AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene92087


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene92087.t1 MTR_2g083480 81.917 459 82 1 1 459 1 458 0.0 767
MS.gene92087.t1 MTR_2g083420 81.046 459 62 2 1 459 1 434 0.0 764
MS.gene92087.t1 MTR_2g083390 81.046 459 62 2 1 459 1 434 0.0 761
MS.gene92087.t1 MTR_2g083430 76.253 459 108 1 1 459 1 458 0.0 694
MS.gene92087.t1 MTR_2g083380 66.885 459 151 1 1 459 18 475 0.0 615
MS.gene92087.t1 MTR_2g083490 65.577 459 157 1 1 459 1 458 0.0 612
MS.gene92087.t1 MTR_4g079250 60.304 461 178 4 1 459 1 458 0.0 570
MS.gene92087.t1 MTR_4g079270 59.870 461 180 4 1 459 1 458 0.0 566
MS.gene92087.t1 MTR_2g014900 57.395 453 191 2 7 459 6 456 0.0 533
MS.gene92087.t1 MTR_2g083360 62.996 454 62 5 6 459 27 374 0.0 530
MS.gene92087.t1 MTR_1g090270 41.215 461 252 11 7 458 14 464 5.06e-111 335
MS.gene92087.t1 MTR_2g086283 57.312 253 56 2 206 458 135 335 1.88e-92 284
MS.gene92087.t1 MTR_2g086283 65.385 130 44 1 11 140 1 129 1.89e-50 175
MS.gene92087.t1 MTR_4g059370 40.836 311 170 5 154 458 89 391 1.79e-75 241
MS.gene92087.t1 MTR_8g068360 32.777 479 284 15 2 459 6 467 3.47e-69 228
MS.gene92087.t1 MTR_8g068330 31.590 478 294 15 1 459 1 464 7.10e-67 221
MS.gene92087.t1 MTR_4g123553 32.974 464 278 14 6 455 13 457 6.12e-65 216
MS.gene92087.t1 MTR_8g068340 30.603 464 307 10 2 455 6 464 3.62e-64 214
MS.gene92087.t1 MTR_7g067330 31.613 465 265 13 2 455 3 425 5.09e-64 213
MS.gene92087.t1 MTR_6g042310 32.181 463 281 14 7 455 17 460 5.67e-61 206
MS.gene92087.t1 MTR_2g008226 32.692 468 288 14 6 455 8 466 1.28e-60 205
MS.gene92087.t1 MTR_7g067120 30.886 463 267 14 2 453 3 423 1.56e-59 201
MS.gene92087.t1 MTR_2g008225 30.361 471 296 13 2 456 9 463 1.82e-59 202
MS.gene92087.t1 MTR_6g036650 29.916 478 291 14 1 455 11 467 2.14e-59 202
MS.gene92087.t1 MTR_2g008220 30.851 470 295 12 2 456 8 462 6.38e-59 201
MS.gene92087.t1 MTR_2g014930 40.690 290 91 6 17 306 9 217 2.69e-57 189
MS.gene92087.t1 MTR_2g046620 30.968 465 286 14 6 455 14 458 4.77e-57 196
MS.gene92087.t1 MTR_2g083440 77.451 102 23 0 358 459 11 112 9.04e-52 171
MS.gene92087.t1 MTR_4g077960 30.112 445 270 16 17 443 1 422 2.58e-51 180
MS.gene92087.t1 MTR_4g079280 40.611 229 90 3 11 239 1 183 9.44e-51 170
MS.gene92087.t1 MTR_3g435310 29.399 449 262 13 6 451 16 412 3.16e-48 171
MS.gene92087.t1 MTR_1g090280 42.788 208 107 5 262 458 108 314 3.32e-45 160
MS.gene92087.t1 MTR_8g007565 29.773 440 280 11 7 428 6 434 1.13e-44 162
MS.gene92087.t1 MTR_8g007650 30.000 440 279 11 7 428 6 434 1.36e-44 162
MS.gene92087.t1 MTR_5g066410 27.655 452 277 10 11 439 1 425 2.35e-41 153
MS.gene92087.t1 MTR_8g066610 28.088 502 295 20 1 458 1 480 2.01e-34 134
MS.gene92087.t1 MTR_5g087620 26.569 478 297 17 8 444 10 474 3.37e-31 125
MS.gene92087.t1 MTR_8g071070 26.458 480 315 15 5 458 4 471 1.68e-30 123
MS.gene92087.t1 MTR_6g023665 27.740 447 282 15 9 429 14 445 2.47e-30 123
MS.gene92087.t1 MTR_4g031800 26.337 486 306 17 6 459 7 472 4.93e-30 122
MS.gene92087.t1 MTR_2g098430 24.520 469 298 17 9 441 7 455 3.16e-29 120
MS.gene92087.t1 MTR_1g062380 27.137 468 288 19 5 433 13 466 6.78e-29 119
MS.gene92087.t1 MTR_4g485590 28.537 410 234 15 8 395 9 381 2.10e-28 116
MS.gene92087.t1 MTR_0009s0240 26.585 410 274 13 5 398 4 402 2.26e-28 117
MS.gene92087.t1 MTR_8g009050 26.496 468 275 15 7 435 5 442 4.31e-28 116
MS.gene92087.t1 MTR_6g488280 26.966 445 288 13 9 429 7 438 4.52e-28 116
MS.gene92087.t1 MTR_0428s0010 26.966 445 288 13 9 429 7 438 4.52e-28 116
MS.gene92087.t1 MTR_8g465670 26.154 455 270 15 9 425 8 434 6.50e-28 116
MS.gene92087.t1 MTR_8g009055 26.696 457 288 16 7 435 5 442 5.23e-27 113
MS.gene92087.t1 MTR_8g006220 25.974 462 270 15 9 425 7 441 1.67e-26 112
MS.gene92087.t1 MTR_4g485620 25.800 469 306 14 20 458 1 457 1.89e-26 111
MS.gene92087.t1 MTR_5g045970 26.752 471 285 15 5 433 13 465 2.54e-26 111
MS.gene92087.t1 MTR_8g027885 27.887 459 277 17 6 437 16 447 3.37e-26 111
MS.gene92087.t1 MTR_8g006710 25.893 448 290 16 9 429 7 439 3.51e-26 110
MS.gene92087.t1 MTR_8g027870 26.681 476 261 18 6 437 16 447 5.26e-26 110
MS.gene92087.t1 MTR_6g038220 24.736 473 297 16 8 455 11 449 9.05e-26 109
MS.gene92087.t1 MTR_6g005600 35.385 195 106 4 256 437 255 442 1.80e-25 108
MS.gene92087.t1 MTR_8g006730 25.893 448 293 16 8 429 6 440 3.46e-25 108
MS.gene92087.t1 MTR_7g070740 24.520 469 293 14 7 434 10 458 3.84e-25 108
MS.gene92087.t1 MTR_3g009510 32.719 217 127 5 237 437 241 454 3.95e-25 108
MS.gene92087.t1 MTR_7g117170 37.569 181 97 5 260 428 268 444 5.89e-25 107
MS.gene92087.t1 MTR_8g008990 26.087 460 289 16 7 435 5 444 6.99e-25 107
MS.gene92087.t1 MTR_7g070660 23.673 452 291 15 7 422 10 443 9.25e-25 107
MS.gene92087.t1 MTR_5g035560 24.583 480 297 18 7 457 10 453 1.50e-24 106
MS.gene92087.t1 MTR_6g038230 26.141 482 288 20 8 459 11 454 1.53e-24 106
MS.gene92087.t1 MTR_4g485630 25.160 469 285 18 7 437 8 448 2.04e-24 105
MS.gene92087.t1 MTR_7g013180 26.047 430 280 13 8 420 5 413 2.58e-24 105
MS.gene92087.t1 MTR_0184s0030 34.272 213 115 7 234 426 230 437 5.60e-24 104
MS.gene92087.t1 MTR_6g038200 24.733 469 303 18 8 455 11 450 9.50e-24 103
MS.gene92087.t1 MTR_0078s0060 33.511 188 111 5 260 437 259 442 1.09e-23 103
MS.gene92087.t1 MTR_8g009063 26.226 469 276 17 7 437 12 448 1.32e-23 103
MS.gene92087.t1 MTR_4g117980 24.295 461 287 15 6 425 9 448 1.45e-23 103
MS.gene92087.t1 MTR_6g033625 25.862 464 279 18 9 435 5 440 1.53e-23 103
