AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene69834

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69834.t1 MTR_2g083380 94.989 459 23 0 1 459 18 476 0.0 877
MS.gene69834.t1 MTR_2g083490 88.671 459 52 0 1 459 1 459 0.0 826
MS.gene69834.t1 MTR_2g083480 65.646 457 157 0 1 457 1 457 0.0 632
MS.gene69834.t1 MTR_2g083430 67.686 458 148 0 1 458 1 458 0.0 626
MS.gene69834.t1 MTR_4g079250 61.304 460 174 3 1 458 1 458 0.0 602
MS.gene69834.t1 MTR_4g079270 61.171 461 175 3 1 459 1 459 0.0 598
MS.gene69834.t1 MTR_2g083420 61.790 458 151 1 1 458 1 434 0.0 594
MS.gene69834.t1 MTR_2g083390 61.572 458 152 1 1 458 1 434 0.0 588
MS.gene69834.t1 MTR_2g014900 56.637 452 195 1 8 459 7 457 0.0 539
MS.gene69834.t1 MTR_2g086283 58.797 449 73 6 11 459 1 337 3.00e-162 461
MS.gene69834.t1 MTR_2g083360 49.336 452 124 4 7 458 28 374 4.06e-143 414
MS.gene69834.t1 MTR_1g090270 42.516 461 247 10 7 458 14 465 2.64e-124 370
MS.gene69834.t1 MTR_4g059370 41.975 324 175 6 142 458 75 392 7.69e-86 268
MS.gene69834.t1 MTR_8g068330 32.272 471 293 14 1 455 1 461 2.53e-70 230
MS.gene69834.t1 MTR_2g008225 32.766 470 283 11 2 454 9 462 8.08e-67 221
MS.gene69834.t1 MTR_2g008220 33.118 465 288 11 2 454 8 461 3.01e-65 217
MS.gene69834.t1 MTR_8g068360 32.083 480 287 14 2 459 6 468 5.05e-65 217
MS.gene69834.t1 MTR_8g068340 31.828 465 301 11 2 455 6 465 5.09e-65 217
MS.gene69834.t1 MTR_7g067330 33.117 462 257 15 2 452 3 423 2.19e-63 211
MS.gene69834.t1 MTR_4g079280 45.614 228 79 2 11 238 1 183 3.09e-62 200
MS.gene69834.t1 MTR_2g008226 33.891 478 268 21 7 455 9 467 1.19e-61 208
MS.gene69834.t1 MTR_6g042310 32.334 467 282 14 6 457 16 463 1.48e-61 207
MS.gene69834.t1 MTR_4g123553 32.128 470 275 15 7 456 14 459 3.86e-61 206
MS.gene69834.t1 MTR_6g036650 31.579 475 290 12 1 456 11 469 3.98e-61 206
MS.gene69834.t1 MTR_7g067120 32.829 463 257 16 2 452 3 423 2.61e-60 203
MS.gene69834.t1 MTR_2g046620 31.130 469 281 15 7 456 15 460 3.41e-59 201
MS.gene69834.t1 MTR_2g014930 39.792 289 94 5 17 305 9 217 3.12e-55 184
MS.gene69834.t1 MTR_8g007650 30.720 472 300 12 6 459 5 467 6.79e-55 190
MS.gene69834.t1 MTR_8g007565 30.508 472 301 12 6 459 5 467 5.16e-54 187
MS.gene69834.t1 MTR_5g066410 30.638 470 278 12 11 459 1 443 9.97e-53 184
MS.gene69834.t1 MTR_4g077960 30.519 462 273 14 17 456 1 436 2.36e-52 182
MS.gene69834.t1 MTR_3g435310 29.011 455 265 12 7 456 17 418 2.95e-47 168
MS.gene69834.t1 MTR_1g090280 43.478 184 99 3 279 458 133 315 1.19e-46 164
MS.gene69834.t1 MTR_2g083440 57.843 102 43 0 357 458 11 112 7.36e-39 137
MS.gene69834.t1 MTR_8g071070 27.235 481 313 15 3 457 2 471 2.42e-36 140
MS.gene69834.t1 MTR_8g066610 25.355 493 319 16 1 457 1 480 3.45e-32 128
MS.gene69834.t1 MTR_8g009073 29.194 459 273 18 6 434 4 440 1.98e-31 126
MS.gene69834.t1 MTR_7g070660 25.684 475 283 15 3 433 6 454 2.16e-30 123
MS.gene69834.t1 MTR_4g031800 25.974 462 287 16 7 434 8 448 7.61e-30 121
MS.gene69834.t1 MTR_0009s0240 25.620 484 302 18 3 458 2 455 9.20e-30 121
MS.gene69834.t1 MTR_8g009055 26.039 457 292 15 6 434 4 442 1.51e-29 120
MS.gene69834.t1 MTR_1g062380 26.237 465 269 19 5 418 13 454 3.93e-29 120
MS.gene69834.t1 MTR_2g098430 25.957 470 287 17 9 439 7 454 4.22e-29 119
MS.gene69834.t1 MTR_8g009050 27.273 462 280 17 6 434 4 442 4.54e-29 119
MS.gene69834.t1 MTR_8g009073 31.126 302 178 11 151 434 22 311 1.14e-28 115
MS.gene69834.t1 MTR_7g070810 26.126 444 287 13 7 421 8 439 4.05e-28 117
MS.gene69834.t1 MTR_6g038240 26.222 450 283 17 8 436 11 432 9.26e-28 115
MS.gene69834.t1 MTR_5g087620 26.539 471 285 19 8 433 10 464 1.01e-27 115
MS.gene69834.t1 MTR_7g013180 26.168 428 281 14 8 419 5 413 1.13e-27 115
MS.gene69834.t1 MTR_8g006730 24.444 450 302 15 8 431 6 443 2.22e-27 114
MS.gene69834.t1 MTR_8g466240 27.216 485 296 21 1 457 1 456 2.35e-27 114
MS.gene69834.t1 MTR_7g013220 24.893 466 282 17 8 439 5 436 2.94e-27 114
MS.gene69834.t1 MTR_5g045970 26.250 480 294 16 1 436 7 470 4.46e-27 114
MS.gene69834.t1 MTR_7g013200 25.328 458 275 16 8 437 5 423 5.13e-27 113
MS.gene69834.t1 MTR_8g006710 26.503 449 283 18 9 427 7 438 5.65e-27 113
MS.gene69834.t1 MTR_6g038220 25.828 453 280 17 8 436 11 431 6.16e-27 113
MS.gene69834.t1 MTR_8g009063 26.407 462 285 17 6 436 11 448 8.49e-27 112
MS.gene69834.t1 MTR_3g009510 31.203 266 150 8 199 436 194 454 1.68e-26 112
MS.gene69834.t1 MTR_8g008990 25.160 469 293 16 6 439 4 449 1.78e-26 112
MS.gene69834.t1 MTR_7g070940 24.406 463 304 14 1 433 1 447 3.46e-26 111
MS.gene69834.t1 MTR_4g117950 25.820 488 282 16 1 437 1 459 4.77e-26 110
MS.gene69834.t1 MTR_4g485590 28.049 410 235 15 8 394 9 381 5.19e-26 109
MS.gene69834.t1 MTR_7g070740 24.313 473 296 15 3 433 6 458 5.24e-26 110
MS.gene69834.t1 MTR_8g009067 27.371 464 275 20 6 434 4 440 1.88e-25 108
MS.gene69834.t1 MTR_6g038200 26.327 452 280 19 8 436 11 432 2.40e-25 108
MS.gene69834.t1 MTR_0078s0010 27.273 462 279 18 6 434 4 441 2.88e-25 108
MS.gene69834.t1 MTR_6g035265 24.948 485 276 18 1 434 6 453 2.96e-25 108
MS.gene69834.t1 MTR_8g009067 31.687 243 147 7 207 434 84 322 3.13e-25 106
MS.gene69834.t1 MTR_7g117405 27.549 461 288 19 8 436 12 458 3.23e-25 108
MS.gene69834.t1 MTR_7g070610 24.528 477 287 16 5 433 10 461 3.43e-25 108
MS.gene69834.t1 MTR_6g488280 34.254 181 106 3 259 427 258 437 3.76e-25 107
MS.gene69834.t1 MTR_0428s0010 34.254 181 106 3 259 427 258 437 3.76e-25 107
MS.gene69834.t1 MTR_6g023665 30.544 239 150 6 203 427 208 444 5.70e-25 107
MS.gene69834.t1 MTR_4g485620 25.277 451 284 14 20 436 1 432 8.05e-25 107
MS.gene69834.t1 MTR_8g012635 31.227 269 149 9 198 435 185 448 8.15e-25 107
MS.gene69834.t1 MTR_7g070870 25.553 407 275 11 4 394 15 409 8.96e-25 107
