AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene065245


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene065245.t1 MTR_2g083430 95.415 458 21 0 1 458 1 458 0.0 877
MS.gene065245.t1 MTR_2g083480 77.462 457 103 0 1 457 1 457 0.0 716
MS.gene065245.t1 MTR_2g083390 72.707 458 101 1 1 458 1 434 0.0 686
MS.gene065245.t1 MTR_2g083420 73.144 458 99 1 1 458 1 434 0.0 686
MS.gene065245.t1 MTR_2g083380 68.341 458 145 0 1 458 18 475 0.0 634
MS.gene065245.t1 MTR_2g083490 68.122 458 146 0 1 458 1 458 0.0 632
MS.gene065245.t1 MTR_4g079250 59.130 460 184 3 1 458 1 458 0.0 566
MS.gene065245.t1 MTR_4g079270 58.261 460 188 3 1 458 1 458 0.0 557
MS.gene065245.t1 MTR_2g014900 55.876 451 198 1 8 458 7 456 0.0 524
MS.gene065245.t1 MTR_2g083360 58.057 453 85 5 6 458 27 374 7.29e-168 477
MS.gene065245.t1 MTR_2g086283 52.796 447 99 6 11 457 1 335 7.28e-148 425
MS.gene065245.t1 MTR_1g090270 41.126 462 250 12 7 457 14 464 8.05e-110 332
MS.gene065245.t1 MTR_4g059370 39.886 351 190 9 118 457 51 391 4.87e-80 253
MS.gene065245.t1 MTR_8g068330 32.692 468 285 16 7 456 7 462 4.30e-69 227
MS.gene065245.t1 MTR_4g123553 33.192 473 274 17 2 455 9 458 2.35e-67 223
MS.gene065245.t1 MTR_2g008226 34.388 474 275 19 6 456 8 468 2.20e-65 218
MS.gene065245.t1 MTR_8g068360 32.981 473 280 16 7 458 11 467 1.47e-64 215
MS.gene065245.t1 MTR_7g067330 33.115 459 257 15 7 455 8 426 2.77e-63 211
MS.gene065245.t1 MTR_7g067120 33.042 457 260 14 7 455 8 426 2.86e-62 208
MS.gene065245.t1 MTR_2g008225 31.602 462 291 13 6 454 13 462 1.08e-61 208
MS.gene065245.t1 MTR_2g008220 31.965 463 288 15 6 454 12 461 2.07e-61 207
MS.gene065245.t1 MTR_8g068340 31.049 467 292 15 7 455 11 465 5.49e-60 203
MS.gene065245.t1 MTR_2g014930 42.268 291 86 7 17 306 9 218 8.50e-60 196
MS.gene065245.t1 MTR_6g036650 30.672 476 281 16 6 455 16 468 5.81e-58 198
MS.gene065245.t1 MTR_6g042310 32.035 462 284 15 7 455 17 461 1.21e-57 197
MS.gene065245.t1 MTR_2g046620 30.769 468 292 16 2 455 10 459 4.26e-54 187
MS.gene065245.t1 MTR_2g083440 82.353 102 18 0 357 458 11 112 5.41e-54 176
MS.gene065245.t1 MTR_4g079280 40.789 228 90 2 11 238 1 183 1.11e-52 175
MS.gene065245.t1 MTR_8g007650 31.222 442 280 11 7 432 6 439 1.58e-49 176
MS.gene065245.t1 MTR_8g007565 30.995 442 281 11 7 432 6 439 1.96e-49 175
MS.gene065245.t1 MTR_3g435310 29.890 455 261 16 6 455 16 417 7.64e-49 172
MS.gene065245.t1 MTR_1g090280 42.308 208 108 5 261 457 108 314 7.06e-47 164
MS.gene065245.t1 MTR_5g066410 30.474 443 259 13 11 432 1 415 5.44e-45 163
MS.gene065245.t1 MTR_4g077960 29.095 464 275 19 17 455 1 435 1.97e-43 159
MS.gene065245.t1 MTR_8g009055 28.145 469 267 16 7 435 5 443 3.42e-34 134
MS.gene065245.t1 MTR_8g071070 28.216 482 297 16 8 457 7 471 4.61e-34 133
MS.gene065245.t1 MTR_8g066610 26.141 482 318 15 6 457 7 480 9.36e-33 130
MS.gene065245.t1 MTR_8g009050 27.447 470 269 16 7 435 5 443 9.73e-33 129
MS.gene065245.t1 MTR_4g031800 26.176 489 294 16 6 454 7 468 8.43e-32 127
MS.gene065245.t1 MTR_5g087620 25.673 483 294 17 8 443 10 474 1.53e-31 126
MS.gene065245.t1 MTR_7g117170 27.669 459 290 16 3 435 10 452 1.63e-31 126
MS.gene065245.t1 MTR_7g070660 25.503 447 288 15 7 421 10 443 5.39e-31 125
MS.gene065245.t1 MTR_6g023665 26.622 447 292 11 9 433 14 446 7.82e-31 124
MS.gene065245.t1 MTR_8g027870 29.167 480 282 20 4 452 15 467 8.64e-31 124
MS.gene065245.t1 MTR_8g027885 26.411 496 275 18 4 452 15 467 9.90e-31 124
MS.gene065245.t1 MTR_8g008990 27.601 471 269 17 7 435 5 445 2.62e-30 122
MS.gene065245.t1 MTR_6g488280 25.901 444 299 10 9 433 7 439 1.51e-29 120
MS.gene065245.t1 MTR_0428s0010 25.901 444 299 10 9 433 7 439 1.51e-29 120
MS.gene065245.t1 MTR_8g009063 26.752 471 270 16 7 436 12 448 1.88e-29 120
MS.gene065245.t1 MTR_6g033615 27.703 444 269 17 9 428 5 420 2.39e-29 120
MS.gene065245.t1 MTR_7g013220 25.342 438 291 14 8 427 5 424 7.19e-29 118
MS.gene065245.t1 MTR_0078s0060 25.268 467 283 15 7 436 5 442 1.73e-28 117
MS.gene065245.t1 MTR_0009s0240 24.301 465 327 14 8 457 7 461 2.53e-28 117
MS.gene065245.t1 MTR_4g117980 25.793 473 281 17 6 433 9 456 4.06e-28 117
MS.gene065245.t1 MTR_6g033625 26.327 452 279 17 9 428 5 434 6.30e-28 115
MS.gene065245.t1 MTR_8g009073 27.887 459 279 18 7 435 5 441 1.44e-27 115
MS.gene065245.t1 MTR_7g070740 24.576 472 288 14 7 433 10 458 2.24e-27 114
MS.gene065245.t1 MTR_8g006730 23.991 446 309 11 8 433 6 441 3.53e-27 114
MS.gene065245.t1 MTR_8g465670 25.111 450 302 12 9 434 8 446 4.59e-27 113
MS.gene065245.t1 MTR_7g013200 25.571 438 279 16 8 427 5 413 5.07e-27 113
MS.gene065245.t1 MTR_4g024020 26.195 481 285 18 5 436 6 465 8.59e-27 113
MS.gene065245.t1 MTR_0184s0030 31.298 262 144 7 196 425 180 437 1.11e-26 112
MS.gene065245.t1 MTR_0184s0040 25.160 469 282 16 7 436 20 458 1.24e-26 112
MS.gene065245.t1 MTR_0078s0190 25.160 469 282 16 7 436 20 458 1.24e-26 112
MS.gene065245.t1 MTR_7g070610 24.733 469 292 16 7 433 12 461 2.46e-26 111
MS.gene065245.t1 MTR_7g013180 26.498 434 272 16 8 419 5 413 2.47e-26 111
MS.gene065245.t1 MTR_4g485590 27.384 409 239 14 8 394 9 381 2.72e-26 110
MS.gene065245.t1 MTR_7g102560 26.170 470 289 15 5 433 6 458 3.61e-26 111
MS.gene065245.t1 MTR_7g046490 32.993 294 156 11 157 434 171 439 4.80e-26 110
MS.gene065245.t1 MTR_8g012635 34.272 213 119 5 236 434 242 447 5.27e-26 110
MS.gene065245.t1 MTR_6g033725 27.640 445 281 16 9 429 5 432 7.52e-26 110
MS.gene065245.t1 MTR_0536s0010 26.797 459 285 15 6 436 19 454 1.01e-25 109
MS.gene065245.t1 MTR_2g098430 23.362 458 310 12 9 437 7 452 1.02e-25 109
MS.gene065245.t1 MTR_8g006220 25.641 468 285 13 9 434 7 453 1.05e-25 109
MS.gene065245.t1 MTR_7g047030 24.946 461 289 14 8 435 6 442 1.11e-25 109
