AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene69839


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69839.t1 MTR_2g083480 81.699 459 83 1 1 459 1 458 0.0 764
MS.gene69839.t1 MTR_2g083420 79.956 459 67 2 1 459 1 434 0.0 750
MS.gene69839.t1 MTR_2g083390 79.956 459 67 2 1 459 1 434 0.0 748
MS.gene69839.t1 MTR_2g083430 75.817 459 110 1 1 459 1 458 0.0 687
MS.gene69839.t1 MTR_2g083380 66.013 459 155 1 1 459 18 475 0.0 606
MS.gene69839.t1 MTR_2g083490 64.706 459 161 1 1 459 1 458 0.0 602
MS.gene69839.t1 MTR_4g079250 60.087 461 179 4 1 459 1 458 0.0 567
MS.gene69839.t1 MTR_4g079270 59.436 461 182 4 1 459 1 458 0.0 560
MS.gene69839.t1 MTR_2g083360 63.656 454 59 5 6 459 27 374 0.0 533
MS.gene69839.t1 MTR_2g014900 57.174 453 192 2 7 459 6 456 0.0 530
MS.gene69839.t1 MTR_1g090270 41.215 461 252 11 7 458 14 464 1.16e-110 335
MS.gene69839.t1 MTR_2g086283 57.708 253 55 2 206 458 135 335 2.81e-93 286
MS.gene69839.t1 MTR_2g086283 63.846 130 46 1 11 140 1 129 1.04e-48 170
MS.gene69839.t1 MTR_4g059370 40.514 311 171 5 154 458 89 391 1.07e-73 237
MS.gene69839.t1 MTR_8g068360 32.568 479 285 15 2 459 6 467 1.54e-68 226
MS.gene69839.t1 MTR_8g068330 31.172 478 296 15 1 459 1 464 7.57e-66 219
MS.gene69839.t1 MTR_4g123553 33.190 464 277 14 6 455 13 457 1.50e-65 218
MS.gene69839.t1 MTR_7g067330 32.043 465 263 13 2 455 3 425 9.30e-64 212
MS.gene69839.t1 MTR_8g068340 30.388 464 308 10 2 455 6 464 1.69e-63 213
MS.gene69839.t1 MTR_6g042310 32.613 463 279 14 7 455 17 460 8.83e-62 208
MS.gene69839.t1 MTR_2g008226 32.479 468 289 14 6 455 8 466 1.59e-60 205
MS.gene69839.t1 MTR_2g008225 30.149 471 297 13 2 456 9 463 2.29e-59 202
MS.gene69839.t1 MTR_6g036650 29.916 478 291 14 1 455 11 467 5.21e-59 201
MS.gene69839.t1 MTR_7g067120 31.317 463 265 14 2 453 3 423 5.70e-59 200
MS.gene69839.t1 MTR_2g008220 30.638 470 296 12 2 456 8 462 5.81e-59 201
MS.gene69839.t1 MTR_2g014930 40.345 290 92 6 17 306 9 217 9.05e-57 188
MS.gene69839.t1 MTR_2g046620 30.968 465 286 14 6 455 14 458 1.15e-56 194
MS.gene69839.t1 MTR_4g077960 30.201 447 271 16 17 445 1 424 6.74e-52 181
MS.gene69839.t1 MTR_2g083440 77.451 102 23 0 358 459 11 112 6.66e-51 168
MS.gene69839.t1 MTR_4g079280 40.611 229 90 3 11 239 1 183 2.20e-50 169
MS.gene69839.t1 MTR_3g435310 29.621 449 261 13 6 451 16 412 5.27e-49 173
MS.gene69839.t1 MTR_8g007650 30.455 440 277 11 7 428 6 434 2.54e-46 167
MS.gene69839.t1 MTR_8g007565 30.227 440 278 11 7 428 6 434 2.65e-46 167
MS.gene69839.t1 MTR_1g090280 45.503 189 91 5 262 439 108 295 8.99e-44 156
MS.gene69839.t1 MTR_5g066410 27.912 455 278 10 11 442 1 428 5.54e-43 157
MS.gene69839.t1 MTR_8g066610 28.088 502 295 20 1 458 1 480 1.22e-34 135
MS.gene69839.t1 MTR_5g087620 26.778 478 296 17 8 444 10 474 9.74e-32 127
MS.gene69839.t1 MTR_8g071070 26.667 480 314 15 5 458 4 471 4.10e-31 125
MS.gene69839.t1 MTR_4g031800 26.543 486 305 17 6 459 7 472 5.98e-31 125
MS.gene69839.t1 MTR_6g023665 27.679 448 281 14 9 429 14 445 6.55e-30 122
MS.gene69839.t1 MTR_2g098430 24.947 469 296 19 9 441 7 455 2.47e-29 120
MS.gene69839.t1 MTR_0009s0240 26.829 410 273 13 5 398 4 402 4.04e-29 119
MS.gene69839.t1 MTR_1g062380 27.137 468 288 19 5 433 13 466 9.03e-29 119
MS.gene69839.t1 MTR_4g485590 28.537 410 234 15 8 395 9 381 2.04e-28 116
MS.gene69839.t1 MTR_8g009050 26.752 471 270 17 7 435 5 442 2.17e-27 114
MS.gene69839.t1 MTR_8g465670 26.856 458 263 16 9 425 8 434 3.02e-27 114
MS.gene69839.t1 MTR_4g485620 26.136 440 288 13 20 434 1 428 1.93e-26 111
MS.gene69839.t1 MTR_8g009055 26.957 460 283 18 7 435 5 442 2.06e-26 111
MS.gene69839.t1 MTR_5g045970 26.752 471 285 15 5 433 13 465 2.74e-26 111
MS.gene69839.t1 MTR_6g038220 24.736 473 297 16 8 455 11 449 2.92e-26 111
MS.gene69839.t1 MTR_6g488280 27.232 448 283 14 9 429 7 438 3.76e-26 110
MS.gene69839.t1 MTR_0428s0010 27.232 448 283 14 9 429 7 438 3.76e-26 110
MS.gene69839.t1 MTR_8g027885 27.669 459 278 17 6 437 16 447 8.93e-26 110
MS.gene69839.t1 MTR_6g005600 35.897 195 105 4 256 437 255 442 1.23e-25 109
MS.gene69839.t1 MTR_8g027870 26.305 479 259 18 6 437 16 447 1.83e-25 108
MS.gene69839.t1 MTR_8g006220 25.275 455 282 12 9 425 7 441 3.33e-25 108
MS.gene69839.t1 MTR_4g485630 26.030 461 291 17 7 437 8 448 5.02e-25 107
MS.gene69839.t1 MTR_7g117170 37.569 181 97 5 260 428 268 444 5.16e-25 107
MS.gene69839.t1 MTR_3g009510 32.719 217 127 5 237 437 241 454 5.64e-25 107
MS.gene69839.t1 MTR_8g006710 25.223 448 293 16 9 429 7 439 7.52e-25 107
MS.gene69839.t1 MTR_7g070740 24.520 469 293 14 7 434 10 458 7.90e-25 107
MS.gene69839.t1 MTR_7g013180 26.118 425 286 12 8 420 5 413 1.77e-24 105
MS.gene69839.t1 MTR_7g070660 23.673 452 291 15 7 422 10 443 2.25e-24 105
MS.gene69839.t1 MTR_6g033625 25.217 460 287 15 9 435 5 440 2.33e-24 105
MS.gene69839.t1 MTR_8g006730 34.653 202 117 5 242 429 240 440 2.88e-24 105
MS.gene69839.t1 MTR_4g128720 25.482 467 273 19 7 441 14 437 3.58e-24 105
MS.gene69839.t1 MTR_8g008990 26.190 462 286 17 7 435 5 444 3.62e-24 105
MS.gene69839.t1 MTR_4g117980 24.295 461 287 15 6 425 9 448 5.99e-24 104
MS.gene69839.t1 MTR_0078s0060 34.043 188 110 5 260 437 259 442 7.12e-24 104
MS.gene69839.t1 MTR_0184s0030 34.272 213 115 7 234 426 230 437 7.62e-24 104
MS.gene69839.t1 MTR_6g033615 26.327 452 278 17 9 435 5 426 8.85e-24 103
MS.gene69839.t1 MTR_6g038230 25.259 483 291 18 8 459 11 454 1.02e-23 103
MS.gene69839.t1 MTR_5g035560 24.486 486 290 16 7 457 10 453 1.77e-23 103