MS.gene69834.t1 MTR_7g071040 24.686 478 289 18 3 433 12 465 8.98e-25 107
MS.gene69834.t1 MTR_5g035580 25.597 461 272 20 5 433 10 431 1.05e-24 106
MS.gene69834.t1 MTR_5g035560 24.948 477 298 17 5 454 8 451 1.30e-24 106
MS.gene69834.t1 MTR_8g077590 28.955 335 193 8 112 427 115 423 1.68e-24 106
MS.gene69834.t1 MTR_8g012650 27.353 340 205 11 123 435 124 448 2.38e-24 105
MS.gene69834.t1 MTR_7g102450 26.144 459 289 17 8 436 11 449 2.41e-24 105
MS.gene69834.t1 MTR_0536s0010 25.217 460 270 18 1 421 16 440 3.10e-24 105
MS.gene69834.t1 MTR_6g038230 26.201 458 273 19 8 436 11 432 4.00e-24 104
MS.gene69834.t1 MTR_4g024020 26.882 465 295 17 7 436 8 462 4.03e-24 105
MS.gene69834.t1 MTR_2g059240 25.659 417 266 10 8 397 13 412 4.26e-24 104
MS.gene69834.t1 MTR_6g033615 34.302 172 107 4 258 427 252 419 4.90e-24 104
MS.gene69834.t1 MTR_0078s0060 25.918 463 285 16 6 435 4 441 5.08e-24 104
MS.gene69834.t1 MTR_0184s0040 26.737 475 275 19 6 439 19 461 5.13e-24 104
MS.gene69834.t1 MTR_0078s0190 26.737 475 275 19 6 439 19 461 5.13e-24 104
MS.gene69834.t1 MTR_4g117980 24.130 460 293 16 7 428 10 451 5.66e-24 104
MS.gene69834.t1 MTR_8g006270 29.143 350 202 12 117 437 114 446 6.29e-24 104
MS.gene69834.t1 MTR_6g038300 25.163 461 275 18 8 436 11 433 6.34e-24 104
MS.gene69834.t1 MTR_1g019510 25.431 464 293 18 6 439 4 444 8.44e-24 103
MS.gene69834.t1 MTR_7g117170 25.652 460 284 17 9 434 16 451 9.58e-24 103
MS.gene69834.t1 MTR_7g070930 23.480 477 306 14 1 433 1 462 1.13e-23 103
MS.gene69834.t1 MTR_7g055710 24.034 466 306 13 3 433 6 458 1.42e-23 103
MS.gene69834.t1 MTR_8g083280 24.837 459 287 18 9 436 8 439 2.00e-23 102
MS.gene69834.t1 MTR_7g046490 31.687 243 144 8 209 435 204 440 2.13e-23 102
MS.gene69834.t1 MTR_6g033725 35.754 179 109 4 258 434 263 437 2.70e-23 102
MS.gene69834.t1 MTR_2g034990 24.838 463 296 17 7 438 10 451 2.78e-23 102
MS.gene69834.t1 MTR_1g107350 24.569 464 300 16 1 434 1 444 2.97e-23 102
MS.gene69834.t1 MTR_8g465670 24.667 450 304 13 9 434 8 446 3.75e-23 102
MS.gene69834.t1 MTR_4g485630 26.582 474 260 22 7 429 8 444 3.82e-23 102
MS.gene69834.t1 MTR_6g033625 29.960 247 151 8 199 427 191 433 4.61e-23 101
MS.gene69834.t1 MTR_4g117960 25.328 458 286 16 1 421 6 444 4.82e-23 102
MS.gene69834.t1 MTR_7g070800 24.464 466 297 16 5 433 3 450 5.42e-23 101
MS.gene69834.t1 MTR_7g047030 26.190 462 280 17 8 434 6 441 5.97e-23 101
MS.gene69834.t1 MTR_7g047270 26.190 462 280 17 8 434 6 441 5.97e-23 101
MS.gene69834.t1 MTR_7g102560 26.170 470 291 16 7 436 8 461 8.28e-23 101
MS.gene69834.t1 MTR_8g012730 34.031 191 108 4 259 435 99 285 8.29e-23 99.0
MS.gene69834.t1 MTR_8g008970 26.464 461 283 18 6 434 4 440 8.61e-23 102
MS.gene69834.t1 MTR_8g008970 28.814 236 149 8 207 436 541 763 3.57e-15 78.6
MS.gene69834.t1 MTR_4g485640 26.712 438 278 17 18 428 219 640 9.27e-23 102
MS.gene69834.t1 MTR_1g107315 25.835 449 271 16 1 412 1 424 1.09e-22 100
MS.gene69834.t1 MTR_0184s0030 31.604 212 126 6 231 425 228 437 1.19e-22 100
MS.gene69834.t1 MTR_8g027870 25.275 455 296 15 9 439 19 453 2.03e-22 100
MS.gene69834.t1 MTR_7g070780 23.667 469 304 14 3 433 6 458 2.48e-22 99.8
MS.gene69834.t1 MTR_7g102550 26.237 465 288 19 8 432 9 458 4.26e-22 99.0
MS.gene69834.t1 MTR_6g005600 27.545 334 206 10 123 434 124 443 4.30e-22 99.0
MS.gene69834.t1 MTR_5g027210 26.506 249 150 3 212 428 212 459 8.44e-22 98.2
MS.gene69834.t1 MTR_2g046820 34.579 214 126 6 236 438 236 446 8.93e-22 97.8
MS.gene69834.t1 MTR_8g032950 23.799 458 293 18 7 427 11 449 9.99e-22 98.2
MS.gene69834.t1 MTR_8g006220 24.289 457 305 12 9 434 7 453 1.10e-21 97.8
MS.gene69834.t1 MTR_5g039900 24.086 465 301 15 5 433 10 458 1.32e-21 97.8
MS.gene69834.t1 MTR_1g019520 31.606 193 117 4 258 439 5 193 1.91e-21 92.8
MS.gene69834.t1 MTR_6g033675 31.373 204 130 6 236 434 242 440 2.06e-21 97.1
MS.gene69834.t1 MTR_8g012745 31.944 216 125 7 237 436 237 446 2.19e-21 97.1
MS.gene69834.t1 MTR_7g102490 25.000 472 294 17 7 436 8 461 2.32e-21 97.1
MS.gene69834.t1 MTR_7g102460 26.446 484 270 20 7 436 8 459 2.67e-21 96.7
MS.gene69834.t1 MTR_3g049970 25.690 471 282 16 3 434 4 445 2.83e-21 96.7
MS.gene69834.t1 MTR_6g033660 34.831 178 110 4 259 434 266 439 2.93e-21 96.7
MS.gene69834.t1 MTR_6g035185 23.779 471 302 16 1 433 6 457 3.06e-21 96.7
MS.gene69834.t1 MTR_8g044140 24.838 463 273 14 46 454 19 460 3.35e-21 96.3
MS.gene69834.t1 MTR_5g098930 24.364 472 293 16 7 438 4 451 3.69e-21 96.3
MS.gene69834.t1 MTR_3g009490 33.533 167 95 4 283 436 3 166 4.50e-21 90.9
MS.gene69834.t1 MTR_8g012630 32.461 191 111 4 259 435 206 392 6.52e-21 95.1
MS.gene69834.t1 MTR_2g035020 24.161 447 296 15 7 421 10 445 6.54e-21 95.5
MS.gene69834.t1 MTR_1g032490 25.000 448 274 17 2 412 4 426 6.59e-21 95.5
MS.gene69834.t1 MTR_8g006260 29.500 200 125 6 241 427 246 442 7.29e-21 95.5
MS.gene69834.t1 MTR_8g027885 31.088 193 117 5 259 439 265 453 7.33e-21 95.5
MS.gene69834.t1 MTR_7g070910 23.591 479 293 18 3 433 6 459 9.22e-21 95.1
MS.gene69834.t1 MTR_7g102520 33.511 188 113 5 259 436 281 466 1.43e-20 94.7
MS.gene69834.t1 MTR_8g074550 24.587 484 295 17 1 434 1 464 1.79e-20 94.4
MS.gene69834.t1 MTR_2g046750 34.259 216 128 7 236 440 239 451 2.35e-20 93.6
MS.gene69834.t1 MTR_3g479520 23.210 461 289 16 8 427 15 451 2.97e-20 93.6
MS.gene69834.t1 MTR_5g016660 23.110 463 287 15 12 427 14 454 3.46e-20 93.2
MS.gene69834.t1 MTR_5g067170 32.065 184 108 5 258 425 267 449 4.19e-20 93.2
MS.gene69834.t1 MTR_2g040530 32.632 190 116 4 259 438 261 448 4.25e-20 92.8
MS.gene69834.t1 MTR_8g064880 25.658 456 273 16 3 416 4 435 4.65e-20 92.8
MS.gene69834.t1 MTR_0536s0020 31.122 196 116 6 258 435 266 460 5.03e-20 92.8
MS.gene69834.t1 MTR_3g079480 23.176 466 283 16 8 427 21 457 5.09e-20 92.8
