AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene73861


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene73861.t1 MTR_4g079270 96.188 446 17 0 1 446 17 462 0.0 901
MS.gene73861.t1 MTR_4g079250 89.462 446 47 0 1 446 17 462 0.0 845
MS.gene73861.t1 MTR_2g083490 60.449 445 172 3 1 443 17 459 0.0 548
MS.gene73861.t1 MTR_2g014900 56.532 444 190 2 1 443 16 457 0.0 542
MS.gene73861.t1 MTR_2g083380 59.775 445 175 3 1 443 34 476 0.0 539
MS.gene73861.t1 MTR_2g083480 59.091 440 176 3 1 438 17 454 0.0 534
MS.gene73861.t1 MTR_2g083430 58.559 444 180 3 1 442 17 458 0.0 524
MS.gene73861.t1 MTR_2g083390 57.207 444 162 4 1 442 17 434 2.98e-180 510
MS.gene73861.t1 MTR_2g083420 55.631 444 169 4 1 442 17 434 6.45e-177 502
MS.gene73861.t1 MTR_2g086283 45.372 443 128 8 1 442 7 336 1.20e-121 358
MS.gene73861.t1 MTR_2g083360 44.470 443 139 7 1 442 38 374 1.40e-118 351
MS.gene73861.t1 MTR_1g090270 41.463 451 244 11 1 441 24 464 1.53e-115 347
MS.gene73861.t1 MTR_4g079280 66.368 223 30 2 1 223 7 184 1.03e-99 296
MS.gene73861.t1 MTR_4g059370 40.698 344 180 8 106 442 66 392 5.67e-82 258
MS.gene73861.t1 MTR_4g123553 33.556 450 275 12 1 440 24 459 8.11e-67 221
MS.gene73861.t1 MTR_2g008220 34.444 450 272 16 1 438 23 461 1.09e-65 218
MS.gene73861.t1 MTR_2g008225 34.812 451 269 16 1 438 24 462 1.62e-65 218
MS.gene73861.t1 MTR_6g042310 34.581 454 265 15 1 440 27 462 3.14e-64 214
MS.gene73861.t1 MTR_7g067330 32.127 442 254 16 2 435 19 422 7.91e-63 209
MS.gene73861.t1 MTR_2g046620 33.481 451 274 15 1 440 25 460 1.19e-61 207
MS.gene73861.t1 MTR_8g068360 31.072 457 292 14 1 443 21 468 2.41e-59 201
MS.gene73861.t1 MTR_2g014930 37.671 292 98 5 1 291 9 217 2.87e-59 194
MS.gene73861.t1 MTR_6g036650 32.035 462 273 12 1 440 27 469 4.91e-59 201
MS.gene73861.t1 MTR_4g077960 32.379 454 275 15 1 440 1 436 5.82e-59 199
MS.gene73861.t1 MTR_7g067120 32.207 444 253 18 1 435 18 422 1.79e-58 198
MS.gene73861.t1 MTR_8g068340 30.905 453 295 13 1 441 21 467 3.49e-58 198
MS.gene73861.t1 MTR_2g008226 32.981 473 259 21 1 439 19 467 2.00e-55 191
MS.gene73861.t1 MTR_8g068330 29.605 456 301 15 1 443 17 465 1.74e-54 188
MS.gene73861.t1 MTR_8g007565 30.197 457 294 12 1 440 16 464 1.95e-51 180
MS.gene73861.t1 MTR_8g007650 30.197 457 294 12 1 440 16 464 4.42e-51 179
MS.gene73861.t1 MTR_5g066410 29.630 459 279 10 1 440 7 440 1.01e-50 178
MS.gene73861.t1 MTR_3g435310 31.532 444 248 14 1 440 27 418 1.67e-48 171
MS.gene73861.t1 MTR_1g090280 39.738 229 127 5 220 442 92 315 3.01e-47 165
MS.gene73861.t1 MTR_8g071070 27.447 470 296 11 2 441 17 471 7.13e-43 157
MS.gene73861.t1 MTR_2g098430 28.913 460 268 17 2 423 16 454 2.01e-39 148
MS.gene73861.t1 MTR_0009s0240 26.856 458 304 14 2 441 17 461 5.25e-37 141
MS.gene73861.t1 MTR_1g062380 27.862 463 299 12 2 432 26 485 4.30e-36 139
MS.gene73861.t1 MTR_2g083440 57.143 112 38 3 333 442 9 112 1.32e-35 127