MS.gene69839.t1 MTR_8g012635 34.259 216 116 8 237 432 242 451 2.16e-23 102
MS.gene69839.t1 MTR_8g466240 26.353 425 261 15 1 399 1 399 2.86e-23 102
MS.gene69839.t1 MTR_7g013220 25.482 467 284 19 8 445 5 436 3.01e-23 102
MS.gene69839.t1 MTR_8g009063 26.327 471 273 18 7 437 12 448 3.35e-23 102
MS.gene69839.t1 MTR_6g038240 33.511 188 111 7 249 436 258 431 3.67e-23 102
MS.gene69839.t1 MTR_8g077590 28.674 279 178 6 166 429 168 440 3.79e-23 102
MS.gene69839.t1 MTR_7g070810 24.434 442 298 13 7 422 8 439 4.83e-23 102
MS.gene69839.t1 MTR_0184s0040 32.979 188 112 5 260 437 275 458 5.62e-23 101
MS.gene69839.t1 MTR_0078s0190 32.979 188 112 5 260 437 275 458 5.62e-23 101
MS.gene69839.t1 MTR_7g102460 25.957 470 276 21 7 428 8 453 5.69e-23 101
MS.gene69839.t1 MTR_4g024020 24.784 464 292 18 7 428 8 456 6.48e-23 101
MS.gene69839.t1 MTR_8g012730 32.258 217 128 5 229 429 69 282 6.64e-23 99.4
MS.gene69839.t1 MTR_8g009073 27.039 466 273 21 7 435 5 440 7.00e-23 101
MS.gene69839.t1 MTR_3g069690 33.520 179 110 5 258 435 255 425 7.98e-23 100
MS.gene69839.t1 MTR_0078s0010 35.484 186 106 5 260 435 260 441 9.77e-23 100
MS.gene69839.t1 MTR_6g038200 24.520 469 304 18 8 455 11 450 1.21e-22 100
MS.gene69839.t1 MTR_7g070780 23.605 466 305 13 5 434 8 458 1.25e-22 100
MS.gene69839.t1 MTR_8g006270 24.879 414 253 14 43 428 53 436 1.40e-22 100
MS.gene69839.t1 MTR_1g107350 25.793 473 284 21 1 435 1 444 1.80e-22 100
MS.gene69839.t1 MTR_7g070940 23.596 445 307 13 7 428 8 442 2.07e-22 100
MS.gene69839.t1 MTR_7g013200 33.514 185 111 6 260 444 252 424 2.11e-22 99.8
MS.gene69839.t1 MTR_1g019520 34.921 189 108 5 258 435 4 188 2.58e-22 95.5
MS.gene69839.t1 MTR_1g107315 26.049 453 266 17 1 413 1 424 3.04e-22 99.4
MS.gene69839.t1 MTR_2g034990 24.070 457 299 15 1 423 4 446 3.20e-22 99.4
MS.gene69839.t1 MTR_5g035580 31.884 207 131 5 253 459 257 453 4.23e-22 99.0
MS.gene69839.t1 MTR_2g046820 32.609 230 141 6 237 455 236 462 6.05e-22 98.6
MS.gene69839.t1 MTR_5g045960 26.305 479 294 21 7 444 8 468 6.74e-22 98.6
MS.gene69839.t1 MTR_8g012650 32.243 214 124 5 237 436 242 448 6.82e-22 98.6
MS.gene69839.t1 MTR_8g009073 33.023 215 126 7 235 435 101 311 6.93e-22 96.7
MS.gene69839.t1 MTR_8g064880 26.304 460 254 21 5 413 6 431 7.02e-22 98.6
MS.gene69839.t1 MTR_7g102490 25.486 463 289 17 7 428 8 455 7.05e-22 98.6
MS.gene69839.t1 MTR_8g074550 22.672 494 293 17 1 435 1 464 9.54e-22 98.2
MS.gene69839.t1 MTR_6g033725 30.380 237 143 6 217 435 205 437 1.04e-21 97.8
MS.gene69839.t1 MTR_7g102560 30.677 251 149 5 202 428 203 452 1.46e-21 97.4
MS.gene69839.t1 MTR_3g049970 25.673 483 268 20 3 435 4 445 1.56e-21 97.4
MS.gene69839.t1 MTR_4g117950 25.167 449 280 14 6 423 4 427 1.70e-21 97.1
MS.gene69839.t1 MTR_7g047030 34.409 186 108 5 260 435 260 441 1.86e-21 97.1
MS.gene69839.t1 MTR_7g047270 34.409 186 108 5 260 435 260 441 1.86e-21 97.1
MS.gene69839.t1 MTR_4g082810 27.619 420 259 15 7 398 6 408 1.86e-21 96.7
MS.gene69839.t1 MTR_8g009067 34.043 188 110 5 258 435 139 322 2.03e-21 95.5
MS.gene69839.t1 MTR_7g070610 23.340 467 290 16 7 428 12 455 2.51e-21 97.1
MS.gene69839.t1 MTR_7g046490 34.211 190 111 4 256 433 252 439 2.74e-21 96.7
MS.gene69839.t1 MTR_7g102550 24.948 485 311 18 8 453 9 479 3.03e-21 96.7
MS.gene69839.t1 MTR_8g009067 34.043 188 110 5 258 435 257 440 3.28e-21 96.3
MS.gene69839.t1 MTR_5g098930 23.327 493 309 15 7 457 4 469 3.93e-21 96.3
MS.gene69839.t1 MTR_3g009490 35.329 167 92 4 284 437 3 166 5.65e-21 90.9
MS.gene69839.t1 MTR_3g069710 33.005 203 128 6 258 458 258 454 6.37e-21 95.5
MS.gene69839.t1 MTR_7g055710 23.326 463 306 13 7 434 10 458 9.44e-21 95.1
MS.gene69839.t1 MTR_2g059240 25.120 418 279 10 2 398 8 412 1.20e-20 94.7
MS.gene69839.t1 MTR_2g046750 32.174 230 142 6 237 455 239 465 1.26e-20 94.7
MS.gene69839.t1 MTR_7g070910 23.011 465 310 14 5 434 8 459 1.64e-20 94.4
MS.gene69839.t1 MTR_8g012630 32.258 186 108 4 260 429 206 389 1.97e-20 93.6
MS.gene69839.t1 MTR_8g006260 30.986 213 126 8 242 436 246 455 2.08e-20 94.0
MS.gene69839.t1 MTR_1g019510 33.862 189 110 5 258 435 255 439 2.12e-20 94.0
MS.gene69839.t1 MTR_7g070800 23.701 481 283 16 5 434 3 450 2.29e-20 94.0
MS.gene69839.t1 MTR_1g032490 26.144 459 256 18 2 413 4 426 2.76e-20 93.6
MS.gene69839.t1 MTR_2g040530 29.167 264 157 7 220 455 203 464 3.99e-20 93.2
MS.gene69839.t1 MTR_8g083280 30.837 227 130 8 242 457 249 459 4.59e-20 92.8
MS.gene69839.t1 MTR_8g083290 34.637 179 110 5 258 435 267 439 5.42e-20 92.8
MS.gene69839.t1 MTR_5g019580 30.544 239 146 6 237 457 265 501 6.99e-20 92.4
MS.gene69839.t1 MTR_5g019580 30.544 239 146 6 237 457 241 477 7.71e-20 92.4
MS.gene69839.t1 MTR_7g071040 23.011 465 310 13 5 434 14 465 9.16e-20 92.0
MS.gene69839.t1 MTR_0536s0010 24.777 448 282 15 6 423 19 441 1.70e-19 91.3
MS.gene69839.t1 MTR_8g012745 27.336 289 183 10 162 429 160 442 1.79e-19 91.3
MS.gene69839.t1 MTR_7g117405 34.783 184 107 5 260 434 276 455 2.01e-19 90.9
MS.gene69839.t1 MTR_6g035185 22.766 470 299 16 1 428 4 451 2.02e-19 90.9
MS.gene69839.t1 MTR_7g013240 31.868 182 112 6 260 441 252 421 2.83e-19 90.1
MS.gene69839.t1 MTR_2g035020 23.517 472 307 17 1 437 4 456 3.42e-19 90.5
MS.gene69839.t1 MTR_5g098960 31.897 232 134 9 234 455 229 446 3.42e-19 90.1
MS.gene69839.t1 MTR_6g013900 33.143 175 103 6 256 428 285 447 3.44e-19 90.1
MS.gene69839.t1 MTR_3g079480 24.622 463 281 19 8 428 21 457 3.57e-19 90.5