MS.gene69834.t1 MTR_4g117890 30.387 181 106 5 258 421 261 438 5.74e-20 92.8
MS.gene69834.t1 MTR_7g013240 23.502 434 278 15 8 420 6 406 5.76e-20 92.4
MS.gene69834.t1 MTR_4g108250 23.591 479 303 16 1 433 1 462 6.52e-20 92.4
MS.gene69834.t1 MTR_7g013260 23.908 435 276 16 8 420 6 407 7.36e-20 92.0
MS.gene69834.t1 MTR_3g069690 26.908 249 161 7 199 434 185 425 1.12e-19 91.7
MS.gene69834.t1 MTR_5g019580 30.594 219 127 5 239 433 238 455 1.23e-19 91.7
MS.gene69834.t1 MTR_5g019580 30.594 219 127 5 239 433 262 479 1.26e-19 91.7
MS.gene69834.t1 MTR_5g090660 23.504 468 305 14 8 438 5 456 1.29e-19 92.0
MS.gene69834.t1 MTR_7g080950 25.541 462 281 21 5 439 3 428 1.32e-19 91.3
MS.gene69834.t1 MTR_5g072860 23.282 451 299 14 8 436 18 443 1.39e-19 91.3
MS.gene69834.t1 MTR_5g029800 31.280 211 113 7 258 437 265 474 1.43e-19 91.7
MS.gene69834.t1 MTR_2g035040 31.461 178 107 4 258 421 174 350 1.44e-19 90.9
MS.gene69834.t1 MTR_5g040030 25.414 362 222 11 104 433 117 462 2.00e-19 91.3
MS.gene69834.t1 MTR_8g090095 28.794 257 165 7 197 438 206 459 2.09e-19 90.9
MS.gene69834.t1 MTR_8g088560 31.225 253 142 9 204 438 199 437 2.28e-19 90.9
MS.gene69834.t1 MTR_5g045960 25.102 490 274 19 6 436 7 462 2.35e-19 90.9
MS.gene69834.t1 MTR_5g090610 27.368 285 173 8 199 455 183 461 2.60e-19 90.5
MS.gene69834.t1 MTR_8g064870 25.225 444 278 13 7 416 10 433 2.85e-19 90.5
MS.gene69834.t1 MTR_5g090630 24.043 470 293 17 8 438 5 449 5.23e-19 89.7
MS.gene69834.t1 MTR_8g083290 33.520 179 112 5 259 436 269 441 6.27e-19 89.4
MS.gene69834.t1 MTR_7g012120 31.351 185 111 5 259 428 272 455 8.42e-19 89.4
MS.gene69834.t1 MTR_5g098960 30.544 239 140 10 229 456 225 448 9.25e-19 89.0
MS.gene69834.t1 MTR_3g479490 24.353 464 282 20 7 427 5 442 1.15e-18 88.6
MS.gene69834.t1 MTR_4g128690 25.754 431 285 15 1 419 8 415 1.66e-18 88.2
MS.gene69834.t1 MTR_6g035295 23.297 455 296 16 6 422 10 449 2.25e-18 87.8
MS.gene69834.t1 MTR_4g128720 24.831 443 278 19 7 425 14 425 2.94e-18 87.4
MS.gene69834.t1 MTR_4g094920 30.811 185 119 6 259 437 281 462 3.60e-18 87.4
MS.gene69834.t1 MTR_5g075440 27.500 240 145 6 215 440 213 437 5.85e-18 86.3
MS.gene69834.t1 MTR_4g118000 23.165 436 280 15 12 417 16 426 6.52e-18 86.3
MS.gene69834.t1 MTR_7g070860 23.377 462 289 15 7 433 6 437 9.07e-18 85.9
MS.gene69834.t1 MTR_7g080940 29.570 186 120 5 253 438 258 432 1.11e-17 85.5
MS.gene69834.t1 MTR_4g095008 31.902 163 104 5 259 417 266 425 1.22e-17 85.9
MS.gene69834.t1 MTR_1g040310 22.940 449 299 13 1 416 8 442 1.49e-17 85.5
MS.gene69834.t1 MTR_7g080935 29.032 186 121 5 253 438 258 432 1.79e-17 85.1
MS.gene69834.t1 MTR_7g470610 33.333 168 105 5 253 418 128 290 2.01e-17 82.8
MS.gene69834.t1 MTR_7g070583 33.333 168 105 5 253 418 128 290 2.01e-17 82.8
MS.gene69834.t1 MTR_4g008630 28.216 241 158 6 209 437 204 441 3.39e-17 84.0
MS.gene69834.t1 MTR_3g069710 27.839 273 166 10 202 457 196 454 3.58e-17 84.0
MS.gene69834.t1 MTR_5g072810 24.161 447 290 17 8 434 12 429 4.60e-17 83.6
MS.gene69834.t1 MTR_1g029540 24.444 450 285 18 13 437 19 438 8.64e-17 82.8
MS.gene69834.t1 MTR_6g014170 30.435 184 114 6 253 434 266 437 1.07e-16 82.4
MS.gene69834.t1 MTR_0891s0010 27.094 203 134 6 259 458 99 290 1.11e-16 80.9
MS.gene69834.t1 MTR_1g107365 28.641 206 122 6 220 412 254 447 1.55e-16 82.4
MS.gene69834.t1 MTR_5g004940 29.319 191 121 4 253 434 193 378 1.60e-16 81.6
MS.gene69834.t1 MTR_5g090670 23.125 480 294 17 9 438 6 460 1.62e-16 82.0
MS.gene69834.t1 MTR_5g090580 26.132 287 180 7 199 458 197 478 1.65e-16 82.0
MS.gene69834.t1 MTR_3g084540 22.601 469 300 16 8 436 6 451 1.66e-16 82.0
MS.gene69834.t1 MTR_5g090700 28.409 264 163 9 199 438 199 460 2.88e-16 81.3
MS.gene69834.t1 MTR_4g082810 33.758 157 95 3 236 384 240 395 3.31e-16 80.9
MS.gene69834.t1 MTR_6g014020 30.337 178 110 6 253 426 284 451 3.96e-16 80.9
MS.gene69834.t1 MTR_6g014200 29.891 184 115 6 253 434 281 452 7.18e-16 80.1
MS.gene69834.t1 MTR_3g084520 28.708 209 127 7 259 451 272 474 7.29e-16 80.1
MS.gene69834.t1 MTR_6g078320 25.527 474 279 16 8 428 11 463 8.86e-16 79.7
MS.gene69834.t1 MTR_5g072830 22.940 449 290 14 8 434 10 424 1.11e-15 79.3
MS.gene69834.t1 MTR_5g016480 29.412 170 114 5 259 427 275 439 1.20e-15 79.3
MS.gene69834.t1 MTR_3g479610 29.586 169 110 4 259 427 122 281 1.49e-15 77.8
MS.gene69834.t1 MTR_1g107360 26.087 253 161 7 219 456 222 463 1.52e-15 79.0
MS.gene69834.t1 MTR_3g031450 22.297 444 280 17 8 427 18 420 1.88e-15 79.0
MS.gene69834.t1 MTR_6g013450 29.282 181 121 4 253 429 285 462 2.56e-15 78.6
MS.gene69834.t1 MTR_6g013920 29.379 177 111 6 253 427 283 447 3.21e-15 78.2
MS.gene69834.t1 MTR_3g031400 22.432 477 268 16 3 436 10 427 3.44e-15 77.8
MS.gene69834.t1 MTR_3g084530 28.796 191 123 5 253 436 266 450 3.65e-15 77.8
MS.gene69834.t1 MTR_6g013440 26.190 252 156 10 199 434 219 456 4.12e-15 77.8
MS.gene69834.t1 MTR_4g082820 36.420 162 88 5 259 406 264 424 5.97e-15 77.0
MS.gene69834.t1 MTR_6g013900 28.814 177 112 6 253 427 283 447 1.25e-14 76.3
MS.gene69834.t1 MTR_6g014220 27.869 183 121 5 253 429 282 459 1.52e-14 75.9
MS.gene69834.t1 MTR_7g039550 29.018 224 134 6 220 421 5 225 1.67e-14 73.9
MS.gene69834.t1 MTR_8g007585 29.213 178 112 6 259 434 202 367 2.14e-14 75.1
MS.gene69834.t1 MTR_1g107375 28.194 227 139 7 220 434 215 429 2.51e-14 75.1
MS.gene69834.t1 MTR_0036s0220 23.191 470 299 21 8 439 12 457 2.55e-14 75.5
MS.gene69834.t1 MTR_8g009840 26.368 201 132 3 273 459 332 530 3.72e-14 75.1
MS.gene69834.t1 MTR_4g064987 23.529 459 273 21 1 425 1 415 3.88e-14 74.7
MS.gene69834.t1 MTR_3g008010 28.235 170 109 6 259 425 288 447 6.73e-14 73.9
MS.gene69834.t1 MTR_6g014190 27.322 183 122 5 253 429 91 268 7.33e-14 72.4