MS.gene92087.t1 MTR_7g070810 24.434 442 298 13 7 422 8 439 1.55e-23 103
MS.gene92087.t1 MTR_8g012635 34.259 216 116 8 237 432 242 451 2.12e-23 102
MS.gene92087.t1 MTR_8g077590 28.674 279 178 6 166 429 168 440 2.23e-23 102
MS.gene92087.t1 MTR_6g033615 25.664 452 281 16 9 435 5 426 2.44e-23 102
MS.gene92087.t1 MTR_8g466240 33.663 202 115 7 213 399 202 399 3.48e-23 102
MS.gene92087.t1 MTR_4g024020 24.784 464 292 18 7 428 8 456 4.00e-23 102
MS.gene92087.t1 MTR_6g038240 33.511 188 111 7 249 436 258 431 4.63e-23 101
MS.gene92087.t1 MTR_8g012730 32.258 217 128 5 229 429 69 282 4.82e-23 99.8
MS.gene92087.t1 MTR_4g128720 24.946 465 278 17 7 441 14 437 5.03e-23 101
MS.gene92087.t1 MTR_7g102460 25.957 470 276 21 7 428 8 453 5.04e-23 102
MS.gene92087.t1 MTR_8g009073 27.044 477 259 23 7 435 5 440 6.62e-23 101
MS.gene92087.t1 MTR_7g070780 23.605 466 305 13 5 434 8 458 6.75e-23 101
MS.gene92087.t1 MTR_0078s0010 35.484 186 106 5 260 435 260 441 7.89e-23 101
MS.gene92087.t1 MTR_0184s0040 32.447 188 113 5 260 437 275 458 8.37e-23 101
MS.gene92087.t1 MTR_0078s0190 32.447 188 113 5 260 437 275 458 8.37e-23 101
MS.gene92087.t1 MTR_7g070940 23.596 445 307 13 7 428 8 442 1.11e-22 100
MS.gene92087.t1 MTR_8g006270 28.750 240 152 6 207 428 198 436 1.13e-22 100
MS.gene92087.t1 MTR_7g013200 33.333 186 112 6 260 445 252 425 1.88e-22 99.8
MS.gene92087.t1 MTR_3g069690 32.961 179 111 5 258 435 255 425 2.68e-22 99.4
MS.gene92087.t1 MTR_5g098930 23.732 493 307 16 7 457 4 469 3.27e-22 99.4
MS.gene92087.t1 MTR_5g035580 31.884 207 131 5 253 459 257 453 3.51e-22 99.4
MS.gene92087.t1 MTR_7g013220 24.459 462 295 15 8 445 5 436 3.61e-22 99.0
MS.gene92087.t1 MTR_7g102490 25.486 463 289 17 7 428 8 455 3.74e-22 99.4
MS.gene92087.t1 MTR_2g046820 32.609 230 141 6 237 455 236 462 4.45e-22 99.0
MS.gene92087.t1 MTR_2g034990 24.070 457 299 15 1 423 4 446 5.22e-22 99.0
MS.gene92087.t1 MTR_6g033725 30.380 237 143 6 217 435 205 437 5.66e-22 98.6
MS.gene92087.t1 MTR_8g012650 32.243 214 124 5 237 436 242 448 5.72e-22 98.6
MS.gene92087.t1 MTR_1g019520 33.333 189 111 4 258 435 4 188 6.62e-22 94.4
MS.gene92087.t1 MTR_4g117950 25.390 449 279 14 6 423 4 427 8.03e-22 98.2
MS.gene92087.t1 MTR_7g070610 23.256 473 295 16 7 434 12 461 1.01e-21 98.2
MS.gene92087.t1 MTR_7g102560 29.615 260 158 5 202 437 203 461 1.11e-21 97.8
MS.gene92087.t1 MTR_1g107350 25.581 473 285 21 1 435 1 444 1.39e-21 97.4
MS.gene92087.t1 MTR_7g047030 34.409 186 108 5 260 435 260 441 1.40e-21 97.4
MS.gene92087.t1 MTR_7g047270 34.409 186 108 5 260 435 260 441 1.40e-21 97.4
MS.gene92087.t1 MTR_8g009073 32.558 215 127 7 235 435 101 311 1.70e-21 95.5
MS.gene92087.t1 MTR_7g046490 34.211 190 111 4 256 433 252 439 2.50e-21 96.7
MS.gene92087.t1 MTR_7g055710 23.326 463 306 13 7 434 10 458 2.52e-21 97.1
MS.gene92087.t1 MTR_8g009067 26.737 475 263 20 7 435 5 440 2.96e-21 96.7
MS.gene92087.t1 MTR_2g059240 24.370 476 309 13 2 439 8 470 2.97e-21 96.3
MS.gene92087.t1 MTR_8g009067 33.511 188 111 5 258 435 139 322 4.05e-21 94.7
MS.gene92087.t1 MTR_3g009490 35.329 167 92 4 284 437 3 166 4.69e-21 90.9
MS.gene92087.t1 MTR_7g102550 24.742 485 312 18 8 453 9 479 7.19e-21 95.5
MS.gene92087.t1 MTR_7g070800 23.701 481 283 16 5 434 3 450 8.61e-21 95.1
MS.gene92087.t1 MTR_7g070910 23.011 465 310 14 5 434 8 459 1.01e-20 95.1
MS.gene92087.t1 MTR_8g083290 23.690 477 278 17 6 435 2 439 1.05e-20 94.7
MS.gene92087.t1 MTR_2g046750 32.174 230 142 6 237 455 239 465 1.30e-20 94.4
MS.gene92087.t1 MTR_3g069710 32.512 203 129 6 258 458 258 454 1.38e-20 94.4
MS.gene92087.t1 MTR_8g012630 32.258 186 108 4 260 429 206 389 2.60e-20 93.2
MS.gene92087.t1 MTR_2g040530 29.167 264 157 7 220 455 203 464 3.14e-20 93.2
MS.gene92087.t1 MTR_8g006260 30.986 213 126 8 242 436 246 455 3.22e-20 93.6
MS.gene92087.t1 MTR_8g083280 30.631 222 137 7 242 457 249 459 3.72e-20 93.2
MS.gene92087.t1 MTR_4g082810 26.914 405 255 14 7 385 6 395 4.16e-20 92.4
MS.gene92087.t1 MTR_1g019510 33.333 189 111 5 258 435 255 439 4.26e-20 92.8
MS.gene92087.t1 MTR_5g045960 25.941 478 297 20 7 444 8 468 4.56e-20 93.2
MS.gene92087.t1 MTR_7g071040 22.727 462 315 13 5 434 14 465 4.84e-20 93.2
MS.gene92087.t1 MTR_8g074550 22.065 494 296 17 1 435 1 464 9.22e-20 92.0
MS.gene92087.t1 MTR_0536s0010 24.499 449 282 15 6 423 19 441 9.48e-20 92.0
MS.gene92087.t1 MTR_1g107315 33.014 209 120 7 220 413 221 424 1.02e-19 92.0
MS.gene92087.t1 MTR_3g049970 25.466 483 269 21 3 435 4 445 1.11e-19 91.7
MS.gene92087.t1 MTR_5g019580 30.126 239 147 6 237 457 265 501 1.18e-19 92.0
MS.gene92087.t1 MTR_8g064880 25.926 459 257 20 5 413 6 431 1.25e-19 91.7
MS.gene92087.t1 MTR_8g012745 27.336 289 183 10 162 429 160 442 1.33e-19 91.7
MS.gene92087.t1 MTR_5g019580 30.126 239 147 6 237 457 241 477 1.58e-19 91.3
MS.gene92087.t1 MTR_7g117405 34.783 184 107 5 260 434 276 455 2.64e-19 90.5
MS.gene92087.t1 MTR_7g013240 31.868 182 112 6 260 441 252 421 3.49e-19 90.1
MS.gene92087.t1 MTR_8g088560 29.876 241 135 9 237 455 229 457 3.60e-19 90.1
MS.gene92087.t1 MTR_3g084520 31.414 191 118 6 254 437 266 450 4.15e-19 90.1
MS.gene92087.t1 MTR_6g013900 33.143 175 103 6 256 428 285 447 4.20e-19 90.1
MS.gene92087.t1 MTR_5g090610 27.076 277 173 7 187 439 173 444 5.11e-19 89.7
MS.gene92087.t1 MTR_2g035020 23.517 472 307 17 1 437 4 456 5.89e-19 89.7
MS.gene92087.t1 MTR_8g044140 25.064 391 246 12 64 422 37 412 6.07e-19 89.4
MS.gene92087.t1 MTR_7g102450 35.227 176 102 4 265 429 267 441 6.30e-19 89.4
MS.gene92087.t1 MTR_3g084530 29.680 219 125 7 242 437 238 450 7.99e-19 89.0
