AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene065244


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene065244.t1 MTR_2g083480 78.775 457 83 1 1 443 1 457 0.0 733
MS.gene065244.t1 MTR_2g083420 76.201 458 71 2 1 444 1 434 0.0 721
MS.gene065244.t1 MTR_2g083390 76.253 459 71 2 1 445 1 435 0.0 721
MS.gene065244.t1 MTR_2g083430 77.753 454 87 1 5 444 5 458 0.0 701
MS.gene065244.t1 MTR_2g083380 65.502 458 144 2 1 444 18 475 0.0 600
MS.gene065244.t1 MTR_2g083490 64.270 459 150 1 1 445 1 459 0.0 599
MS.gene065244.t1 MTR_4g079270 57.826 460 176 4 1 444 1 458 0.0 550
MS.gene065244.t1 MTR_4g079250 58.261 460 174 5 1 444 1 458 0.0 550
MS.gene065244.t1 MTR_2g014900 56.319 451 182 2 8 444 7 456 0.0 522
MS.gene065244.t1 MTR_2g083360 62.252 453 52 6 6 444 27 374 0.0 521
MS.gene065244.t1 MTR_2g086283 54.042 433 101 4 11 443 1 335 1.93e-152 436
MS.gene065244.t1 MTR_1g090270 38.877 463 245 11 7 443 14 464 6.83e-106 322
MS.gene065244.t1 MTR_4g059370 39.672 305 165 7 148 443 97 391 1.36e-72 234
MS.gene065244.t1 MTR_7g067330 33.481 451 262 13 2 441 3 426 2.19e-68 224
MS.gene065244.t1 MTR_7g067120 34.071 452 258 14 2 441 3 426 3.66e-67 221
MS.gene065244.t1 MTR_8g068330 30.769 468 290 13 1 441 1 461 5.03e-66 219
MS.gene065244.t1 MTR_8g068360 32.735 446 256 14 7 419 11 445 2.27e-63 212
MS.gene065244.t1 MTR_2g083440 94.175 103 6 0 343 445 11 113 3.63e-62 197
MS.gene065244.t1 MTR_4g123553 31.209 455 285 13 6 441 13 458 3.99e-62 209
MS.gene065244.t1 MTR_8g068340 30.435 460 290 11 7 441 11 465 8.38e-62 207
MS.gene065244.t1 MTR_2g008226 32.627 472 272 18 6 442 8 468 5.89e-60 203
MS.gene065244.t1 MTR_6g036650 30.380 474 281 14 1 441 11 468 3.29e-58 198
MS.gene065244.t1 MTR_2g008225 30.087 462 292 11 2 440 9 462 6.02e-58 197
MS.gene065244.t1 MTR_2g014930 41.667 276 93 6 17 291 9 217 1.44e-57 189
MS.gene065244.t1 MTR_6g042310 31.223 458 279 14 7 441 17 461 2.19e-57 196
MS.gene065244.t1 MTR_2g008220 31.250 464 284 14 2 440 8 461 5.70e-57 195
MS.gene065244.t1 MTR_2g046620 30.110 455 290 14 6 441 14 459 1.95e-53 186
MS.gene065244.t1 MTR_4g079280 42.326 215 91 2 11 224 1 183 3.34e-53 176
MS.gene065244.t1 MTR_5g066410 30.065 459 281 12 11 445 1 443 4.41e-47 168
MS.gene065244.t1 MTR_8g007650 30.252 476 281 14 7 445 6 467 2.40e-46 167
MS.gene065244.t1 MTR_8g007565 30.042 476 282 14 7 445 6 467 2.78e-46 166
MS.gene065244.t1 MTR_4g077960 28.571 448 284 16 17 441 1 435 2.93e-45 163
MS.gene065244.t1 MTR_3g435310 27.991 443 271 14 6 441 16 417 1.06e-44 161
MS.gene065244.t1 MTR_1g090280 39.423 208 114 5 247 443 108 314 3.78e-43 154
MS.gene065244.t1 MTR_8g071070 27.505 469 303 14 8 443 7 471 1.11e-35 137
MS.gene065244.t1 MTR_5g087620 26.195 481 280 15 8 429 10 474 2.70e-33 131
MS.gene065244.t1 MTR_8g066610 26.653 484 303 16 6 445 7 482 3.55e-33 130
MS.gene065244.t1 MTR_0009s0240 25.054 459 317 13 8 443 7 461 2.62e-32 128
MS.gene065244.t1 MTR_4g031800 26.327 490 288 19 6 445 7 473 1.72e-30 123
MS.gene065244.t1 MTR_8g465670 26.623 462 266 18 9 420 8 446 1.18e-29 120
MS.gene065244.t1 MTR_4g485590 27.820 399 236 12 8 380 9 381 1.27e-29 119
MS.gene065244.t1 MTR_2g098430 23.965 459 292 13 9 423 7 452 2.56e-29 120
MS.gene065244.t1 MTR_8g009055 28.384 458 266 19 7 421 5 443 2.65e-29 119
MS.gene065244.t1 MTR_8g009073 27.615 478 283 22 7 443 5 460 4.94e-28 116
MS.gene065244.t1 MTR_8g009050 27.637 474 249 19 7 421 5 443 6.28e-28 115
MS.gene065244.t1 MTR_6g023665 26.754 456 260 18 9 414 14 445 7.90e-28 115
MS.gene065244.t1 MTR_8g006220 25.957 470 267 17 9 420 7 453 3.29e-27 114
MS.gene065244.t1 MTR_8g008990 28.603 458 267 19 7 421 5 445 9.35e-27 112
MS.gene065244.t1 MTR_1g062380 25.591 465 274 20 7 411 15 467 9.77e-27 112
MS.gene065244.t1 MTR_8g027885 27.273 484 270 20 5 438 16 467 1.43e-26 112
MS.gene065244.t1 MTR_6g033615 26.846 447 255 17 9 414 5 420 2.22e-26 111
MS.gene065244.t1 MTR_5g045970 25.720 486 308 17 7 445 15 494 2.52e-26 111
MS.gene065244.t1 MTR_8g027870 27.273 484 270 20 5 438 16 467 2.67e-26 111
MS.gene065244.t1 MTR_3g009510 33.333 210 121 4 222 415 241 447 8.16e-26 109
MS.gene065244.t1 MTR_8g009073 31.408 277 168 9 160 421 43 312 1.05e-25 107
MS.gene065244.t1 MTR_6g033625 26.351 444 275 17 9 414 5 434 2.09e-25 108
MS.gene065244.t1 MTR_6g488280 34.615 182 106 3 245 414 258 438 2.24e-25 108
MS.gene065244.t1 MTR_0428s0010 34.615 182 106 3 245 414 258 438 2.24e-25 108
MS.gene065244.t1 MTR_4g485620 25.536 466 300 15 20 445 1 459 2.48e-25 108
MS.gene065244.t1 MTR_0184s0030 34.112 214 121 6 223 420 234 443 3.98e-25 107
MS.gene065244.t1 MTR_4g485630 24.605 443 305 12 7 422 8 448 5.19e-25 107
MS.gene065244.t1 MTR_4g117980 24.313 473 284 18 1 419 4 456 5.43e-25 107
MS.gene065244.t1 MTR_7g117170 34.921 189 107 5 245 421 268 452 2.03e-24 105
MS.gene065244.t1 MTR_6g038220 25.322 466 270 18 8 434 11 437 2.63e-24 105
MS.gene065244.t1 MTR_7g070740 24.945 457 291 14 7 419 10 458 2.78e-24 105
MS.gene065244.t1 MTR_7g102460 25.581 473 281 20 5 422 6 462 3.08e-24 105
MS.gene065244.t1 MTR_0078s0060 28.947 266 158 9 170 422 195 442 3.81e-24 104
MS.gene065244.t1 MTR_7g013220 25.714 455 288 20 8 431 5 440 4.37e-24 104
MS.gene065244.t1 MTR_5g098930 23.444 482 307 13 7 442 4 469 4.64e-24 104
MS.gene065244.t1 MTR_8g012635 33.493 209 118 5 222 414 242 445 5.59e-24 104
MS.gene065244.t1 MTR_8g012730 33.484 221 128 5 214 418 69 286 5.90e-24 102
MS.gene065244.t1 MTR_8g009063 26.709 468 260 17 7 422 12 448 7.56e-24 103
MS.gene065244.t1 MTR_1g107350 25.870 460 287 17 1 421 1 445 7.92e-24 103