MS.gene69839.t1 MTR_4g128690 23.276 464 284 17 1 435 8 428 3.76e-19 90.1
MS.gene69839.t1 MTR_7g102450 35.227 176 102 4 265 429 267 441 4.18e-19 90.1
MS.gene69839.t1 MTR_3g084520 31.414 191 118 6 254 437 266 450 4.63e-19 89.7
MS.gene69839.t1 MTR_8g088560 30.172 232 132 8 237 450 229 448 5.19e-19 89.7
MS.gene69839.t1 MTR_5g090610 27.076 277 173 7 187 439 173 444 6.30e-19 89.4
MS.gene69839.t1 MTR_3g084530 29.680 219 125 7 242 437 238 450 8.67e-19 89.0
MS.gene69839.t1 MTR_5g067170 32.022 178 106 4 260 423 268 444 9.58e-19 89.0
MS.gene69839.t1 MTR_3g084540 28.767 219 128 6 242 437 238 451 9.80e-19 89.0
MS.gene69839.t1 MTR_1g107360 34.078 179 106 5 258 435 270 437 1.21e-18 88.6
MS.gene69839.t1 MTR_5g090660 29.075 227 136 7 235 439 233 456 1.54e-18 88.6
MS.gene69839.t1 MTR_6g033675 28.992 238 142 8 220 435 208 440 1.79e-18 88.2
MS.gene69839.t1 MTR_7g102520 36.025 161 101 2 255 414 276 435 1.88e-18 88.2
MS.gene69839.t1 MTR_6g033660 32.584 178 114 4 260 435 266 439 1.93e-18 88.2
MS.gene69839.t1 MTR_6g038300 31.217 189 117 6 249 437 258 433 1.95e-18 87.8
MS.gene69839.t1 MTR_8g044140 24.631 406 259 12 49 422 22 412 2.04e-18 87.8
MS.gene69839.t1 MTR_4g094920 28.922 204 136 6 258 455 279 479 2.05e-18 88.2
MS.gene69839.t1 MTR_3g479520 23.123 506 319 21 1 459 1 483 2.49e-18 87.8
MS.gene69839.t1 MTR_0891s0010 30.409 171 110 4 258 428 97 258 2.58e-18 85.5
MS.gene69839.t1 MTR_8g064870 25.105 478 275 21 5 435 8 449 2.66e-18 87.4
MS.gene69839.t1 MTR_6g014170 29.897 194 122 6 256 447 268 449 3.14e-18 87.4
MS.gene69839.t1 MTR_5g027210 25.830 271 164 6 213 451 212 477 3.55e-18 87.0
MS.gene69839.t1 MTR_7g013260 34.783 161 97 6 260 419 253 406 3.72e-18 87.0
MS.gene69839.t1 MTR_6g035265 29.630 189 116 5 255 428 256 442 3.76e-18 87.0
MS.gene69839.t1 MTR_5g090700 30.357 224 133 7 237 439 239 460 3.86e-18 87.0
MS.gene69839.t1 MTR_4g095008 24.431 483 313 19 2 455 5 464 4.70e-18 87.0
MS.gene69839.t1 MTR_8g008970 31.915 188 114 5 258 435 257 440 4.79e-18 87.4
MS.gene69839.t1 MTR_8g008970 32.597 181 108 5 258 437 596 763 1.19e-17 86.3
MS.gene69839.t1 MTR_8g090095 27.586 261 167 8 210 451 218 475 4.87e-18 86.7
MS.gene69839.t1 MTR_4g117960 24.026 462 290 15 1 423 6 445 5.57e-18 86.7
MS.gene69839.t1 MTR_7g070930 22.899 476 311 15 1 434 1 462 6.16e-18 86.7
MS.gene69839.t1 MTR_5g090620 26.641 259 151 8 218 439 203 459 9.70e-18 85.9
MS.gene69839.t1 MTR_2g035040 29.381 194 118 5 258 437 173 361 9.93e-18 85.1
MS.gene69839.t1 MTR_0288s0020 29.204 226 141 8 211 430 230 442 1.00e-17 85.9
MS.gene69839.t1 MTR_7g011470 27.719 285 171 12 171 435 172 441 1.24e-17 85.5
MS.gene69839.t1 MTR_5g072820 22.624 442 301 15 8 435 10 424 1.78e-17 84.7
MS.gene69839.t1 MTR_7g080935 29.947 187 120 5 255 441 259 434 1.94e-17 84.7
MS.gene69839.t1 MTR_1g029540 22.629 464 307 18 13 451 19 455 1.94e-17 84.7
MS.gene69839.t1 MTR_6g013920 29.016 193 120 6 256 437 285 471 2.01e-17 84.7
MS.gene69839.t1 MTR_8g032950 23.851 457 297 17 6 428 10 449 2.04e-17 84.7
MS.gene69839.t1 MTR_6g014250 29.016 193 121 7 258 447 286 465 2.15e-17 84.7
MS.gene69839.t1 MTR_4g485640 29.060 234 137 8 221 428 409 639 2.29e-17 85.1
MS.gene69839.t1 MTR_7g080950 31.217 189 117 7 254 442 253 428 2.51e-17 84.3
MS.gene69839.t1 MTR_6g014220 30.000 180 112 6 258 435 286 453 2.51e-17 84.7
MS.gene69839.t1 MTR_3g479610 27.586 232 145 8 211 428 59 281 2.57e-17 83.2
MS.gene69839.t1 MTR_7g011470 27.437 277 167 11 178 435 176 437 2.70e-17 84.3
MS.gene69839.t1 MTR_6g014020 30.682 176 108 6 256 427 286 451 5.10e-17 83.6
MS.gene69839.t1 MTR_5g072840 22.072 444 301 14 8 435 10 424 5.20e-17 83.6
MS.gene69839.t1 MTR_5g029800 31.111 180 109 4 258 423 264 442 5.96e-17 83.6
MS.gene69839.t1 MTR_1g107375 29.437 231 133 9 220 435 214 429 6.65e-17 83.2
MS.gene69839.t1 MTR_7g080940 29.412 187 121 5 255 441 259 434 7.76e-17 82.8
MS.gene69839.t1 MTR_5g072810 22.272 449 297 17 8 435 12 429 8.43e-17 82.8
MS.gene69839.t1 MTR_4g008630 25.984 254 170 7 200 438 191 441 9.74e-17 82.8
MS.gene69839.t1 MTR_5g058320 25.581 473 273 23 4 430 7 446 1.12e-16 82.4
MS.gene69839.t1 MTR_2g008210 31.977 172 108 6 258 428 282 445 1.13e-16 82.4
MS.gene69839.t1 MTR_6g014200 30.220 182 113 6 256 435 283 452 1.27e-16 82.4
MS.gene69839.t1 MTR_5g090630 27.848 237 148 7 242 457 233 467 1.56e-16 82.0
MS.gene69839.t1 MTR_7g012120 30.899 178 108 4 260 423 272 448 1.72e-16 82.0
MS.gene69839.t1 MTR_3g479490 29.586 169 110 4 260 428 283 442 1.75e-16 82.0
MS.gene69839.t1 MTR_4g108250 23.077 468 303 16 7 433 10 461 2.33e-16 81.6
MS.gene69839.t1 MTR_6g014190 30.337 178 110 6 260 435 97 262 2.68e-16 79.7
MS.gene69839.t1 MTR_6g013990 28.571 182 116 6 256 435 284 453 2.95e-16 81.3
MS.gene69839.t1 MTR_5g072860 22.707 458 302 15 8 441 18 447 2.98e-16 81.3
MS.gene69839.t1 MTR_6g014050 30.055 183 112 7 256 435 287 456 3.12e-16 81.3
MS.gene69839.t1 MTR_8g059425 28.492 179 117 6 258 430 286 459 3.43e-16 81.3
MS.gene69839.t1 MTR_7g070870 22.794 408 286 12 4 395 15 409 3.65e-16 80.9
MS.gene69839.t1 MTR_6g011340 25.368 272 171 11 182 435 198 455 3.96e-16 80.9
MS.gene69839.t1 MTR_7g070860 22.363 474 280 15 7 434 6 437 4.07e-16 80.9
MS.gene69839.t1 MTR_5g016480 25.738 237 157 7 237 457 239 472 4.42e-16 80.9
MS.gene69839.t1 MTR_7g071050 28.708 209 130 7 258 456 231 430 4.78e-16 80.5
MS.gene69839.t1 MTR_5g072830 22.297 444 300 15 8 435 10 424 4.93e-16 80.5
MS.gene69839.t1 MTR_4g082820 32.461 191 109 4 237 407 234 424 5.54e-16 80.5