MS.gene92087.t1 MTR_4g128690 23.060 464 285 17 1 435 8 428 8.09e-19 89.0
MS.gene92087.t1 MTR_3g084540 28.767 219 128 6 242 437 238 451 9.11e-19 89.0
MS.gene92087.t1 MTR_1g107360 32.020 203 122 6 258 455 270 461 1.01e-18 89.0
MS.gene92087.t1 MTR_6g033675 28.992 238 142 8 220 435 208 440 1.02e-18 89.0
MS.gene92087.t1 MTR_5g090660 29.075 227 136 7 235 439 233 456 1.06e-18 89.0
MS.gene92087.t1 MTR_5g098960 31.897 232 134 9 234 455 229 446 1.08e-18 88.6
MS.gene92087.t1 MTR_6g033660 32.584 178 114 4 260 435 266 439 1.10e-18 88.6
MS.gene92087.t1 MTR_6g035185 22.718 471 298 16 1 428 4 451 1.37e-18 88.6
MS.gene92087.t1 MTR_1g029540 22.894 463 307 18 13 451 19 455 1.68e-18 88.2
MS.gene92087.t1 MTR_5g067170 32.022 178 106 4 260 423 268 444 1.82e-18 88.2
MS.gene92087.t1 MTR_4g094920 28.922 204 136 6 258 455 279 479 1.88e-18 88.2
MS.gene92087.t1 MTR_6g038300 30.688 189 118 6 249 437 258 433 2.13e-18 87.8
MS.gene92087.t1 MTR_5g027210 25.830 271 164 6 213 451 212 477 2.34e-18 87.8
MS.gene92087.t1 MTR_7g102520 36.025 161 101 2 255 414 276 435 2.45e-18 87.8
MS.gene92087.t1 MTR_0891s0010 30.409 171 110 4 258 428 97 258 2.76e-18 85.5
MS.gene92087.t1 MTR_5g090700 30.357 224 133 7 237 439 239 460 2.89e-18 87.4
MS.gene92087.t1 MTR_6g014170 29.897 194 122 6 256 447 268 449 3.90e-18 87.0
MS.gene92087.t1 MTR_8g090095 27.586 261 167 8 210 451 218 475 3.92e-18 87.0
MS.gene92087.t1 MTR_7g070930 22.899 476 311 15 1 434 1 462 4.07e-18 87.0
MS.gene92087.t1 MTR_3g079480 23.871 465 282 19 8 428 21 457 4.43e-18 87.0
MS.gene92087.t1 MTR_7g013260 34.783 161 97 6 260 419 253 406 4.54e-18 86.7
MS.gene92087.t1 MTR_8g008970 31.915 188 114 5 258 435 257 440 4.96e-18 87.4
MS.gene92087.t1 MTR_8g008970 32.597 181 108 5 258 437 596 763 1.87e-17 85.5
MS.gene92087.t1 MTR_6g035265 30.108 186 113 5 258 428 259 442 5.16e-18 86.7
MS.gene92087.t1 MTR_4g485640 25.170 441 280 17 18 428 219 639 5.40e-18 87.0
MS.gene92087.t1 MTR_4g095008 28.431 204 137 6 258 455 264 464 6.62e-18 86.7
MS.gene92087.t1 MTR_5g090620 26.641 259 151 8 218 439 203 459 7.00e-18 86.3
MS.gene92087.t1 MTR_1g032490 25.055 455 266 18 2 413 4 426 9.32e-18 85.9
MS.gene92087.t1 MTR_7g080935 22.517 453 305 13 7 441 10 434 9.50e-18 85.9
MS.gene92087.t1 MTR_7g011470 27.719 285 171 12 171 435 172 441 1.08e-17 85.5
MS.gene92087.t1 MTR_0288s0020 29.204 226 141 8 211 430 230 442 1.13e-17 85.5
MS.gene92087.t1 MTR_2g035040 29.381 194 118 5 258 437 173 361 1.60e-17 84.7
MS.gene92087.t1 MTR_7g011470 27.437 277 167 11 178 435 176 437 1.95e-17 84.7
MS.gene92087.t1 MTR_5g072810 22.494 449 296 17 8 435 12 429 2.27e-17 84.7
MS.gene92087.t1 MTR_6g014220 30.000 180 112 6 258 435 286 453 2.34e-17 84.7
MS.gene92087.t1 MTR_8g032950 23.851 457 297 17 6 428 10 449 2.60e-17 84.7
MS.gene92087.t1 MTR_6g013920 29.016 193 120 6 256 437 285 471 2.73e-17 84.3
MS.gene92087.t1 MTR_6g014250 29.016 193 121 7 258 447 286 465 2.82e-17 84.3
MS.gene92087.t1 MTR_7g080950 31.217 189 117 7 254 442 253 428 2.84e-17 84.3
MS.gene92087.t1 MTR_3g479610 27.586 232 145 8 211 428 59 281 3.19e-17 82.8
MS.gene92087.t1 MTR_4g117960 31.492 181 108 4 258 423 266 445 4.20e-17 84.0
MS.gene92087.t1 MTR_6g014020 30.682 176 108 6 256 427 286 451 5.01e-17 83.6
MS.gene92087.t1 MTR_7g080940 29.412 187 121 5 255 441 259 434 5.41e-17 83.6
MS.gene92087.t1 MTR_3g479520 22.178 505 325 20 1 459 1 483 6.48e-17 83.2
MS.gene92087.t1 MTR_1g107375 29.437 231 133 9 220 435 214 429 7.15e-17 83.2
MS.gene92087.t1 MTR_4g008630 26.199 271 178 8 200 451 191 458 7.17e-17 83.2
MS.gene92087.t1 MTR_5g072820 22.624 442 301 14 8 435 10 424 7.88e-17 82.8
MS.gene92087.t1 MTR_5g090630 27.848 237 148 7 242 457 233 467 1.07e-16 82.4
MS.gene92087.t1 MTR_5g029800 31.111 180 109 4 258 423 264 442 1.11e-16 82.8
MS.gene92087.t1 MTR_2g008210 31.977 172 108 6 258 428 282 445 1.28e-16 82.4
MS.gene92087.t1 MTR_7g070870 22.794 408 286 12 4 395 15 409 1.30e-16 82.4
MS.gene92087.t1 MTR_4g108250 23.077 468 303 16 7 433 10 461 1.32e-16 82.4
MS.gene92087.t1 MTR_6g014200 30.220 182 113 6 256 435 283 452 1.49e-16 82.0
MS.gene92087.t1 MTR_7g070860 22.363 474 280 15 7 434 6 437 1.84e-16 82.0
MS.gene92087.t1 MTR_3g479490 29.586 169 110 4 260 428 283 442 2.30e-16 81.6
MS.gene92087.t1 MTR_7g012120 30.899 178 108 4 260 423 272 448 2.67e-16 81.6
MS.gene92087.t1 MTR_5g072840 21.847 444 302 14 8 435 10 424 2.72e-16 81.3
MS.gene92087.t1 MTR_5g016480 25.738 237 157 7 237 457 239 472 2.75e-16 81.3
MS.gene92087.t1 MTR_6g013990 28.571 182 116 6 256 435 284 453 3.06e-16 81.3
MS.gene92087.t1 MTR_8g064870 32.065 184 115 6 258 435 270 449 3.08e-16 81.3
MS.gene92087.t1 MTR_6g014190 30.337 178 110 6 260 435 97 262 3.21e-16 79.3
MS.gene92087.t1 MTR_8g059425 28.492 179 117 6 258 430 286 459 3.31e-16 81.3
MS.gene92087.t1 MTR_7g071050 28.708 209 130 7 258 456 231 430 3.36e-16 80.9
MS.gene92087.t1 MTR_6g014050 30.055 183 112 7 256 435 287 456 3.64e-16 80.9
MS.gene92087.t1 MTR_6g011340 25.368 272 171 11 182 435 198 455 3.96e-16 80.9
MS.gene92087.t1 MTR_4g082820 32.461 191 109 4 237 407 234 424 4.43e-16 80.9
MS.gene92087.t1 MTR_1g107365 29.851 201 115 7 228 413 258 447 4.70e-16 80.9
MS.gene92087.t1 MTR_7g470610 32.500 160 103 4 254 410 128 285 6.72e-16 78.6
MS.gene92087.t1 MTR_7g070583 32.500 160 103 4 254 410 128 285 6.72e-16 78.6
MS.gene92087.t1 MTR_5g040030 25.292 257 159 8 216 448 224 471 7.69e-16 80.1
MS.gene92087.t1 MTR_8g007585 29.444 180 113 6 258 435 200 367 9.88e-16 79.3