MS.gene69834.t1 MTR_7g080900 23.965 459 292 18 3 436 7 433 9.30e-14 73.6
MS.gene69834.t1 MTR_2g008210 29.412 170 111 5 259 427 284 445 1.13e-13 73.2
MS.gene69834.t1 MTR_6g014187 28.261 184 118 6 253 434 284 455 1.14e-13 73.2
MS.gene69834.t1 MTR_6g014250 26.344 186 123 6 253 436 282 455 1.24e-13 73.2
MS.gene69834.t1 MTR_4g064987 23.226 465 273 21 1 425 1 421 1.67e-13 72.8
MS.gene69834.t1 MTR_6g014310 25.417 240 151 9 210 434 230 456 3.00e-13 72.0
MS.gene69834.t1 MTR_4g094220 28.889 180 113 7 258 434 287 454 4.64e-13 71.2
MS.gene69834.t1 MTR_6g014270 27.174 184 120 6 253 434 283 454 7.16e-13 70.9
MS.gene69834.t1 MTR_8g056740 26.009 223 147 5 220 430 121 337 9.43e-13 70.1
MS.gene69834.t1 MTR_6g014290 29.167 144 95 4 253 394 282 420 1.23e-12 70.1
MS.gene69834.t1 MTR_6g014150 27.219 169 111 5 253 419 281 439 2.14e-12 69.3
MS.gene69834.t1 MTR_0536s0030 31.655 139 81 4 309 434 194 331 4.33e-12 67.8
MS.gene69834.t1 MTR_6g013960 30.282 142 96 3 253 394 284 422 2.02e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69834.t1 AT5G54010 48.465 456 224 5 5 459 3 448 3.12e-155 448
MS.gene69834.t1 AT5G53990 47.162 458 217 7 6 458 4 441 1.42e-149 433
MS.gene69834.t1 AT5G54060 47.722 461 232 6 5 459 10 467 2.21e-147 429
MS.gene69834.t1 AT4G27570 46.374 455 226 6 8 458 7 447 6.74e-146 424
MS.gene69834.t1 AT1G64910 45.815 454 229 6 6 458 4 441 1.56e-144 421
MS.gene69834.t1 AT4G27560 45.934 455 228 6 8 458 7 447 2.51e-143 418
MS.gene69834.t1 AT2G22930 46.930 456 217 7 6 456 4 439 1.67e-142 415
MS.gene69834.t1 AT1G64920 46.304 460 222 8 7 459 5 446 4.47e-142 414
MS.gene69834.t1 AT4G09500 45.495 455 223 8 7 456 5 439 6.92e-140 409
MS.gene69834.t1 AT3G29630 44.079 456 231 5 5 454 3 440 1.36e-136 400
MS.gene69834.t1 AT1G50580 43.833 454 235 5 5 455 3 439 1.81e-133 392
MS.gene69834.t1 AT3G29630 43.046 453 214 6 5 454 3 414 3.53e-128 378
MS.gene69834.t1 AT4G09500 43.392 454 209 9 7 456 5 414 1.82e-126 374
MS.gene69834.t1 AT5G49690 34.423 459 276 11 7 455 9 452 9.36e-74 239
MS.gene69834.t1 AT2G22590 34.632 462 283 14 5 454 12 466 1.56e-69 229
MS.gene69834.t1 AT5G65550 32.976 467 279 18 7 454 8 459 3.90e-65 217
MS.gene69834.t1 AT2G22930 43.556 225 105 4 6 226 4 210 8.79e-57 190
MS.gene69834.t1 AT2G22930 41.237 97 53 2 363 456 192 287 9.24e-16 78.2
MS.gene69834.t1 AT5G03490 27.088 443 283 11 8 434 19 437 3.08e-38 145
MS.gene69834.t1 AT1G51210 26.742 445 275 14 8 433 20 432 2.88e-34 133
MS.gene69834.t1 AT2G15490 27.887 459 282 17 7 428 6 452 7.86e-34 133
MS.gene69834.t1 AT2G15490 27.632 456 284 16 7 428 6 449 9.13e-34 132
MS.gene69834.t1 AT5G12890 26.923 468 293 16 4 437 6 458 9.56e-34 132
MS.gene69834.t1 AT2G15480 27.974 454 280 18 7 426 9 449 1.45e-32 129
MS.gene69834.t1 AT2G36750 29.221 462 286 16 7 436 9 461 1.49e-32 129
MS.gene69834.t1 AT1G05675 27.391 460 268 18 8 436 6 430 2.79e-32 128
MS.gene69834.t1 AT2G15480 27.740 447 277 17 7 419 9 443 8.13e-32 127
MS.gene69834.t1 AT2G36770 28.540 459 280 16 7 427 13 461 1.22e-31 127
MS.gene69834.t1 AT4G34138 27.163 497 289 14 5 456 8 476 2.36e-31 126
MS.gene69834.t1 AT2G31790 28.172 465 260 19 8 436 8 434 4.88e-31 124
MS.gene69834.t1 AT1G73880 25.527 427 267 14 2 399 8 412 5.71e-31 124
MS.gene69834.t1 AT1G05680 26.374 455 279 18 8 436 6 430 6.23e-31 124
MS.gene69834.t1 AT4G34131 26.667 465 298 17 2 436 4 455 7.52e-30 121
MS.gene69834.t1 AT2G16890 27.069 447 283 17 8 429 9 437 1.58e-29 120
MS.gene69834.t1 AT2G36780 27.837 467 275 16 6 427 12 461 2.63e-29 120
MS.gene69834.t1 AT4G34135 26.411 443 282 15 7 416 10 441 3.87e-29 119
MS.gene69834.t1 AT3G50740 26.569 478 290 18 8 449 7 459 3.71e-28 117
MS.gene69834.t1 AT2G36800 27.371 464 292 17 5 431 9 464 1.19e-27 115
MS.gene69834.t1 AT2G16890 26.279 430 276 15 8 412 9 422 3.18e-27 113
MS.gene69834.t1 AT4G36770 34.419 215 122 6 234 435 232 440 7.17e-27 112
MS.gene69834.t1 AT1G10400 25.602 457 276 17 7 429 6 432 7.66e-27 112
MS.gene69834.t1 AT2G18570 24.130 460 305 13 1 434 1 442 1.13e-26 112
MS.gene69834.t1 AT2G36760 28.294 463 290 17 7 436 13 466 2.68e-26 111
MS.gene69834.t1 AT2G18560 28.571 252 163 5 199 434 102 352 9.09e-25 105
MS.gene69834.t1 AT3G53160 25.519 482 304 20 1 443 1 466 9.61e-25 107
MS.gene69834.t1 AT2G43820 25.541 462 271 18 8 438 7 426 1.20e-24 106
MS.gene69834.t1 AT2G31750 25.482 467 276 19 1 433 1 429 2.00e-24 105
MS.gene69834.t1 AT5G14860 25.758 462 293 17 1 429 1 445 3.96e-24 105
MS.gene69834.t1 AT2G31750 25.482 467 276 19 1 433 1 429 4.13e-24 105
MS.gene69834.t1 AT3G53150 25.105 474 301 15 7 436 21 484 1.79e-23 103
MS.gene69834.t1 AT5G59580 24.516 465 309 17 8 455 9 448 5.62e-23 101
MS.gene69834.t1 AT5G59590 25.370 473 295 20 8 458 10 446 5.98e-23 101
MS.gene69834.t1 AT1G01420 24.385 488 289 19 8 453 11 460 1.80e-22 100
MS.gene69834.t1 AT1G01420 24.385 488 289 19 8 453 8 457 1.92e-22 100
MS.gene69834.t1 AT2G29730 33.040 227 135 7 210 425 212 432 1.99e-22 100
MS.gene69834.t1 AT2G30150 22.869 481 304 18 8 458 13 456 6.35e-22 98.6
MS.gene69834.t1 AT4G14090 25.431 464 278 19 9 443 16 440 8.96e-22 97.8
MS.gene69834.t1 AT2G30140 23.451 452 269 15 8 427 13 419 1.33e-21 97.4
MS.gene69834.t1 AT2G30140 23.789 454 266 16 8 427 13 420 3.08e-21 96.3
MS.gene69834.t1 AT4G15480 24.837 459 300 16 3 434 14 454 3.30e-21 96.7
MS.gene69834.t1 AT2G43840 24.729 461 276 16 8 438 7 426 3.66e-21 95.9
MS.gene69834.t1 AT2G43840 24.459 462 276 16 8 438 7 426 4.02e-21 95.9
MS.gene69834.t1 AT1G06000 22.837 416 251 10 8 399 10 379 4.55e-21 95.5
MS.gene69834.t1 AT5G38040 24.786 468 287 20 16 454 18 449 6.68e-21 95.1
MS.gene69834.t1 AT2G30150 22.899 476 300 18 13 458 2 440 1.18e-20 94.4
MS.gene69834.t1 AT1G01390 24.286 490 292 19 1 444 1 457 1.59e-20 94.4