MS.gene065244.t1 MTR_2g046820 33.043 230 140 6 222 440 236 462 8.36e-24 103
MS.gene065244.t1 MTR_8g009067 30.943 265 152 8 170 421 77 323 8.80e-24 102
MS.gene065244.t1 MTR_8g009067 30.943 265 152 8 170 421 195 441 1.20e-23 103
MS.gene065244.t1 MTR_5g035560 24.948 481 279 21 7 442 10 453 1.29e-23 103
MS.gene065244.t1 MTR_8g006260 29.924 264 160 10 170 422 198 447 1.41e-23 103
MS.gene065244.t1 MTR_5g035580 33.173 208 127 6 238 444 257 453 1.96e-23 102
MS.gene065244.t1 MTR_1g019520 31.797 217 129 5 244 445 5 217 2.31e-23 98.2
MS.gene065244.t1 MTR_6g005600 28.904 301 173 9 154 439 179 453 2.62e-23 102
MS.gene065244.t1 MTR_8g083280 33.047 233 120 9 227 435 249 469 3.19e-23 102
MS.gene065244.t1 MTR_8g074550 23.457 486 284 19 1 420 1 464 3.30e-23 102
MS.gene065244.t1 MTR_7g013200 25.581 430 275 15 8 413 5 413 3.63e-23 101
MS.gene065244.t1 MTR_6g038200 24.541 436 280 16 8 415 11 425 5.44e-23 101
MS.gene065244.t1 MTR_7g013180 25.882 425 272 14 8 405 5 413 7.71e-23 100
MS.gene065244.t1 MTR_8g006730 35.165 182 105 4 245 414 260 440 9.70e-23 100
MS.gene065244.t1 MTR_6g038230 25.000 452 290 16 8 434 11 438 9.91e-23 100
MS.gene065244.t1 MTR_7g070660 23.060 464 312 15 7 430 10 468 1.49e-22 100
MS.gene065244.t1 MTR_0184s0040 31.915 188 114 5 245 422 275 458 1.68e-22 100
MS.gene065244.t1 MTR_0078s0190 31.915 188 114 5 245 422 275 458 1.68e-22 100
MS.gene065244.t1 MTR_7g102560 25.974 462 286 17 5 419 6 458 1.69e-22 100
MS.gene065244.t1 MTR_8g012650 29.707 239 147 5 222 444 242 475 1.74e-22 100
MS.gene065244.t1 MTR_8g006710 32.967 182 109 3 245 414 259 439 1.78e-22 99.8
MS.gene065244.t1 MTR_8g006270 27.273 275 170 8 153 413 178 436 3.85e-22 99.0
MS.gene065244.t1 MTR_8g012630 33.871 186 105 5 245 414 206 389 4.37e-22 98.2
MS.gene065244.t1 MTR_8g466240 31.343 201 121 6 198 384 202 399 4.52e-22 98.6
MS.gene065244.t1 MTR_2g046750 33.043 230 140 6 222 440 239 465 5.37e-22 98.6
MS.gene065244.t1 MTR_7g102490 34.896 192 112 6 239 419 272 461 5.52e-22 98.6
MS.gene065244.t1 MTR_7g102520 26.522 460 287 17 7 422 11 463 5.78e-22 98.6
MS.gene065244.t1 MTR_0078s0010 34.225 187 109 5 245 421 260 442 7.24e-22 98.2
MS.gene065244.t1 MTR_4g082820 27.123 424 256 15 7 387 6 419 8.80e-22 97.8
MS.gene065244.t1 MTR_7g117405 25.800 469 281 20 2 422 9 458 9.36e-22 97.8
MS.gene065244.t1 MTR_4g024020 24.893 466 294 18 3 419 4 462 1.02e-21 97.8
MS.gene065244.t1 MTR_3g049970 26.201 458 278 18 6 421 7 446 1.04e-21 97.8
MS.gene065244.t1 MTR_3g079480 25.202 496 287 23 8 445 21 490 1.05e-21 97.8
MS.gene065244.t1 MTR_4g485640 26.376 436 264 19 18 414 219 636 1.13e-21 98.2
MS.gene065244.t1 MTR_5g098960 26.201 458 252 22 1 412 1 418 1.15e-21 97.4
MS.gene065244.t1 MTR_2g040530 31.553 206 129 4 245 440 261 464 1.25e-21 97.4
MS.gene065244.t1 MTR_7g055710 23.333 450 295 13 7 413 10 452 1.34e-21 97.4
MS.gene065244.t1 MTR_7g102550 24.116 481 305 18 8 438 9 479 2.96e-21 96.3
MS.gene065244.t1 MTR_7g046490 33.862 189 109 5 244 420 255 439 3.25e-21 96.3
MS.gene065244.t1 MTR_6g033725 33.333 174 110 4 244 415 263 432 4.61e-21 95.9
MS.gene065244.t1 MTR_4g117950 25.333 450 288 16 6 421 4 439 5.50e-21 95.5
MS.gene065244.t1 MTR_3g479520 23.625 491 301 19 8 445 15 484 7.37e-21 95.1
MS.gene065244.t1 MTR_4g082810 28.708 418 242 15 7 383 6 408 1.06e-20 94.0
MS.gene065244.t1 MTR_7g047030 33.155 187 111 5 245 421 260 442 1.06e-20 94.7
MS.gene065244.t1 MTR_7g047270 33.155 187 111 5 245 421 260 442 1.06e-20 94.7
MS.gene065244.t1 MTR_0536s0010 25.277 451 292 18 3 421 16 453 1.21e-20 94.7
MS.gene065244.t1 MTR_2g034990 23.725 451 293 15 1 408 4 446 1.24e-20 94.7
MS.gene065244.t1 MTR_2g059240 24.460 417 263 12 5 383 10 412 1.32e-20 94.4
MS.gene065244.t1 MTR_1g019510 29.954 217 133 5 244 445 256 468 1.37e-20 94.4
MS.gene065244.t1 MTR_8g064880 25.676 444 251 20 6 396 7 424 1.43e-20 94.4
MS.gene065244.t1 MTR_7g071040 23.251 443 292 14 7 413 16 446 1.79e-20 94.4
MS.gene065244.t1 MTR_8g077590 31.034 203 127 4 223 414 240 440 1.86e-20 94.0
MS.gene065244.t1 MTR_7g070910 23.144 458 299 16 7 419 10 459 1.91e-20 94.0
MS.gene065244.t1 MTR_3g069690 32.065 184 116 5 239 421 251 426 2.49e-20 93.6
MS.gene065244.t1 MTR_5g019580 30.418 263 154 7 169 413 222 473 3.05e-20 93.6
MS.gene065244.t1 MTR_5g019580 30.418 263 154 7 169 413 198 449 3.27e-20 93.2
MS.gene065244.t1 MTR_8g083290 32.961 179 113 5 245 422 269 441 3.41e-20 93.2
MS.gene065244.t1 MTR_5g090610 29.694 229 138 6 217 424 218 444 3.97e-20 92.8
MS.gene065244.t1 MTR_6g038240 31.579 171 106 6 245 415 266 425 4.04e-20 92.8
MS.gene065244.t1 MTR_8g008970 26.115 471 258 19 7 421 5 441 4.05e-20 93.6
MS.gene065244.t1 MTR_8g008970 33.333 180 106 5 244 422 597 763 5.31e-17 84.0
MS.gene065244.t1 MTR_7g070610 22.271 458 291 15 7 413 12 455 5.42e-20 92.8
MS.gene065244.t1 MTR_3g084540 31.771 192 118 5 245 429 272 457 5.52e-20 92.4
MS.gene065244.t1 MTR_7g070940 23.270 477 317 17 7 443 8 475 6.16e-20 92.4
MS.gene065244.t1 MTR_5g090660 28.185 259 149 8 201 424 200 456 6.59e-20 92.8
MS.gene065244.t1 MTR_3g009490 33.750 160 90 4 269 415 3 159 6.72e-20 87.8
MS.gene065244.t1 MTR_6g038300 25.282 443 269 17 8 415 11 426 6.91e-20 92.0
MS.gene065244.t1 MTR_5g090700 30.804 224 132 7 222 424 239 460 7.72e-20 92.0
MS.gene065244.t1 MTR_7g102450 24.508 457 285 18 8 422 11 449 7.86e-20 92.0
MS.gene065244.t1 MTR_0891s0010 26.645 304 181 11 171 445 1 291 8.42e-20 89.7
MS.gene065244.t1 MTR_1g107315 25.587 426 273 15 8 398 8 424 9.83e-20 91.7
MS.gene065244.t1 MTR_6g035185 22.930 471 294 17 1 419 4 457 9.89e-20 92.0