MS.gene69839.t1 MTR_1g107365 29.851 201 115 7 228 413 258 447 5.73e-16 80.5
MS.gene69839.t1 MTR_8g007585 29.444 180 113 6 258 435 200 367 7.45e-16 79.7
MS.gene69839.t1 MTR_8g056740 25.862 232 158 5 211 432 111 338 8.75e-16 79.3
MS.gene69839.t1 MTR_4g117890 28.415 183 115 4 258 425 260 441 9.90e-16 79.7
MS.gene69839.t1 MTR_7g470610 32.500 160 103 4 254 410 128 285 1.42e-15 77.4
MS.gene69839.t1 MTR_7g070583 32.500 160 103 4 254 410 128 285 1.42e-15 77.4
MS.gene69839.t1 MTR_5g040030 25.292 257 159 8 216 448 224 471 1.50e-15 79.3
MS.gene69839.t1 MTR_6g013450 28.177 181 119 5 256 430 287 462 1.84e-15 79.0
MS.gene69839.t1 MTR_6g014270 29.121 182 115 6 256 435 285 454 1.96e-15 79.0
MS.gene69839.t1 MTR_3g031450 25.561 223 136 5 221 428 213 420 2.02e-15 78.6
MS.gene69839.t1 MTR_6g014240 28.571 182 116 6 256 435 253 422 2.32e-15 78.6
MS.gene69839.t1 MTR_4g118000 23.423 444 282 17 6 418 10 426 2.46e-15 78.6
MS.gene69839.t1 MTR_3g008010 28.729 181 113 7 258 435 286 453 2.75e-15 78.2
MS.gene69839.t1 MTR_6g014040 29.508 183 114 6 256 428 287 464 3.41e-15 78.2
MS.gene69839.t1 MTR_5g090580 24.638 276 171 8 217 457 203 476 3.56e-15 77.8
MS.gene69839.t1 MTR_6g014150 28.962 183 115 6 256 428 283 460 4.60e-15 77.8
MS.gene69839.t1 MTR_0536s0020 28.415 183 115 4 258 425 265 446 4.64e-15 77.8
MS.gene69839.t1 MTR_6g014310 26.860 242 145 11 211 435 230 456 5.06e-15 77.4
MS.gene69839.t1 MTR_6g014290 27.933 179 113 7 260 435 288 453 2.37e-14 75.5
MS.gene69839.t1 MTR_5g016660 20.563 462 288 16 12 422 14 447 2.52e-14 75.5
MS.gene69839.t1 MTR_5g004940 35.294 119 75 2 258 375 197 314 4.73e-14 73.9
MS.gene69839.t1 MTR_1g107285 32.298 161 98 4 255 413 268 419 4.88e-14 74.3
MS.gene69839.t1 MTR_7g039550 25.681 257 146 9 221 448 5 245 3.10e-13 70.1
MS.gene69839.t1 MTR_1g040310 21.491 456 286 17 7 417 14 442 3.30e-13 72.0
MS.gene69839.t1 MTR_5g464810 29.714 175 106 7 258 429 286 446 3.83e-13 71.6
MS.gene69839.t1 MTR_5g064240 29.714 175 106 7 258 429 286 446 3.83e-13 71.6
MS.gene69839.t1 MTR_4g064987 24.183 459 282 21 18 447 18 439 4.11e-13 71.6
MS.gene69839.t1 MTR_4g064987 24.283 453 283 21 18 447 18 433 4.22e-13 71.2
MS.gene69839.t1 MTR_6g013960 28.671 143 95 4 256 396 286 423 4.83e-13 71.2
MS.gene69839.t1 MTR_7g080900 30.058 173 111 5 258 430 264 426 8.63e-13 70.5
MS.gene69839.t1 MTR_8g009840 31.013 158 93 3 275 418 333 488 2.23e-12 69.3
MS.gene69839.t1 MTR_6g014300 26.582 158 102 6 280 435 296 441 3.86e-12 68.6
MS.gene69839.t1 MTR_5g070090 28.947 228 136 11 222 436 228 442 4.93e-12 68.2
MS.gene69839.t1 MTR_6g078320 26.667 195 133 2 237 421 252 446 7.39e-12 67.8
MS.gene69839.t1 MTR_0477s0010 30.769 143 92 4 256 396 123 260 8.47e-12 66.6
MS.gene69839.t1 MTR_5g031840 31.915 141 88 5 258 396 272 406 2.27e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69839.t1 AT4G27570 43.202 456 242 6 7 459 6 447 4.49e-135 397
MS.gene69839.t1 AT5G54010 44.079 456 243 6 5 459 3 447 2.29e-134 395
MS.gene69839.t1 AT4G27560 42.982 456 243 6 7 459 6 447 5.65e-133 391
MS.gene69839.t1 AT5G53990 43.956 455 235 7 7 459 5 441 1.02e-132 390
MS.gene69839.t1 AT5G54060 43.384 461 251 8 5 459 10 466 1.62e-132 391
MS.gene69839.t1 AT4G09500 42.952 454 241 6 7 459 5 441 7.33e-130 383
MS.gene69839.t1 AT1G64920 42.266 459 241 8 7 459 5 445 2.50e-129 382
MS.gene69839.t1 AT2G22930 44.053 454 236 6 7 459 5 441 2.19e-128 379
MS.gene69839.t1 AT1G64910 41.830 459 239 8 7 459 5 441 4.23e-125 371
MS.gene69839.t1 AT3G29630 41.189 454 248 5 5 455 3 440 5.91e-125 371
MS.gene69839.t1 AT3G29630 40.576 451 229 6 5 455 3 414 2.66e-117 350
MS.gene69839.t1 AT4G09500 40.839 453 227 7 7 459 5 416 9.87e-116 346
MS.gene69839.t1 AT1G50580 40.529 454 249 7 5 455 3 438 1.67e-113 342
MS.gene69839.t1 AT2G22590 33.833 467 277 15 7 455 14 466 2.64e-70 231
MS.gene69839.t1 AT5G49690 33.030 439 274 10 7 438 9 434 2.26e-66 220
MS.gene69839.t1 AT5G65550 30.444 473 297 16 1 455 1 459 1.86e-59 202
MS.gene69839.t1 AT2G22930 38.532 218 119 3 7 224 5 207 4.27e-44 156
MS.gene69839.t1 AT2G22930 42.169 83 47 1 377 459 208 289 7.68e-13 69.3
MS.gene69839.t1 AT5G03490 26.281 449 286 13 6 436 17 438 8.80e-34 132
MS.gene69839.t1 AT5G12890 26.866 469 293 18 4 438 6 458 5.12e-32 128
MS.gene69839.t1 AT4G36770 27.887 459 281 18 7 436 3 440 4.98e-31 124
MS.gene69839.t1 AT1G51210 26.697 442 280 12 8 434 20 432 1.53e-30 123
MS.gene69839.t1 AT1G73880 25.641 468 291 16 2 429 8 458 2.45e-30 123
MS.gene69839.t1 AT2G16890 27.742 465 293 23 8 446 9 456 2.94e-30 122
MS.gene69839.t1 AT2G36750 29.399 466 265 20 6 428 8 452 3.76e-29 120
MS.gene69839.t1 AT2G15490 26.049 453 294 14 7 428 6 448 4.51e-29 119
MS.gene69839.t1 AT2G15490 26.096 456 293 15 7 428 6 451 4.69e-29 119
MS.gene69839.t1 AT2G15480 25.764 458 303 11 7 435 9 458 5.30e-29 119
MS.gene69839.t1 AT2G36800 26.638 458 293 15 5 428 9 457 8.80e-29 119
MS.gene69839.t1 AT4G34138 26.693 502 290 19 5 459 8 478 1.30e-28 118
MS.gene69839.t1 AT2G36770 28.051 467 277 20 6 429 12 462 1.39e-28 118
MS.gene69839.t1 AT2G15480 26.136 440 288 11 7 417 9 440 1.88e-28 117
MS.gene69839.t1 AT1G10400 26.151 478 301 21 7 452 6 463 2.15e-28 117
MS.gene69839.t1 AT4G34131 26.052 499 301 19 2 455 4 479 2.37e-28 117
MS.gene69839.t1 AT2G36780 28.266 467 269 20 7 428 13 458 1.31e-27 115
MS.gene69839.t1 AT2G16890 27.506 429 273 21 8 413 9 422 1.81e-27 114