MS.gene69834.t1 AT1G01390 24.286 490 292 19 1 444 18 474 1.86e-20 94.4
MS.gene69834.t1 AT2G28080 21.489 470 326 16 12 454 22 475 2.66e-20 93.6
MS.gene69834.t1 AT5G26310 23.144 458 300 16 8 435 7 442 3.13e-20 93.6
MS.gene69834.t1 AT1G07250 29.437 231 151 6 236 456 246 474 6.32e-20 92.4
MS.gene69834.t1 AT4G15550 24.576 472 292 19 2 436 7 451 9.05e-20 92.0
MS.gene69834.t1 AT2G36970 26.250 240 164 6 202 437 219 449 1.14e-19 92.0
MS.gene69834.t1 AT5G05880 23.368 475 296 18 1 437 1 445 2.49e-19 90.5
MS.gene69834.t1 AT1G05560 24.131 489 300 20 3 454 2 456 2.79e-19 90.5
MS.gene69834.t1 AT1G05560 24.131 489 300 20 3 454 52 506 4.44e-19 90.1
MS.gene69834.t1 AT1G07260 30.568 229 147 6 236 454 245 471 4.72e-19 89.7
MS.gene69834.t1 AT4G01070 30.481 187 115 5 259 434 261 443 9.07e-19 89.0
MS.gene69834.t1 AT4G15490 23.340 467 300 18 1 434 1 442 1.05e-18 89.0
MS.gene69834.t1 AT5G66690 28.512 242 150 6 236 459 233 469 1.61e-18 88.2
MS.gene69834.t1 AT1G24100 22.343 461 295 17 8 438 11 438 2.25e-18 87.8
MS.gene69834.t1 AT1G05530 23.529 476 269 20 8 436 5 432 3.83e-18 87.0
MS.gene69834.t1 AT2G36790 37.912 182 99 6 259 427 280 460 6.74e-18 86.7
MS.gene69834.t1 AT2G29710 33.155 187 111 6 245 425 254 432 8.07e-18 86.3
MS.gene69834.t1 AT5G05860 24.664 446 290 18 7 435 8 424 8.25e-18 85.9
MS.gene69834.t1 AT4G15280 29.389 262 154 7 207 439 231 490 1.06e-17 85.9
MS.gene69834.t1 AT4G15280 29.389 262 154 7 207 439 199 458 1.25e-17 85.5
MS.gene69834.t1 AT3G46670 22.689 476 321 19 2 457 3 451 1.54e-17 85.1
MS.gene69834.t1 AT3G21560 25.054 467 280 19 8 434 12 448 1.65e-17 85.1
MS.gene69834.t1 AT5G05890 26.848 257 167 9 199 437 196 449 2.29e-17 84.7
MS.gene69834.t1 AT3G16520 29.442 197 120 5 258 437 262 456 3.42e-17 84.0
MS.gene69834.t1 AT3G11340 27.155 232 152 7 203 427 192 413 3.51e-17 84.0
MS.gene69834.t1 AT3G21760 28.934 197 122 4 259 439 271 465 3.84e-17 84.0
MS.gene69834.t1 AT4G15500 22.907 454 314 14 1 434 1 438 5.04e-17 83.6
MS.gene69834.t1 AT4G15260 28.141 199 122 5 259 439 144 339 6.67e-17 82.4
MS.gene69834.t1 AT3G16520 30.303 165 109 3 258 418 262 424 8.10e-17 82.8
MS.gene69834.t1 AT3G16520 30.303 165 109 3 258 418 262 424 1.01e-16 82.8
MS.gene69834.t1 AT1G22360 32.022 178 111 5 259 436 287 454 1.27e-16 82.4
MS.gene69834.t1 AT3G21800 29.319 191 116 4 259 432 265 453 2.20e-16 81.6
MS.gene69834.t1 AT3G21790 27.230 213 136 4 259 454 268 478 2.69e-16 81.6
MS.gene69834.t1 AT2G29740 30.000 200 130 5 236 427 250 447 2.73e-16 81.3
MS.gene69834.t1 AT2G29750 31.892 185 116 6 241 417 255 437 4.19e-16 80.9
MS.gene69834.t1 AT3G46690 22.831 438 291 15 8 425 9 419 4.97e-16 80.5
MS.gene69834.t1 AT1G78270 29.609 179 115 6 259 436 289 457 6.04e-16 80.5
MS.gene69834.t1 AT3G46700 23.504 468 308 18 8 459 9 442 1.69e-15 79.0
MS.gene69834.t1 AT3G21750 28.643 199 122 4 259 439 257 453 2.39e-15 78.6
MS.gene69834.t1 AT3G46660 22.961 466 290 21 2 437 8 434 9.44e-15 76.6
MS.gene69834.t1 AT1G22400 31.953 169 105 5 259 427 291 449 1.06e-14 76.6
MS.gene69834.t1 AT5G38010 27.419 248 155 9 210 449 209 439 1.07e-14 76.3
MS.gene69834.t1 AT5G05900 22.198 464 309 17 1 436 1 440 1.45e-14 75.9
MS.gene69834.t1 AT2G23250 26.699 206 134 4 252 448 237 434 1.57e-14 75.9
MS.gene69834.t1 AT3G02100 24.138 493 283 25 8 458 13 456 1.77e-14 75.9
MS.gene69834.t1 AT5G05870 25.207 242 163 8 202 435 200 431 5.36e-14 74.3
MS.gene69834.t1 AT3G21780 28.426 197 123 4 259 439 259 453 6.63e-14 73.9
MS.gene69834.t1 AT2G26480 24.138 261 165 10 197 444 186 426 7.24e-14 73.9
MS.gene69834.t1 AT1G22360 30.055 183 122 4 259 438 287 466 7.91e-14 73.9
MS.gene69834.t1 AT1G22340 27.528 178 120 4 259 436 290 458 1.01e-13 73.6
MS.gene69834.t1 AT5G17050 28.492 179 115 5 258 436 269 434 1.52e-13 72.8
MS.gene69834.t1 AT5G17030 21.573 445 310 17 8 436 12 433 2.41e-13 72.4
MS.gene69834.t1 AT2G23260 26.087 184 128 3 253 436 256 431 6.64e-13 70.9
MS.gene69834.t1 AT1G30530 28.571 182 113 5 258 437 263 429 7.87e-13 70.5
MS.gene69834.t1 AT3G46720 23.026 456 299 16 8 449 9 426 5.52e-12 67.8

Find 99 sgRNAs with CRISPR-Local

Find 126 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTGCTTTGAAAAGAAAAT+TGG 0.170253 2.2:-13935174 MS.gene69834:CDS
GATACAGCAGCAATTAATTT+TGG 0.171458 2.2:-13934727 MS.gene69834:CDS
GGTAAGCCTGTTCTTCTTTC+GGG 0.172406 2.2:-13935026 MS.gene69834:CDS
TCAGATGTTTCTTTCTCTTT+AGG 0.182567 2.2:-13935488 MS.gene69834:CDS
TATCACTAATACTAAGATTA+TGG 0.193070 2.2:-13934595 MS.gene69834:CDS
TAAAGATTAAAGGATGAAAT+AGG 0.198172 2.2:+13935215 None:intergenic
ACCCTTTCTTTAAACCCTTC+TGG 0.205952 2.2:+13934780 None:intergenic
TTGAAAAGAAAATTGGAATT+TGG 0.235366 2.2:-13935167 MS.gene69834:CDS
AAATCAAAGAAAACAATTTC+AGG 0.241134 2.2:+13935398 None:intergenic
TTCATGATAATAAAGATTAA+AGG 0.250966 2.2:+13935205 None:intergenic
TGGTAAGCCTGTTCTTCTTT+CGG 0.257859 2.2:-13935027 MS.gene69834:CDS
GATTACATAGAACAAGAATT+TGG 0.262127 2.2:-13935047 MS.gene69834:CDS
CCTCTTATTAAACCAAGATT+TGG 0.271816 2.2:-13934421 MS.gene69834:CDS
CAGTTTCATGAATTGTTGTT+AGG 0.283546 2.2:-13934879 MS.gene69834:CDS
CAAATTGATGGTCTTCCATT+TGG 0.286079 2.2:-13935524 MS.gene69834:CDS
AAAGAAAGGGTTAAGGAAAA+AGG 0.291849 2.2:-13934768 MS.gene69834:CDS
AAGTGATTAGATTTGGATAA+AGG 0.295105 2.2:+13935567 None:intergenic
GTACCTTCACTCATTCTTGA+TGG 0.295615 2.2:+13935281 None:intergenic
CCCTTTCTTTAAACCCTTCT+GGG 0.310582 2.2:+13934781 None:intergenic
TTCTATGATAGGATCTATAA+TGG 0.313374 2.2:-13935131 MS.gene69834:CDS
GATGAAATAGGGAACCCTTT+TGG 0.318592 2.2:+13935227 None:intergenic
CCAAATCTTGGTTTAATAAG+AGG 0.322518 2.2:+13934421 None:intergenic
GAATCAAGTCTTTGCAATAC+TGG 0.328126 2.2:-13935340 MS.gene69834:CDS