MS.gene92087.t1 MTR_5g058320 25.581 473 273 23 4 430 7 446 1.22e-15 79.3
MS.gene92087.t1 MTR_3g031450 25.561 223 136 5 221 428 213 420 1.36e-15 79.3
MS.gene92087.t1 MTR_8g056740 25.862 232 158 5 211 432 111 338 1.43e-15 78.6
MS.gene92087.t1 MTR_4g117890 28.415 183 115 4 258 425 260 441 1.77e-15 79.0
MS.gene92087.t1 MTR_6g013450 28.177 181 119 5 256 430 287 462 2.00e-15 78.6
MS.gene92087.t1 MTR_6g014270 29.121 182 115 6 256 435 285 454 2.24e-15 78.6
MS.gene92087.t1 MTR_5g072830 22.072 444 301 15 8 435 10 424 2.75e-15 78.2
MS.gene92087.t1 MTR_5g090580 24.549 277 172 8 216 457 202 476 2.77e-15 78.2
MS.gene92087.t1 MTR_3g008010 28.333 180 115 6 258 435 286 453 2.80e-15 78.2
MS.gene92087.t1 MTR_6g014240 28.571 182 116 6 256 435 253 422 2.99e-15 78.2
MS.gene92087.t1 MTR_5g072860 22.101 457 306 15 8 441 18 447 3.07e-15 78.2
MS.gene92087.t1 MTR_6g014040 29.508 183 114 6 256 428 287 464 4.46e-15 77.8
MS.gene92087.t1 MTR_6g014310 26.860 242 145 11 211 435 230 456 5.48e-15 77.4
MS.gene92087.t1 MTR_6g014150 28.962 183 115 6 256 428 283 460 5.50e-15 77.4
MS.gene92087.t1 MTR_0536s0020 28.415 183 115 4 258 425 265 446 6.46e-15 77.0
MS.gene92087.t1 MTR_0036s0220 24.793 484 251 27 8 428 12 445 9.55e-15 76.6
MS.gene92087.t1 MTR_6g014290 27.933 179 113 7 260 435 288 453 3.30e-14 75.1
MS.gene92087.t1 MTR_5g004940 35.294 119 75 2 258 375 197 314 3.45e-14 74.3
MS.gene92087.t1 MTR_1g107285 32.704 159 96 4 255 411 268 417 4.15e-14 74.7
MS.gene92087.t1 MTR_5g016660 20.930 473 294 17 2 422 3 447 6.59e-14 73.9
MS.gene92087.t1 MTR_4g118000 23.318 446 280 16 6 418 10 426 1.08e-13 73.2
MS.gene92087.t1 MTR_4g094220 29.050 179 112 6 260 435 288 454 1.16e-13 73.2
MS.gene92087.t1 MTR_1g040310 21.930 456 284 18 7 417 14 442 1.17e-13 73.2
MS.gene92087.t1 MTR_7g039550 25.681 257 146 9 221 448 5 245 1.93e-13 70.9
MS.gene92087.t1 MTR_5g464810 29.714 175 106 7 258 429 286 446 4.38e-13 71.6
MS.gene92087.t1 MTR_5g064240 29.714 175 106 7 258 429 286 446 4.38e-13 71.6
MS.gene92087.t1 MTR_6g013960 28.671 143 95 4 256 396 286 423 4.96e-13 71.2
MS.gene92087.t1 MTR_7g080900 30.058 173 111 5 258 430 264 426 9.44e-13 70.5
MS.gene92087.t1 MTR_8g009840 29.480 173 101 4 275 433 333 498 4.48e-12 68.6
MS.gene92087.t1 MTR_6g014300 26.582 158 102 6 280 435 296 441 4.49e-12 68.2
MS.gene92087.t1 MTR_5g070090 24.540 326 208 14 124 436 142 442 4.51e-12 68.2
MS.gene92087.t1 MTR_5g031830 28.777 139 95 3 258 396 281 415 4.84e-12 68.2
MS.gene92087.t1 MTR_4g064987 26.255 259 162 10 205 447 194 439 5.93e-12 67.8
MS.gene92087.t1 MTR_4g064987 26.255 259 162 10 205 447 188 433 7.09e-12 67.4
MS.gene92087.t1 MTR_6g078320 26.667 195 133 2 237 421 252 446 2.57e-11 65.9
MS.gene92087.t1 MTR_0477s0010 30.070 143 93 4 256 396 123 260 2.57e-11 65.1
MS.gene92087.t1 MTR_5g031840 31.206 141 89 5 258 396 272 406 4.45e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene92087.t1 AT5G54010 43.860 456 244 6 5 459 3 447 1.94e-136 400
MS.gene92087.t1 AT4G27570 42.763 456 244 6 7 459 6 447 3.10e-135 397
MS.gene92087.t1 AT5G54060 43.384 461 251 8 5 459 10 466 5.71e-135 397
MS.gene92087.t1 AT5G53990 44.176 455 234 7 7 459 5 441 7.64e-135 396
MS.gene92087.t1 AT4G27560 42.544 456 245 6 7 459 6 447 4.55e-133 392
MS.gene92087.t1 AT1G64920 42.702 459 239 8 7 459 5 445 1.12e-131 388
MS.gene92087.t1 AT4G09500 42.952 454 241 6 7 459 5 441 1.45e-131 387
MS.gene92087.t1 AT2G22930 44.053 454 236 6 7 459 5 441 6.65e-130 383
MS.gene92087.t1 AT1G64910 42.266 459 237 8 7 459 5 441 6.08e-128 378
MS.gene92087.t1 AT3G29630 41.630 454 246 5 5 455 3 440 1.78e-126 375
MS.gene92087.t1 AT3G29630 41.020 451 227 6 5 455 3 414 7.94e-119 354
MS.gene92087.t1 AT4G09500 40.839 453 227 7 7 459 5 416 1.13e-117 351
MS.gene92087.t1 AT1G50580 40.969 454 247 7 5 455 3 438 4.05e-116 348
MS.gene92087.t1 AT2G22590 33.405 467 279 15 7 455 14 466 7.74e-69 227
MS.gene92087.t1 AT5G49690 32.574 439 276 10 7 438 9 434 2.97e-65 217
MS.gene92087.t1 AT5G65550 30.444 473 297 16 1 455 1 459 2.79e-60 204
MS.gene92087.t1 AT2G22930 38.073 218 120 3 7 224 5 207 1.97e-44 157
MS.gene92087.t1 AT2G22930 38.095 105 60 3 358 459 187 289 3.04e-13 70.5
MS.gene92087.t1 AT5G03490 26.503 449 285 13 6 436 17 438 6.11e-34 133
MS.gene92087.t1 AT5G12890 26.439 469 295 17 4 438 6 458 4.87e-33 130
MS.gene92087.t1 AT1G73880 26.115 471 285 16 2 429 8 458 7.67e-32 127
MS.gene92087.t1 AT2G16890 28.051 467 289 23 8 446 9 456 1.35e-31 126
MS.gene92087.t1 AT1G51210 26.697 442 280 12 8 434 20 432 2.40e-30 122
MS.gene92087.t1 AT4G36770 36.530 219 120 6 231 436 228 440 2.21e-29 120
MS.gene92087.t1 AT2G36770 27.897 466 279 20 6 429 12 462 4.24e-29 119
MS.gene92087.t1 AT2G36800 27.233 459 289 17 5 428 9 457 4.77e-29 119
MS.gene92087.t1 AT2G15490 26.049 453 294 14 7 428 6 448 4.83e-29 119
MS.gene92087.t1 AT2G15480 26.134 463 295 14 7 435 9 458 5.40e-29 119
MS.gene92087.t1 AT2G36750 28.758 459 277 19 6 428 8 452 5.78e-29 119
MS.gene92087.t1 AT2G15490 26.096 456 293 15 7 428 6 451 5.85e-29 119
MS.gene92087.t1 AT4G34138 26.613 496 298 17 5 459 8 478 6.62e-29 119
MS.gene92087.t1 AT1G05675 27.333 450 278 18 8 435 6 428 7.80e-29 118
MS.gene92087.t1 AT2G16890 27.842 431 269 21 8 413 9 422 9.07e-29 117
MS.gene92087.t1 AT4G34131 26.052 499 301 19 2 455 4 479 1.10e-28 118
MS.gene92087.t1 AT2G15480 26.136 440 288 11 7 417 9 440 2.26e-28 117
MS.gene92087.t1 AT1G10400 26.151 478 301 20 7 452 6 463 2.85e-28 117
MS.gene92087.t1 AT2G31750 25.217 460 293 15 1 437 1 432 2.88e-28 117