MS.gene69839.t1 AT2G31750 24.837 459 296 13 1 437 1 432 2.17e-27 114
MS.gene69839.t1 AT2G31750 24.837 459 296 13 1 437 1 432 2.61e-27 114
MS.gene69839.t1 AT4G34135 26.439 469 260 17 7 429 10 439 2.66e-27 114
MS.gene69839.t1 AT3G50740 25.862 464 288 17 8 436 7 449 3.05e-27 114
MS.gene69839.t1 AT1G05675 26.889 450 280 18 8 435 6 428 4.79e-27 113
MS.gene69839.t1 AT5G14860 26.446 484 318 17 1 455 1 475 7.33e-27 113
MS.gene69839.t1 AT2G18570 24.576 472 289 17 1 435 1 442 8.74e-27 112
MS.gene69839.t1 AT2G18560 29.365 252 153 6 203 435 107 352 2.14e-25 107
MS.gene69839.t1 AT2G31790 25.417 480 299 18 8 459 8 456 3.61e-25 107
MS.gene69839.t1 AT3G53150 26.709 468 294 18 7 436 21 477 6.46e-25 107
MS.gene69839.t1 AT1G05680 26.549 452 279 18 8 435 6 428 7.71e-25 107
MS.gene69839.t1 AT2G36760 27.137 468 280 19 6 429 12 462 4.37e-24 105
MS.gene69839.t1 AT5G59580 26.293 464 301 18 8 455 9 447 1.25e-23 103
MS.gene69839.t1 AT1G01420 34.579 214 119 6 237 435 235 442 1.78e-23 103
MS.gene69839.t1 AT1G01420 34.579 214 119 6 237 435 238 445 1.89e-23 103
MS.gene69839.t1 AT2G36970 22.940 449 319 11 8 438 10 449 2.54e-23 102
MS.gene69839.t1 AT2G30140 24.681 470 304 17 8 457 13 452 4.16e-23 102
MS.gene69839.t1 AT4G15480 24.729 461 299 18 3 435 14 454 7.66e-23 101
MS.gene69839.t1 AT2G30140 24.034 466 313 16 8 457 13 453 3.26e-22 99.4
MS.gene69839.t1 AT5G66690 23.831 449 309 11 8 436 7 442 9.01e-22 98.2
MS.gene69839.t1 AT4G01070 33.645 214 124 6 237 436 235 444 1.01e-21 97.8
MS.gene69839.t1 AT2G29730 33.175 211 126 7 229 429 231 436 1.57e-21 97.4
MS.gene69839.t1 AT5G59590 25.161 465 306 18 8 455 10 449 2.35e-21 96.7
MS.gene69839.t1 AT2G43840 32.632 190 118 4 260 449 257 436 3.28e-21 96.3
MS.gene69839.t1 AT2G43840 32.632 190 118 4 260 449 257 436 3.40e-21 96.3
MS.gene69839.t1 AT2G43820 32.124 193 121 4 258 450 255 437 3.66e-21 95.9
MS.gene69839.t1 AT3G53160 25.160 469 293 21 1 428 1 452 6.16e-21 95.9
MS.gene69839.t1 AT2G30150 22.062 485 315 18 4 459 6 456 1.18e-20 94.7
MS.gene69839.t1 AT3G21560 25.502 498 296 18 4 459 8 472 1.31e-20 94.7
MS.gene69839.t1 AT3G46670 22.851 477 320 16 2 458 3 451 1.58e-20 94.4
MS.gene69839.t1 AT4G15490 23.210 461 309 15 1 435 1 442 3.79e-20 93.2
MS.gene69839.t1 AT2G36790 26.395 466 289 19 2 428 7 457 3.82e-20 93.2
MS.gene69839.t1 AT5G05860 24.045 445 295 15 7 436 8 424 4.10e-20 92.8
MS.gene69839.t1 AT1G07250 29.004 231 152 6 237 457 246 474 5.76e-20 92.8
MS.gene69839.t1 AT5G26310 23.109 476 316 13 8 453 7 462 7.73e-20 92.4
MS.gene69839.t1 AT4G15550 31.034 203 127 6 242 436 253 450 1.00e-19 92.0
MS.gene69839.t1 AT3G11340 31.667 180 111 6 258 435 251 420 3.65e-19 90.1
MS.gene69839.t1 AT3G46660 33.333 216 123 9 237 446 237 437 4.02e-19 90.1
MS.gene69839.t1 AT4G15500 29.952 207 131 7 258 458 267 465 6.17e-19 89.7
MS.gene69839.t1 AT2G30150 21.776 473 310 17 13 459 2 440 6.47e-19 89.4
MS.gene69839.t1 AT3G21790 28.794 257 159 6 221 455 224 478 1.38e-18 88.6
MS.gene69839.t1 AT5G05880 25.658 456 291 17 1 430 1 434 1.64e-18 88.2
MS.gene69839.t1 AT1G01390 32.524 206 117 7 242 429 257 458 3.70e-18 87.4
MS.gene69839.t1 AT1G01390 32.524 206 117 7 242 429 240 441 3.94e-18 87.0
MS.gene69839.t1 AT4G15280 29.439 214 133 4 260 457 296 507 4.76e-18 87.0
MS.gene69839.t1 AT4G15280 29.439 214 133 4 260 457 264 475 5.23e-18 86.7
MS.gene69839.t1 AT1G05560 28.571 231 144 7 242 457 225 449 6.32e-18 86.3
MS.gene69839.t1 AT3G22250 33.520 179 93 8 258 428 274 434 6.44e-18 86.3
MS.gene69839.t1 AT3G55700 31.527 203 123 8 249 446 249 440 6.53e-18 86.3
MS.gene69839.t1 AT1G05560 28.571 231 144 7 242 457 275 499 6.95e-18 86.7
MS.gene69839.t1 AT5G05890 26.693 251 166 8 202 437 198 445 7.44e-18 86.3
MS.gene69839.t1 AT3G21760 28.774 212 133 5 260 455 271 480 1.04e-17 85.9
MS.gene69839.t1 AT5G38040 25.054 467 288 21 16 455 18 449 1.05e-17 85.5
MS.gene69839.t1 AT4G15260 28.372 215 135 5 260 457 144 356 1.43e-17 84.3
MS.gene69839.t1 AT1G05530 26.908 249 158 6 223 453 206 448 1.79e-17 85.1
MS.gene69839.t1 AT3G55710 34.286 140 87 4 260 397 263 399 2.06e-17 84.7
MS.gene69839.t1 AT3G16520 30.208 192 123 4 260 447 263 447 2.25e-17 84.7
MS.gene69839.t1 AT3G21800 29.108 213 132 4 260 455 265 475 3.88e-17 84.0
MS.gene69839.t1 AT1G24100 28.947 190 126 4 260 449 268 448 5.06e-17 83.6
MS.gene69839.t1 AT3G16520 30.939 181 114 4 260 436 263 436 5.44e-17 83.6
MS.gene69839.t1 AT3G16520 30.939 181 114 4 260 436 263 436 5.48e-17 83.6
MS.gene69839.t1 AT2G29710 34.831 178 100 7 260 429 267 436 6.88e-17 83.2
MS.gene69839.t1 AT3G46690 30.244 205 133 6 198 395 191 392 2.09e-16 81.6
MS.gene69839.t1 AT3G21750 26.556 241 155 5 237 457 232 470 2.25e-16 81.6
MS.gene69839.t1 AT1G07260 27.511 229 154 6 237 455 245 471 3.09e-16 81.3
MS.gene69839.t1 AT1G78270 29.213 178 117 5 260 437 289 457 3.22e-16 81.3
MS.gene69839.t1 AT5G38010 24.421 475 278 21 8 448 10 437 4.95e-16 80.5
MS.gene69839.t1 AT1G06000 24.752 404 249 16 8 395 10 374 5.10e-16 80.5
MS.gene69839.t1 AT3G21780 28.505 214 135 5 260 457 259 470 5.16e-16 80.5
MS.gene69839.t1 AT1G22400 30.337 178 114 5 260 437 291 458 1.13e-15 79.7
MS.gene69839.t1 AT5G17030 27.083 240 151 9 203 434 207 430 1.29e-15 79.3
MS.gene69839.t1 AT2G28080 24.597 248 165 7 215 444 220 463 1.66e-15 79.0
MS.gene69839.t1 AT2G23250 30.412 194 127 5 260 451 244 431 2.38e-15 78.2
MS.gene69839.t1 AT1G22360 29.775 178 115 5 260 437 287 454 2.63e-15 78.6
MS.gene69839.t1 AT2G29740 30.348 201 130 7 237 429 250 448 2.76e-15 78.2