MS.gene065245.t1 MTR_7g047270 24.946 461 289 14 8 435 6 442 1.11e-25 109
MS.gene065245.t1 MTR_7g055710 24.473 474 286 16 7 433 10 458 1.21e-25 109
MS.gene065245.t1 MTR_0078s0010 25.771 454 294 14 8 435 6 442 1.46e-25 109
MS.gene065245.t1 MTR_6g005600 35.025 197 108 4 253 436 253 442 1.61e-25 108
MS.gene065245.t1 MTR_8g012730 33.484 221 128 5 228 434 69 284 1.61e-25 106
MS.gene065245.t1 MTR_1g062380 25.435 460 300 17 4 427 12 464 1.67e-25 109
MS.gene065245.t1 MTR_5g045970 26.681 476 292 19 3 435 11 472 1.73e-25 109
MS.gene065245.t1 MTR_7g071040 24.249 433 291 12 7 413 16 437 2.37e-25 108
MS.gene065245.t1 MTR_6g038200 26.932 453 262 20 8 429 11 425 2.52e-25 108
MS.gene065245.t1 MTR_7g070800 24.565 460 300 13 7 433 5 450 3.08e-25 108
MS.gene065245.t1 MTR_8g083280 25.615 488 288 17 9 448 8 468 3.75e-25 108
MS.gene065245.t1 MTR_5g035560 26.049 453 279 16 7 436 10 429 3.83e-25 108
MS.gene065245.t1 MTR_3g009510 34.286 210 119 5 236 429 241 447 4.05e-25 108
MS.gene065245.t1 MTR_1g019520 34.392 189 109 4 258 435 5 189 4.28e-25 103
MS.gene065245.t1 MTR_2g034990 25.778 450 289 17 6 422 9 446 4.40e-25 108
MS.gene065245.t1 MTR_8g009073 33.971 209 119 6 241 435 109 312 5.57e-25 105
MS.gene065245.t1 MTR_8g009067 27.412 456 285 16 7 435 5 441 9.25e-25 107
MS.gene065245.t1 MTR_8g009067 34.574 188 109 4 258 435 140 323 1.24e-24 104
MS.gene065245.t1 MTR_8g006710 23.266 447 308 12 9 433 7 440 1.27e-24 106
MS.gene065245.t1 MTR_5g035580 26.439 469 281 17 7 448 12 443 1.34e-24 106
MS.gene065245.t1 MTR_7g071050 25.556 450 265 17 7 433 12 414 1.63e-24 105
MS.gene065245.t1 MTR_8g006270 24.566 403 249 11 53 427 61 436 1.84e-24 105
MS.gene065245.t1 MTR_7g102460 26.360 478 285 20 5 436 6 462 1.92e-24 106
MS.gene065245.t1 MTR_6g038220 26.923 468 274 20 8 448 11 437 2.03e-24 105
MS.gene065245.t1 MTR_2g046820 36.842 209 117 6 259 457 259 462 2.17e-24 105
MS.gene065245.t1 MTR_7g070810 25.778 450 298 13 7 428 8 449 2.27e-24 105
MS.gene065245.t1 MTR_8g006260 32.877 219 129 9 231 436 234 447 2.41e-24 105
MS.gene065245.t1 MTR_4g485620 24.385 447 293 13 20 436 1 432 2.71e-24 105
MS.gene065245.t1 MTR_6g038230 26.695 472 271 20 8 448 11 438 3.71e-24 105
MS.gene065245.t1 MTR_4g117950 26.247 461 284 16 6 435 4 439 3.84e-24 105
MS.gene065245.t1 MTR_1g107350 23.913 460 310 14 1 435 1 445 6.13e-24 104
MS.gene065245.t1 MTR_4g128720 26.577 444 292 15 7 438 14 435 6.40e-24 104
MS.gene065245.t1 MTR_8g012650 32.394 213 123 5 236 434 242 447 6.53e-24 104
MS.gene065245.t1 MTR_1g019510 26.039 457 289 15 7 435 5 440 7.26e-24 104
MS.gene065245.t1 MTR_5g029800 24.512 461 299 17 6 428 9 458 9.38e-24 103
MS.gene065245.t1 MTR_6g035185 23.696 460 308 14 6 433 9 457 1.47e-23 103
MS.gene065245.t1 MTR_7g102490 26.452 465 297 19 5 433 6 461 2.43e-23 102
MS.gene065245.t1 MTR_2g040530 34.737 190 112 4 259 438 261 448 2.45e-23 102
MS.gene065245.t1 MTR_7g070910 23.312 459 311 14 7 433 10 459 3.78e-23 102
MS.gene065245.t1 MTR_8g012630 33.684 190 108 4 259 434 206 391 4.02e-23 101
MS.gene065245.t1 MTR_8g466240 26.588 425 259 18 1 398 1 399 4.20e-23 102
MS.gene065245.t1 MTR_7g070940 23.226 465 294 15 7 433 8 447 4.78e-23 102
MS.gene065245.t1 MTR_6g035265 24.416 471 282 16 6 433 9 448 4.83e-23 102
MS.gene065245.t1 MTR_2g035020 24.944 449 294 16 6 422 9 446 6.09e-23 101
MS.gene065245.t1 MTR_6g038240 34.503 171 101 6 259 429 266 425 7.11e-23 101
MS.gene065245.t1 MTR_2g046750 34.733 262 137 11 219 457 215 465 8.85e-23 100
MS.gene065245.t1 MTR_7g070780 24.059 478 285 15 6 433 9 458 9.41e-23 101
MS.gene065245.t1 MTR_7g070930 23.261 460 310 14 7 433 13 462 1.43e-22 100
MS.gene065245.t1 MTR_8g077590 31.535 241 146 6 208 434 207 442 1.76e-22 100
MS.gene065245.t1 MTR_4g117960 23.707 464 301 16 6 433 9 455 2.26e-22 100
MS.gene065245.t1 MTR_8g074550 24.385 488 281 19 6 434 6 464 3.20e-22 99.8
MS.gene065245.t1 MTR_6g033660 27.045 440 290 15 9 428 5 433 3.71e-22 99.4
MS.gene065245.t1 MTR_5g098930 22.133 497 305 14 7 454 4 467 4.13e-22 99.0
MS.gene065245.t1 MTR_3g049970 25.053 471 292 16 1 435 1 446 6.42e-22 98.6
MS.gene065245.t1 MTR_8g088560 24.033 491 290 20 7 455 9 458 9.73e-22 97.8
MS.gene065245.t1 MTR_2g059240 23.503 451 299 12 5 429 10 440 1.21e-21 97.4
MS.gene065245.t1 MTR_5g019580 33.028 218 125 6 229 427 258 473 1.24e-21 97.8
MS.gene065245.t1 MTR_5g019580 33.028 218 125 6 229 427 234 449 1.27e-21 97.8
MS.gene065245.t1 MTR_7g117405 24.729 461 301 16 8 436 12 458 1.44e-21 97.4
MS.gene065245.t1 MTR_7g013260 25.056 443 273 19 1 420 1 407 1.59e-21 97.1
MS.gene065245.t1 MTR_0536s0020 25.268 467 293 15 2 436 12 454 2.97e-21 96.7
MS.gene065245.t1 MTR_7g102550 25.490 459 293 18 8 429 9 455 3.15e-21 96.7
MS.gene065245.t1 MTR_4g082810 27.139 409 248 13 7 384 6 395 5.22e-21 95.1
MS.gene065245.t1 MTR_5g090610 29.845 258 153 9 206 438 190 444 5.43e-21 95.5
MS.gene065245.t1 MTR_8g083290 25.054 463 278 19 6 429 2 434 5.65e-21 95.5
MS.gene065245.t1 MTR_4g082820 25.941 478 289 15 7 434 6 468 5.68e-21 95.5
MS.gene065245.t1 MTR_8g008970 25.482 467 280 16 7 435 5 441 7.22e-21 96.3
MS.gene065245.t1 MTR_8g008970 29.151 271 160 9 169 436 522 763 1.89e-17 85.5
MS.gene065245.t1 MTR_6g033675 23.543 446 299 12 9 428 5 434 7.59e-21 95.1
MS.gene065245.t1 MTR_3g479520 23.222 478 315 13 8 450 15 475 7.61e-21 95.5
MS.gene065245.t1 MTR_5g090630 30.137 219 130 6 241 438 233 449 9.33e-21 95.1
MS.gene065245.t1 MTR_5g090620 27.481 262 156 7 206 438 203 459 1.40e-20 94.4
MS.gene065245.t1 MTR_4g094920 28.571 231 146 9 236 454 256 479 1.42e-20 94.7
MS.gene065245.t1 MTR_4g485630 33.333 186 110 5 259 436 269 448 1.83e-20 94.0
MS.gene065245.t1 MTR_5g045960 25.367 477 281 18 7 433 8 459 2.24e-20 94.0