MS.gene065244.t1 MTR_2g035020 23.894 452 291 18 1 408 4 446 1.11e-19 91.7
MS.gene065244.t1 MTR_7g070810 24.330 448 293 14 7 414 8 449 1.12e-19 91.7
MS.gene065244.t1 MTR_7g013240 33.140 172 106 6 245 414 252 416 1.53e-19 90.9
MS.gene065244.t1 MTR_7g070930 23.312 459 297 16 7 419 13 462 1.72e-19 91.3
MS.gene065244.t1 MTR_5g090670 25.568 352 201 11 110 424 133 460 1.77e-19 90.9
MS.gene065244.t1 MTR_3g084520 32.584 178 107 5 245 415 272 443 1.81e-19 90.9
MS.gene065244.t1 MTR_5g045960 25.428 409 266 15 7 380 8 412 1.83e-19 90.9
MS.gene065244.t1 MTR_7g013260 25.714 420 270 19 8 404 6 406 1.99e-19 90.5
MS.gene065244.t1 MTR_6g033675 28.452 239 153 8 189 414 201 434 2.05e-19 90.9
MS.gene065244.t1 MTR_3g084530 33.146 178 106 5 245 415 272 443 3.07e-19 90.1
MS.gene065244.t1 MTR_8g012745 32.057 209 120 8 223 413 237 441 3.11e-19 90.1
MS.gene065244.t1 MTR_5g067170 31.579 190 114 5 244 419 267 454 3.34e-19 90.1
MS.gene065244.t1 MTR_6g035265 23.355 471 283 19 1 419 4 448 3.51e-19 90.1
MS.gene065244.t1 MTR_4g128720 25.000 428 282 16 7 411 14 425 4.81e-19 89.7
MS.gene065244.t1 MTR_5g090630 28.295 258 148 8 202 424 194 449 6.12e-19 89.4
MS.gene065244.t1 MTR_1g107360 25.111 450 285 15 6 421 7 438 6.50e-19 89.4
MS.gene065244.t1 MTR_4g117890 24.603 504 276 22 7 442 12 479 6.90e-19 89.4
MS.gene065244.t1 MTR_3g069710 31.518 257 161 9 196 443 204 454 7.45e-19 89.0
MS.gene065244.t1 MTR_3g479610 29.126 206 128 6 245 445 122 314 7.81e-19 87.4
MS.gene065244.t1 MTR_4g094920 28.713 202 135 6 245 440 281 479 1.03e-18 89.0
MS.gene065244.t1 MTR_7g070800 22.319 457 308 13 3 419 1 450 1.07e-18 88.6
MS.gene065244.t1 MTR_8g088560 30.769 208 132 7 238 441 259 458 1.07e-18 88.6
MS.gene065244.t1 MTR_6g033660 31.977 172 111 4 245 414 266 433 1.11e-18 88.6
MS.gene065244.t1 MTR_7g070780 22.609 460 300 14 6 419 9 458 1.21e-18 88.6
MS.gene065244.t1 MTR_0536s0020 23.414 457 270 17 7 410 17 446 1.39e-18 88.2
MS.gene065244.t1 MTR_1g107380 30.870 230 133 10 206 420 230 448 1.41e-18 88.2
MS.gene065244.t1 MTR_5g090620 26.641 259 151 7 203 424 203 459 1.82e-18 87.8
MS.gene065244.t1 MTR_4g117960 23.093 472 290 16 1 419 4 455 1.85e-18 87.8
MS.gene065244.t1 MTR_5g070040 30.072 276 164 12 152 414 184 443 1.94e-18 87.8
MS.gene065244.t1 MTR_4g095008 29.121 182 120 6 245 422 266 442 3.13e-18 87.4
MS.gene065244.t1 MTR_8g044140 23.873 377 243 12 64 402 37 407 1.01e-17 85.5
MS.gene065244.t1 MTR_5g058320 23.861 461 281 17 5 421 7 441 1.08e-17 85.5
MS.gene065244.t1 MTR_6g014220 24.459 462 284 16 8 421 10 454 1.36e-17 85.1
MS.gene065244.t1 MTR_6g014170 24.512 461 291 16 8 432 10 449 1.58e-17 85.1
MS.gene065244.t1 MTR_5g090580 25.806 279 166 8 201 444 202 474 1.66e-17 85.1
MS.gene065244.t1 MTR_6g013900 31.892 185 112 6 239 421 283 455 1.68e-17 85.1
MS.gene065244.t1 MTR_8g059425 27.755 245 141 11 196 421 227 454 1.79e-17 85.1
MS.gene065244.t1 MTR_7g080935 30.220 182 116 5 239 420 258 428 1.95e-17 84.7
MS.gene065244.t1 MTR_7g080940 30.220 182 116 5 239 420 258 428 2.68e-17 84.3
MS.gene065244.t1 MTR_6g014250 24.026 462 288 17 8 422 10 455 2.85e-17 84.3
MS.gene065244.t1 MTR_4g008630 26.378 254 169 7 185 423 191 441 3.14e-17 84.0
MS.gene065244.t1 MTR_6g014020 31.892 185 112 6 239 421 284 456 4.05e-17 84.0
MS.gene065244.t1 MTR_3g479490 29.379 177 116 4 245 421 283 450 4.64e-17 83.6
MS.gene065244.t1 MTR_4g128690 30.864 243 150 9 196 434 216 444 5.18e-17 83.2
MS.gene065244.t1 MTR_8g064870 23.932 468 278 17 6 421 9 450 5.40e-17 83.6
MS.gene065244.t1 MTR_5g029800 29.231 195 113 5 244 414 265 458 5.61e-17 83.6
MS.gene065244.t1 MTR_7g080950 30.769 182 115 6 239 420 253 423 6.82e-17 83.2
MS.gene065244.t1 MTR_4g118000 24.146 439 269 18 6 412 10 416 7.57e-17 82.8
MS.gene065244.t1 MTR_0288s0020 29.870 231 134 8 196 421 230 437 7.58e-17 82.8
MS.gene065244.t1 MTR_5g027210 24.291 247 154 3 198 412 212 457 8.17e-17 82.8
MS.gene065244.t1 MTR_6g013990 28.962 183 120 5 239 421 282 454 8.66e-17 82.8
MS.gene065244.t1 MTR_1g032490 24.826 431 277 16 2 396 4 423 1.31e-16 82.4
MS.gene065244.t1 MTR_6g014270 22.532 466 292 16 8 421 7 455 1.40e-16 82.0
MS.gene065244.t1 MTR_2g035040 29.050 179 112 4 244 408 174 351 1.98e-16 81.3
MS.gene065244.t1 MTR_7g071050 24.027 437 274 16 7 419 12 414 2.07e-16 81.3
MS.gene065244.t1 MTR_5g090600 25.651 269 160 9 202 444 199 453 2.11e-16 81.6
MS.gene065244.t1 MTR_7g012120 29.213 178 111 4 245 408 272 448 2.25e-16 81.6
MS.gene065244.t1 MTR_6g014190 30.102 196 123 6 239 432 91 274 2.34e-16 79.7
MS.gene065244.t1 MTR_5g016480 27.363 201 140 5 245 442 275 472 2.37e-16 81.6
MS.gene065244.t1 MTR_3g031400 26.549 226 140 5 206 420 215 425 3.02e-16 81.3
MS.gene065244.t1 MTR_6g011340 28.099 242 144 10 196 421 229 456 3.02e-16 81.3
MS.gene065244.t1 MTR_1g107375 30.964 197 122 6 226 421 247 430 3.06e-16 80.9
MS.gene065244.t1 MTR_7g011470 30.811 185 114 6 239 421 266 438 3.38e-16 80.9
MS.gene065244.t1 MTR_7g011470 30.811 185 114 6 239 421 270 442 3.49e-16 80.9
MS.gene065244.t1 MTR_8g032950 23.644 461 294 19 6 421 10 457 4.18e-16 80.9
MS.gene065244.t1 MTR_3g008010 32.044 181 105 7 245 421 288 454 4.23e-16 80.9
MS.gene065244.t1 MTR_5g040030 26.199 271 165 9 201 445 224 485 4.95e-16 80.5
MS.gene065244.t1 MTR_8g090095 26.820 261 169 8 195 436 218 475 5.23e-16 80.5
MS.gene065244.t1 MTR_5g072860 22.149 456 290 15 8 425 18 446 7.94e-16 79.7
MS.gene065244.t1 MTR_3g031450 28.889 180 109 5 245 420 263 427 1.12e-15 79.3
MS.gene065244.t1 MTR_6g014050 29.412 204 130 6 239 440 285 476 1.50e-15 79.0
MS.gene065244.t1 MTR_1g029540 26.122 245 159 7 195 423 200 438 1.66e-15 79.0