MS.gene69839.t1 AT4G14090 27.391 230 151 8 228 449 224 445 5.05e-15 77.4
MS.gene69839.t1 AT2G23260 29.379 177 117 5 260 436 262 430 8.88e-15 76.6
MS.gene69839.t1 AT1G22380 29.834 181 115 6 258 437 288 457 1.78e-14 75.9
MS.gene69839.t1 AT3G46720 30.500 200 114 7 237 428 229 411 9.31e-14 73.6
MS.gene69839.t1 AT1G22360 30.882 136 91 3 260 395 287 419 9.40e-13 70.5
MS.gene69839.t1 AT1G22340 26.404 178 122 4 260 437 290 458 6.21e-12 67.8
MS.gene69839.t1 AT3G46650 29.091 220 140 8 228 441 205 414 1.02e-11 67.0

Find 86 sgRNAs with CRISPR-Local

Find 99 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACTATCTTCAAACTGTTTA+TGG 0.065632 2.2:-13904010 MS.gene69839:CDS
GGAAAACCTGTTCTGCTTTC+AGG 0.116567 2.2:-13903989 MS.gene69839:CDS
TCAAAGTAAGCTGGTAATAT+TGG 0.222813 2.2:+13904274 None:intergenic
AAAGGAAAAGGGATTGTTTA+TGG 0.232535 2.2:-13903719 MS.gene69839:CDS
GCCACCAAATACAACTTTAA+AGG 0.232790 2.2:-13903951 MS.gene69839:CDS
ATCACAGTTCCTCATGTTAA+TGG 0.256113 2.2:-13904502 MS.gene69839:CDS
GGGTTTAGTGAAAGGGTTAA+AGG 0.333009 2.2:-13903737 MS.gene69839:CDS
AAGGGATTGTTTATGGAAGT+TGG 0.335805 2.2:-13903712 MS.gene69839:CDS
ACCCTTTCACTAAACCCTTC+AGG 0.349714 2.2:+13903743 None:intergenic
TTGCTTGGTCTTGAATTAAC+AGG 0.351707 2.2:-13903827 MS.gene69839:CDS
ATAAGAGGGAACAAAGAAAA+TGG 0.359166 2.2:+13904445 None:intergenic
TCCTTTAAAGTTGTATTTGG+TGG 0.360965 2.2:+13903950 None:intergenic
ACCTCTTATTGCTAATTTGT+TGG 0.362267 2.2:+13904612 None:intergenic
TTAACATGAGGAACTGTGAT+AGG 0.364501 2.2:+13904505 None:intergenic
TCAGTAAGCAAACTAGAGTT+TGG 0.376300 2.2:-13904130 MS.gene69839:CDS
GCAGCACTTAAGCCACCTAT+TGG 0.380205 2.2:-13903791 MS.gene69839:CDS
GGCTTAAGTGCTGCAAGAAA+TGG 0.387827 2.2:+13903800 None:intergenic
AGTGATGAGTTCAAAGTTCA+AGG 0.399604 2.2:-13903543 MS.gene69839:CDS
AGTTAATAAGATTTGGATGA+AGG 0.401162 2.2:+13904533 None:intergenic
GTGAAAGGGTTAAAGGAAAA+GGG 0.402436 2.2:-13903730 MS.gene69839:CDS
TTGTTGGAGAGACGGAGAAA+TGG 0.411680 2.2:+13904628 None:intergenic
AAAATGGGTTGCATGGCTTA+AGG 0.414943 2.2:-13903927 MS.gene69839:CDS
AGTGAAAGGGTTAAAGGAAA+AGG 0.420115 2.2:-13903731 MS.gene69839:CDS
AAATCAAAGAAAACTATTTG+TGG 0.424765 2.2:+13904364 None:intergenic
AAATGGGTTGCATGGCTTAA+GGG 0.427342 2.2:-13903926 MS.gene69839:CDS
TTATACGATCGCATTGGAAT+AGG 0.430219 2.2:-13904094 MS.gene69839:CDS
CAGTTTCTAGAGCTGTTGCT+TGG 0.434467 2.2:-13903842 MS.gene69839:CDS
TCTGTGGTTTATTGTGCATA+TGG 0.439244 2.2:-13903890 MS.gene69839:CDS
AAAGTTGTATTTGGTGGCTC+AGG 0.439316 2.2:+13903956 None:intergenic
CCCTCTTATTGCTACAGCCA+TGG 0.441738 2.2:-13904431 MS.gene69839:CDS
ACCTGAAGGGTTTAGTGAAA+GGG 0.441816 2.2:-13903744 MS.gene69839:CDS
TCAATCAACTCAAATCCAAT+AGG 0.441856 2.2:+13903776 None:intergenic
AGAGGACCTGAAAGCAGAAC+AGG 0.445486 2.2:+13903983 None:intergenic
AGAAACTGATTATGCTGTAA+TGG 0.452696 2.2:+13903857 None:intergenic
AAAGGTTGTAGAGAAATTGA+TGG 0.453691 2.2:-13904043 MS.gene69839:CDS
AATGTTTCCATGGTTTGCTA+TGG 0.456397 2.2:-13904662 MS.gene69839:CDS
ATGGATGATAAGAATGAAGT+TGG 0.460815 2.2:-13903443 MS.gene69839:CDS
TCCATGGCTGTAGCAATAAG+AGG 0.461979 2.2:+13904430 None:intergenic
TCCAACAAATTAGCAATAAG+AGG 0.462527 2.2:-13904613 MS.gene69839:CDS
TTGTTTATCTGTTTGATCCA+TGG 0.471266 2.2:+13904414 None:intergenic
AACTTGATGCATGAATCATC+AGG 0.482297 2.2:+13904181 None:intergenic
TTGGTGCTATTGCCACGTCT+TGG 0.486194 2.2:-13903590 MS.gene69839:CDS
GTTGAGAAAGGTGATGAAGA+TGG 0.486792 2.2:-13903509 MS.gene69839:CDS
TACCTGAAGGGTTTAGTGAA+AGG 0.490614 2.2:-13903745 MS.gene69839:CDS
TTGGACCGAGTATCATGTAT+TGG 0.494245 2.2:+13904293 None:intergenic
TTGAAGATGCTTTACCTGAA+GGG 0.497840 2.2:-13903757 MS.gene69839:CDS
ATGTTTCCATGGTTTGCTAT+GGG 0.504571 2.2:-13904661 MS.gene69839:CDS
TGCACATAGCAATGTTTCCA+TGG 0.504753 2.2:-13904672 MS.gene69839:CDS
TTGCTAATTTGTTGGAGAGA+CGG 0.513606 2.2:+13904620 None:intergenic
TCAGATGCAGTTGCTTTCAA+AGG 0.518452 2.2:-13904061 MS.gene69839:CDS
CTTCAGTTAAATCTCTACCT+TGG 0.530118 2.2:+13904233 None:intergenic
ATTGAAGATGCTTTACCTGA+AGG 0.532564 2.2:-13903758 MS.gene69839:CDS
CTAGTTTGCTTACTGAAGCT+AGG 0.545779 2.2:+13904137 None:intergenic
ATGAGTTCAAAGTTCAAGGT+TGG 0.547219 2.2:-13903539 MS.gene69839:CDS
CTTCTATTATACGATCGCAT+TGG 0.549848 2.2:-13904100 MS.gene69839:CDS
TTCAAAGTTCAAGGTTGGTG+TGG 0.552940 2.2:-13903534 MS.gene69839:CDS
TTGAGAAAGGTGATGAAGAT+GGG 0.554445 2.2:-13903508 MS.gene69839:CDS
TAACATGAGGAACTGTGATA+GGG 0.557835 2.2:+13904506 None:intergenic
TTGTTTCAGCATCAAGAGGA+AGG 0.558892 2.2:+13904479 None:intergenic
AAGGTTGTAGAGAAATTGAT+GGG 0.562891 2.2:-13904042 MS.gene69839:CDS
TGGAGCTGCTTCTATAACTG+AGG 0.562901 2.2:-13903633 MS.gene69839:CDS
CTCACAGAAACTATCAAGAC+AGG 0.563684 2.2:+13903355 None:intergenic
ATTGCTATGTGCAAAGGAGA+AGG 0.567370 2.2:+13904682 None:intergenic
GGGATTCAAACATGGTTCTG+TGG 0.569145 2.2:-13903906 MS.gene69839:CDS
TTTGGTGGCTCAGGTAAAAG+AGG 0.569758 2.2:+13903965 None:intergenic
GAAGTTGTTTCAGCATCAAG+AGG 0.578668 2.2:+13904475 None:intergenic
TCTTGCATTCATGATATGAT+CGG 0.585265 2.2:+13903565 None:intergenic
CAAAGCTGTGAAAATTGTGA+TGG 0.587557 2.2:-13903462 MS.gene69839:CDS
GTTATGAAACATCCAACAGA+AGG 0.588945 2.2:+13903662 None:intergenic
ACTTGTTAACACGTCTCAGT+TGG 0.589854 2.2:-13903609 MS.gene69839:CDS
GAATCATCAGGGAACTCTGA+AGG 0.590116 2.2:+13904193 None:intergenic
TGGCTTAAGGGATTCAAACA+TGG 0.590676 2.2:-13903914 MS.gene69839:CDS
GGAAACATTGCTATGTGCAA+AGG 0.601320 2.2:+13904676 None:intergenic