MS.gene065245.t1 MTR_7g070860 23.144 458 295 12 7 433 6 437 2.38e-20 94.0
MS.gene065245.t1 MTR_5g090660 29.646 226 136 6 234 438 233 456 2.43e-20 94.4
MS.gene065245.t1 MTR_5g090700 28.846 260 153 8 206 438 206 460 4.06e-20 93.2
MS.gene065245.t1 MTR_3g009490 35.802 162 86 4 282 429 2 159 5.35e-20 88.2
MS.gene065245.t1 MTR_5g067170 32.632 190 112 5 258 433 267 454 5.51e-20 92.8
MS.gene065245.t1 MTR_3g084540 25.000 480 300 20 8 449 6 463 7.18e-20 92.4
MS.gene065245.t1 MTR_4g128690 25.814 430 274 15 7 419 14 415 7.78e-20 92.0
MS.gene065245.t1 MTR_3g084530 25.000 460 285 19 8 429 6 443 8.57e-20 92.0
MS.gene065245.t1 MTR_5g090670 27.444 266 159 7 202 438 200 460 1.18e-19 91.7
MS.gene065245.t1 MTR_5g098960 37.079 178 93 8 253 426 256 418 1.22e-19 91.7
MS.gene065245.t1 MTR_4g095008 23.696 460 294 20 7 436 10 442 1.35e-19 91.7
MS.gene065245.t1 MTR_2g035040 32.402 179 106 4 258 422 174 351 1.39e-19 90.9
MS.gene065245.t1 MTR_8g012745 32.979 188 109 5 259 434 262 444 1.60e-19 91.3
MS.gene065245.t1 MTR_7g013240 32.716 162 102 5 259 420 252 406 2.86e-19 90.1
MS.gene065245.t1 MTR_3g084520 24.034 466 282 18 8 429 6 443 2.91e-19 90.5
MS.gene065245.t1 MTR_4g117890 25.265 471 288 19 2 436 7 449 3.07e-19 90.5
MS.gene065245.t1 MTR_8g064880 25.885 452 271 19 6 416 7 435 3.13e-19 90.5
MS.gene065245.t1 MTR_4g485640 23.611 432 295 13 18 428 219 636 5.66e-19 90.1
MS.gene065245.t1 MTR_3g069690 32.222 180 111 6 258 435 256 426 7.16e-19 89.4
MS.gene065245.t1 MTR_3g069710 24.062 453 281 17 9 435 13 428 7.50e-19 89.0
MS.gene065245.t1 MTR_4g118000 24.947 469 286 19 1 432 1 440 8.41e-19 89.0
MS.gene065245.t1 MTR_1g107315 36.420 162 99 4 253 412 265 424 1.14e-18 88.6
MS.gene065245.t1 MTR_5g090580 27.308 260 157 7 206 438 204 458 1.17e-18 88.6
MS.gene065245.t1 MTR_6g011340 24.784 464 296 17 8 435 10 456 1.18e-18 88.6
MS.gene065245.t1 MTR_8g032950 23.932 468 308 18 1 435 5 457 1.41e-18 88.6
MS.gene065245.t1 MTR_8g064870 22.727 462 305 12 6 435 9 450 2.21e-18 87.8
MS.gene065245.t1 MTR_8g044140 23.023 430 254 14 46 428 19 418 2.47e-18 87.4
MS.gene065245.t1 MTR_6g038300 30.994 171 108 5 259 429 266 426 3.25e-18 87.0
MS.gene065245.t1 MTR_1g107360 30.288 208 133 5 229 435 242 438 3.39e-18 87.0
MS.gene065245.t1 MTR_7g080935 23.608 449 292 14 7 434 10 428 4.44e-18 86.7
MS.gene065245.t1 MTR_7g012120 31.461 178 107 4 259 422 272 448 6.23e-18 86.7
MS.gene065245.t1 MTR_7g102450 33.333 186 108 5 264 436 267 449 7.99e-18 86.3
MS.gene065245.t1 MTR_7g080950 31.818 176 109 6 259 434 259 423 8.31e-18 85.9
MS.gene065245.t1 MTR_5g075440 25.337 371 231 10 93 439 88 436 8.82e-18 85.9
MS.gene065245.t1 MTR_5g027210 25.911 247 150 5 212 426 212 457 9.98e-18 85.9
MS.gene065245.t1 MTR_5g072860 23.414 457 297 17 8 439 18 446 1.05e-17 85.9
MS.gene065245.t1 MTR_1g107375 31.633 196 122 5 240 435 247 430 1.06e-17 85.5
MS.gene065245.t1 MTR_4g008630 25.726 241 164 6 209 437 204 441 1.21e-17 85.5
MS.gene065245.t1 MTR_6g013900 30.601 183 117 5 253 435 283 455 1.98e-17 84.7
MS.gene065245.t1 MTR_6g014270 23.418 474 292 17 8 435 7 455 2.05e-17 84.7
MS.gene065245.t1 MTR_7g080940 30.682 176 111 5 259 434 264 428 2.06e-17 84.7
MS.gene065245.t1 MTR_6g014170 29.897 194 126 5 253 446 266 449 2.62e-17 84.3
MS.gene065245.t1 MTR_8g059425 27.600 250 153 9 199 435 220 454 2.63e-17 84.7
MS.gene065245.t1 MTR_7g470610 27.653 311 174 11 120 409 5 285 3.21e-17 82.4
MS.gene065245.t1 MTR_7g070583 27.653 311 174 11 120 409 5 285 3.21e-17 82.4
MS.gene065245.t1 MTR_8g090095 27.615 239 155 7 215 438 224 459 3.28e-17 84.3
MS.gene065245.t1 MTR_5g070040 31.579 209 122 9 236 428 240 443 4.13e-17 84.0
MS.gene065245.t1 MTR_6g014020 30.601 183 117 5 253 435 284 456 4.98e-17 83.6
MS.gene065245.t1 MTR_6g013990 28.962 183 120 5 253 435 282 454 5.51e-17 83.6
MS.gene065245.t1 MTR_5g058320 23.736 455 303 14 5 435 7 441 5.69e-17 83.6
MS.gene065245.t1 MTR_7g102520 23.983 467 304 18 7 436 11 463 5.99e-17 83.6
MS.gene065245.t1 MTR_3g479610 28.866 194 126 5 259 450 122 305 1.08e-16 81.3
MS.gene065245.t1 MTR_3g031400 23.009 452 279 17 8 434 18 425 1.26e-16 82.4
MS.gene065245.t1 MTR_6g013920 27.686 242 145 9 210 435 228 455 1.67e-16 82.0
MS.gene065245.t1 MTR_3g479490 26.776 183 125 4 253 435 277 450 2.08e-16 81.6
MS.gene065245.t1 MTR_0891s0010 28.249 177 118 4 259 435 99 266 2.27e-16 79.7
MS.gene065245.t1 MTR_7g011470 28.226 248 152 9 203 435 202 438 2.36e-16 81.6
MS.gene065245.t1 MTR_6g014200 28.689 244 149 9 206 435 221 453 2.39e-16 81.6
MS.gene065245.t1 MTR_6g014040 24.946 465 295 16 8 435 10 457 2.55e-16 81.6
MS.gene065245.t1 MTR_7g011470 28.226 248 152 9 203 435 206 442 2.67e-16 81.3
MS.gene065245.t1 MTR_0288s0020 24.945 457 285 18 8 435 10 437 2.79e-16 81.3
MS.gene065245.t1 MTR_6g013450 23.126 467 307 14 5 435 7 457 3.78e-16 80.9
MS.gene065245.t1 MTR_3g031450 23.789 454 275 18 8 434 18 427 4.83e-16 80.5
MS.gene065245.t1 MTR_7g070870 25.061 407 271 14 7 394 18 409 5.84e-16 80.5
MS.gene065245.t1 MTR_6g014220 30.055 183 118 5 253 435 282 454 6.15e-16 80.5
MS.gene065245.t1 MTR_1g032490 33.951 162 103 4 253 412 267 426 7.37e-16 80.1
MS.gene065245.t1 MTR_3g079480 28.824 170 112 4 259 428 298 458 8.47e-16 80.1
MS.gene065245.t1 MTR_2g008210 24.565 460 300 18 8 436 11 454 1.09e-15 79.7
MS.gene065245.t1 MTR_5g004940 28.723 188 121 5 259 434 199 385 1.11e-15 79.0
MS.gene065245.t1 MTR_1g107380 30.508 177 115 6 259 434 279 448 1.16e-15 79.3
MS.gene065245.t1 MTR_5g090600 26.441 295 175 10 172 438 157 437 1.17e-15 79.3
MS.gene065245.t1 MTR_1g107365 31.214 173 108 4 240 412 286 447 1.37e-15 79.3
MS.gene065245.t1 MTR_8g007585 29.508 183 119 5 253 435 196 368 1.53e-15 78.6