MS.gene065244.t1 MTR_7g070870 22.388 402 280 12 4 380 15 409 1.89e-15 78.6
MS.gene065244.t1 MTR_6g013920 29.032 186 115 6 239 413 283 462 2.15e-15 78.6
MS.gene065244.t1 MTR_6g014200 29.730 185 116 6 239 421 281 453 2.25e-15 78.6
MS.gene065244.t1 MTR_8g007585 30.726 179 110 6 245 421 202 368 2.40e-15 77.8
MS.gene065244.t1 MTR_7g470610 31.250 144 95 3 239 380 128 269 2.79e-15 76.6
MS.gene065244.t1 MTR_7g070583 31.250 144 95 3 239 380 128 269 2.79e-15 76.6
MS.gene065244.t1 MTR_4g108250 21.814 463 305 14 7 422 10 462 3.54e-15 77.8
MS.gene065244.t1 MTR_6g014310 27.801 241 146 9 196 421 230 457 8.47e-15 76.6
MS.gene065244.t1 MTR_6g035295 21.010 495 319 16 7 445 11 489 8.69e-15 76.6
MS.gene065244.t1 MTR_6g014187 23.188 483 304 19 8 440 10 475 9.28e-15 76.6
MS.gene065244.t1 MTR_7g070860 21.460 452 296 13 7 419 6 437 9.84e-15 76.6
MS.gene065244.t1 MTR_1g107285 28.017 232 139 8 205 421 222 440 1.17e-14 76.3
MS.gene065244.t1 MTR_6g014040 30.270 185 115 6 239 421 285 457 1.23e-14 76.3
MS.gene065244.t1 MTR_8g056740 24.675 231 160 5 196 416 111 337 1.72e-14 75.5
MS.gene065244.t1 MTR_5g464810 23.663 486 301 18 8 445 12 475 1.77e-14 75.9
MS.gene065244.t1 MTR_5g064240 23.663 486 301 18 8 445 12 475 1.77e-14 75.9
MS.gene065244.t1 MTR_6g013450 29.189 185 117 6 239 421 285 457 2.26e-14 75.5
MS.gene065244.t1 MTR_5g004940 35.537 121 76 2 239 358 193 312 3.67e-14 74.3
MS.gene065244.t1 MTR_6g014240 28.804 184 117 6 239 420 251 422 4.37e-14 74.3
MS.gene065244.t1 MTR_6g014150 31.447 159 99 5 239 392 281 434 7.00e-14 73.9
MS.gene065244.t1 MTR_5g072820 23.702 443 280 18 8 420 10 424 9.69e-14 73.2
MS.gene065244.t1 MTR_6g014290 28.108 185 119 6 239 421 282 454 1.48e-13 72.8
MS.gene065244.t1 MTR_5g072810 24.336 226 149 5 205 420 216 429 1.54e-13 72.8
MS.gene065244.t1 MTR_6g013960 21.915 470 310 14 8 432 10 467 2.97e-13 72.0
MS.gene065244.t1 MTR_2086s0010 28.025 157 104 4 265 421 1 148 4.22e-13 67.8
MS.gene065244.t1 MTR_1996s0010 28.025 157 104 4 265 421 1 148 4.22e-13 67.8
MS.gene065244.t1 MTR_0036s0220 27.717 184 122 5 239 422 282 454 4.35e-13 71.2
MS.gene065244.t1 MTR_5g072830 23.179 453 270 18 8 420 10 424 9.46e-13 70.1
MS.gene065244.t1 MTR_7g039550 25.000 264 165 8 206 445 5 259 1.56e-12 68.2
MS.gene065244.t1 MTR_7g080900 29.240 171 111 5 245 415 266 426 1.92e-12 69.3
MS.gene065244.t1 MTR_5g072840 21.973 446 284 17 8 420 10 424 4.08e-12 68.2
MS.gene065244.t1 MTR_6g078320 23.267 404 219 13 8 347 11 387 6.19e-12 67.8
MS.gene065244.t1 MTR_1g040310 29.379 177 111 6 239 412 273 438 7.12e-12 67.8
MS.gene065244.t1 MTR_6g014300 27.044 159 102 6 265 421 296 442 1.39e-11 66.6
MS.gene065244.t1 MTR_8g009840 29.944 177 102 5 260 421 333 502 1.76e-11 66.6
MS.gene065244.t1 MTR_0477s0010 29.189 185 117 6 239 421 121 293 2.84e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene065244.t1 AT4G27570 45.067 446 233 6 7 444 6 447 1.83e-141 412
MS.gene065244.t1 AT4G27560 44.944 445 233 6 8 444 7 447 3.43e-139 407
MS.gene065244.t1 AT5G54010 44.072 447 239 5 7 445 5 448 3.62e-139 407
MS.gene065244.t1 AT5G53990 44.420 448 230 6 7 445 5 442 7.56e-139 405
MS.gene065244.t1 AT1G64920 44.346 451 230 7 7 445 5 446 6.38e-138 403
MS.gene065244.t1 AT4G09500 43.498 446 239 6 3 442 1 439 8.58e-136 397
MS.gene065244.t1 AT1G64910 43.274 446 236 7 7 444 5 441 1.02e-133 392
MS.gene065244.t1 AT2G22930 43.624 447 241 5 3 444 1 441 2.45e-133 391
MS.gene065244.t1 AT3G29630 42.539 449 240 5 7 445 5 445 1.87e-132 389
MS.gene065244.t1 AT5G54060 43.886 458 234 6 7 444 12 466 4.90e-132 389
MS.gene065244.t1 AT3G29630 41.704 446 222 6 7 445 5 419 9.88e-125 369
MS.gene065244.t1 AT4G09500 41.573 445 224 7 3 442 1 414 5.61e-122 362
MS.gene065244.t1 AT1G50580 41.403 442 245 5 7 441 5 439 6.92e-120 357
MS.gene065244.t1 AT2G22590 34.498 458 271 14 7 440 14 466 1.03e-70 231
MS.gene065244.t1 AT5G49690 32.517 449 262 13 7 429 9 442 4.42e-64 214
MS.gene065244.t1 AT5G65550 30.769 468 286 16 5 444 6 463 5.41e-63 211
MS.gene065244.t1 AT2G22930 38.389 211 122 2 3 209 1 207 8.07e-47 163
MS.gene065244.t1 AT2G22930 35.238 105 63 3 343 444 187 289 5.10e-13 69.7
MS.gene065244.t1 AT5G03490 27.669 459 296 13 6 444 17 459 6.98e-38 144
MS.gene065244.t1 AT5G12890 27.332 461 286 15 4 423 6 458 1.43e-35 137
MS.gene065244.t1 AT1G51210 27.586 435 270 13 8 419 20 432 3.39e-35 135
MS.gene065244.t1 AT2G16890 27.617 449 278 20 8 422 9 444 1.07e-31 126
MS.gene065244.t1 AT1G73880 27.143 420 247 14 4 383 10 410 3.79e-31 125
MS.gene065244.t1 AT4G36770 28.788 462 258 19 7 421 3 440 5.44e-31 124
MS.gene065244.t1 AT2G15480 25.773 485 308 15 2 441 4 481 2.41e-30 123
MS.gene065244.t1 AT4G34131 25.673 483 298 17 7 440 9 479 1.77e-29 120
MS.gene065244.t1 AT1G05675 27.252 444 271 17 8 420 6 428 3.15e-29 119
MS.gene065244.t1 AT2G15480 25.214 468 300 13 2 426 4 464 4.38e-29 119
MS.gene065244.t1 AT2G15490 26.294 483 301 18 7 441 6 481 6.65e-29 119
MS.gene065244.t1 AT2G15490 26.250 480 302 17 7 441 6 478 7.32e-29 118
MS.gene065244.t1 AT4G34138 26.033 484 293 15 7 442 10 476 7.67e-29 119
MS.gene065244.t1 AT2G31750 24.473 474 290 17 8 440 8 454 3.30e-28 116
MS.gene065244.t1 AT2G16890 27.529 425 263 19 8 398 9 422 4.07e-28 115
MS.gene065244.t1 AT1G10400 25.424 472 297 18 7 437 6 463 5.97e-28 115
MS.gene065244.t1 AT2G31750 24.473 474 290 17 8 440 8 454 7.88e-28 115
MS.gene065244.t1 AT4G34135 26.457 446 264 15 7 402 10 441 9.33e-28 115
MS.gene065244.t1 AT2G36750 28.078 463 274 18 5 419 7 458 1.09e-27 115
MS.gene065244.t1 AT2G36800 26.797 459 285 17 6 419 10 462 5.74e-27 113