ATCAACTCAAATCCAATAGG+TGG 0.605154 2.2:+13903779 None:intergenic
AGCAAACTAGAGTTTGGCAG+TGG 0.611149 2.2:-13904124 MS.gene69839:CDS
ACTTGATGCATGAATCATCA+GGG 0.631590 2.2:+13904182 None:intergenic
TGTCTCCAATACATGATACT+CGG 0.631875 2.2:-13904298 MS.gene69839:CDS
GTTGGTGTGGAAGTTGAGAA+AGG 0.632692 2.2:-13903521 MS.gene69839:CDS
CCATGGCTGTAGCAATAAGA+GGG 0.634014 2.2:+13904431 None:intergenic
GGAGCTGCTTCTATAACTGA+GGG 0.647559 2.2:-13903632 MS.gene69839:CDS
AAGTGTCCCATAGCAAACCA+TGG 0.661811 2.2:+13904655 None:intergenic
AGAGGAAGGCCATTAACATG+AGG 0.680750 2.2:+13904493 None:intergenic
ATATGATCGGAACCAAGACG+TGG 0.688479 2.2:+13903578 None:intergenic
TTATGAAACATCCAACAGAA+GGG 0.698749 2.2:+13903663 None:intergenic
AATATACAAAGACAAAACCA+AGG 0.715036 2.2:-13904250 MS.gene69839:CDS
GGATGTTTCATAACACACTG+TGG 0.766209 2.2:-13903653 MS.gene69839:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTCTTTGATTTTCAATAT+TGG - chr2.2:13903671-13903690 MS.gene69839:CDS 15.0%
!! AAATCAAAGAAAACTATTTG+TGG + chr2.2:13903664-13903683 None:intergenic 20.0%
!!! ATACAACTTTAAAGGAAAAA+TGG - chr2.2:13904082-13904101 MS.gene69839:CDS 20.0%
!!! CAATAAAAAGTTTCTCATTT+TGG + chr2.2:13904631-13904650 None:intergenic 20.0%
!!! TACAACTTTAAAGGAAAAAT+GGG - chr2.2:13904083-13904102 MS.gene69839:CDS 20.0%
!!! TTTTCCTTTAAAGTTGTATT+TGG + chr2.2:13904081-13904100 None:intergenic 20.0%
! AATATACAAAGACAAAACCA+AGG - chr2.2:13903775-13903794 MS.gene69839:CDS 25.0%
! AGTTAATAAGATTTGGATGA+AGG + chr2.2:13903495-13903514 None:intergenic 25.0%
! GGGAAAAAGTTAATAAGATT+TGG + chr2.2:13903502-13903521 None:intergenic 25.0%
!! ACAAATTGAACTTCTTTTGA+AGG - chr2.2:13903630-13903649 MS.gene69839:CDS 25.0%
!! TGTATATTTTCAAAGTAAGC+TGG + chr2.2:13903763-13903782 None:intergenic 25.0%
!!! AACTTGTTGAGTGTATTTTT+AGG + chr2.2:13903460-13903479 None:intergenic 25.0%
AAAGGAAAAGGGATTGTTTA+TGG - chr2.2:13904306-13904325 MS.gene69839:CDS 30.0%
AAAGGTTGTAGAGAAATTGA+TGG - chr2.2:13903982-13904001 MS.gene69839:CDS 30.0%
AAGGTTGTAGAGAAATTGAT+GGG - chr2.2:13903983-13904002 MS.gene69839:CDS 30.0%
AGAAACTGATTATGCTGTAA+TGG + chr2.2:13904171-13904190 None:intergenic 30.0%
ATAAGAGGGAACAAAGAAAA+TGG + chr2.2:13903583-13903602 None:intergenic 30.0%
ATGGATGATAAGAATGAAGT+TGG - chr2.2:13904582-13904601 MS.gene69839:CDS 30.0%
GACTATCTTCAAACTGTTTA+TGG - chr2.2:13904015-13904034 MS.gene69839:CDS 30.0%
TCAAAGTAAGCTGGTAATAT+TGG + chr2.2:13903754-13903773 None:intergenic 30.0%
TCAATCAACTCAAATCCAAT+AGG + chr2.2:13904252-13904271 None:intergenic 30.0%
TCCAACAAATTAGCAATAAG+AGG - chr2.2:13903412-13903431 MS.gene69839:CDS 30.0%
TCTTGCATTCATGATATGAT+CGG + chr2.2:13904463-13904482 None:intergenic 30.0%
TTATGAAACATCCAACAGAA+GGG + chr2.2:13904365-13904384 None:intergenic 30.0%
TTGTTTATCTGTTTGATCCA+TGG + chr2.2:13903614-13903633 None:intergenic 30.0%
! ACCTCTTATTGCTAATTTGT+TGG + chr2.2:13903416-13903435 None:intergenic 30.0%
!! TCCTTTAAAGTTGTATTTGG+TGG + chr2.2:13904078-13904097 None:intergenic 30.0%
AACTTGATGCATGAATCATC+AGG + chr2.2:13903847-13903866 None:intergenic 35.0%
AAGGGATTGTTTATGGAAGT+TGG - chr2.2:13904313-13904332 MS.gene69839:CDS 35.0%
ACTTGATGCATGAATCATCA+GGG + chr2.2:13903846-13903865 None:intergenic 35.0%
AGTGAAAGGGTTAAAGGAAA+AGG - chr2.2:13904294-13904313 MS.gene69839:CDS 35.0%
AGTGATGAGTTCAAAGTTCA+AGG - chr2.2:13904482-13904501 MS.gene69839:CDS 35.0%
ATCAACTCAAATCCAATAGG+TGG + chr2.2:13904249-13904268 None:intergenic 35.0%
ATCACAGTTCCTCATGTTAA+TGG - chr2.2:13903523-13903542 MS.gene69839:CDS 35.0%
ATGAGTTCAAAGTTCAAGGT+TGG - chr2.2:13904486-13904505 MS.gene69839:CDS 35.0%
ATTGAAGATGCTTTACCTGA+AGG - chr2.2:13904267-13904286 MS.gene69839:CDS 35.0%
CAAAGCTGTGAAAATTGTGA+TGG - chr2.2:13904563-13904582 MS.gene69839:CDS 35.0%
CCAAACTTGACTCAAAAACT+TGG - chr2.2:13903697-13903716 MS.gene69839:CDS 35.0%
CTTCAGTTAAATCTCTACCT+TGG + chr2.2:13903795-13903814 None:intergenic 35.0%
CTTCTATTATACGATCGCAT+TGG - chr2.2:13903925-13903944 MS.gene69839:CDS 35.0%
GCCACCAAATACAACTTTAA+AGG - chr2.2:13904074-13904093 MS.gene69839:CDS 35.0%
GTGAAAGGGTTAAAGGAAAA+GGG - chr2.2:13904295-13904314 MS.gene69839:CDS 35.0%
GTTATGAAACATCCAACAGA+AGG + chr2.2:13904366-13904385 None:intergenic 35.0%
TAACATGAGGAACTGTGATA+GGG + chr2.2:13903522-13903541 None:intergenic 35.0%
TCAGTAAGCAAACTAGAGTT+TGG - chr2.2:13903895-13903914 MS.gene69839:CDS 35.0%
TCTGTGGTTTATTGTGCATA+TGG - chr2.2:13904135-13904154 MS.gene69839:CDS 35.0%
TGTCTCCAATACATGATACT+CGG - chr2.2:13903727-13903746 MS.gene69839:CDS 35.0%
TTAACATGAGGAACTGTGAT+AGG + chr2.2:13903523-13903542 None:intergenic 35.0%
TTATACGATCGCATTGGAAT+AGG - chr2.2:13903931-13903950 MS.gene69839:CDS 35.0%
TTGAAGATGCTTTACCTGAA+GGG - chr2.2:13904268-13904287 MS.gene69839:CDS 35.0%
TTGAGAAAGGTGATGAAGAT+GGG - chr2.2:13904517-13904536 MS.gene69839:CDS 35.0%
!! AATGTTTCCATGGTTTGCTA+TGG - chr2.2:13903363-13903382 MS.gene69839:CDS 35.0%
!! ATGTTTCCATGGTTTGCTAT+GGG - chr2.2:13903364-13903383 MS.gene69839:CDS 35.0%
!! TAAAGGAAAAATGGGTTGCA+TGG - chr2.2:13904091-13904110 MS.gene69839:CDS 35.0%
!! TTGCTAATTTGTTGGAGAGA+CGG + chr2.2:13903408-13903427 None:intergenic 35.0%
!! TTGCTTGGTCTTGAATTAAC+AGG - chr2.2:13904198-13904217 MS.gene69839:CDS 35.0%
!!! ATTTTAGAACACCCTTCTGT+TGG - chr2.2:13904351-13904370 MS.gene69839:CDS 35.0%
!!! CCAAGTTTTTGAGTCAAGTT+TGG + chr2.2:13903700-13903719 None:intergenic 35.0%