MS.gene065245.t1 MTR_6g014190 28.866 194 128 5 253 446 91 274 1.84e-15 77.0
MS.gene065245.t1 MTR_6g014310 27.778 252 146 10 201 435 225 457 2.57e-15 78.6
MS.gene065245.t1 MTR_6g014050 27.419 248 152 9 201 435 225 457 2.76e-15 78.2
MS.gene065245.t1 MTR_4g108250 26.984 189 122 5 258 436 280 462 2.84e-15 78.2
MS.gene065245.t1 MTR_6g014250 28.261 184 122 5 253 436 282 455 3.52e-15 77.8
MS.gene065245.t1 MTR_3g008010 28.415 183 121 5 253 435 282 454 4.56e-15 77.8
MS.gene065245.t1 MTR_5g072840 22.348 443 300 13 8 434 10 424 5.27e-15 77.4
MS.gene065245.t1 MTR_1g107285 30.159 189 119 5 249 435 263 440 9.90e-15 76.6
MS.gene065245.t1 MTR_5g016480 27.119 177 123 5 259 434 275 446 1.17e-14 76.3
MS.gene065245.t1 MTR_1g029540 20.582 447 306 14 13 437 19 438 1.38e-14 75.9
MS.gene065245.t1 MTR_8g056740 25.112 223 149 5 220 430 121 337 3.15e-14 74.7
MS.gene065245.t1 MTR_8g009840 31.875 160 93 3 274 419 333 490 3.33e-14 75.1
MS.gene065245.t1 MTR_4g064987 25.207 484 284 23 8 458 8 446 4.93e-14 74.3
MS.gene065245.t1 MTR_5g464810 24.026 462 299 18 8 436 12 454 7.82e-14 73.9
MS.gene065245.t1 MTR_5g064240 24.026 462 299 18 8 436 12 454 7.82e-14 73.9
MS.gene065245.t1 MTR_6g014240 27.473 182 122 5 253 434 251 422 1.12e-13 73.2
MS.gene065245.t1 MTR_6g014187 22.796 465 304 17 8 435 10 456 1.12e-13 73.2
MS.gene065245.t1 MTR_6g013960 21.915 470 324 14 8 446 10 467 4.52e-13 71.2
MS.gene065245.t1 MTR_4g064987 25.159 473 272 22 18 458 18 440 4.93e-13 71.2
MS.gene065245.t1 MTR_5g040030 27.419 186 120 5 259 433 281 462 5.06e-13 71.2
MS.gene065245.t1 MTR_1g040310 22.175 469 299 18 7 433 14 458 6.38e-13 70.9
MS.gene065245.t1 MTR_7g080900 29.240 171 111 5 259 429 266 426 8.44e-13 70.5
MS.gene065245.t1 MTR_7g039550 28.500 200 121 7 259 447 57 245 1.40e-12 68.2
MS.gene065245.t1 MTR_6g014290 26.230 183 125 5 253 435 282 454 1.95e-12 69.3
MS.gene065245.t1 MTR_2086s0010 27.389 157 105 4 279 435 1 148 2.43e-12 65.9
MS.gene065245.t1 MTR_1996s0010 27.389 157 105 4 279 435 1 148 2.43e-12 65.9
MS.gene065245.t1 MTR_6g014150 28.022 182 121 5 253 434 281 452 4.53e-12 68.2
MS.gene065245.t1 MTR_6g014300 26.752 157 105 5 279 435 296 442 1.00e-11 67.0
MS.gene065245.t1 MTR_5g464760 24.464 466 294 21 8 436 12 456 1.02e-11 67.0
MS.gene065245.t1 MTR_0536s0030 30.370 135 82 4 309 433 194 326 3.89e-11 64.7
MS.gene065245.t1 MTR_5g031860 29.655 145 96 4 252 395 275 414 4.59e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene065245.t1 AT5G54010 45.455 462 233 7 1 458 1 447 2.81e-144 420
MS.gene065245.t1 AT5G53990 46.608 457 219 9 7 458 5 441 5.20e-144 419
MS.gene065245.t1 AT1G64920 45.098 459 227 8 7 458 5 445 3.48e-141 412
MS.gene065245.t1 AT1G64910 45.175 456 227 7 7 458 5 441 2.61e-139 407
MS.gene065245.t1 AT2G22930 44.469 452 234 7 5 455 3 438 1.56e-138 405
MS.gene065245.t1 AT4G09500 44.150 453 234 9 5 455 3 438 1.89e-137 402
MS.gene065245.t1 AT4G27560 42.641 462 246 7 1 458 1 447 3.64e-136 399
MS.gene065245.t1 AT4G27570 42.424 462 247 7 1 458 1 447 4.73e-136 399
MS.gene065245.t1 AT5G54060 44.323 458 246 7 7 458 12 466 7.39e-136 399
MS.gene065245.t1 AT3G29630 42.733 461 244 6 1 458 1 444 2.87e-135 397
MS.gene065245.t1 AT3G29630 42.576 458 223 7 1 458 1 418 1.09e-130 384
MS.gene065245.t1 AT4G09500 42.350 451 220 9 5 455 3 413 1.09e-127 377
MS.gene065245.t1 AT1G50580 42.358 458 242 7 1 455 1 439 1.18e-126 375
MS.gene065245.t1 AT5G65550 30.737 475 291 17 5 458 6 463 1.73e-63 213
MS.gene065245.t1 AT2G22590 32.468 462 289 14 7 454 14 466 3.51e-62 209
MS.gene065245.t1 AT5G49690 31.264 451 279 15 7 443 9 442 1.82e-60 204
MS.gene065245.t1 AT2G22930 39.450 218 118 4 5 222 3 206 7.37e-52 177
MS.gene065245.t1 AT2G22930 37.500 96 56 2 363 455 192 286 4.51e-13 70.1
MS.gene065245.t1 AT5G03490 27.517 447 282 13 6 435 17 438 2.62e-36 139
MS.gene065245.t1 AT2G15490 26.403 481 316 14 7 456 6 479 4.20e-36 139
MS.gene065245.t1 AT2G15490 26.860 484 313 16 7 456 6 482 3.23e-35 137
MS.gene065245.t1 AT1G51210 27.716 451 274 14 2 433 15 432 4.05e-35 135
MS.gene065245.t1 AT2G15480 26.860 484 310 16 7 456 9 482 6.09e-35 136
MS.gene065245.t1 AT2G15480 26.667 495 307 17 7 456 9 492 1.78e-34 135
MS.gene065245.t1 AT4G34138 27.872 470 270 18 7 433 10 453 4.32e-32 128
MS.gene065245.t1 AT4G34135 25.850 441 287 12 7 416 10 441 7.13e-31 124
MS.gene065245.t1 AT4G34131 26.427 473 297 18 1 435 1 460 1.59e-30 123
MS.gene065245.t1 AT5G12890 25.482 467 295 17 7 437 9 458 8.39e-29 119
MS.gene065245.t1 AT4G36770 37.037 216 115 7 234 435 232 440 2.09e-28 117
MS.gene065245.t1 AT2G36800 26.338 467 291 19 6 433 10 462 2.58e-28 117
MS.gene065245.t1 AT2G16890 27.051 451 292 18 8 436 9 444 2.87e-28 117
MS.gene065245.t1 AT2G36750 26.623 462 296 16 5 433 7 458 1.50e-27 115
MS.gene065245.t1 AT2G31790 26.522 460 270 19 8 434 8 432 2.29e-27 114
MS.gene065245.t1 AT3G50740 25.652 460 293 14 8 435 7 449 3.93e-27 114
MS.gene065245.t1 AT2G18570 35.326 184 110 2 259 434 260 442 8.55e-27 112
MS.gene065245.t1 AT5G14860 25.427 468 287 17 8 436 8 452 9.18e-27 113
MS.gene065245.t1 AT1G05675 26.432 454 276 19 8 434 6 428 1.05e-26 112
MS.gene065245.t1 AT1G01420 25.855 468 275 16 8 435 11 446 1.18e-26 112
MS.gene065245.t1 AT1G01420 25.855 468 275 16 8 435 8 443 1.18e-26 112
MS.gene065245.t1 AT2G31750 25.541 462 288 16 1 436 1 432 3.45e-26 110
MS.gene065245.t1 AT2G31750 25.541 462 288 16 1 436 1 432 6.10e-26 110
MS.gene065245.t1 AT1G73880 25.625 480 277 17 8 437 14 463 1.25e-25 109
MS.gene065245.t1 AT2G36760 25.486 463 303 14 4 433 10 463 5.38e-25 107
MS.gene065245.t1 AT4G01070 25.000 460 290 15 8 435 8 444 6.68e-25 107
MS.gene065245.t1 AT2G16890 26.698 427 278 17 8 412 9 422 1.80e-24 105