MS.gene065244.t1 AT1G01420 26.940 464 261 18 8 421 11 446 7.62e-27 112
MS.gene065244.t1 AT1G01420 26.940 464 261 18 8 421 8 443 8.82e-27 112
MS.gene065244.t1 AT2G36780 27.155 464 278 20 5 419 11 463 2.02e-26 111
MS.gene065244.t1 AT5G14860 26.824 466 269 20 8 422 8 452 2.66e-26 111
MS.gene065244.t1 AT2G18570 24.670 454 296 14 1 420 1 442 3.08e-26 110
MS.gene065244.t1 AT2G36770 27.056 462 281 20 5 419 11 463 5.47e-26 110
MS.gene065244.t1 AT1G05680 25.551 454 266 17 8 420 6 428 6.55e-26 109
MS.gene065244.t1 AT2G36760 27.754 472 265 19 5 419 11 463 1.59e-25 109
MS.gene065244.t1 AT4G01070 26.407 462 267 18 8 421 8 444 2.12e-24 105
MS.gene065244.t1 AT2G31790 25.111 450 275 17 8 420 8 432 2.68e-24 105
MS.gene065244.t1 AT2G18560 29.804 255 152 7 187 420 104 352 5.10e-24 103
MS.gene065244.t1 AT3G50740 26.087 460 277 19 8 421 7 449 2.60e-23 102
MS.gene065244.t1 AT5G66690 25.167 449 286 16 8 420 7 441 7.91e-23 101
MS.gene065244.t1 AT2G43820 25.160 469 288 18 8 441 7 447 1.01e-22 100
MS.gene065244.t1 AT3G53150 25.566 442 283 18 7 404 21 460 2.16e-22 100
MS.gene065244.t1 AT5G26310 24.468 470 302 17 8 438 7 462 2.46e-22 99.8
MS.gene065244.t1 AT2G30140 24.658 438 279 16 8 419 13 425 2.49e-22 99.4
MS.gene065244.t1 AT4G15480 24.719 445 292 17 4 415 15 449 3.71e-22 99.4
MS.gene065244.t1 AT3G46670 27.174 460 275 22 16 445 17 446 4.16e-22 98.6
MS.gene065244.t1 AT5G59580 25.974 462 292 20 8 441 9 448 4.94e-22 98.6
MS.gene065244.t1 AT4G15490 24.832 447 294 16 1 415 1 437 7.33e-22 98.2
MS.gene065244.t1 AT2G30150 24.204 471 307 18 4 444 6 456 8.03e-22 97.8
MS.gene065244.t1 AT2G30140 25.056 443 272 17 8 419 13 426 1.33e-21 97.4
MS.gene065244.t1 AT1G07250 28.302 265 175 8 189 440 210 472 1.69e-21 97.1
MS.gene065244.t1 AT2G36970 29.386 228 149 6 201 423 229 449 2.07e-21 97.1
MS.gene065244.t1 AT5G59590 29.779 272 169 11 181 445 191 447 3.24e-21 95.9
MS.gene065244.t1 AT3G53160 25.328 458 283 19 6 414 6 453 3.47e-21 96.3
MS.gene065244.t1 AT2G29730 25.513 439 283 14 7 411 4 432 5.30e-21 95.5
MS.gene065244.t1 AT1G24100 23.779 471 298 15 8 440 11 458 2.76e-20 93.2
MS.gene065244.t1 AT5G05880 24.169 451 289 13 1 415 1 434 2.77e-20 93.2
MS.gene065244.t1 AT2G30150 23.965 459 302 17 13 444 2 440 3.28e-20 92.8
MS.gene065244.t1 AT4G15280 30.252 238 142 6 227 445 243 475 4.75e-20 92.8
MS.gene065244.t1 AT4G15280 30.252 238 142 6 227 445 275 507 5.38e-20 92.8
MS.gene065244.t1 AT3G22250 26.190 462 250 22 9 414 9 435 1.03e-19 91.7
MS.gene065244.t1 AT3G21760 30.151 199 119 6 234 414 258 454 1.14e-19 91.7
MS.gene065244.t1 AT4G15260 29.358 218 132 6 245 445 144 356 1.28e-19 90.5
MS.gene065244.t1 AT2G43840 28.685 251 141 8 216 441 210 447 1.74e-19 90.9
MS.gene065244.t1 AT2G43840 29.851 201 127 5 245 441 257 447 1.79e-19 90.9
MS.gene065244.t1 AT2G36790 25.652 460 292 18 4 419 9 462 3.06e-19 90.5
MS.gene065244.t1 AT1G01390 26.337 486 276 20 8 440 8 464 4.67e-19 89.7
MS.gene065244.t1 AT1G01390 26.337 486 276 20 8 440 25 481 5.09e-19 89.7
MS.gene065244.t1 AT3G11340 26.047 430 269 16 9 414 10 414 5.29e-19 89.4
MS.gene065244.t1 AT1G22360 25.000 464 280 20 8 422 10 454 5.90e-19 89.4
MS.gene065244.t1 AT3G21790 28.328 293 170 8 170 440 204 478 6.70e-19 89.4
MS.gene065244.t1 AT1G06000 23.750 400 243 14 8 380 10 374 1.07e-18 88.6
MS.gene065244.t1 AT2G29710 34.239 184 113 6 231 411 254 432 1.17e-18 88.6
MS.gene065244.t1 AT3G21800 31.980 197 111 5 245 420 265 459 2.83e-18 87.4
MS.gene065244.t1 AT3G16520 32.727 165 105 3 244 404 262 424 2.97e-18 87.0
MS.gene065244.t1 AT3G16520 32.727 165 105 3 244 404 262 424 3.04e-18 87.0
MS.gene065244.t1 AT3G55700 30.732 205 127 5 232 431 246 440 3.09e-18 87.0
MS.gene065244.t1 AT3G16520 32.727 165 105 3 244 404 262 424 3.13e-18 87.0
MS.gene065244.t1 AT4G15550 22.551 439 299 14 5 410 12 442 3.23e-18 87.0
MS.gene065244.t1 AT3G46680 25.167 449 285 18 8 431 9 431 7.65e-18 85.9
MS.gene065244.t1 AT2G23260 27.888 251 154 9 190 421 188 430 7.76e-18 85.9
MS.gene065244.t1 AT5G05870 26.415 265 175 8 192 445 204 459 9.30e-18 85.9
MS.gene065244.t1 AT4G15500 32.402 179 111 6 245 421 269 439 9.64e-18 85.9
MS.gene065244.t1 AT3G21750 26.141 241 156 5 222 442 232 470 1.36e-17 85.1
MS.gene065244.t1 AT3G21560 32.948 173 106 6 245 415 279 443 1.45e-17 85.5
MS.gene065244.t1 AT1G05560 27.897 233 147 7 227 444 225 451 1.55e-17 85.1
MS.gene065244.t1 AT1G07240 32.973 185 114 5 245 421 274 456 1.77e-17 85.1
MS.gene065244.t1 AT1G05560 27.897 233 147 7 227 444 275 501 1.83e-17 85.1
MS.gene065244.t1 AT1G07260 28.384 229 152 6 222 440 245 471 2.25e-17 84.7
MS.gene065244.t1 AT2G23250 23.877 423 283 16 18 420 8 411 2.46e-17 84.3
MS.gene065244.t1 AT3G55710 32.275 189 119 5 245 431 263 444 2.67e-17 84.3
MS.gene065244.t1 AT5G05890 28.175 252 167 6 168 411 177 422 4.00e-17 84.0
MS.gene065244.t1 AT1G05530 26.908 249 158 7 208 438 206 448 5.50e-17 83.2
MS.gene065244.t1 AT3G21780 28.241 216 137 5 245 444 259 472 6.61e-17 83.2
MS.gene065244.t1 AT4G14090 23.992 471 280 22 5 434 12 445 7.66e-17 82.8
MS.gene065244.t1 AT2G29740 30.348 201 130 6 222 414 250 448 1.00e-16 82.8
MS.gene065244.t1 AT5G05860 24.605 443 278 17 7 420 8 423 1.60e-16 82.0
MS.gene065244.t1 AT1G22360 24.569 464 270 21 8 422 10 442 2.14e-16 81.6
MS.gene065244.t1 AT1G78270 23.696 460 291 18 8 422 13 457 7.69e-16 80.1
MS.gene065244.t1 AT3G46700 25.214 468 284 21 8 444 9 441 1.32e-15 79.0
MS.gene065244.t1 AT2G29750 31.351 185 117 6 227 403 255 437 1.46e-15 79.0
MS.gene065244.t1 AT5G38010 24.416 471 292 21 8 444 10 450 1.62e-15 79.0