MS.gene92087.t1 AT5G14860 26.860 484 316 17 1 455 1 475 3.59e-28 117
MS.gene92087.t1 AT2G31750 25.217 460 293 15 1 437 1 432 4.04e-28 117
MS.gene92087.t1 AT2G36780 27.489 462 279 19 7 428 13 458 1.60e-27 115
MS.gene92087.t1 AT4G34135 26.013 469 262 16 7 429 10 439 5.07e-27 113
MS.gene92087.t1 AT1G05680 26.991 452 277 18 8 435 6 428 1.09e-26 112
MS.gene92087.t1 AT3G50740 25.431 464 290 16 8 436 7 449 1.26e-26 112
MS.gene92087.t1 AT2G18570 25.690 471 285 19 1 435 1 442 5.26e-26 110
MS.gene92087.t1 AT2G18560 29.365 252 153 6 203 435 107 352 3.15e-25 107
MS.gene92087.t1 AT2G36760 26.981 467 282 18 6 429 12 462 3.63e-24 105
MS.gene92087.t1 AT3G53150 26.596 470 292 19 7 436 21 477 4.47e-24 105
MS.gene92087.t1 AT1G01420 34.579 214 119 6 237 435 238 445 9.92e-24 103
MS.gene92087.t1 AT1G01420 34.579 214 119 6 237 435 235 442 1.15e-23 103
MS.gene92087.t1 AT2G31790 24.793 484 297 19 8 459 8 456 3.04e-23 102
MS.gene92087.t1 AT5G59580 26.068 468 297 19 8 455 9 447 1.38e-22 100
MS.gene92087.t1 AT2G30140 24.468 470 305 17 8 457 13 452 1.47e-22 100
MS.gene92087.t1 AT2G29730 26.316 456 280 17 7 429 4 436 7.02e-22 98.2
MS.gene92087.t1 AT2G36970 29.386 228 149 6 216 438 229 449 8.78e-22 98.2
MS.gene92087.t1 AT2G30140 23.820 466 314 16 8 457 13 453 1.23e-21 97.4
MS.gene92087.t1 AT4G01070 33.178 214 125 6 237 436 235 444 1.66e-21 97.4
MS.gene92087.t1 AT2G43840 32.632 190 118 4 260 449 257 436 2.12e-21 96.7
MS.gene92087.t1 AT2G43820 32.124 193 121 4 258 450 255 437 2.22e-21 96.7
MS.gene92087.t1 AT3G53160 25.160 469 293 21 1 428 1 452 2.39e-21 97.1
MS.gene92087.t1 AT2G43840 32.632 190 118 4 260 449 257 436 2.51e-21 96.7
MS.gene92087.t1 AT5G59590 30.597 268 169 10 196 455 191 449 3.04e-21 96.3
MS.gene92087.t1 AT5G66690 23.385 449 311 11 8 436 7 442 9.24e-21 95.1
MS.gene92087.t1 AT4G15480 24.183 459 304 17 3 435 14 454 1.82e-20 94.4
MS.gene92087.t1 AT2G36790 27.409 467 283 20 2 428 7 457 2.47e-20 94.0
MS.gene92087.t1 AT2G30150 21.856 485 316 18 4 459 6 456 2.68e-20 93.6
MS.gene92087.t1 AT1G07250 29.004 231 152 6 237 457 246 474 5.03e-20 92.8
MS.gene92087.t1 AT4G15550 30.882 204 128 6 242 437 253 451 8.57e-20 92.0
MS.gene92087.t1 AT3G46670 31.224 237 147 9 230 458 223 451 8.77e-20 92.0
MS.gene92087.t1 AT5G05860 24.661 442 296 16 7 436 8 424 1.32e-19 91.3
MS.gene92087.t1 AT3G11340 31.667 180 111 6 258 435 251 420 2.55e-19 90.5
MS.gene92087.t1 AT5G26310 22.917 480 312 14 8 453 7 462 2.82e-19 90.5
MS.gene92087.t1 AT3G46660 33.333 216 123 9 237 446 237 437 4.36e-19 89.7
MS.gene92087.t1 AT5G05880 25.439 456 292 17 1 430 1 434 5.79e-19 89.4
MS.gene92087.t1 AT4G15500 29.952 207 131 7 258 458 267 465 5.95e-19 89.7
MS.gene92087.t1 AT3G21560 24.900 498 299 18 4 459 8 472 6.38e-19 89.7
MS.gene92087.t1 AT3G21790 28.794 257 159 6 221 455 224 478 1.12e-18 89.0
MS.gene92087.t1 AT2G30150 21.564 473 311 17 13 459 2 440 1.56e-18 88.2
MS.gene92087.t1 AT4G15490 22.560 461 312 15 1 435 1 442 2.83e-18 87.4
MS.gene92087.t1 AT1G01390 32.524 206 117 7 242 429 257 458 2.88e-18 87.8
MS.gene92087.t1 AT1G01390 32.524 206 117 7 242 429 240 441 2.98e-18 87.4
MS.gene92087.t1 AT4G15280 29.439 214 133 4 260 457 296 507 3.94e-18 87.4
MS.gene92087.t1 AT4G15280 29.439 214 133 4 260 457 264 475 4.09e-18 87.0
MS.gene92087.t1 AT1G05560 28.571 231 144 7 242 457 225 449 5.61e-18 86.7
MS.gene92087.t1 AT3G55700 31.000 200 128 6 249 446 249 440 5.80e-18 86.7
MS.gene92087.t1 AT1G05560 28.571 231 144 7 242 457 275 499 6.18e-18 86.7
MS.gene92087.t1 AT3G21760 28.774 212 133 5 260 455 271 480 8.99e-18 85.9
MS.gene92087.t1 AT1G05530 26.667 255 163 6 223 459 206 454 1.34e-17 85.5
MS.gene92087.t1 AT4G15260 28.372 215 135 5 260 457 144 356 1.53e-17 84.3
MS.gene92087.t1 AT5G05890 26.295 251 167 8 202 437 198 445 1.65e-17 85.1
MS.gene92087.t1 AT3G22250 33.520 179 93 8 258 428 274 434 1.81e-17 85.1
MS.gene92087.t1 AT3G16520 27.734 256 169 7 197 447 203 447 2.02e-17 84.7
MS.gene92087.t1 AT3G55710 34.286 140 87 4 260 397 263 399 2.96e-17 84.3
MS.gene92087.t1 AT3G21800 29.108 213 132 4 260 455 265 475 3.74e-17 84.0
MS.gene92087.t1 AT1G24100 28.947 190 126 4 260 449 268 448 4.30e-17 84.0
MS.gene92087.t1 AT3G16520 30.939 181 114 4 260 436 263 436 4.49e-17 84.0
MS.gene92087.t1 AT3G16520 30.939 181 114 4 260 436 263 436 4.62e-17 83.6
MS.gene92087.t1 AT2G29710 34.831 178 100 7 260 429 267 436 6.18e-17 83.6
MS.gene92087.t1 AT1G06000 24.752 404 249 16 8 395 10 374 9.91e-17 82.4
MS.gene92087.t1 AT3G21750 26.556 241 155 5 237 457 232 470 1.60e-16 82.0
MS.gene92087.t1 AT5G38040 24.733 469 287 21 16 455 18 449 2.16e-16 81.6
MS.gene92087.t1 AT1G07260 27.511 229 154 6 237 455 245 471 2.23e-16 81.6
MS.gene92087.t1 AT3G46690 30.244 205 133 6 198 395 191 392 2.69e-16 81.3
MS.gene92087.t1 AT1G78270 29.213 178 117 5 260 437 289 457 3.34e-16 81.3
MS.gene92087.t1 AT3G21780 28.505 214 135 5 260 457 259 470 3.91e-16 80.9
MS.gene92087.t1 AT5G17030 27.083 240 151 9 203 434 207 430 1.03e-15 79.7
MS.gene92087.t1 AT2G28080 24.597 248 165 7 215 444 220 463 1.34e-15 79.3
MS.gene92087.t1 AT1G22400 30.337 178 114 5 260 437 291 458 1.40e-15 79.3
MS.gene92087.t1 AT2G23250 29.798 198 131 5 260 455 244 435 1.90e-15 78.6
MS.gene92087.t1 AT2G29740 30.348 201 130 7 237 429 250 448 2.06e-15 78.6
MS.gene92087.t1 AT1G22360 29.775 178 115 5 260 437 287 454 2.70e-15 78.6
MS.gene92087.t1 AT5G05900 23.913 460 307 17 1 437 1 440 4.72e-15 77.4
MS.gene92087.t1 AT4G14090 27.391 230 151 8 228 449 224 445 5.05e-15 77.4