MS.gene065245.t1 AT2G18560 30.000 200 126 3 243 434 159 352 2.42e-24 104
MS.gene065245.t1 AT2G30140 23.956 455 275 16 8 433 13 425 2.89e-24 105
MS.gene065245.t1 AT3G53150 25.107 466 303 14 7 435 21 477 3.02e-24 105
MS.gene065245.t1 AT2G30150 23.747 459 279 15 8 436 13 430 3.25e-24 105
MS.gene065245.t1 AT5G26310 25.164 457 290 14 8 434 7 441 4.31e-24 105
MS.gene065245.t1 AT2G30140 23.904 456 275 16 8 433 13 426 4.49e-24 104
MS.gene065245.t1 AT1G10400 25.000 484 304 19 4 451 3 463 9.50e-24 103
MS.gene065245.t1 AT2G43820 24.167 480 295 17 8 456 7 448 1.92e-23 102
MS.gene065245.t1 AT2G36970 23.333 450 315 13 8 437 10 449 2.01e-23 103
MS.gene065245.t1 AT2G30150 23.841 453 274 15 13 435 2 413 5.67e-23 101
MS.gene065245.t1 AT1G05680 25.216 464 269 19 8 434 6 428 9.30e-23 100
MS.gene065245.t1 AT5G66690 25.495 455 291 14 8 434 7 441 1.08e-22 100
MS.gene065245.t1 AT2G29730 26.222 450 280 17 7 425 4 432 1.92e-22 100
MS.gene065245.t1 AT4G15480 23.318 446 307 15 6 429 17 449 2.10e-22 100
MS.gene065245.t1 AT5G59580 25.840 476 289 21 8 455 9 448 1.28e-21 97.4
MS.gene065245.t1 AT1G01390 25.000 480 287 17 8 444 8 457 1.62e-21 97.4
MS.gene065245.t1 AT1G01390 25.000 480 287 17 8 444 25 474 2.22e-21 97.1
MS.gene065245.t1 AT1G07250 30.000 200 134 4 259 454 275 472 2.50e-21 96.7
MS.gene065245.t1 AT3G53160 25.641 468 302 20 1 433 1 457 2.55e-21 96.7
MS.gene065245.t1 AT4G15550 27.051 451 278 21 5 424 12 442 2.98e-21 96.7
MS.gene065245.t1 AT3G21760 32.161 199 115 6 248 428 258 454 3.37e-21 96.3
MS.gene065245.t1 AT3G21560 24.619 459 298 17 1 429 3 443 4.69e-21 96.3
MS.gene065245.t1 AT2G36780 36.757 185 105 6 259 433 281 463 4.86e-21 95.9
MS.gene065245.t1 AT5G59590 25.758 462 279 22 8 445 10 431 5.12e-21 95.5
MS.gene065245.t1 AT1G05530 24.124 485 291 19 5 452 4 448 6.28e-21 95.5
MS.gene065245.t1 AT4G15500 24.123 456 303 17 2 435 5 439 1.00e-20 95.1
MS.gene065245.t1 AT3G21790 29.020 255 156 6 223 454 226 478 1.11e-20 95.1
MS.gene065245.t1 AT4G15280 30.660 212 129 4 259 454 296 505 1.17e-20 95.1
MS.gene065245.t1 AT4G15280 30.660 212 129 4 259 454 264 473 1.33e-20 94.7
MS.gene065245.t1 AT2G36770 36.757 185 105 6 259 433 281 463 1.57e-20 94.4
MS.gene065245.t1 AT2G43840 23.899 477 298 16 8 455 7 447 1.85e-20 94.0
MS.gene065245.t1 AT4G15260 29.577 213 131 5 259 454 144 354 2.20e-20 92.8
MS.gene065245.t1 AT2G43840 23.899 477 298 16 8 455 7 447 2.85e-20 93.6
MS.gene065245.t1 AT1G07240 29.433 282 178 8 190 456 202 477 5.01e-20 92.8
MS.gene065245.t1 AT3G21800 32.086 187 108 4 259 428 265 449 5.64e-20 92.8
MS.gene065245.t1 AT1G24100 23.602 483 298 16 8 454 11 458 8.66e-20 92.0
MS.gene065245.t1 AT3G16520 22.917 432 294 12 9 416 6 422 4.53e-19 89.7
MS.gene065245.t1 AT3G16520 22.917 432 294 12 9 416 6 422 5.01e-19 89.7
MS.gene065245.t1 AT3G16520 34.356 163 101 3 258 416 262 422 5.07e-19 89.7
MS.gene065245.t1 AT2G29710 33.526 173 102 5 259 425 267 432 9.65e-19 89.0
MS.gene065245.t1 AT4G15490 22.717 449 301 14 8 429 8 437 1.28e-18 88.6
MS.gene065245.t1 AT1G05560 23.701 481 299 17 4 452 1 445 1.51e-18 88.2
MS.gene065245.t1 AT2G29740 31.633 196 124 6 241 428 255 448 1.54e-18 88.2
MS.gene065245.t1 AT1G05560 24.033 491 297 20 4 456 51 503 2.24e-18 88.2
MS.gene065245.t1 AT5G05870 27.757 263 172 9 206 458 204 458 2.39e-18 87.8
MS.gene065245.t1 AT3G21780 32.124 193 109 6 259 435 259 445 2.67e-18 87.8
MS.gene065245.t1 AT3G46670 26.490 453 277 21 16 448 17 433 2.76e-18 87.4
MS.gene065245.t1 AT3G11340 32.022 178 109 6 253 428 247 414 3.69e-18 87.0
MS.gene065245.t1 AT2G23250 29.646 226 137 9 220 434 197 411 3.99e-18 86.7
MS.gene065245.t1 AT3G21750 27.103 214 136 4 259 454 257 468 5.04e-18 86.7
MS.gene065245.t1 AT1G07260 28.761 226 149 6 241 456 250 473 5.90e-18 86.7
MS.gene065245.t1 AT3G22250 32.759 174 99 7 259 428 276 435 8.47e-18 85.9
MS.gene065245.t1 AT3G55700 31.841 201 127 6 247 445 248 440 1.82e-17 85.1
MS.gene065245.t1 AT3G46660 32.804 189 110 7 259 445 264 437 9.13e-17 82.8
MS.gene065245.t1 AT2G29750 32.258 186 116 6 241 418 255 438 9.61e-17 82.8
MS.gene065245.t1 AT3G46680 25.054 459 287 19 8 445 9 431 1.11e-16 82.4
MS.gene065245.t1 AT1G06000 23.002 413 244 12 8 394 10 374 1.42e-16 82.0
MS.gene065245.t1 AT3G55710 33.158 190 116 7 259 445 263 444 1.48e-16 82.0
MS.gene065245.t1 AT2G23260 28.814 177 118 5 259 435 262 430 1.78e-16 82.0
MS.gene065245.t1 AT5G38040 24.783 460 297 16 16 454 18 449 2.79e-16 81.3
MS.gene065245.t1 AT2G36790 34.595 185 109 5 259 433 280 462 7.11e-16 80.1
MS.gene065245.t1 AT4G14090 29.167 216 137 9 241 448 238 445 9.87e-16 79.7
MS.gene065245.t1 AT1G22400 31.122 196 121 7 258 450 290 474 1.16e-15 79.7
MS.gene065245.t1 AT1G78270 29.444 180 114 6 259 436 289 457 2.10e-15 78.6
MS.gene065245.t1 AT1G22380 22.174 460 312 13 8 436 13 457 2.53e-15 78.6
MS.gene065245.t1 AT5G17030 22.345 452 298 19 8 436 12 433 2.81e-15 78.2
MS.gene065245.t1 AT5G05900 23.110 463 294 17 7 436 7 440 3.05e-15 78.2
MS.gene065245.t1 AT1G22360 29.609 179 116 5 258 436 286 454 5.30e-15 77.4
MS.gene065245.t1 AT5G17050 21.444 457 297 18 8 436 12 434 7.42e-15 77.0
MS.gene065245.t1 AT2G26480 30.332 211 122 10 239 445 238 427 1.83e-14 75.9
MS.gene065245.t1 AT1G22340 26.816 179 122 4 258 436 289 458 4.32e-13 71.6
MS.gene065245.t1 AT5G17040 25.773 194 130 6 258 450 252 432 4.19e-12 68.2
MS.gene065245.t1 AT5G17040 25.773 194 130 6 258 450 150 330 6.07e-12 67.0
MS.gene065245.t1 AT3G46720 29.167 192 106 7 259 445 256 422 1.33e-11 66.6
MS.gene065245.t1 AT1G22360 29.091 165 109 5 258 418 286 446 1.44e-11 66.6
MS.gene065245.t1 AT5G38010 25.054 459 290 18 8 445 10 435 4.74e-11 65.1
MS.gene065245.t1 AT3G02100 25.389 193 129 5 258 450 278 455 7.93e-11 64.3

Find 87 sgRNAs with CRISPR-Local