TTCTTGGCTTGGAGGATTCA+AGG 0.337694 2.2:-13934955 MS.gene69834:CDS
CTCAATGTTCCTCAAATTGA+TGG 0.349141 2.2:-13935536 MS.gene69834:CDS
AGAAAATTGGAATTTGGAAG+TGG 0.352232 2.2:-13935161 MS.gene69834:CDS
TTGTTAGGGCTTGAGTTAAC+AGG 0.354653 2.2:-13934864 MS.gene69834:CDS
TTGGAGTCATTCTATGTTGA+TGG 0.359264 2.2:-13934402 MS.gene69834:CDS
GTTGTTTCGTGACACATTGC+GGG 0.368839 2.2:-13934689 MS.gene69834:CDS
TTGTTTGAGAGGTGAAGATA+TGG 0.371284 2.2:+13935662 None:intergenic
ATGAGATTGGCAGAGAAGTT+AGG 0.396566 2.2:-13934467 MS.gene69834:CDS
AAAGATTAAAGGATGAAATA+GGG 0.396696 2.2:+13935216 None:intergenic
ATCACTAATACTAAGATTAT+GGG 0.406326 2.2:-13934594 MS.gene69834:CDS
CTCAAACAAATTAGCCAAAA+GGG 0.407355 2.2:-13935648 MS.gene69834:CDS
TTAAGCTTAAGTGATGCAAT+TGG 0.409271 2.2:-13935107 MS.gene69834:CDS
CCCAGAAGGGTTTAAAGAAA+GGG 0.411883 2.2:-13934781 MS.gene69834:CDS
CAATTCTTAAACCTCCTGTT+GGG 0.414744 2.2:-13934827 MS.gene69834:CDS
CATAGAATGACTCCAAATCT+TGG 0.419825 2.2:+13934409 None:intergenic
TTAGGTGGTTCAGGTAAAAC+AGG 0.424268 2.2:+13935002 None:intergenic
GCATTATATGAAACTGTTGC+TGG 0.427071 2.2:+13935308 None:intergenic
TTCGTGACACATTGCGGGGC+AGG 0.428495 2.2:-13934684 MS.gene69834:CDS
TCCCAGAAGGGTTTAAAGAA+AGG 0.428619 2.2:-13934782 MS.gene69834:CDS
TGTTCTATGTAATCAACATA+AGG 0.436879 2.2:+13935056 None:intergenic
AAATGGGGTTCTTGGCTTGG+AGG 0.453582 2.2:-13934963 MS.gene69834:CDS
GATTATGGGTAGGGAATTGA+AGG 0.455059 2.2:-13934580 MS.gene69834:CDS
AATCAAAGAAAACAATTTCA+GGG 0.456045 2.2:+13935399 None:intergenic
ATGTTTCCATGGTTTGCAAT+GGG 0.460769 2.2:-13935695 MS.gene69834:CDS
AAGGTTGAATTGTTCTAACT+TGG 0.463537 2.2:+13935586 None:intergenic
GTGAAGAAGGGTGAAGAAGA+TGG 0.465141 2.2:-13934546 MS.gene69834:CDS
AGTTTCATGAATTGTTGTTA+GGG 0.467339 2.2:-13934878 MS.gene69834:CDS
ATGGGTAGGGAATTGAAGGT+TGG 0.469802 2.2:-13934576 MS.gene69834:CDS
TCTCAAACAAATTAGCCAAA+AGG 0.469915 2.2:-13935649 MS.gene69834:CDS
GTGTTGATGCCACATTTAGA+TGG 0.471941 2.2:-13934624 MS.gene69834:CDS
ACCTCCTGTTGGGTTTGAAA+CGG 0.479710 2.2:-13934817 MS.gene69834:CDS
GCAATTCTTAAACCTCCTGT+TGG 0.481352 2.2:-13934828 MS.gene69834:CDS
TAAGCTTAAGTGATGCAATT+GGG 0.482649 2.2:-13935106 MS.gene69834:CDS
ACAGGTCCCGAAAGAAGAAC+AGG 0.491442 2.2:+13935020 None:intergenic
GAAAATTGGAATTTGGAAGT+GGG 0.493556 2.2:-13935160 MS.gene69834:CDS
GTGATGCAATTGGGTTCAAA+GGG 0.494596 2.2:-13935097 MS.gene69834:CDS
AAAAGCTTCGAGAATTAGTA+AGG 0.498384 2.2:-13934371 MS.gene69834:CDS
AGTGATGCAATTGGGTTCAA+AGG 0.500112 2.2:-13935098 MS.gene69834:CDS
TGCACATAGCAATGTTTCCA+TGG 0.501915 2.2:-13935706 MS.gene69834:CDS
TCATTAGTTTATTGTGCACT+TGG 0.508637 2.2:-13934927 MS.gene69834:CDS
ATGGATGATGAAAATGAGAT+TGG 0.511299 2.2:-13934480 MS.gene69834:CDS
GGTTGGAGTTGAAGTGAAGA+AGG 0.514720 2.2:-13934559 MS.gene69834:CDS
AGGGTTTAAAGAAAGGGTTA+AGG 0.519357 2.2:-13934775 MS.gene69834:CDS
AAGGTATTGTTCATAGTGGA+TGG 0.520003 2.2:-13934749 MS.gene69834:CDS
TCGACCGTTTCAAACCCAAC+AGG 0.521695 2.2:+13934813 None:intergenic
GAAGTGGTTTCAGCACCAAA+TGG 0.527013 2.2:+13935509 None:intergenic
AATGTTTCCATGGTTTGCAA+TGG 0.527358 2.2:-13935696 MS.gene69834:CDS
TGGCTTGGAGGATTCAAGGA+TGG 0.527563 2.2:-13934951 MS.gene69834:CDS
GTCGAAGATGCTTTCCCAGA+AGG 0.530977 2.2:-13934795 MS.gene69834:CDS
AATGGAAGACCATCAATTTG+AGG 0.541291 2.2:+13935527 None:intergenic
TCGAAGATGCTTTCCCAGAA+GGG 0.541360 2.2:-13934794 MS.gene69834:CDS
CTAATACTAAGATTATGGGT+AGG 0.542356 2.2:-13934590 MS.gene69834:CDS
TAATACTAAGATTATGGGTA+GGG 0.548226 2.2:-13934589 MS.gene69834:CDS
TCAATTTGAGGAACATTGAG+AGG 0.562673 2.2:+13935539 None:intergenic
TCCACTCATCATGACAGCTA+TGG 0.562897 2.2:-13935465 MS.gene69834:CDS
AGAGAAAGAAACATCTGAAG+TGG 0.564919 2.2:+13935493 None:intergenic
GTTGGAGTTGAAGTGAAGAA+GGG 0.572282 2.2:-13934558 MS.gene69834:CDS
GGGGCAGGTTCATTGACAGA+GGG 0.573500 2.2:-13934669 MS.gene69834:CDS
AAAGGGTGTAGAGAAATTGA+AGG 0.575653 2.2:-13935080 MS.gene69834:CDS
TGAAGCTGTGAGAATTGTGA+TGG 0.583308 2.2:-13934499 MS.gene69834:CDS
GGTTGTTTCGTGACACATTG+CGG 0.584380 2.2:-13934690 MS.gene69834:CDS
CAATGAAGATGGTGAATCCA+TGG 0.597217 2.2:+13935727 None:intergenic
AGAAGATGGATTGTTCACTA+AGG 0.600678 2.2:-13934532 MS.gene69834:CDS
ATTGCTATGTGCAATGAAGA+TGG 0.606021 2.2:+13935716 None:intergenic
ACCGTTTCAAACCCAACAGG+AGG 0.610770 2.2:+13934816 None:intergenic
CAATTTGAGGAACATTGAGA+GGG 0.624619 2.2:+13935540 None:intergenic
AAGTGTCCCATTGCAAACCA+TGG 0.628477 2.2:+13935689 None:intergenic
ATATGATCACCATCTAAATG+TGG 0.645038 2.2:+13934615 None:intergenic
TCAAACAAATTAGCCAAAAG+GGG 0.645079 2.2:-13935647 MS.gene69834:CDS
AAGGGTGTAGAGAAATTGAA+GGG 0.647340 2.2:-13935079 MS.gene69834:CDS
TCCATAGCTGTCATGATGAG+TGG 0.650873 2.2:+13935464 None:intergenic
CGGGGCAGGTTCATTGACAG+AGG 0.655282 2.2:-13934670 MS.gene69834:CDS
TTGTTTCGTGACACATTGCG+GGG 0.655977 2.2:-13934688 MS.gene69834:CDS
GTGAGAAGAAGTTCAACTTG+AGG 0.659642 2.2:+13935431 None:intergenic
GCTCCATCAAGAATGAGTGA+AGG 0.680653 2.2:-13935284 MS.gene69834:CDS
GGGCAGGTTCATTGACAGAG+GGG 0.697167 2.2:-13934668 MS.gene69834:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTCATGATAATAAAGATTAA+AGG + chr2.2:13934891-13934910 None:intergenic 15.0%
!! AAAGATTAAAGGATGAAATA+GGG + chr2.2:13934880-13934899 None:intergenic 20.0%
!! AAATCAAAGAAAACAATTTC+AGG + chr2.2:13934698-13934717 None:intergenic 20.0%
!! AATCAAAGAAAACAATTTCA+GGG + chr2.2:13934697-13934716 None:intergenic 20.0%
!! ATCACTAATACTAAGATTAT+GGG - chr2.2:13935499-13935518 MS.gene69834:CDS 20.0%
!! TAAAGATTAAAGGATGAAAT+AGG + chr2.2:13934881-13934900 None:intergenic 20.0%
!! TATCACTAATACTAAGATTA+TGG - chr2.2:13935498-13935517 MS.gene69834:CDS 20.0%
!! TTGAAAAGAAAATTGGAATT+TGG - chr2.2:13934926-13934945 MS.gene69834:CDS 20.0%