MS.gene92087.t1 AT2G23260 29.379 177 117 5 260 436 262 430 8.26e-15 76.6
MS.gene92087.t1 AT5G38010 29.317 249 151 10 207 448 207 437 1.04e-14 76.6
MS.gene92087.t1 AT1G22380 29.834 181 115 6 258 437 288 457 2.42e-14 75.5
MS.gene92087.t1 AT3G46720 30.500 200 114 7 237 428 229 411 1.22e-13 73.2
MS.gene92087.t1 AT3G02100 29.348 184 107 6 260 441 279 441 4.28e-13 71.6
MS.gene92087.t1 AT1G22360 30.882 136 91 3 260 395 287 419 1.26e-12 70.1
MS.gene92087.t1 AT1G22340 26.404 178 122 4 260 437 290 458 7.35e-12 67.8
MS.gene92087.t1 AT3G46650 29.091 220 140 8 228 441 205 414 9.76e-12 67.0

Find 87 sgRNAs with CRISPR-Local

Find 100 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACTATCTTCAAACTGTTTA+TGG 0.065632 2.4:-15850286 MS.gene92087:CDS
GGAAAACCTGTTCTGCTTTC+AGG 0.116567 2.4:-15850265 MS.gene92087:CDS
TCAAAGTAAGCTGGTAATAT+TGG 0.222813 2.4:+15850550 None:intergenic
AAAGGAAAAGGGATTGTTTA+TGG 0.232535 2.4:-15849995 MS.gene92087:CDS
GCCACCAAATACAACTTTAA+AGG 0.232790 2.4:-15850227 MS.gene92087:CDS
ATCACAGTTCCTCATGTTAA+TGG 0.256113 2.4:-15850778 MS.gene92087:CDS
AGGAACTGTGATAGGGAAAA+AGG 0.317464 2.4:+15850789 None:intergenic
GGGTTTAGTGAAAGGGTTAA+AGG 0.333009 2.4:-15850013 MS.gene92087:CDS
AAGGGATTGTTTATGGAAGT+TGG 0.335805 2.4:-15849988 MS.gene92087:CDS
ACCCTTTCACTAAACCCTTC+AGG 0.349714 2.4:+15850019 None:intergenic
TTGCTTGGTCTTGAATTAAC+AGG 0.351707 2.4:-15850103 MS.gene92087:CDS
TCCTTTAAAGTTGTATTTGG+TGG 0.360965 2.4:+15850226 None:intergenic
TTAACATGAGGAACTGTGAT+AGG 0.364501 2.4:+15850781 None:intergenic
ATAAGAGGGAACAAAGAAAA+TGG 0.368045 2.4:+15850721 None:intergenic
TCAGTAAGCAAACTAGAGTT+TGG 0.376300 2.4:-15850406 MS.gene92087:CDS
GCAGCACTTAAGCCACCTAT+TGG 0.380205 2.4:-15850067 MS.gene92087:CDS
GGCTTAAGTGCTGCAAGAAA+TGG 0.387827 2.4:+15850076 None:intergenic
ACCTCTTAATGCTAACTTGT+TGG 0.399917 2.4:+15850888 None:intergenic
GTGAAAGGGTTAAAGGAAAA+GGG 0.402436 2.4:-15850006 MS.gene92087:CDS
AAAATGGGTTGCATGGCTTA+AGG 0.414943 2.4:-15850203 MS.gene92087:CDS
AGTGAAAGGGTTAAAGGAAA+AGG 0.420115 2.4:-15850007 MS.gene92087:CDS
AAATCAAAGAAAACTATTTG+TGG 0.424765 2.4:+15850640 None:intergenic
AAATGGGTTGCATGGCTTAA+GGG 0.427342 2.4:-15850202 MS.gene92087:CDS
TTATACGATCGCATTGGAAT+AGG 0.430219 2.4:-15850370 MS.gene92087:CDS
TCCAACAAGTTAGCATTAAG+AGG 0.432689 2.4:-15850889 MS.gene92087:CDS
CAGTTTCTAGAGCTGTTGCT+TGG 0.434467 2.4:-15850118 MS.gene92087:CDS
TCTGTGGTTTATTGTGCATA+TGG 0.439244 2.4:-15850166 MS.gene92087:CDS
AAAGTTGTATTTGGTGGCTC+AGG 0.439316 2.4:+15850232 None:intergenic
CCCTCTTATTGCTACAGCCA+TGG 0.441738 2.4:-15850707 MS.gene92087:CDS
ACCTGAAGGGTTTAGTGAAA+GGG 0.441816 2.4:-15850020 MS.gene92087:CDS
TCAATCAACTCAAATCCAAT+AGG 0.441856 2.4:+15850052 None:intergenic
AGAGGACCTGAAAGCAGAAC+AGG 0.445486 2.4:+15850259 None:intergenic
AGTGATGGGTTCAAAGTTCA+AGG 0.447923 2.4:-15849819 MS.gene92087:CDS
AGAAACTGATTATGCTGTAA+TGG 0.452696 2.4:+15850133 None:intergenic
AAAGGTTGTAGAGAAATTGA+TGG 0.453691 2.4:-15850319 MS.gene92087:CDS
AATGTTTCCATGGTTTGCTA+TGG 0.456397 2.4:-15850938 MS.gene92087:CDS
ATGGATGATAAGAATGAAGT+TGG 0.460815 2.4:-15849719 MS.gene92087:CDS
TCCATGGCTGTAGCAATAAG+AGG 0.461979 2.4:+15850706 None:intergenic
TTGTTTATCTGTTTGATCCA+TGG 0.471266 2.4:+15850690 None:intergenic
AACTTGATGCATGAATCATC+AGG 0.482297 2.4:+15850457 None:intergenic
GAAGTTGTTTCAGCATTATG+AGG 0.483600 2.4:+15850751 None:intergenic
TTGGTGCTATTGCCACGTCT+TGG 0.486194 2.4:-15849866 MS.gene92087:CDS
GTTGAGAAAGGTGATGAAGA+TGG 0.486792 2.4:-15849785 MS.gene92087:CDS
TACCTGAAGGGTTTAGTGAA+AGG 0.490614 2.4:-15850021 MS.gene92087:CDS
TTGGACCGAGTATCATGTAT+TGG 0.494245 2.4:+15850569 None:intergenic
TTGAAGATGCTTTACCTGAA+GGG 0.497840 2.4:-15850033 MS.gene92087:CDS
ATGTTTCCATGGTTTGCTAT+GGG 0.504571 2.4:-15850937 MS.gene92087:CDS
TGCACATAGCAATGTTTCCA+TGG 0.504753 2.4:-15850948 MS.gene92087:CDS
TTGTTGGAGAAGTGAAGATA+TGG 0.515979 2.4:+15850904 None:intergenic
TCAGATGCAGTTGCTTTCAA+AGG 0.518452 2.4:-15850337 MS.gene92087:CDS
CTTCAGTTAAATCTCTACCT+TGG 0.530118 2.4:+15850509 None:intergenic
ATTGAAGATGCTTTACCTGA+AGG 0.532564 2.4:-15850034 MS.gene92087:CDS
TTGTTTCAGCATTATGAGGA+AGG 0.540636 2.4:+15850755 None:intergenic
TATCATGAATGCAAGAGTGA+TGG 0.542898 2.4:-15849834 MS.gene92087:CDS
CTAGTTTGCTTACTGAAGCT+AGG 0.545779 2.4:+15850413 None:intergenic
ATCATGAATGCAAGAGTGAT+GGG 0.547036 2.4:-15849833 MS.gene92087:CDS
CTTCTATTATACGATCGCAT+TGG 0.549848 2.4:-15850376 MS.gene92087:CDS
ATGGGTTCAAAGTTCAAGGT+TGG 0.553480 2.4:-15849815 MS.gene92087:CDS
TTGAGAAAGGTGATGAAGAT+GGG 0.554445 2.4:-15849784 MS.gene92087:CDS
TAACATGAGGAACTGTGATA+GGG 0.557835 2.4:+15850782 None:intergenic
AAGGTTGTAGAGAAATTGAT+GGG 0.562891 2.4:-15850318 MS.gene92087:CDS
TGGAGCTGCTTCTATAACTG+AGG 0.562901 2.4:-15849909 MS.gene92087:CDS
CTCACAGAAACTATCAAGAC+AGG 0.563684 2.4:+15849631 None:intergenic
TTCAAAGTTCAAGGTTGGTG+TGG 0.564643 2.4:-15849810 MS.gene92087:CDS
GGGATTCAAACATGGTTCTG+TGG 0.569145 2.4:-15850182 MS.gene92087:CDS
TTTGGTGGCTCAGGTAAAAG+AGG 0.569758 2.4:+15850241 None:intergenic
ATTGCTATGTGCAAAGGTGA+AGG 0.578682 2.4:+15850958 None:intergenic
TCTTGCATTCATGATATGAT+CGG 0.585265 2.4:+15849841 None:intergenic
CAAAGCTGTGAAAATTGTGA+TGG 0.587557 2.4:-15849738 MS.gene92087:CDS
GTTATGAAACATCCAACAGA+AGG 0.588945 2.4:+15849938 None:intergenic
GAATCATCAGGGAACTCTGA+AGG 0.590116 2.4:+15850469 None:intergenic
TGGCTTAAGGGATTCAAACA+TGG 0.590676 2.4:-15850190 MS.gene92087:CDS
ACTTGTTAACACGTGTCAGT+TGG 0.603876 2.4:-15849885 MS.gene92087:CDS