Find 114 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAACAACTTTAGATGTAAAA+TGG 0.190982 2.1:-17756277 MS.gene065245:CDS
AAAGGAAAAGGGATTGTTTA+TGG 0.197222 2.1:-17756053 MS.gene065245:CDS
GGAAAACCTTATCTACTTTC+AGG 0.218620 2.1:-17756323 MS.gene065245:CDS
GAACCATATGCTGAATTTCT+TGG 0.266462 2.1:-17756356 MS.gene065245:CDS
CACATTGATGGTCTTCCCTT+TGG 0.278246 2.1:-17756821 MS.gene065245:CDS
ATCCTTTCATTGAACCCTTC+TGG 0.290366 2.1:+17756077 None:intergenic
AGGTGATGAGGTTTGGGTTA+AGG 0.297448 2.1:+17756864 None:intergenic
TTGCTTGGTCTTGAGTTAAC+AGG 0.300933 2.1:-17756161 MS.gene065245:CDS
GATCTCAAGAACCCACCTTT+AGG 0.302610 2.1:-17756539 MS.gene065245:CDS
TTGTTGGAGAGGTGAAGATA+TGG 0.326912 2.1:+17756959 None:intergenic
AAGGGATTGTTTATGGAAGT+TGG 0.335805 2.1:-17756046 MS.gene065245:CDS
CTCAATGTTCCTCACATTGA+TGG 0.339215 2.1:-17756833 MS.gene065245:CDS
TTTCCAAGAAATTCAGCATA+TGG 0.343543 2.1:+17756353 None:intergenic
AGGAACATTGAGAGGGTAAA+AGG 0.344930 2.1:+17756844 None:intergenic
GGGTTCAATGAAAGGATTAA+AGG 0.361758 2.1:-17756071 MS.gene065245:CDS
TCAATAGATTCAAATCCATT+AGG 0.363401 2.1:+17756110 None:intergenic
TGTTGGAGAGGTGAAGATAT+GGG 0.366037 2.1:+17756960 None:intergenic
ATCTCAAGAACCCACCTTTA+GGG 0.375200 2.1:-17756538 MS.gene065245:CDS
ACAAATTGAACTTCTTCTTA+AGG 0.376446 2.1:-17756726 MS.gene065245:CDS
GGCTTTAGTGCTGCAAGAAA+TGG 0.379160 2.1:+17756134 None:intergenic
GGGTAAAAGGTGATGAGGTT+TGG 0.389890 2.1:+17756857 None:intergenic
GGTAAAAGGTGATGAGGTTT+GGG 0.399738 2.1:+17756858 None:intergenic
ATGAAAGGATTAAAGGAAAA+GGG 0.406889 2.1:-17756064 MS.gene065245:CDS
TAGATGTAAAATGGGAATCA+TGG 0.412642 2.1:-17756268 MS.gene065245:CDS
TAAAGCTTGATGGATGAATC+AGG 0.414411 2.1:+17756512 None:intergenic
TTCATGTTGATAAAGCTTGA+TGG 0.415216 2.1:+17756502 None:intergenic
CAGTTTCAAGAGTTGTTGCT+TGG 0.416604 2.1:-17756176 MS.gene065245:CDS
AAAATGGGAATCATGGCTTA+AGG 0.418551 2.1:-17756261 MS.gene065245:CDS
ATTCTAGAACATCCTTCTGT+TGG 0.422732 2.1:-17756008 MS.gene065245:CDS
AATGAAAGGATTAAAGGAAA+AGG 0.426984 2.1:-17756065 MS.gene065245:CDS
GTTGAGAAAGGTGATGAAGA+TGG 0.433750 2.1:-17755843 MS.gene065245:CDS
AATCAAAGAAAACTATTTGT+GGG 0.437422 2.1:+17756696 None:intergenic
AACAACTTTAGATGTAAAAT+GGG 0.446577 2.1:-17756276 MS.gene065245:CDS
CCAAGACACAGCCAAGGAAA+AGG 0.454292 2.1:-17756575 MS.gene065245:CDS
AATGTTTCCATGGTTTGCTA+TGG 0.456397 2.1:-17756993 MS.gene065245:CDS
GCAGCACTAAAGCCACCTAA+TGG 0.459950 2.1:-17756125 MS.gene065245:CDS
TCCATGGCTGTAGCAATAAG+AGG 0.461979 2.1:+17756761 None:intergenic
TACCAGAAGGGTTCAATGAA+AGG 0.468184 2.1:-17756079 MS.gene065245:CDS
AAATCAAAGAAAACTATTTG+TGG 0.469794 2.1:+17756695 None:intergenic
ACAAGTTTAGCTGATGCAAT+TGG 0.470591 2.1:-17756404 MS.gene065245:CDS
AAATGGGAATCATGGCTTAA+GGG 0.480914 2.1:-17756260 MS.gene065245:CDS
TTGAAGAAGCTTTACCAGAA+GGG 0.488852 2.1:-17756091 MS.gene065245:CDS
ATGGATGCTGAGAATGAAGT+TGG 0.496136 2.1:-17755777 MS.gene065245:CDS
TTCACATAGCAATGTTTCCA+TGG 0.496374 2.1:-17757003 MS.gene065245:CDS
GTTGGAGAGGTGAAGATATG+GGG 0.500001 2.1:+17756961 None:intergenic
ATGTTTCCATGGTTTGCTAT+GGG 0.504571 2.1:-17756992 MS.gene065245:CDS
GCTGATGCAATTGGTTTCAA+AGG 0.508787 2.1:-17756395 MS.gene065245:CDS
AAGGTTGAGATGTTGTAACT+TGG 0.511625 2.1:+17756883 None:intergenic
AAAGGACCTGAAAGTAGATA+AGG 0.524213 2.1:+17756317 None:intergenic
CCCTCTTATTGCTACAGCCA+TGG 0.524751 2.1:-17756762 MS.gene065245:CDS
CAAGACACAGCCAAGGAAAA+GGG 0.534668 2.1:-17756574 MS.gene065245:CDS
TGAAGATGTTTCAGCACCAA+AGG 0.541229 2.1:+17756805 None:intergenic
ATTGAAGAAGCTTTACCAGA+AGG 0.550767 2.1:-17756092 MS.gene065245:CDS
GATGTTTCATAACACACTGT+GGG 0.550813 2.1:-17755986 MS.gene065245:CDS
TTGAGAAAGGTGATGAAGAT+GGG 0.554445 2.1:-17755842 MS.gene065245:CDS
GATGAATCAGGGTACCCTAA+AGG 0.554472 2.1:+17756524 None:intergenic
GTTGGTGTAGAAGTTGAGAA+AGG 0.554703 2.1:-17755855 MS.gene065245:CDS
TGAGAGGGTAAAAGGTGATG+AGG 0.564708 2.1:+17756852 None:intergenic
ATAGATTCAAATCCATTAGG+TGG 0.565472 2.1:+17756113 None:intergenic
GGGATTCAAGCATGGTTCCG+TGG 0.573311 2.1:-17756240 MS.gene065245:CDS
GAAGATGTTTCAGCACCAAA+GGG 0.579195 2.1:+17756806 None:intergenic
TTATACGATCGTTTGCACAT+AGG 0.579668 2.1:-17756428 MS.gene065245:CDS
AATGATGAGTGAAAAGATGA+AGG 0.586314 2.1:-17755877 MS.gene065245:CDS
TTTGGTGTTTCAGGTAACAA+AGG 0.589154 2.1:+17756299 None:intergenic
ATGAGTGAAAAGATGAAGGT+TGG 0.593081 2.1:-17755873 MS.gene065245:CDS
AACATTGCTATGTGAAGAGG+AGG 0.593159 2.1:+17757010 None:intergenic
GGAAACATTGCTATGTGAAG+AGG 0.596025 2.1:+17757007 None:intergenic
ACTCGTTAACACGTGTCAGT+TGG 0.599240 2.1:-17755943 MS.gene065245:CDS
TCAATGTGAGGAACATTGAG+AGG 0.602741 2.1:+17756836 None:intergenic
GAATCAGGGTACCCTAAAGG+TGG 0.606806 2.1:+17756527 None:intergenic
TGGCTTAAGGGATTCAAGCA+TGG 0.607527 2.1:-17756248 MS.gene065245:CDS
AAGAGGAGGAAGAGATCCCA+TGG 0.613093 2.1:+17757024 None:intergenic
CAAAGCTGTGAGAATTGTGA+TGG 0.617527 2.1:-17755796 MS.gene065245:CDS
AAAGCTTGATGGATGAATCA+GGG 0.625829 2.1:+17756513 None:intergenic
GTTATGAAACATCCAACAGA+AGG 0.628836 2.1:+17755996 None:intergenic
TGGGGCTGCTTCTATAACCG+AGG 0.634304 2.1:-17755967 MS.gene065245:CDS
TTCGATTTCTATCTTCATCG+AGG 0.634966 2.1:-17756478 MS.gene065245:CDS
CCATGGCTGTAGCAATAAGA+GGG 0.636758 2.1:+17756762 None:intergenic
ACACGTGTTAACGAGTGCCT+CGG 0.644065 2.1:+17755950 None:intergenic
AATCAGGGTACCCTAAAGGT+GGG 0.647549 2.1:+17756528 None:intergenic
CAATGTGAGGAACATTGAGA+GGG 0.652742 2.1:+17756837 None:intergenic
AAGTGTCCCATAGCAAACCA+TGG 0.661811 2.1:+17756986 None:intergenic
AAGGGAAGACCATCAATGTG+AGG 0.696002 2.1:+17756824 None:intergenic
GGATGTTTCATAACACACTG+TGG 0.696006 2.1:-17755987 MS.gene065245:CDS
AATGGACCAAGACACAGCCA+AGG 0.704485 2.1:-17756581 MS.gene065245:CDS