MS.gene065244.t1 AT1G22380 23.261 460 293 19 8 422 13 457 3.99e-15 77.8
MS.gene065244.t1 AT2G26480 30.040 253 143 11 212 445 206 443 4.26e-15 77.4
MS.gene065244.t1 AT1G22400 30.337 178 114 5 245 422 291 458 1.23e-14 76.3
MS.gene065244.t1 AT2G28080 24.891 229 150 7 200 410 220 444 2.02e-14 75.5
MS.gene065244.t1 AT3G46650 24.601 439 282 17 8 431 10 414 4.79e-14 74.3
MS.gene065244.t1 AT3G02100 21.622 481 305 16 8 445 13 464 2.15e-13 72.4
MS.gene065244.t1 AT1G22340 27.228 202 136 5 244 445 289 479 5.45e-13 71.2
MS.gene065244.t1 AT5G05900 24.236 458 293 18 1 422 1 440 8.82e-13 70.5
MS.gene065244.t1 AT5G17050 26.816 179 118 5 244 422 269 434 9.75e-13 70.1
MS.gene065244.t1 AT5G17030 25.751 233 153 8 196 422 215 433 2.15e-12 69.3
MS.gene065244.t1 AT3G46720 28.095 210 127 7 239 445 250 438 7.10e-12 67.4

Find 83 sgRNAs with CRISPR-Local

Find 103 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCACAGTTCCTCATGTTAA+TGG 0.256113 2.1:-17750708 MS.gene065244:CDS
AAAGTCTCCAATACTTGATA+TGG 0.289217 2.1:-17750506 MS.gene065244:CDS
GGGTTTAATGAAAGAGTTAA+AGG 0.311231 2.1:-17749988 MS.gene065244:CDS
ACTCTTTCATTAAACCCTTC+AGG 0.318561 2.1:+17749994 None:intergenic
TTGCTTGGTCTTGAATTAAC+AGG 0.345544 2.1:-17750078 MS.gene065244:CDS
GGGACAAAGGTAATAAGATT+TGG 0.347167 2.1:+17750732 None:intergenic
GTTCAATAGCCTTCTCAGTT+TGG 0.358824 2.1:+17750613 None:intergenic
ACCTCTTATTGCTAATTTGT+TGG 0.362267 2.1:+17750818 None:intergenic
AAAGGAAAAGGAATTGTATA+TGG 0.374748 2.1:-17749970 MS.gene065244:CDS
GTGGTTTCATAAAATTTCTA+AGG 0.376324 2.1:+17750463 None:intergenic
GCAGCACTTAAGCCACCTAT+TGG 0.380205 2.1:-17750042 MS.gene065244:CDS
AAGGAATTGTATATGGAAGT+TGG 0.384799 2.1:-17749963 MS.gene065244:CDS
TTAACATGAGGAACTGTGAT+AGG 0.385255 2.1:+17750711 None:intergenic
GGCTTAAGTGCTGCAAGAAA+TGG 0.387827 2.1:+17750051 None:intergenic
AAAGGTTGCAGAGAAATTGA+TGG 0.402218 2.1:-17750294 MS.gene065244:CDS
TTGTTGGAGAGACGGAGAAA+TGG 0.411680 2.1:+17750834 None:intergenic
CAGTTTCAAGAGTTGTTGCT+TGG 0.416604 2.1:-17750093 MS.gene065244:CDS
AAAATGGGAATCATGGCTTA+AGG 0.418141 2.1:-17750178 MS.gene065244:CDS
TCAGCAAGGAAACTAGAGTT+TGG 0.421736 2.1:-17750381 MS.gene065244:CDS
AGAGGACCTGAAAGCAAAAC+AGG 0.423847 2.1:+17750234 None:intergenic
AAATCAAAGAAAACTATTTG+TGG 0.424765 2.1:+17750570 None:intergenic
AATGAAAGAGTTAAAGGAAA+AGG 0.433814 2.1:-17749982 MS.gene065244:CDS
CACGTGGCAAGAACACTAAC+TGG 0.434424 2.1:+17749845 None:intergenic
TCTGTGGTTTATTGTGCATA+TGG 0.439244 2.1:-17750141 MS.gene065244:CDS
AATAAGAGGGAATAAAGAAA+AGG 0.449142 2.1:+17750650 None:intergenic
AGGTAATAAGATTTGGATGA+AGG 0.449694 2.1:+17750739 None:intergenic
TTGGATTCCATATCAAGTAT+TGG 0.453859 2.1:+17750499 None:intergenic
TCAATAGTCTGAAATCCAAT+AGG 0.454018 2.1:+17750027 None:intergenic
AATGTTTCCATGGTTTGCTA+TGG 0.456397 2.1:-17750868 MS.gene065244:CDS
TCCATGGCTGTAGCAATAAG+AGG 0.461979 2.1:+17750636 None:intergenic
TCCAACAAATTAGCAATAAG+AGG 0.462527 2.1:-17750819 MS.gene065244:CDS
AAATGGGAATCATGGCTTAA+GGG 0.478566 2.1:-17750177 MS.gene065244:CDS
AGCCTTCTCAGTTTGGTCCA+TGG 0.481560 2.1:+17750620 None:intergenic
ATTGAGAAAGGTGATGAAGA+TGG 0.482932 2.1:-17749760 MS.gene065244:CDS
CTAAGGTAAGCTGTTAACAT+TGG 0.486976 2.1:+17750480 None:intergenic
TTGAAGAAGCTTTACCTGAA+GGG 0.490189 2.1:-17750008 MS.gene065244:CDS
TGAAACTTGATGCATGGATC+AGG 0.495689 2.1:+17750429 None:intergenic
CCCTCTTATTGCTACAGCCA+TGG 0.498844 2.1:-17750637 MS.gene065244:CDS
TCAGATGCAGTTGCTTTCAA+AGG 0.503016 2.1:-17750312 MS.gene065244:CDS
ATAAGAGGGAATAAAGAAAA+GGG 0.503468 2.1:+17750651 None:intergenic
ATGTTTCCATGGTTTGCTAT+GGG 0.504571 2.1:-17750867 MS.gene065244:CDS
TGCACATAGCAATGTTTCCA+TGG 0.504753 2.1:-17750878 MS.gene065244:CDS
TTTGGTGGCTCAGGTAAAAG+AGG 0.512418 2.1:+17750216 None:intergenic
TTGCTAATTTGTTGGAGAGA+CGG 0.513606 2.1:+17750826 None:intergenic
AGTTTCATTCACACGAACTT+CGG 0.526758 2.1:-17750413 MS.gene065244:CDS
CTAGTTTCCTTGCTGAAGCT+AGG 0.529748 2.1:+17750388 None:intergenic
ATGGATGAAAGGAATGAGGT+TGG 0.543415 2.1:-17749694 MS.gene065244:CDS
GTGTACGATCGAGTCGACAT+AGG 0.543485 2.1:-17750345 MS.gene065244:CDS
TGGAGCTGCTTCTATAACTG+AGG 0.546783 2.1:-17749884 MS.gene065244:CDS
GGGATTCAAGCATGGTTCTG+TGG 0.547152 2.1:-17750157 MS.gene065244:CDS
GGCTATTGAACTTCTTCTGA+CGG 0.548375 2.1:-17750601 MS.gene065244:CDS
TATTGTGCATATGGAAGTGA+AGG 0.565062 2.1:-17750132 MS.gene065244:CDS
ATTGAAGAAGCTTTACCTGA+AGG 0.566056 2.1:-17750009 MS.gene065244:CDS
TTGAGAAAGGTGATGAAGAT+GGG 0.567076 2.1:-17749759 MS.gene065244:CDS
ATTGCTATGTGCAAAGGAGG+AGG 0.567284 2.1:+17750888 None:intergenic
GTTGGAGTGGAAATTGAGAA+AGG 0.576091 2.1:-17749772 MS.gene065244:CDS
TAACATGAGGAACTGTGATA+GGG 0.579312 2.1:+17750712 None:intergenic
ATGAGGTTGGAAGAGAAGTG+AGG 0.579525 2.1:-17749681 MS.gene065244:CDS
TGAAGATTGTGATGGATGAA+AGG 0.583116 2.1:-17749705 MS.gene065244:CDS
AACATTGCTATGTGCAAAGG+AGG 0.593375 2.1:+17750885 None:intergenic
TAGTTTCAGCATCATGAGGA+AGG 0.594193 2.1:+17750685 None:intergenic
ACAGAAACTATCAACACAAG+AGG 0.595546 2.1:+17749609 None:intergenic
CATGGATCAGGCAACCCTGA+AGG 0.598509 2.1:+17750441 None:intergenic
GGAAACATTGCTATGTGCAA+AGG 0.601320 2.1:+17750882 None:intergenic
GGAGCTGCTTCTATAACTGA+GGG 0.605559 2.1:-17749883 MS.gene065244:CDS
TGGCTTAAGGGATTCAAGCA+TGG 0.607527 2.1:-17750165 MS.gene065244:CDS
TTCGGTTCCTAGCTTCAGCA+AGG 0.615547 2.1:-17750395 MS.gene065244:CDS
AGGAACTGTGATAGGGACAA+AGG 0.624768 2.1:+17750719 None:intergenic
TGTGATGGATGAAAGGAATG+AGG 0.626152 2.1:-17749698 MS.gene065244:CDS
ATAGTCTGAAATCCAATAGG+TGG 0.626788 2.1:+17750030 None:intergenic