ACCTGAAGGGTTTAGTGAAA+GGG - chr2.2:13904281-13904300 MS.gene69839:CDS 40.0%
ATTGCTATGTGCAAAGGAGA+AGG + chr2.2:13903346-13903365 None:intergenic 40.0%
CTCACAGAAACTATCAAGAC+AGG + chr2.2:13904673-13904692 None:intergenic 40.0%
GGAAACATTGCTATGTGCAA+AGG + chr2.2:13903352-13903371 None:intergenic 40.0%
GGATGTTTCATAACACACTG+TGG - chr2.2:13904372-13904391 MS.gene69839:CDS 40.0%
GGGTTTAGTGAAAGGGTTAA+AGG - chr2.2:13904288-13904307 MS.gene69839:CDS 40.0%
GTTGAGAAAGGTGATGAAGA+TGG - chr2.2:13904516-13904535 MS.gene69839:CDS 40.0%
TACCTGAAGGGTTTAGTGAA+AGG - chr2.2:13904280-13904299 MS.gene69839:CDS 40.0%
TGCACATAGCAATGTTTCCA+TGG - chr2.2:13903353-13903372 MS.gene69839:CDS 40.0%
TGGCTTAAGGGATTCAAACA+TGG - chr2.2:13904111-13904130 MS.gene69839:CDS 40.0%
TTGGACCGAGTATCATGTAT+TGG + chr2.2:13903735-13903754 None:intergenic 40.0%
TTGTTTCAGCATCAAGAGGA+AGG + chr2.2:13903549-13903568 None:intergenic 40.0%
! AAAGTTGTATTTGGTGGCTC+AGG + chr2.2:13904072-13904091 None:intergenic 40.0%
! ACTTGTTAACACGTCTCAGT+TGG - chr2.2:13904416-13904435 MS.gene69839:CDS 40.0%
! GAAGTTGTTTCAGCATCAAG+AGG + chr2.2:13903553-13903572 None:intergenic 40.0%
! TCAGATGCAGTTGCTTTCAA+AGG - chr2.2:13903964-13903983 MS.gene69839:CDS 40.0%
!! AAAATGGGTTGCATGGCTTA+AGG - chr2.2:13904098-13904117 MS.gene69839:CDS 40.0%
!! AAATGGGTTGCATGGCTTAA+GGG - chr2.2:13904099-13904118 MS.gene69839:CDS 40.0%
!! CTAGTTTGCTTACTGAAGCT+AGG + chr2.2:13903891-13903910 None:intergenic 40.0%
!! TTCAAAGTTCAAGGTTGGTG+TGG - chr2.2:13904491-13904510 MS.gene69839:CDS 40.0%
AAGTGTCCCATAGCAAACCA+TGG + chr2.2:13903373-13903392 None:intergenic 45.0%
ACCCTTTCACTAAACCCTTC+AGG + chr2.2:13904285-13904304 None:intergenic 45.0%
AGAGGAAGGCCATTAACATG+AGG + chr2.2:13903535-13903554 None:intergenic 45.0%
AGCAAACTAGAGTTTGGCAG+TGG - chr2.2:13903901-13903920 MS.gene69839:CDS 45.0%
ATATGATCGGAACCAAGACG+TGG + chr2.2:13904450-13904469 None:intergenic 45.0%
CCATGGCTGTAGCAATAAGA+GGG + chr2.2:13903597-13903616 None:intergenic 45.0%
GAATCATCAGGGAACTCTGA+AGG + chr2.2:13903835-13903854 None:intergenic 45.0%
GGAAAACCTGTTCTGCTTTC+AGG - chr2.2:13904036-13904055 MS.gene69839:CDS 45.0%
GGAGCTGCTTCTATAACTGA+GGG - chr2.2:13904393-13904412 MS.gene69839:CDS 45.0%
GTTGGTGTGGAAGTTGAGAA+AGG - chr2.2:13904504-13904523 MS.gene69839:CDS 45.0%
TCCATGGCTGTAGCAATAAG+AGG + chr2.2:13903598-13903617 None:intergenic 45.0%
TGGAGCTGCTTCTATAACTG+AGG - chr2.2:13904392-13904411 MS.gene69839:CDS 45.0%
TTGTTGGAGAGACGGAGAAA+TGG + chr2.2:13903400-13903419 None:intergenic 45.0%
! GGCTTAAGTGCTGCAAGAAA+TGG + chr2.2:13904228-13904247 None:intergenic 45.0%
! GGGATTCAAACATGGTTCTG+TGG - chr2.2:13904119-13904138 MS.gene69839:CDS 45.0%
! TTTGGTGGCTCAGGTAAAAG+AGG + chr2.2:13904063-13904082 None:intergenic 45.0%
!! CAGTTTCTAGAGCTGTTGCT+TGG - chr2.2:13904183-13904202 MS.gene69839:CDS 45.0%
AGAGGACCTGAAAGCAGAAC+AGG + chr2.2:13904045-13904064 None:intergenic 50.0%
CCCTCTTATTGCTACAGCCA+TGG - chr2.2:13903594-13903613 MS.gene69839:CDS 50.0%
GCAGCACTTAAGCCACCTAT+TGG - chr2.2:13904234-13904253 MS.gene69839:CDS 50.0%
!! TTGGTGCTATTGCCACGTCT+TGG - chr2.2:13904435-13904454 MS.gene69839:CDS 50.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 13903334 13904713 13903334 ID=MS.gene69839
chr2.2 mRNA 13903334 13904713 13903334 ID=MS.gene69839.t1;Parent=MS.gene69839
chr2.2 exon 13903334 13904713 13903334 ID=MS.gene69839.t1.exon1;Parent=MS.gene69839.t1
chr2.2 CDS 13903334 13904713 13903334 ID=cds.MS.gene69839.t1;Parent=MS.gene69839.t1
Gene Sequence

>MS.gene69839

ATGGATGCTCCTTCTCCTTTGCACATAGCAATGTTTCCATGGTTTGCTATGGGACACTTAACTCCATTTCTCCGTCTCTCCAACAAATTAGCAATAAGAGGTCACAAAATCTCATTCTTCATACCTAAAAATACACTCAACAAGTTACAACATCTAAACCTTCATCCAAATCTTATTAACTTTTTCCCTATCACAGTTCCTCATGTTAATGGCCTTCCTCTTGATGCTGAAACAACTTCAGATGTGCCATTTTCTTTGTTCCCTCTTATTGCTACAGCCATGGATCAAACAGATAAACAAATTGAACTTCTTTTGAAGGAGTTAAAGCCACAAATAGTTTTCTTTGATTTTCAATATTGGCTACCAAACTTGACTCAAAAACTTGGCATCAAATGTCTCCAATACATGATACTCGGTCCAATATTACCAGCTTACTTTGAAAATATACAAAGACAAAACCAAGGTAGAGATTTAACTGAAGTTGATCTCAAGAAACATCCTTCAGAGTTCCCTGATGATTCATGCATCAAGTTTCATTCTCACGAACTTCGATTCCTAGCTTCAGTAAGCAAACTAGAGTTTGGCAGTGGTCTTCTATTATACGATCGCATTGGAATAGGAACAAACTTGTCAGATGCAGTTGCTTTCAAAGGTTGTAGAGAAATTGATGGGATATATGCTGACTATCTTCAAACTGTTTATGGAAAACCTGTTCTGCTTTCAGGTCCTCTTTTACCTGAGCCACCAAATACAACTTTAAAGGAAAAATGGGTTGCATGGCTTAAGGGATTCAAACATGGTTCTGTGGTTTATTGTGCATATGGAAGTGAAAGTCCATTACAGCATAATCAGTTTCTAGAGCTGTTGCTTGGTCTTGAATTAACAGGTTTTCCATTTCTTGCAGCACTTAAGCCACCTATTGGATTTGAGTTGATTGAAGATGCTTTACCTGAAGGGTTTAGTGAAAGGGTTAAAGGAAAAGGGATTGTTTATGGAAGTTGGATTCAACAACAATTGATTTTAGAACACCCTTCTGTTGGATGTTTCATAACACACTGTGGAGCTGCTTCTATAACTGAGGGACTTGTTAACACGTCTCAGTTGGTGCTATTGCCACGTCTTGGTTCCGATCATATCATGAATGCAAGAGTGATGAGTTCAAAGTTCAAGGTTGGTGTGGAAGTTGAGAAAGGTGATGAAGATGGGTTGTTTACAAAAGAAAGTGTGTGCAAAGCTGTGAAAATTGTGATGGATGATAAGAATGAAGTTGGAAAAGAAGTAAGAGATAATCATGCCAAAATGAGAAACTTTTTATTGAGCAGCAACTTAGAATCTTCCTGTCTTGATAGTTTCTGTGAGAAACTCTATGATTTGCTCTAG

Protein sequence

>MS.gene69839.t1

MDAPSPLHIAMFPWFAMGHLTPFLRLSNKLAIRGHKISFFIPKNTLNKLQHLNLHPNLINFFPITVPHVNGLPLDAETTSDVPFSLFPLIATAMDQTDKQIELLLKELKPQIVFFDFQYWLPNLTQKLGIKCLQYMILGPILPAYFENIQRQNQGRDLTEVDLKKHPSEFPDDSCIKFHSHELRFLASVSKLEFGSGLLLYDRIGIGTNLSDAVAFKGCREIDGIYADYLQTVYGKPVLLSGPLLPEPPNTTLKEKWVAWLKGFKHGSVVYCAYGSESPLQHNQFLELLLGLELTGFPFLAALKPPIGFELIEDALPEGFSERVKGKGIVYGSWIQQQLILEHPSVGCFITHCGAASITEGLVNTSQLVLLPRLGSDHIMNARVMSSKFKVGVEVEKGDEDGLFTKESVCKAVKIVMDDKNEVGKEVRDNHAKMRNFLLSSNLESSCLDSFCEKLYDLL