ATCAACTCAAATCCAATAGG+TGG 0.605154 2.4:+15850055 None:intergenic
AGCAAACTAGAGTTTGGCAG+TGG 0.611149 2.4:-15850400 MS.gene92087:CDS
ACTTGATGCATGAATCATCA+GGG 0.631590 2.4:+15850458 None:intergenic
TGTCTCCAATACATGATACT+CGG 0.631875 2.4:-15850574 MS.gene92087:CDS
GTTGGTGTGGAAGTTGAGAA+AGG 0.632692 2.4:-15849797 MS.gene92087:CDS
CCATGGCTGTAGCAATAAGA+GGG 0.634014 2.4:+15850707 None:intergenic
AAGTGTCCCATAGCAAACCA+TGG 0.639716 2.4:+15850931 None:intergenic
GGAGCTGCTTCTATAACTGA+GGG 0.647559 2.4:-15849908 MS.gene92087:CDS
GGAAACATTGCTATGTGCAA+AGG 0.662429 2.4:+15850952 None:intergenic
TGAGGAAGGCCATTAACATG+AGG 0.672414 2.4:+15850769 None:intergenic
ATATGATCGGAACCAAGACG+TGG 0.688479 2.4:+15849854 None:intergenic
TTATGAAACATCCAACAGAA+GGG 0.698749 2.4:+15849939 None:intergenic
AATATACAAAGACAAAACCA+AGG 0.715036 2.4:-15850526 MS.gene92087:CDS
GGATGTTTCATAACACACTG+TGG 0.766209 2.4:-15849929 MS.gene92087:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTCTTTGATTTTCAATAT+TGG - chr2.4:15849947-15849966 MS.gene92087:CDS 15.0%
!! AAATCAAAGAAAACTATTTG+TGG + chr2.4:15849940-15849959 None:intergenic 20.0%
!!! ATACAACTTTAAAGGAAAAA+TGG - chr2.4:15850358-15850377 MS.gene92087:CDS 20.0%
!!! CAATAAAAAGTTTCTCATTT+TGG + chr2.4:15850907-15850926 None:intergenic 20.0%
!!! TACAACTTTAAAGGAAAAAT+GGG - chr2.4:15850359-15850378 MS.gene92087:CDS 20.0%
!!! TTTTCCTTTAAAGTTGTATT+TGG + chr2.4:15850357-15850376 None:intergenic 20.0%
! AATATACAAAGACAAAACCA+AGG - chr2.4:15850051-15850070 MS.gene92087:CDS 25.0%
!! ACAAATTGAACTTCTTTTGA+AGG - chr2.4:15849906-15849925 MS.gene92087:CDS 25.0%
!! TGTATATTTTCAAAGTAAGC+TGG + chr2.4:15850039-15850058 None:intergenic 25.0%
!!! AACTTGTTCAGTGTATTTTT+AGG + chr2.4:15849736-15849755 None:intergenic 25.0%
AAAGGAAAAGGGATTGTTTA+TGG - chr2.4:15850582-15850601 MS.gene92087:CDS 30.0%
AAAGGTTGTAGAGAAATTGA+TGG - chr2.4:15850258-15850277 MS.gene92087:CDS 30.0%
AAGGTTGTAGAGAAATTGAT+GGG - chr2.4:15850259-15850278 MS.gene92087:CDS 30.0%
AGAAACTGATTATGCTGTAA+TGG + chr2.4:15850447-15850466 None:intergenic 30.0%
ATAAGAGGGAACAAAGAAAA+TGG + chr2.4:15849859-15849878 None:intergenic 30.0%
ATGGATGATAAGAATGAAGT+TGG - chr2.4:15850858-15850877 MS.gene92087:CDS 30.0%
GACTATCTTCAAACTGTTTA+TGG - chr2.4:15850291-15850310 MS.gene92087:CDS 30.0%
GGGAAAAAGGTAATAAGATT+TGG + chr2.4:15849778-15849797 None:intergenic 30.0%
TCAAAGTAAGCTGGTAATAT+TGG + chr2.4:15850030-15850049 None:intergenic 30.0%
TCAATCAACTCAAATCCAAT+AGG + chr2.4:15850528-15850547 None:intergenic 30.0%
TCTTGCATTCATGATATGAT+CGG + chr2.4:15850739-15850758 None:intergenic 30.0%
TTATGAAACATCCAACAGAA+GGG + chr2.4:15850641-15850660 None:intergenic 30.0%
TTGTTTATCTGTTTGATCCA+TGG + chr2.4:15849890-15849909 None:intergenic 30.0%
!! TCCTTTAAAGTTGTATTTGG+TGG + chr2.4:15850354-15850373 None:intergenic 30.0%
AACTTGATGCATGAATCATC+AGG + chr2.4:15850123-15850142 None:intergenic 35.0%
AAGGGATTGTTTATGGAAGT+TGG - chr2.4:15850589-15850608 MS.gene92087:CDS 35.0%
ACTTGATGCATGAATCATCA+GGG + chr2.4:15850122-15850141 None:intergenic 35.0%
AGTGAAAGGGTTAAAGGAAA+AGG - chr2.4:15850570-15850589 MS.gene92087:CDS 35.0%
ATCAACTCAAATCCAATAGG+TGG + chr2.4:15850525-15850544 None:intergenic 35.0%
ATCACAGTTCCTCATGTTAA+TGG - chr2.4:15849799-15849818 MS.gene92087:CDS 35.0%
ATCATGAATGCAAGAGTGAT+GGG - chr2.4:15850744-15850763 MS.gene92087:CDS 35.0%
ATTGAAGATGCTTTACCTGA+AGG - chr2.4:15850543-15850562 MS.gene92087:CDS 35.0%
CAAAGCTGTGAAAATTGTGA+TGG - chr2.4:15850839-15850858 MS.gene92087:CDS 35.0%
CCAAACTTGACTCAAAAACT+TGG - chr2.4:15849973-15849992 MS.gene92087:CDS 35.0%
CTTCAGTTAAATCTCTACCT+TGG + chr2.4:15850071-15850090 None:intergenic 35.0%
CTTCTATTATACGATCGCAT+TGG - chr2.4:15850201-15850220 MS.gene92087:CDS 35.0%
GCCACCAAATACAACTTTAA+AGG - chr2.4:15850350-15850369 MS.gene92087:CDS 35.0%
GTGAAAGGGTTAAAGGAAAA+GGG - chr2.4:15850571-15850590 MS.gene92087:CDS 35.0%
GTTATGAAACATCCAACAGA+AGG + chr2.4:15850642-15850661 None:intergenic 35.0%
TAACATGAGGAACTGTGATA+GGG + chr2.4:15849798-15849817 None:intergenic 35.0%
TATCATGAATGCAAGAGTGA+TGG - chr2.4:15850743-15850762 MS.gene92087:CDS 35.0%
TCAGTAAGCAAACTAGAGTT+TGG - chr2.4:15850171-15850190 MS.gene92087:CDS 35.0%
TCCAACAAGTTAGCATTAAG+AGG - chr2.4:15849688-15849707 MS.gene92087:CDS 35.0%
TCTGTGGTTTATTGTGCATA+TGG - chr2.4:15850411-15850430 MS.gene92087:CDS 35.0%
TGTCTCCAATACATGATACT+CGG - chr2.4:15850003-15850022 MS.gene92087:CDS 35.0%
TTAACATGAGGAACTGTGAT+AGG + chr2.4:15849799-15849818 None:intergenic 35.0%
TTATACGATCGCATTGGAAT+AGG - chr2.4:15850207-15850226 MS.gene92087:CDS 35.0%
TTGAAGATGCTTTACCTGAA+GGG - chr2.4:15850544-15850563 MS.gene92087:CDS 35.0%
TTGAGAAAGGTGATGAAGAT+GGG - chr2.4:15850793-15850812 MS.gene92087:CDS 35.0%
TTGTTGGAGAAGTGAAGATA+TGG + chr2.4:15849676-15849695 None:intergenic 35.0%
TTGTTTCAGCATTATGAGGA+AGG + chr2.4:15849825-15849844 None:intergenic 35.0%
! ACCTCTTAATGCTAACTTGT+TGG + chr2.4:15849692-15849711 None:intergenic 35.0%
! GAAGTTGTTTCAGCATTATG+AGG + chr2.4:15849829-15849848 None:intergenic 35.0%
!! AATGTTTCCATGGTTTGCTA+TGG - chr2.4:15849639-15849658 MS.gene92087:CDS 35.0%
!! ATGTTTCCATGGTTTGCTAT+GGG - chr2.4:15849640-15849659 MS.gene92087:CDS 35.0%
!! TAAAGGAAAAATGGGTTGCA+TGG - chr2.4:15850367-15850386 MS.gene92087:CDS 35.0%
!! TTGCTTGGTCTTGAATTAAC+AGG - chr2.4:15850474-15850493 MS.gene92087:CDS 35.0%
!!! ATTTTAGAACACCCTTCTGT+TGG - chr2.4:15850627-15850646 MS.gene92087:CDS 35.0%