GTTATGAAACATCCAACAGA+AGG 0.628836 2.1:+17749913 None:intergenic
AGGAAACTAGAGTTTGGCAG+TGG 0.630184 2.1:-17750375 MS.gene065244:CDS
CAAAGGAGGAGGAAGATCCA+TGG 0.630563 2.1:+17750899 None:intergenic
TGTGAATGAAACTTGATGCA+TGG 0.631614 2.1:+17750423 None:intergenic
CCATGGCTGTAGCAATAAGA+GGG 0.634014 2.1:+17750637 None:intergenic
AGCCATGGACCAAACTGAGA+AGG 0.634560 2.1:-17750622 MS.gene065244:CDS
GGATCAGGCAACCCTGAAGG+TGG 0.641702 2.1:+17750444 None:intergenic
CAAAGCTGTGAAGATTGTGA+TGG 0.655994 2.1:-17749713 MS.gene065244:CDS
AAGTGTCCCATAGCAAACCA+TGG 0.661811 2.1:+17750861 None:intergenic
GAAGTAGTTTCAGCATCATG+AGG 0.663497 2.1:+17750681 None:intergenic
TGAGGAAGGCCATTAACATG+AGG 0.680750 2.1:+17750699 None:intergenic
GGATGTTTCATAACACACTG+TGG 0.766209 2.1:-17749904 MS.gene065244:CDS
ATATGATCAGAACTTACACG+TGG 0.771040 2.1:+17749829 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTCTTTGATTTTCAATAT+TGG - chr2.1:17749919-17749938 MS.gene065244:CDS 15.0%
!! AAACTACTTTAGATGAAAAA+TGG - chr2.1:17750285-17750304 MS.gene065244:CDS 20.0%
!! AAATCAAAGAAAACTATTTG+TGG + chr2.1:17749912-17749931 None:intergenic 20.0%
!! AACTACTTTAGATGAAAAAT+GGG - chr2.1:17750286-17750305 MS.gene065244:CDS 20.0%
!! GGAAAAATCATAATGAATTA+AGG - chr2.1:17750819-17750838 MS.gene065244:CDS 20.0%
!!! GATTATCTTGAAAATCTTTT+TGG - chr2.1:17750218-17750237 MS.gene065244:CDS 20.0%
!!! TGAAACTGATTTTTTTCTAA+TGG + chr2.1:17750374-17750393 None:intergenic 20.0%
!!! TTTTCATCTAAAGTAGTTTT+TGG + chr2.1:17750284-17750303 None:intergenic 20.0%
! AAAGGAAAAGGAATTGTATA+TGG - chr2.1:17750509-17750528 MS.gene065244:CDS 25.0%
! AATAAGAGGGAATAAAGAAA+AGG + chr2.1:17749832-17749851 None:intergenic 25.0%
! AATGAAAGAGTTAAAGGAAA+AGG - chr2.1:17750497-17750516 MS.gene065244:CDS 25.0%
! ATAAGAGGGAATAAAGAAAA+GGG + chr2.1:17749831-17749850 None:intergenic 25.0%
! GTGGTTTCATAAAATTTCTA+AGG + chr2.1:17750019-17750038 None:intergenic 25.0%
!! ATGAGCAAAAAGTTTAAAGT+TGG - chr2.1:17750689-17750708 MS.gene065244:CDS 25.0%
AAAGTCTCCAATACTTGATA+TGG - chr2.1:17749973-17749992 MS.gene065244:CDS 30.0%
AAGGAATTGTATATGGAAGT+TGG - chr2.1:17750516-17750535 MS.gene065244:CDS 30.0%
AGGTAATAAGATTTGGATGA+AGG + chr2.1:17749743-17749762 None:intergenic 30.0%
GGGTTTAATGAAAGAGTTAA+AGG - chr2.1:17750491-17750510 MS.gene065244:CDS 30.0%
TAGATGAAAAATGGGAATCA+TGG - chr2.1:17750294-17750313 MS.gene065244:CDS 30.0%
TCCAACAAATTAGCAATAAG+AGG - chr2.1:17749660-17749679 MS.gene065244:CDS 30.0%
TTGGATTCCATATCAAGTAT+TGG + chr2.1:17749983-17750002 None:intergenic 30.0%
! AATTTTATGAAACCACCTTC+AGG - chr2.1:17750023-17750042 MS.gene065244:CDS 30.0%
! ACCTCTTATTGCTAATTTGT+TGG + chr2.1:17749664-17749683 None:intergenic 30.0%
! ATTTTATGAAACCACCTTCA+GGG - chr2.1:17750024-17750043 MS.gene065244:CDS 30.0%
! CAAAAAGTTTAAAGTTGGAG+TGG - chr2.1:17750694-17750713 MS.gene065244:CDS 30.0%
! TCAATAGTCTGAAATCCAAT+AGG + chr2.1:17750455-17750474 None:intergenic 30.0%
!! ACTTGTTGAGTGTGTTTTTA+GGG + chr2.1:17749707-17749726 None:intergenic 30.0%
!! TCATCTAAAGTAGTTTTTGG+TGG + chr2.1:17750281-17750300 None:intergenic 30.0%
!!! AACTTGTTGAGTGTGTTTTT+AGG + chr2.1:17749708-17749727 None:intergenic 30.0%
!!! ATTTTAGAACATCCTTCTGT+TGG - chr2.1:17750554-17750573 MS.gene065244:CDS 30.0%
AAAATGGGAATCATGGCTTA+AGG - chr2.1:17750301-17750320 MS.gene065244:CDS 35.0%
AAAGGTTGCAGAGAAATTGA+TGG - chr2.1:17750185-17750204 MS.gene065244:CDS 35.0%
AAATGGGAATCATGGCTTAA+GGG - chr2.1:17750302-17750321 MS.gene065244:CDS 35.0%
ACAGAAACTATCAACACAAG+AGG + chr2.1:17750873-17750892 None:intergenic 35.0%
ACTCTTTCATTAAACCCTTC+AGG + chr2.1:17750488-17750507 None:intergenic 35.0%
AGTTTCATTCACACGAACTT+CGG - chr2.1:17750066-17750085 MS.gene065244:CDS 35.0%
ATATGATCAGAACTTACACG+TGG + chr2.1:17750653-17750672 None:intergenic 35.0%
ATCACAGTTCCTCATGTTAA+TGG - chr2.1:17749771-17749790 MS.gene065244:CDS 35.0%
ATTGAAGAAGCTTTACCTGA+AGG - chr2.1:17750470-17750489 MS.gene065244:CDS 35.0%
ATTGAGAAAGGTGATGAAGA+TGG - chr2.1:17750719-17750738 MS.gene065244:CDS 35.0%
CTAAGGTAAGCTGTTAACAT+TGG + chr2.1:17750002-17750021 None:intergenic 35.0%
GGGACAAAGGTAATAAGATT+TGG + chr2.1:17749750-17749769 None:intergenic 35.0%
GTTATGAAACATCCAACAGA+AGG + chr2.1:17750569-17750588 None:intergenic 35.0%
TAACATGAGGAACTGTGATA+GGG + chr2.1:17749770-17749789 None:intergenic 35.0%
TATTGTGCATATGGAAGTGA+AGG - chr2.1:17750347-17750366 MS.gene065244:CDS 35.0%
TCTGTGGTTTATTGTGCATA+TGG - chr2.1:17750338-17750357 MS.gene065244:CDS 35.0%
TGTGAATGAAACTTGATGCA+TGG + chr2.1:17750059-17750078 None:intergenic 35.0%
TTAACATGAGGAACTGTGAT+AGG + chr2.1:17749771-17749790 None:intergenic 35.0%
TTGAAGAAGCTTTACCTGAA+GGG - chr2.1:17750471-17750490 MS.gene065244:CDS 35.0%
TTGAGAAAGGTGATGAAGAT+GGG - chr2.1:17750720-17750739 MS.gene065244:CDS 35.0%
! ATAGTCTGAAATCCAATAGG+TGG + chr2.1:17750452-17750471 None:intergenic 35.0%
!! AATGTTTCCATGGTTTGCTA+TGG - chr2.1:17749611-17749630 MS.gene065244:CDS 35.0%
!! ATGTTTCCATGGTTTGCTAT+GGG - chr2.1:17749612-17749631 MS.gene065244:CDS 35.0%
!! TGAAGATTGTGATGGATGAA+AGG - chr2.1:17750774-17750793 MS.gene065244:CDS 35.0%
!! TTGCTAATTTGTTGGAGAGA+CGG + chr2.1:17749656-17749675 None:intergenic 35.0%
!! TTGCTTGGTCTTGAATTAAC+AGG - chr2.1:17750401-17750420 MS.gene065244:CDS 35.0%
AACATTGCTATGTGCAAAGG+AGG + chr2.1:17749597-17749616 None:intergenic 40.0%
ATGGATGAAAGGAATGAGGT+TGG - chr2.1:17750785-17750804 MS.gene065244:CDS 40.0%
CAAAGCTGTGAAGATTGTGA+TGG - chr2.1:17750766-17750785 MS.gene065244:CDS 40.0%
CAGTTTCAAGAGTTGTTGCT+TGG - chr2.1:17750386-17750405 MS.gene065244:CDS 40.0%
