGTTCTGCTTTCAGGTCCTGTGTTACCTGAGCCAACAAATACAACACTAGAGGAAAAATGGATTTCATGGCTTAAGGGATTCAAAAATGGTTCTGTGGTTTTTTGTGCATATGGAAGTGAAGGTCCATTAGAACAAAATCAATTTCAAGAGTTGTTGCTTGGTCTTGAGTTAACAGGTTTTCCATTTCTTGCAGCACTTAAGCCACCTATTGGATTTGAAACAATTGAAGAAGCTTTACCAGAAGGGTTCAATGAAAGGATAAAAGGAAAAGGGATTGTGTATGGAAGTTGGATTCAACAACAGTTGATTTTAGAACACCCTTCTGTTGGATGTTTCATAACACACTGTGGAGCTGCTTCTATAACTGAGGGACTTGTTAACACGTGTCAGCTGGTGTTGTTGCCACGTCTTGGTTCCGATCATATCATGAATGCAAGAGTGATGAGTTCAAAATTTATGGTTGGTGTGGAAGTTGAGAAAGGTGATGAAGATGGATTGTTTACAAAAGAAAGTGTGTGCAAAGCTGTGAAGATTGTGATGGATGATGAGAATGAGGTTGGAAAAGAAGTAAGGGAAAATCATGCCAAAATGAGAAACTTTTTATTGTGCAGCAATTTAGAATCTTCATGTGTTGATAGTTTCTGTCAAAAACTTTATGATTTGCTCTAG

Protein sequence

>MS.gene065243.t1

MDAPSPLHIAMFPWFAMGHFTPYLHLSNKLALRGHKISFFIPKNTLNKLQHLNLHPNLITFVPITVPHVNGLPHDAETSSDVPFSLVPLIATAMDQTEKDIELLLKEIRPQIVFFDFQYWLPKLTINLGIKSLQYIILTPVSTAYLGCLQKLSLGKDLTEVDLMKPPAGFPDSCIKFYKHELRFLASTRKFLFGSGVFLFDRLHIGTTSADAIGFKGCNEIDGPYADYIETVFGKPVLLSGPVLPEPTNTTLEEKWISWLKGFKNGSVVFCAYGSEGPLEQNQFQELLLGLELTGFPFLAALKPPIGFETIEEALPEGFNERIKGKGIVYGSWIQQQLILEHPSVGCFITHCGAASITEGLVNTCQLVLLPRLGSDHIMNARVMSSKFMVGVEVEKGDEDGLFTKESVCKAVKIVMDDENEVGKEVRENHAKMRNFLLCSNLESSCVDSFCQKLYDLL