ATATGATCAACACCTACACG+TGG 0.735778 2.1:+17755912 None:intergenic
ATGTTTCATAACACACTGTG+GGG 0.743976 2.1:-17755985 MS.gene065245:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAAAATAAGATATTGAAAA+TGG + chr2.1:17756088-17756107 None:intergenic 15.0%
!! GAAAAAATCATAATGAATTA+AGG - chr2.1:17756947-17756966 MS.gene065245:CDS 15.0%
!!! CATTTTCAATATCTTATTTT+TGG - chr2.1:17756086-17756105 MS.gene065245:CDS 15.0%
!!! TTTTCTTTGATTTTCAATAT+TGG - chr2.1:17756005-17756024 MS.gene065245:CDS 15.0%
!! AAACAACTTTAGATGTAAAA+TGG - chr2.1:17756413-17756432 MS.gene065245:CDS 20.0%
!! AAATCAAAGAAAACTATTTG+TGG + chr2.1:17755998-17756017 None:intergenic 20.0%
!! AACAACTTTAGATGTAAAAT+GGG - chr2.1:17756414-17756433 MS.gene065245:CDS 20.0%
!! AATCAAAGAAAACTATTTGT+GGG + chr2.1:17755997-17756016 None:intergenic 20.0%
!!! GAATTTCTTGGAAATTTTTA+TGG - chr2.1:17756346-17756365 MS.gene065245:CDS 20.0%
!!! TCAATATCTTATTTTTGGAA+TGG - chr2.1:17756091-17756110 MS.gene065245:CDS 20.0%
!!! TGAAACTGATTTTTTTCTAA+TGG + chr2.1:17756502-17756521 None:intergenic 20.0%
!!! TTTACATCTAAAGTTGTTTT+TGG + chr2.1:17756412-17756431 None:intergenic 20.0%
! AATGAAAGGATTAAAGGAAA+AGG - chr2.1:17756625-17756644 MS.gene065245:CDS 25.0%
! ACAAATTGAACTTCTTCTTA+AGG - chr2.1:17755964-17755983 MS.gene065245:CDS 25.0%
! ATGAAAGGATTAAAGGAAAA+GGG - chr2.1:17756626-17756645 MS.gene065245:CDS 25.0%
! GCATAAAAAGTCTTCAATAT+TGG - chr2.1:17756053-17756072 MS.gene065245:CDS 25.0%
! TCAATAGATTCAAATCCATT+AGG + chr2.1:17756583-17756602 None:intergenic 25.0%
!! AATTTTTGTGAAAAGCTTCA+AGG - chr2.1:17757012-17757031 MS.gene065245:CDS 25.0%
AAAGGAAAAGGGATTGTTTA+TGG - chr2.1:17756637-17756656 MS.gene065245:CDS 30.0%
AATGATGAGTGAAAAGATGA+AGG - chr2.1:17756813-17756832 MS.gene065245:CDS 30.0%
ATAGATTCAAATCCATTAGG+TGG + chr2.1:17756580-17756599 None:intergenic 30.0%
TAGATGTAAAATGGGAATCA+TGG - chr2.1:17756422-17756441 MS.gene065245:CDS 30.0%
TCCAACAAATTAGCAAAAAG+AGG - chr2.1:17755746-17755765 MS.gene065245:CDS 30.0%
TTTCCAAGAAATTCAGCATA+TGG + chr2.1:17756340-17756359 None:intergenic 30.0%
! TTCATGTTGATAAAGCTTGA+TGG + chr2.1:17756191-17756210 None:intergenic 30.0%
!! ACCTCTTTTTGCTAATTTGT+TGG + chr2.1:17755750-17755769 None:intergenic 30.0%
!! TTGTTTTTCTGTTTGATCCA+TGG + chr2.1:17755948-17755967 None:intergenic 30.0%
!!! AAAGTTGTTTTTGGTGTTTC+AGG + chr2.1:17756403-17756422 None:intergenic 30.0%
!!! AACTTGGTTTGTGTTTTTCT+AGG + chr2.1:17755794-17755813 None:intergenic 30.0%
!!! ACTTGGTTTGTGTTTTTCTA+GGG + chr2.1:17755793-17755812 None:intergenic 30.0%
!!! TTTTTGCTAATTTGTTGGAG+AGG + chr2.1:17755745-17755764 None:intergenic 30.0%
AAAATGGGAATCATGGCTTA+AGG - chr2.1:17756429-17756448 MS.gene065245:CDS 35.0%
AAAGGACCTGAAAGTAGATA+AGG + chr2.1:17756376-17756395 None:intergenic 35.0%
AAATGGGAATCATGGCTTAA+GGG - chr2.1:17756430-17756449 MS.gene065245:CDS 35.0%
AAGGGATTGTTTATGGAAGT+TGG - chr2.1:17756644-17756663 MS.gene065245:CDS 35.0%
AAGGTTGAGATGTTGTAACT+TGG + chr2.1:17755810-17755829 None:intergenic 35.0%
ACAAGTTTAGCTGATGCAAT+TGG - chr2.1:17756286-17756305 MS.gene065245:CDS 35.0%
ATGAGTGAAAAGATGAAGGT+TGG - chr2.1:17756817-17756836 MS.gene065245:CDS 35.0%
ATGTTTCATAACACACTGTG+GGG - chr2.1:17756705-17756724 MS.gene065245:CDS 35.0%
ATTGAAGAAGCTTTACCAGA+AGG - chr2.1:17756598-17756617 MS.gene065245:CDS 35.0%
CCAAACTTGACTCAAAAACT+TGG - chr2.1:17756031-17756050 MS.gene065245:CDS 35.0%
GAACCATATGCTGAATTTCT+TGG - chr2.1:17756334-17756353 MS.gene065245:CDS 35.0%
GATGTTTCATAACACACTGT+GGG - chr2.1:17756704-17756723 MS.gene065245:CDS 35.0%
GGAAAACCTTATCTACTTTC+AGG - chr2.1:17756367-17756386 MS.gene065245:CDS 35.0%
GGGTTCAATGAAAGGATTAA+AGG - chr2.1:17756619-17756638 MS.gene065245:CDS 35.0%
GTTATGAAACATCCAACAGA+AGG + chr2.1:17756697-17756716 None:intergenic 35.0%
TCCATATGCACAAAAAACCA+CGG + chr2.1:17756470-17756489 None:intergenic 35.0%
TTATACGATCGTTTGCACAT+AGG - chr2.1:17756262-17756281 MS.gene065245:CDS 35.0%
TTCACATAGCAATGTTTCCA+TGG - chr2.1:17755687-17755706 MS.gene065245:CDS 35.0%
TTCGATTTCTATCTTCATCG+AGG - chr2.1:17756212-17756231 MS.gene065245:CDS 35.0%
TTGAAGAAGCTTTACCAGAA+GGG - chr2.1:17756599-17756618 MS.gene065245:CDS 35.0%
TTGAGAAAGGTGATGAAGAT+GGG - chr2.1:17756848-17756867 MS.gene065245:CDS 35.0%
! AAAGCTTGATGGATGAATCA+GGG + chr2.1:17756180-17756199 None:intergenic 35.0%
! TAAAGCTTGATGGATGAATC+AGG + chr2.1:17756181-17756200 None:intergenic 35.0%
! TCATCGAGGAAACTTTTGTT+CGG - chr2.1:17756226-17756245 MS.gene065245:CDS 35.0%
! TTTTGTGCATATGGAAGTGA+AGG - chr2.1:17756475-17756494 MS.gene065245:CDS 35.0%
!! AATGTTTCCATGGTTTGCTA+TGG - chr2.1:17755697-17755716 MS.gene065245:CDS 35.0%
!! ATGTTTCCATGGTTTGCTAT+GGG - chr2.1:17755698-17755717 MS.gene065245:CDS 35.0%
!! ATTCTAGAACATCCTTCTGT+TGG - chr2.1:17756682-17756701 MS.gene065245:CDS 35.0%
!! TTTGGTGTTTCAGGTAACAA+AGG + chr2.1:17756394-17756413 None:intergenic 35.0%
!!! CCAAGTTTTTGAGTCAAGTT+TGG + chr2.1:17756034-17756053 None:intergenic 35.0%
AACATTGCTATGTGAAGAGG+AGG + chr2.1:17755683-17755702 None:intergenic 40.0%
AGGAACATTGAGAGGGTAAA+AGG + chr2.1:17755849-17755868 None:intergenic 40.0%
ATATGATCAACACCTACACG+TGG + chr2.1:17756781-17756800 None:intergenic 40.0%
ATCCTTTCATTGAACCCTTC+TGG + chr2.1:17756616-17756635 None:intergenic 40.0%
ATCTCAAGAACCCACCTTTA+GGG - chr2.1:17756152-17756171 MS.gene065245:CDS 40.0%
ATGGATGCTGAGAATGAAGT+TGG - chr2.1:17756913-17756932 MS.gene065245:CDS 40.0%
CAAAGCTGTGAGAATTGTGA+TGG - chr2.1:17756894-17756913 MS.gene065245:CDS 40.0%
CAATGTGAGGAACATTGAGA+GGG + chr2.1:17755856-17755875 None:intergenic 40.0%
CAGTTTCAAGAGTTGTTGCT+TGG - chr2.1:17756514-17756533 MS.gene065245:CDS 40.0%