!!! AAACTGTTTTAGATGAAAAA+TGG - chr2.2:13935113-13935132 MS.gene69834:CDS 20.0%
!!! AACTGTTTTAGATGAAAAAT+GGG - chr2.2:13935114-13935133 MS.gene69834:CDS 20.0%
!!! TTTTCATCTAAAACAGTTTT+AGG + chr2.2:13935112-13935131 None:intergenic 20.0%
! AAGTGATTAGATTTGGATAA+AGG + chr2.2:13934529-13934548 None:intergenic 25.0%
! GATTACATAGAACAAGAATT+TGG - chr2.2:13935046-13935065 MS.gene69834:CDS 25.0%
! TAATACTAAGATTATGGGTA+GGG - chr2.2:13935504-13935523 MS.gene69834:CDS 25.0%
! TGTTCTATGTAATCAACATA+AGG + chr2.2:13935040-13935059 None:intergenic 25.0%
! TTCTATGATAGGATCTATAA+TGG - chr2.2:13934962-13934981 MS.gene69834:CDS 25.0%
!! AGTTTCATGAATTGTTGTTA+GGG - chr2.2:13935215-13935234 MS.gene69834:CDS 25.0%
!!! ACTGTTTTAGATGAAAAATG+GGG - chr2.2:13935115-13935134 MS.gene69834:CDS 25.0%
!!! TTTTCTTTGATTTCACCTTT+TGG - chr2.2:13934705-13934724 MS.gene69834:CDS 25.0%
AAAAGCTTCGAGAATTAGTA+AGG - chr2.2:13935722-13935741 MS.gene69834:CDS 30.0%
AAAGAAAGGGTTAAGGAAAA+AGG - chr2.2:13935325-13935344 MS.gene69834:CDS 30.0%
AAGGTTGAATTGTTCTAACT+TGG + chr2.2:13934510-13934529 None:intergenic 30.0%
AGAAAATTGGAATTTGGAAG+TGG - chr2.2:13934932-13934951 MS.gene69834:CDS 30.0%
ATATGATCACCATCTAAATG+TGG + chr2.2:13935481-13935500 None:intergenic 30.0%
ATGGATGATGAAAATGAGAT+TGG - chr2.2:13935613-13935632 MS.gene69834:CDS 30.0%
CCAAATCTTGGTTTAATAAG+AGG + chr2.2:13935675-13935694 None:intergenic 30.0%
CCTCTTATTAAACCAAGATT+TGG - chr2.2:13935672-13935691 MS.gene69834:CDS 30.0%
CTAATACTAAGATTATGGGT+AGG - chr2.2:13935503-13935522 MS.gene69834:CDS 30.0%
CTCAAACAAATTAGCCAAAA+GGG - chr2.2:13934445-13934464 MS.gene69834:CDS 30.0%
GAAAATTGGAATTTGGAAGT+GGG - chr2.2:13934933-13934952 MS.gene69834:CDS 30.0%
GGGTAAAAAGTGATTAGATT+TGG + chr2.2:13934536-13934555 None:intergenic 30.0%
GGTTTAAGAATTGCCAAAAA+TGG + chr2.2:13935259-13935278 None:intergenic 30.0%
TAAGCTTAAGTGATGCAATT+GGG - chr2.2:13934987-13935006 MS.gene69834:CDS 30.0%
TCAAACAAATTAGCCAAAAG+GGG - chr2.2:13934446-13934465 MS.gene69834:CDS 30.0%
TCAGATGTTTCTTTCTCTTT+AGG - chr2.2:13934605-13934624 MS.gene69834:CDS 30.0%
TCTCAAACAAATTAGCCAAA+AGG - chr2.2:13934444-13934463 MS.gene69834:CDS 30.0%
TTAAGCTTAAGTGATGCAAT+TGG - chr2.2:13934986-13935005 MS.gene69834:CDS 30.0%
! CAGTTTCATGAATTGTTGTT+AGG - chr2.2:13935214-13935233 MS.gene69834:CDS 30.0%
! CCAATTTTCTTTTCAAAGCA+AGG + chr2.2:13934922-13934941 None:intergenic 30.0%
! GATACAGCAGCAATTAATTT+TGG - chr2.2:13935366-13935385 MS.gene69834:CDS 30.0%
! GTTAACAGGTTATCCATTTT+TGG - chr2.2:13935243-13935262 MS.gene69834:CDS 30.0%
! TCATTAGTTTATTGTGCACT+TGG - chr2.2:13935166-13935185 MS.gene69834:CDS 30.0%
!! CCTTGCTTTGAAAAGAAAAT+TGG - chr2.2:13934919-13934938 MS.gene69834:CDS 30.0%
!! GAAAAAGGTATTGTTCATAG+TGG - chr2.2:13935340-13935359 MS.gene69834:CDS 30.0%
!!! AACTTGGTTTGTGTTTTCTT+GGG + chr2.2:13934494-13934513 None:intergenic 30.0%
!!! GTGGGATTTTTTTCTATGAT+AGG - chr2.2:13934951-13934970 MS.gene69834:CDS 30.0%
!!! TAACTTGGTTTGTGTTTTCT+TGG + chr2.2:13934495-13934514 None:intergenic 30.0%
!!! TCATCTAAAACAGTTTTAGG+TGG + chr2.2:13935109-13935128 None:intergenic 30.0%
!!! TTTTGGCTAATTTGTTTGAG+AGG + chr2.2:13934445-13934464 None:intergenic 30.0%
AATGGAAGACCATCAATTTG+AGG + chr2.2:13934569-13934588 None:intergenic 35.0%
AGAGAAAGAAACATCTGAAG+TGG + chr2.2:13934603-13934622 None:intergenic 35.0%
AGGGTTTAAAGAAAGGGTTA+AGG - chr2.2:13935318-13935337 MS.gene69834:CDS 35.0%
ATCTTATGAAACCCCCAAAA+GGG - chr2.2:13934852-13934871 MS.gene69834:CDS 35.0%
ATTGCTATGTGCAATGAAGA+TGG + chr2.2:13934380-13934399 None:intergenic 35.0%
CAATTCTTAAACCTCCTGTT+GGG - chr2.2:13935266-13935285 MS.gene69834:CDS 35.0%
CAATTTGAGGAACATTGAGA+GGG + chr2.2:13934556-13934575 None:intergenic 35.0%
CATAGAATGACTCCAAATCT+TGG + chr2.2:13935687-13935706 None:intergenic 35.0%
CCAAAAATTGCTCACAGTTT+AGG - chr2.2:13934731-13934750 MS.gene69834:CDS 35.0%
CTCAATGTTCCTCAAATTGA+TGG - chr2.2:13934557-13934576 MS.gene69834:CDS 35.0%
GAATCAAGTCTTTGCAATAC+TGG - chr2.2:13934753-13934772 MS.gene69834:CDS 35.0%
GCATTATATGAAACTGTTGC+TGG + chr2.2:13934788-13934807 None:intergenic 35.0%
TAGATGAAAAATGGGGTTCT+TGG - chr2.2:13935122-13935141 MS.gene69834:CDS 35.0%
TCAATTTGAGGAACATTGAG+AGG + chr2.2:13934557-13934576 None:intergenic 35.0%
TTGGAGTCATTCTATGTTGA+TGG - chr2.2:13935691-13935710 MS.gene69834:CDS 35.0%
TTGTTTGAGAGGTGAAGATA+TGG + chr2.2:13934434-13934453 None:intergenic 35.0%
! AAAGGGTGTAGAGAAATTGA+AGG - chr2.2:13935013-13935032 MS.gene69834:CDS 35.0%
! AAGGGTGTAGAGAAATTGAA+GGG - chr2.2:13935014-13935033 MS.gene69834:CDS 35.0%
! AATGTTTCCATGGTTTGCAA+TGG - chr2.2:13934397-13934416 MS.gene69834:CDS 35.0%
! ATGAAATAGGGAACCCTTTT+GGG + chr2.2:13934868-13934887 None:intergenic 35.0%
! ATGTTTCCATGGTTTGCAAT+GGG - chr2.2:13934398-13934417 MS.gene69834:CDS 35.0%
! CAAATTGATGGTCTTCCATT+TGG - chr2.2:13934569-13934588 MS.gene69834:CDS 35.0%
! CCTAAACTGTGAGCAATTTT+TGG + chr2.2:13934734-13934753 None:intergenic 35.0%
!! AAGGTATTGTTCATAGTGGA+TGG - chr2.2:13935344-13935363 MS.gene69834:CDS 35.0%
!! AGAAGATGGATTGTTCACTA+AGG - chr2.2:13935561-13935580 MS.gene69834:CDS 35.0%
!!! AAAACAGTTTTAGGTGGTTC+AGG + chr2.2:13935103-13935122 None:intergenic 35.0%
!!! AGCAATTTTTGGCAACCAAA+AGG + chr2.2:13934723-13934742 None:intergenic 35.0%
!!! ATTTTGGAACATTCGTCTGT+TGG - chr2.2:13935382-13935401 MS.gene69834:CDS 35.0%
ACCCTTTCTTTAAACCCTTC+TGG + chr2.2:13935316-13935335 None:intergenic 40.0%
AGTGATGCAATTGGGTTCAA+AGG - chr2.2:13934995-13935014 MS.gene69834:CDS 40.0%
ATGAGATTGGCAGAGAAGTT+AGG - chr2.2:13935626-13935645 MS.gene69834:CDS 40.0%
CCCAGAAGGGTTTAAAGAAA+GGG - chr2.2:13935312-13935331 MS.gene69834:CDS 40.0%
CCCTTTCTTTAAACCCTTCT+GGG + chr2.2:13935315-13935334 None:intergenic 40.0%