!!! CCAAGTTTTTGAGTCAAGTT+TGG + chr2.4:15849976-15849995 None:intergenic 35.0%
ACCTGAAGGGTTTAGTGAAA+GGG - chr2.4:15850557-15850576 MS.gene92087:CDS 40.0%
AGGAACTGTGATAGGGAAAA+AGG + chr2.4:15849791-15849810 None:intergenic 40.0%
ATGGGTTCAAAGTTCAAGGT+TGG - chr2.4:15850762-15850781 MS.gene92087:CDS 40.0%
ATTGCTATGTGCAAAGGTGA+AGG + chr2.4:15849622-15849641 None:intergenic 40.0%
CTCACAGAAACTATCAAGAC+AGG + chr2.4:15850949-15850968 None:intergenic 40.0%
GGAAACATTGCTATGTGCAA+AGG + chr2.4:15849628-15849647 None:intergenic 40.0%
GGATGTTTCATAACACACTG+TGG - chr2.4:15850648-15850667 MS.gene92087:CDS 40.0%
GGGTTTAGTGAAAGGGTTAA+AGG - chr2.4:15850564-15850583 MS.gene92087:CDS 40.0%
GTTGAGAAAGGTGATGAAGA+TGG - chr2.4:15850792-15850811 MS.gene92087:CDS 40.0%
TACCTGAAGGGTTTAGTGAA+AGG - chr2.4:15850556-15850575 MS.gene92087:CDS 40.0%
TGCACATAGCAATGTTTCCA+TGG - chr2.4:15849629-15849648 MS.gene92087:CDS 40.0%
TGGCTTAAGGGATTCAAACA+TGG - chr2.4:15850387-15850406 MS.gene92087:CDS 40.0%
TTGGACCGAGTATCATGTAT+TGG + chr2.4:15850011-15850030 None:intergenic 40.0%
! AAAGTTGTATTTGGTGGCTC+AGG + chr2.4:15850348-15850367 None:intergenic 40.0%
! ACTTGTTAACACGTGTCAGT+TGG - chr2.4:15850692-15850711 MS.gene92087:CDS 40.0%
! TCAGATGCAGTTGCTTTCAA+AGG - chr2.4:15850240-15850259 MS.gene92087:CDS 40.0%
!! AAAATGGGTTGCATGGCTTA+AGG - chr2.4:15850374-15850393 MS.gene92087:CDS 40.0%
!! AAATGGGTTGCATGGCTTAA+GGG - chr2.4:15850375-15850394 MS.gene92087:CDS 40.0%
!! AGTGATGGGTTCAAAGTTCA+AGG - chr2.4:15850758-15850777 MS.gene92087:CDS 40.0%
!! CTAGTTTGCTTACTGAAGCT+AGG + chr2.4:15850167-15850186 None:intergenic 40.0%
!! TTCAAAGTTCAAGGTTGGTG+TGG - chr2.4:15850767-15850786 MS.gene92087:CDS 40.0%
AAGTGTCCCATAGCAAACCA+TGG + chr2.4:15849649-15849668 None:intergenic 45.0%
ACCCTTTCACTAAACCCTTC+AGG + chr2.4:15850561-15850580 None:intergenic 45.0%
AGCAAACTAGAGTTTGGCAG+TGG - chr2.4:15850177-15850196 MS.gene92087:CDS 45.0%
ATATGATCGGAACCAAGACG+TGG + chr2.4:15850726-15850745 None:intergenic 45.0%
CCATGGCTGTAGCAATAAGA+GGG + chr2.4:15849873-15849892 None:intergenic 45.0%
GAATCATCAGGGAACTCTGA+AGG + chr2.4:15850111-15850130 None:intergenic 45.0%
GGAAAACCTGTTCTGCTTTC+AGG - chr2.4:15850312-15850331 MS.gene92087:CDS 45.0%
GGAGCTGCTTCTATAACTGA+GGG - chr2.4:15850669-15850688 MS.gene92087:CDS 45.0%
GTTGGTGTGGAAGTTGAGAA+AGG - chr2.4:15850780-15850799 MS.gene92087:CDS 45.0%
TCCATGGCTGTAGCAATAAG+AGG + chr2.4:15849874-15849893 None:intergenic 45.0%
TGAGGAAGGCCATTAACATG+AGG + chr2.4:15849811-15849830 None:intergenic 45.0%
TGGAGCTGCTTCTATAACTG+AGG - chr2.4:15850668-15850687 MS.gene92087:CDS 45.0%
! GGCTTAAGTGCTGCAAGAAA+TGG + chr2.4:15850504-15850523 None:intergenic 45.0%
! GGGATTCAAACATGGTTCTG+TGG - chr2.4:15850395-15850414 MS.gene92087:CDS 45.0%
! TTTGGTGGCTCAGGTAAAAG+AGG + chr2.4:15850339-15850358 None:intergenic 45.0%
!! CAGTTTCTAGAGCTGTTGCT+TGG - chr2.4:15850459-15850478 MS.gene92087:CDS 45.0%
AGAGGACCTGAAAGCAGAAC+AGG + chr2.4:15850321-15850340 None:intergenic 50.0%
CCCTCTTATTGCTACAGCCA+TGG - chr2.4:15849870-15849889 MS.gene92087:CDS 50.0%
GCAGCACTTAAGCCACCTAT+TGG - chr2.4:15850510-15850529 MS.gene92087:CDS 50.0%
!! TTGGTGCTATTGCCACGTCT+TGG - chr2.4:15850711-15850730 MS.gene92087:CDS 50.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 15849610 15850989 15849610 ID=MS.gene92087
chr2.4 mRNA 15849610 15850989 15849610 ID=MS.gene92087.t1;Parent=MS.gene92087
chr2.4 exon 15849610 15850989 15849610 ID=MS.gene92087.t1.exon1;Parent=MS.gene92087.t1
chr2.4 CDS 15849610 15850989 15849610 ID=cds.MS.gene92087.t1;Parent=MS.gene92087.t1
Gene Sequence

>MS.gene92087

ATGGATGCTCCTTCACCTTTGCACATAGCAATGTTTCCATGGTTTGCTATGGGACACTTGACACCATATCTTCACTTCTCCAACAAGTTAGCATTAAGAGGTCACAAAATCTCATTCTTCATACCTAAAAATACACTGAACAAGTTACAACATCTCAATCTTCATCCAAATCTTATTACCTTTTTCCCTATCACAGTTCCTCATGTTAATGGCCTTCCTCATAATGCTGAAACAACTTCAGATGTACCATTTTCTTTGTTCCCTCTTATTGCTACAGCCATGGATCAAACAGATAAACAAATTGAACTTCTTTTGAAGGAGTTAAAGCCACAAATAGTTTTCTTTGATTTTCAATATTGGCTACCAAACTTGACTCAAAAACTTGGCATCAAATGTCTCCAATACATGATACTCGGTCCAATATTACCAGCTTACTTTGAAAATATACAAAGACAAAACCAAGGTAGAGATTTAACTGAAGTTGATCTCAAGAAACATCCTTCAGAGTTCCCTGATGATTCATGCATCAAGTTTCATTCTCACGAACTTCGATTCCTAGCTTCAGTAAGCAAACTAGAGTTTGGCAGTGGTCTTCTATTATACGATCGCATTGGAATAGGAACAAACTTGTCAGATGCAGTTGCTTTCAAAGGTTGTAGAGAAATTGATGGGATATATGCTGACTATCTTCAAACTGTTTATGGAAAACCTGTTCTGCTTTCAGGTCCTCTTTTACCTGAGCCACCAAATACAACTTTAAAGGAAAAATGGGTTGCATGGCTTAAGGGATTCAAACATGGTTCTGTGGTTTATTGTGCATATGGAAGTGAAAGTCCATTACAGCATAATCAGTTTCTAGAGCTGTTGCTTGGTCTTGAATTAACAGGTTTTCCATTTCTTGCAGCACTTAAGCCACCTATTGGATTTGAGTTGATTGAAGATGCTTTACCTGAAGGGTTTAGTGAAAGGGTTAAAGGAAAAGGGATTGTTTATGGAAGTTGGATTCAACAACAATTGATTTTAGAACACCCTTCTGTTGGATGTTTCATAACACACTGTGGAGCTGCTTCTATAACTGAGGGACTTGTTAACACGTGTCAGTTGGTGCTATTGCCACGTCTTGGTTCCGATCATATCATGAATGCAAGAGTGATGGGTTCAAAGTTCAAGGTTGGTGTGGAAGTTGAGAAAGGTGATGAAGATGGGTTGTTTACAAAAGAAAGTGTGTGCAAAGCTGTGAAAATTGTGATGGATGATAAGAATGAAGTTGGAAAAGAAGTAAGAGATAATCATGCCAAAATGAGAAACTTTTTATTGAGCAGCAACTTAGAATCTTCCTGTCTTGATAGTTTCTGTGAGAAACTCTATGATTTGCTCTAG

Protein sequence

>MS.gene92087.t1

MDAPSPLHIAMFPWFAMGHLTPYLHFSNKLALRGHKISFFIPKNTLNKLQHLNLHPNLITFFPITVPHVNGLPHNAETTSDVPFSLFPLIATAMDQTDKQIELLLKELKPQIVFFDFQYWLPNLTQKLGIKCLQYMILGPILPAYFENIQRQNQGRDLTEVDLKKHPSEFPDDSCIKFHSHELRFLASVSKLEFGSGLLLYDRIGIGTNLSDAVAFKGCREIDGIYADYLQTVYGKPVLLSGPLLPEPPNTTLKEKWVAWLKGFKHGSVVYCAYGSESPLQHNQFLELLLGLELTGFPFLAALKPPIGFELIEDALPEGFSERVKGKGIVYGSWIQQQLILEHPSVGCFITHCGAASITEGLVNTCQLVLLPRLGSDHIMNARVMGSKFKVGVEVEKGDEDGLFTKESVCKAVKIVMDDKNEVGKEVRDNHAKMRNFLLSSNLESSCLDSFCEKLYDLL