CTCAATGTTCCTCACATTGA+TGG - chr2.1:17755857-17755876 MS.gene065245:CDS 40.0%
GAAGATGTTTCAGCACCAAA+GGG + chr2.1:17755887-17755906 None:intergenic 40.0%
GGAAACATTGCTATGTGAAG+AGG + chr2.1:17755686-17755705 None:intergenic 40.0%
GGATGTTTCATAACACACTG+TGG - chr2.1:17756703-17756722 MS.gene065245:CDS 40.0%
GGTAAAAGGTGATGAGGTTT+GGG + chr2.1:17755835-17755854 None:intergenic 40.0%
GTTGAGAAAGGTGATGAAGA+TGG - chr2.1:17756847-17756866 MS.gene065245:CDS 40.0%
GTTGGTGTAGAAGTTGAGAA+AGG - chr2.1:17756835-17756854 MS.gene065245:CDS 40.0%
TACCAGAAGGGTTCAATGAA+AGG - chr2.1:17756611-17756630 MS.gene065245:CDS 40.0%
TCAATGTGAGGAACATTGAG+AGG + chr2.1:17755857-17755876 None:intergenic 40.0%
TGAAGATGTTTCAGCACCAA+AGG + chr2.1:17755888-17755907 None:intergenic 40.0%
TGTTGGAGAGGTGAAGATAT+GGG + chr2.1:17755733-17755752 None:intergenic 40.0%
TTGTTGGAGAGGTGAAGATA+TGG + chr2.1:17755734-17755753 None:intergenic 40.0%
! CATCGAGGAAACTTTTGTTC+GGG - chr2.1:17756227-17756246 MS.gene065245:CDS 40.0%
! CTACAGTTAACCCTTTTCCT+TGG + chr2.1:17756129-17756148 None:intergenic 40.0%
! GCTGATGCAATTGGTTTCAA+AGG - chr2.1:17756295-17756314 MS.gene065245:CDS 40.0%
!! TTGCTTGGTCTTGAGTTAAC+AGG - chr2.1:17756529-17756548 MS.gene065245:CDS 40.0%
!!! TCCGTGGTTTTTTGTGCATA+TGG - chr2.1:17756466-17756485 MS.gene065245:CDS 40.0%
AAGGGAAGACCATCAATGTG+AGG + chr2.1:17755869-17755888 None:intergenic 45.0%
AAGTGTCCCATAGCAAACCA+TGG + chr2.1:17755707-17755726 None:intergenic 45.0%
ACTCGTTAACACGTGTCAGT+TGG - chr2.1:17756747-17756766 MS.gene065245:CDS 45.0%
CAAGACACAGCCAAGGAAAA+GGG - chr2.1:17756116-17756135 MS.gene065245:CDS 45.0%
CCATGGCTGTAGCAATAAGA+GGG + chr2.1:17755931-17755950 None:intergenic 45.0%
GATCTCAAGAACCCACCTTT+AGG - chr2.1:17756151-17756170 MS.gene065245:CDS 45.0%
GGGTAAAAGGTGATGAGGTT+TGG + chr2.1:17755836-17755855 None:intergenic 45.0%
GTTGGAGAGGTGAAGATATG+GGG + chr2.1:17755732-17755751 None:intergenic 45.0%
TCCATGGCTGTAGCAATAAG+AGG + chr2.1:17755932-17755951 None:intergenic 45.0%
TGAGAGGGTAAAAGGTGATG+AGG + chr2.1:17755841-17755860 None:intergenic 45.0%
TGGCTTAAGGGATTCAAGCA+TGG - chr2.1:17756442-17756461 MS.gene065245:CDS 45.0%
! AATCAGGGTACCCTAAAGGT+GGG + chr2.1:17756165-17756184 None:intergenic 45.0%
! AGGAAACTTTTGTTCGGGAG+TGG - chr2.1:17756232-17756251 MS.gene065245:CDS 45.0%
! AGGTGATGAGGTTTGGGTTA+AGG + chr2.1:17755829-17755848 None:intergenic 45.0%
! CACATTGATGGTCTTCCCTT+TGG - chr2.1:17755869-17755888 MS.gene065245:CDS 45.0%
! GATGAATCAGGGTACCCTAA+AGG + chr2.1:17756169-17756188 None:intergenic 45.0%
! GGCTTTAGTGCTGCAAGAAA+TGG + chr2.1:17756559-17756578 None:intergenic 45.0%
!!! TTGGTTTTGTTGCCACGTGT+AGG - chr2.1:17756766-17756785 MS.gene065245:CDS 45.0%
AATGGACCAAGACACAGCCA+AGG - chr2.1:17756109-17756128 MS.gene065245:CDS 50.0%
ACACGTGTTAACGAGTGCCT+CGG + chr2.1:17756743-17756762 None:intergenic 50.0%
CCAAGACACAGCCAAGGAAA+AGG - chr2.1:17756115-17756134 MS.gene065245:CDS 50.0%
CCCTCTTATTGCTACAGCCA+TGG - chr2.1:17755928-17755947 MS.gene065245:CDS 50.0%
GCAGCACTAAAGCCACCTAA+TGG - chr2.1:17756565-17756584 MS.gene065245:CDS 50.0%
! CCTTTTCCTTGGCTGTGTCT+TGG + chr2.1:17756118-17756137 None:intergenic 50.0%
! GAATCAGGGTACCCTAAAGG+TGG + chr2.1:17756166-17756185 None:intergenic 50.0%
GGGATTCAAGCATGGTTCCG+TGG - chr2.1:17756450-17756469 MS.gene065245:CDS 55.0%
TGGGGCTGCTTCTATAACCG+AGG - chr2.1:17756723-17756742 MS.gene065245:CDS 55.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 17755668 17757044 17755668 ID=MS.gene065245
chr2.1 mRNA 17755668 17757044 17755668 ID=MS.gene065245.t1;Parent=MS.gene065245
chr2.1 exon 17755668 17757044 17755668 ID=MS.gene065245.t1.exon1;Parent=MS.gene065245.t1
chr2.1 CDS 17755668 17757044 17755668 ID=cds.MS.gene065245.t1;Parent=MS.gene065245.t1
Gene Sequence

>MS.gene065245

ATGGGATCTCTTCCTCCTCTTCACATAGCAATGTTTCCATGGTTTGCTATGGGACACTTAACCCCATATCTTCACCTCTCCAACAAATTAGCAAAAAGAGGTCACAAAATATCATTCTTCATCCCTAGAAAAACACAAACCAAGTTACAACATCTCAACCTTAACCCAAACCTCATCACCTTTTACCCTCTCAATGTTCCTCACATTGATGGTCTTCCCTTTGGTGCTGAAACATCTTCAGATGTAACTTTTTCTTTAGTCCCTCTTATTGCTACAGCCATGGATCAAACAGAAAAACAAATTGAACTTCTTCTTAAGGAACTAAACCCACAAATAGTTTTCTTTGATTTTCAATATTGGCTACCAAACTTGACTCAAAAACTTGGCATAAAAAGTCTTCAATATTGGATAACAAGTCCATTTTCAATATCTTATTTTTGGAATGGACCAAGACACAGCCAAGGAAAAGGGTTAACTGTAGATGATCTCAAGAACCCACCTTTAGGGTACCCTGATTCATCCATCAAGCTTTATCAACATGAACTTCGATTTCTATCTTCATCGAGGAAACTTTTGTTCGGGAGTGGTGTATTTTTATACGATCGTTTGCACATAGGTACAAGTTTAGCTGATGCAATTGGTTTCAAAGGCTGCAAAGAACTTGATGAACCATATGCTGAATTTCTTGGAAATTTTTATGGAAAACCTTATCTACTTTCAGGTCCTTTGTTACCTGAAACACCAAAAACAACTTTAGATGTAAAATGGGAATCATGGCTTAAGGGATTCAAGCATGGTTCCGTGGTTTTTTGTGCATATGGAAGTGAAGGTCCATTAGAAAAAAATCAGTTTCAAGAGTTGTTGCTTGGTCTTGAGTTAACAGGTTTTCCATTTCTTGCAGCACTAAAGCCACCTAATGGATTTGAATCTATTGAAGAAGCTTTACCAGAAGGGTTCAATGAAAGGATTAAAGGAAAAGGGATTGTTTATGGAAGTTGGATTCAACAACAGTTGATTCTAGAACATCCTTCTGTTGGATGTTTCATAACACACTGTGGGGCTGCTTCTATAACCGAGGCACTCGTTAACACGTGTCAGTTGGTTTTGTTGCCACGTGTAGGTGTTGATCATATTATGAATGCAAGAATGATGAGTGAAAAGATGAAGGTTGGTGTAGAAGTTGAGAAAGGTGATGAAGATGGGTTGTTTACAAAAGAAAGTGTGAGCAAAGCTGTGAGAATTGTGATGGATGCTGAGAATGAAGTTGGAAGAGAAGTGAGAAAAAATCATAATGAATTAAGGAAGTTTTTATTAAGTGAGAATTTAGAGTCTTCTTGTGTTGATAATTTTTGTGAAAAGCTTCAAGGTTTGATTTAA

Protein sequence

>MS.gene065245.t1

MGSLPPLHIAMFPWFAMGHLTPYLHLSNKLAKRGHKISFFIPRKTQTKLQHLNLNPNLITFYPLNVPHIDGLPFGAETSSDVTFSLVPLIATAMDQTEKQIELLLKELNPQIVFFDFQYWLPNLTQKLGIKSLQYWITSPFSISYFWNGPRHSQGKGLTVDDLKNPPLGYPDSSIKLYQHELRFLSSSRKLLFGSGVFLYDRLHIGTSLADAIGFKGCKELDEPYAEFLGNFYGKPYLLSGPLLPETPKTTLDVKWESWLKGFKHGSVVFCAYGSEGPLEKNQFQELLLGLELTGFPFLAALKPPNGFESIEEALPEGFNERIKGKGIVYGSWIQQQLILEHPSVGCFITHCGAASITEALVNTCQLVLLPRVGVDHIMNARMMSEKMKVGVEVEKGDEDGLFTKESVSKAVRIVMDAENEVGREVRKNHNELRKFLLSENLESSCVDNFCEKLQGLI