GATCTTATGAAACCCCCAAA+AGG - chr2.2:13934851-13934870 MS.gene69834:CDS 40.0%
GATTATGGGTAGGGAATTGA+AGG - chr2.2:13935513-13935532 MS.gene69834:CDS 40.0%
GCAATTCTTAAACCTCCTGT+TGG - chr2.2:13935265-13935284 MS.gene69834:CDS 40.0%
GTACCTTCACTCATTCTTGA+TGG + chr2.2:13934815-13934834 None:intergenic 40.0%
GTGAGAAGAAGTTCAACTTG+AGG + chr2.2:13934665-13934684 None:intergenic 40.0%
GTGATGCAATTGGGTTCAAA+GGG - chr2.2:13934996-13935015 MS.gene69834:CDS 40.0%
GTTGGAGTTGAAGTGAAGAA+GGG - chr2.2:13935535-13935554 MS.gene69834:CDS 40.0%
TCCCAGAAGGGTTTAAAGAA+AGG - chr2.2:13935311-13935330 MS.gene69834:CDS 40.0%
TGAAGCTGTGAGAATTGTGA+TGG - chr2.2:13935594-13935613 MS.gene69834:CDS 40.0%
TGCACATAGCAATGTTTCCA+TGG - chr2.2:13934387-13934406 MS.gene69834:CDS 40.0%
TGGTAAGCCTGTTCTTCTTT+CGG - chr2.2:13935066-13935085 MS.gene69834:CDS 40.0%
TTAGGTGGTTCAGGTAAAAC+AGG + chr2.2:13935094-13935113 None:intergenic 40.0%
TTGTTAGGGCTTGAGTTAAC+AGG - chr2.2:13935229-13935248 MS.gene69834:CDS 40.0%
! AGAGATTTTGTGTCCCCTTT+TGG + chr2.2:13934462-13934481 None:intergenic 40.0%
! GATGAAATAGGGAACCCTTT+TGG + chr2.2:13934869-13934888 None:intergenic 40.0%
! GTGTTGATGCCACATTTAGA+TGG - chr2.2:13935469-13935488 MS.gene69834:CDS 40.0%
! TGAAATAGGGAACCCTTTTG+GGG + chr2.2:13934867-13934886 None:intergenic 40.0%
AAGTGTCCCATTGCAAACCA+TGG + chr2.2:13934407-13934426 None:intergenic 45.0%
ACCTCCTGTTGGGTTTGAAA+CGG - chr2.2:13935276-13935295 MS.gene69834:CDS 45.0%
ATGGGTAGGGAATTGAAGGT+TGG - chr2.2:13935517-13935536 MS.gene69834:CDS 45.0%
GAAAAATGGGGTTCTTGGCT+TGG - chr2.2:13935127-13935146 MS.gene69834:CDS 45.0%
GAAGTGGTTTCAGCACCAAA+TGG + chr2.2:13934587-13934606 None:intergenic 45.0%
GCTCCATCAAGAATGAGTGA+AGG - chr2.2:13934809-13934828 MS.gene69834:CDS 45.0%
GGTAAGCCTGTTCTTCTTTC+GGG - chr2.2:13935067-13935086 MS.gene69834:CDS 45.0%
GGTTGGAGTTGAAGTGAAGA+AGG - chr2.2:13935534-13935553 MS.gene69834:CDS 45.0%
GTGAAGAAGGGTGAAGAAGA+TGG - chr2.2:13935547-13935566 MS.gene69834:CDS 45.0%
TCCACTCATCATGACAGCTA+TGG - chr2.2:13934628-13934647 MS.gene69834:CDS 45.0%
TCCATAGCTGTCATGATGAG+TGG + chr2.2:13934632-13934651 None:intergenic 45.0%
TCGAAGATGCTTTCCCAGAA+GGG - chr2.2:13935299-13935318 MS.gene69834:CDS 45.0%
TTGTTTCGTGACACATTGCG+GGG - chr2.2:13935405-13935424 MS.gene69834:CDS 45.0%
! GAAATAGGGAACCCTTTTGG+GGG + chr2.2:13934866-13934885 None:intergenic 45.0%
! GGTTGTTTCGTGACACATTG+CGG - chr2.2:13935403-13935422 MS.gene69834:CDS 45.0%
! GTTGTTTCGTGACACATTGC+GGG - chr2.2:13935404-13935423 MS.gene69834:CDS 45.0%
!! TTCTTGGCTTGGAGGATTCA+AGG - chr2.2:13935138-13935157 MS.gene69834:CDS 45.0%
ACAGGTCCCGAAAGAAGAAC+AGG + chr2.2:13935076-13935095 None:intergenic 50.0%
ACCGTTTCAAACCCAACAGG+AGG + chr2.2:13935280-13935299 None:intergenic 50.0%
GTCGAAGATGCTTTCCCAGA+AGG - chr2.2:13935298-13935317 MS.gene69834:CDS 50.0%
TCGACCGTTTCAAACCCAAC+AGG + chr2.2:13935283-13935302 None:intergenic 50.0%
! TGGCTTGGAGGATTCAAGGA+TGG - chr2.2:13935142-13935161 MS.gene69834:CDS 50.0%
!! AAATGGGGTTCTTGGCTTGG+AGG - chr2.2:13935130-13935149 MS.gene69834:CDS 50.0%
GGGCAGGTTCATTGACAGAG+GGG - chr2.2:13935425-13935444 MS.gene69834:CDS 55.0%
GGGGCAGGTTCATTGACAGA+GGG - chr2.2:13935424-13935443 MS.gene69834:CDS 55.0%
CGGGGCAGGTTCATTGACAG+AGG - chr2.2:13935423-13935442 MS.gene69834:CDS 60.0%
TTCGTGACACATTGCGGGGC+AGG - chr2.2:13935409-13935428 MS.gene69834:CDS 60.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 13934368 13935747 13934368 ID=MS.gene69834
chr2.2 mRNA 13934368 13935747 13934368 ID=MS.gene69834.t1;Parent=MS.gene69834
chr2.2 exon 13934368 13935747 13934368 ID=MS.gene69834.t1.exon1;Parent=MS.gene69834.t1
chr2.2 CDS 13934368 13935747 13934368 ID=cds.MS.gene69834.t1;Parent=MS.gene69834.t1
Gene Sequence

>MS.gene69834

ATGGATTCACCATCTTCATTGCACATAGCAATGTTTCCATGGTTTGCAATGGGACACTTAACTCCATATCTTCACCTCTCAAACAAATTAGCCAAAAGGGGACACAAAATCTCTTTCTTCATTCCCAAGAAAACACAAACCAAGTTAGAACAATTCAACCTTTATCCAAATCTAATCACTTTTTACCCTCTCAATGTTCCTCAAATTGATGGTCTTCCATTTGGTGCTGAAACCACTTCAGATGTTTCTTTCTCTTTAGGTCCACTCATCATGACAGCTATGGATCAAACACAGCCTCAAGTTGAACTTCTTCTCACTCAATTAAACCCTGAAATTGTTTTCTTTGATTTCACCTTTTGGTTGCCAAAAATTGCTCACAGTTTAGGAATCAAGTCTTTGCAATACTGGATTGTTAGTCCAGCAACAGTTTCATATAATGCAGCTCCATCAAGAATGAGTGAAGGTACAAACTTGACTGAATTTGATCTTATGAAACCCCCAAAAGGGTTCCCTATTTCATCCTTTAATCTTTATTATCATGAAGCAAAGCACCTTGCTTTGAAAAGAAAATTGGAATTTGGAAGTGGGATTTTTTTCTATGATAGGATCTATAATGGTTTAAGCTTAAGTGATGCAATTGGGTTCAAAGGGTGTAGAGAAATTGAAGGGCCTTATGTTGATTACATAGAACAAGAATTTGGTAAGCCTGTTCTTCTTTCGGGACCTGTTTTACCTGAACCACCTAAAACTGTTTTAGATGAAAAATGGGGTTCTTGGCTTGGAGGATTCAAGGATGGTTCATTAGTTTATTGTGCACTTGGAAGTGAATCTAAATTATCACAAAAGCAGTTTCATGAATTGTTGTTAGGGCTTGAGTTAACAGGTTATCCATTTTTGGCAATTCTTAAACCTCCTGTTGGGTTTGAAACGGTCGAAGATGCTTTCCCAGAAGGGTTTAAAGAAAGGGTTAAGGAAAAAGGTATTGTTCATAGTGGATGGATACAGCAGCAATTAATTTTGGAACATTCGTCTGTTGGTTGTTTCGTGACACATTGCGGGGCAGGTTCATTGACAGAGGGGTTGATAAATAATTGTCAGATCGTGTTGATGCCACATTTAGATGGTGATCATATCACTAATACTAAGATTATGGGTAGGGAATTGAAGGTTGGAGTTGAAGTGAAGAAGGGTGAAGAAGATGGATTGTTCACTAAGGAAAGTGTTTCTGAAGCTGTGAGAATTGTGATGGATGATGAAAATGAGATTGGCAGAGAAGTTAGGAGTAATCATGATAAACTGAGAAACCTCTTATTAAACCAAGATTTGGAGTCATTCTATGTTGATGGTTTCTGTGAAAAGCTTCGAGAATTAGTAAGGTGA
Protein sequence

>MS.gene69834.t1

MDSPSSLHIAMFPWFAMGHLTPYLHLSNKLAKRGHKISFFIPKKTQTKLEQFNLYPNLITFYPLNVPQIDGLPFGAETTSDVSFSLGPLIMTAMDQTQPQVELLLTQLNPEIVFFDFTFWLPKIAHSLGIKSLQYWIVSPATVSYNAAPSRMSEGTNLTEFDLMKPPKGFPISSFNLYYHEAKHLALKRKLEFGSGIFFYDRIYNGLSLSDAIGFKGCREIEGPYVDYIEQEFGKPVLLSGPVLPEPPKTVLDEKWGSWLGGFKDGSLVYCALGSESKLSQKQFHELLLGLELTGYPFLAILKPPVGFETVEDAFPEGFKERVKEKGIVHSGWIQQQLILEHSSVGCFVTHCGAGSLTEGLINNCQIVLMPHLDGDHITNTKIMGRELKVGVEVKKGEEDGLFTKESVSEAVRIVMDDENEIGREVRSNHDKLRNLLLNQDLESFYVDGFCEKLRELVR