CCAAACCTGACTCAAAAACT+TGG - chr2.1:17749945-17749964 MS.gene065244:CDS 40.0%
GAAGTAGTTTCAGCATCATG+AGG + chr2.1:17749801-17749820 None:intergenic 40.0%
GGAAACATTGCTATGTGCAA+AGG + chr2.1:17749600-17749619 None:intergenic 40.0%
GGATGTTTCATAACACACTG+TGG - chr2.1:17750575-17750594 MS.gene065244:CDS 40.0%
GGCTATTGAACTTCTTCTGA+CGG - chr2.1:17749878-17749897 MS.gene065244:CDS 40.0%
GTTCAATAGCCTTCTCAGTT+TGG + chr2.1:17749869-17749888 None:intergenic 40.0%
GTTGGAGTGGAAATTGAGAA+AGG - chr2.1:17750707-17750726 MS.gene065244:CDS 40.0%
TAGTTTCAGCATCATGAGGA+AGG + chr2.1:17749797-17749816 None:intergenic 40.0%
TCAGCAAGGAAACTAGAGTT+TGG - chr2.1:17750098-17750117 MS.gene065244:CDS 40.0%
TGAAACTTGATGCATGGATC+AGG + chr2.1:17750053-17750072 None:intergenic 40.0%
TGCACATAGCAATGTTTCCA+TGG - chr2.1:17749601-17749620 MS.gene065244:CDS 40.0%
! GGAAAACCTGTTTTGCTTTC+AGG - chr2.1:17750239-17750258 MS.gene065244:CDS 40.0%
! TCAGATGCAGTTGCTTTCAA+AGG - chr2.1:17750167-17750186 MS.gene065244:CDS 40.0%
!! TGTGATGGATGAAAGGAATG+AGG - chr2.1:17750781-17750800 MS.gene065244:CDS 40.0%
!!! AAAGTAGTTTTTGGTGGCTC+AGG + chr2.1:17750275-17750294 None:intergenic 40.0%
!!! CCAAGTTTTTGAGTCAGGTT+TGG + chr2.1:17749948-17749967 None:intergenic 40.0%
!!! TGATGCCAAGTTTTTGAGTC+AGG + chr2.1:17749953-17749972 None:intergenic 40.0%
AAGTGTCCCATAGCAAACCA+TGG + chr2.1:17749621-17749640 None:intergenic 45.0%
AGAGGACCTGAAAGCAAAAC+AGG + chr2.1:17750248-17750267 None:intergenic 45.0%
AGGAAACTAGAGTTTGGCAG+TGG - chr2.1:17750104-17750123 MS.gene065244:CDS 45.0%
AGGAACTGTGATAGGGACAA+AGG + chr2.1:17749763-17749782 None:intergenic 45.0%
ATGAGGTTGGAAGAGAAGTG+AGG - chr2.1:17750798-17750817 MS.gene065244:CDS 45.0%
ATTGCTATGTGCAAAGGAGG+AGG + chr2.1:17749594-17749613 None:intergenic 45.0%
CCATGGCTGTAGCAATAAGA+GGG + chr2.1:17749845-17749864 None:intergenic 45.0%
CTAGTTTCCTTGCTGAAGCT+AGG + chr2.1:17750094-17750113 None:intergenic 45.0%
GGAGCTGCTTCTATAACTGA+GGG - chr2.1:17750596-17750615 MS.gene065244:CDS 45.0%
TCCATGGCTGTAGCAATAAG+AGG + chr2.1:17749846-17749865 None:intergenic 45.0%
TGAGGAAGGCCATTAACATG+AGG + chr2.1:17749783-17749802 None:intergenic 45.0%
TGGAGCTGCTTCTATAACTG+AGG - chr2.1:17750595-17750614 MS.gene065244:CDS 45.0%
TGGCTTAAGGGATTCAAGCA+TGG - chr2.1:17750314-17750333 MS.gene065244:CDS 45.0%
TTGTTGGAGAGACGGAGAAA+TGG + chr2.1:17749648-17749667 None:intergenic 45.0%
! GGCTTAAGTGCTGCAAGAAA+TGG + chr2.1:17750431-17750450 None:intergenic 45.0%
! TTTGGTGGCTCAGGTAAAAG+AGG + chr2.1:17750266-17750285 None:intergenic 45.0%
AGCCATGGACCAAACTGAGA+AGG - chr2.1:17749857-17749876 MS.gene065244:CDS 50.0%
AGCCTTCTCAGTTTGGTCCA+TGG + chr2.1:17749862-17749881 None:intergenic 50.0%
CACGTGGCAAGAACACTAAC+TGG + chr2.1:17750637-17750656 None:intergenic 50.0%
CCCTCTTATTGCTACAGCCA+TGG - chr2.1:17749842-17749861 MS.gene065244:CDS 50.0%
GCAGCACTTAAGCCACCTAT+TGG - chr2.1:17750437-17750456 MS.gene065244:CDS 50.0%
GTGTACGATCGAGTCGACAT+AGG - chr2.1:17750134-17750153 MS.gene065244:CDS 50.0%
TTCGGTTCCTAGCTTCAGCA+AGG - chr2.1:17750084-17750103 MS.gene065244:CDS 50.0%
! GGGATTCAAGCATGGTTCTG+TGG - chr2.1:17750322-17750341 MS.gene065244:CDS 50.0%
CATGGATCAGGCAACCCTGA+AGG + chr2.1:17750041-17750060 None:intergenic 55.0%
GGATCAGGCAACCCTGAAGG+TGG + chr2.1:17750038-17750057 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 17749582 17750919 17749582 ID=MS.gene065244
chr2.1 mRNA 17749582 17750919 17749582 ID=MS.gene065244.t1;Parent=MS.gene065244
chr2.1 exon 17749582 17750919 17749582 ID=MS.gene065244.t1.exon1;Parent=MS.gene065244.t1
chr2.1 CDS 17749582 17750919 17749582 ID=cds.MS.gene065244.t1;Parent=MS.gene065244.t1
Gene Sequence

>MS.gene065244

ATGGATCTTCCTCCTCCTTTGCACATAGCAATGTTTCCATGGTTTGCTATGGGACACTTAACTCCATTTCTCCGTCTCTCCAACAAATTAGCAATAAGAGGTCACAAAATATCATTCTTCATCCCTAAAAACACACTCAACAAGTTACAACATCTCAACCTTCATCCAAATCTTATTACCTTTGTCCCTATCACAGTTCCTCATGTTAATGGCCTTCCTCATGATGCTGAAACTACTTCAGATGTGCCCTTTTCTTTATTCCCTCTTATTGCTACAGCCATGGACCAAACTGAGAAGGCTATTGAACTTCTTCTGACGGAACTAAAGCCACAAATAGTTTTCTTTGATTTTCAATATTGGCTTCCAAACCTGACTCAAAAACTTGGCATCAAAAGTCTCCAATACTTGATATGGAATCCAATGTTAACAGCTTACCTTAGAAATTTTATGAAACCACCTTCAGGGTTGCCTGATCCATGCATCAAGTTTCATTCACACGAACTTCGGTTCCTAGCTTCAGCAAGGAAACTAGAGTTTGGCAGTGGTATTTTAGTGTACGATCGAGTCGACATAGGCACAAATTTTTCAGATGCAGTTGCTTTCAAAGGTTGCAGAGAAATTGATGGACTATATGCTGATTATCTTGAAAATCTTTTTGGAAAACCTGTTTTGCTTTCAGGTCCTCTTTTACCTGAGCCACCAAAAACTACTTTAGATGAAAAATGGGAATCATGGCTTAAGGGATTCAAGCATGGTTCTGTGGTTTATTGTGCATATGGAAGTGAAGGTCCATTAGAAAAAAATCAGTTTCAAGAGTTGTTGCTTGGTCTTGAATTAACAGGTTTTCCATTTCTTGCAGCACTTAAGCCACCTATTGGATTTCAGACTATTGAAGAAGCTTTACCTGAAGGGTTTAATGAAAGAGTTAAAGGAAAAGGAATTGTATATGGAAGTTGGATTCAACAACAATTGATTTTAGAACATCCTTCTGTTGGATGTTTCATAACACACTGTGGAGCTGCTTCTATAACTGAGGGTCTTGTTAGCACGTGCCAGTTAGTGTTCTTGCCACGTGTAAGTTCTGATCATATCATTAATGCAAGAATGATGAGCAAAAAGTTTAAAGTTGGAGTGGAAATTGAGAAAGGTGATGAAGATGGGTTGTTTACAAATGAAAATGTGTGCAAAGCTGTGAAGATTGTGATGGATGAAAGGAATGAGGTTGGAAGAGAAGTGAGGAAAAATCATAATGAATTAAGGAAGTTTTTATTGAGTGAGAATTTAGAGTCCTCTTGTGTTGATAGTTTCTGTGAAAAGCTTCAAGATTTGATTCATTGA

Protein sequence

>MS.gene065244.t1

MDLPPPLHIAMFPWFAMGHLTPFLRLSNKLAIRGHKISFFIPKNTLNKLQHLNLHPNLITFVPITVPHVNGLPHDAETTSDVPFSLFPLIATAMDQTEKAIELLLTELKPQIVFFDFQYWLPNLTQKLGIKSLQYLIWNPMLTAYLRNFMKPPSGLPDPCIKFHSHELRFLASARKLEFGSGILVYDRVDIGTNFSDAVAFKGCREIDGLYADYLENLFGKPVLLSGPLLPEPPKTTLDEKWESWLKGFKHGSVVYCAYGSEGPLEKNQFQELLLGLELTGFPFLAALKPPIGFQTIEEALPEGFNERVKGKGIVYGSWIQQQLILEHPSVGCFITHCGAASITEGLVSTCQLVFLPRVSSDHIINARMMSKKFKVGVEIEKGDEDGLFTNENVCKAVKIVMDERNEVGREVRKNHNELRKFLLSENLESSCVDSFCEKLQDLIH