MS.gene73861.t1 MTR_8g066610 28.172 465 282 16 2 430 19 467 1.79e-34 134
MS.gene73861.t1 MTR_7g013180 27.130 446 267 14 1 421 14 426 8.56e-32 126
MS.gene73861.t1 MTR_5g087620 27.105 487 298 18 2 441 20 496 3.65e-31 125
MS.gene73861.t1 MTR_2g059240 26.712 438 283 14 2 415 23 446 3.88e-31 125
MS.gene73861.t1 MTR_7g117405 28.188 447 283 12 2 420 22 458 2.98e-30 122
MS.gene73861.t1 MTR_4g024020 26.939 490 297 17 2 446 19 492 4.27e-30 122
MS.gene73861.t1 MTR_4g485590 29.426 401 222 14 2 379 19 381 9.20e-30 120
MS.gene73861.t1 MTR_4g485620 28.387 465 270 19 6 430 3 444 1.67e-29 120
MS.gene73861.t1 MTR_5g045970 25.212 472 299 15 2 432 26 484 3.51e-29 119
MS.gene73861.t1 MTR_7g102490 26.940 464 273 17 2 420 19 461 5.54e-29 119
MS.gene73861.t1 MTR_7g117170 27.215 474 285 17 1 437 24 474 6.50e-29 119
MS.gene73861.t1 MTR_8g027885 25.000 440 300 11 1 423 27 453 3.50e-28 116
MS.gene73861.t1 MTR_6g005600 25.065 387 261 5 36 404 56 431 7.13e-28 115
MS.gene73861.t1 MTR_8g466240 26.368 402 256 13 2 383 18 399 7.92e-28 115
MS.gene73861.t1 MTR_7g102550 26.271 472 298 17 2 435 19 478 9.53e-28 115
MS.gene73861.t1 MTR_7g102450 27.140 479 292 19 2 446 21 476 1.10e-27 115
MS.gene73861.t1 MTR_5g027210 30.040 253 146 4 196 418 212 463 1.13e-27 115
MS.gene73861.t1 MTR_7g013220 26.000 450 277 19 2 423 15 436 3.31e-27 113
MS.gene73861.t1 MTR_7g102460 26.813 455 283 17 2 420 19 459 5.89e-27 113
MS.gene73861.t1 MTR_8g009050 31.967 244 143 6 218 442 231 470 7.61e-27 112
MS.gene73861.t1 MTR_2g046820 32.819 259 154 7 201 443 210 464 1.19e-26 112
MS.gene73861.t1 MTR_4g031800 25.800 469 297 16 2 438 19 468 1.85e-26 111
MS.gene73861.t1 MTR_1g107375 27.354 446 263 15 2 419 18 430 1.93e-26 111
MS.gene73861.t1 MTR_5g045960 26.800 500 277 20 2 443 19 487 2.22e-26 111
MS.gene73861.t1 MTR_7g070660 25.223 448 289 16 2 417 21 454 9.18e-26 109
MS.gene73861.t1 MTR_7g102520 26.696 457 285 18 2 420 22 466 1.14e-25 109
MS.gene73861.t1 MTR_7g013200 25.000 452 273 17 2 428 15 425 1.16e-25 108
MS.gene73861.t1 MTR_8g009055 24.307 469 311 14 3 442 17 470 1.23e-25 109
MS.gene73861.t1 MTR_8g027870 24.661 442 299 14 1 423 27 453 1.28e-25 109
MS.gene73861.t1 MTR_8g012635 28.571 252 152 3 182 405 185 436 1.69e-25 108
MS.gene73861.t1 MTR_1g107315 27.907 430 252 16 2 396 18 424 2.62e-25 108
MS.gene73861.t1 MTR_0184s0030 27.925 265 164 7 183 423 187 448 3.27e-25 108
MS.gene73861.t1 MTR_8g006730 23.788 433 300 11 1 411 15 439 4.21e-25 107
MS.gene73861.t1 MTR_1g107350 26.376 436 265 13 2 403 18 431 4.50e-25 107
MS.gene73861.t1 MTR_7g102560 25.983 458 285 14 2 420 19 461 7.18e-25 107
MS.gene73861.t1 MTR_6g035185 25.270 463 277 15 2 419 21 459 8.49e-25 107
MS.gene73861.t1 MTR_4g117980 25.056 447 276 16 2 408 21 448 9.38e-25 107
MS.gene73861.t1 MTR_6g023665 24.828 435 291 13 1 411 22 444 1.10e-24 106
MS.gene73861.t1 MTR_7g013240 25.298 419 269 15 2 404 16 406 1.56e-24 105
MS.gene73861.t1 MTR_4g117960 25.959 443 270 15 2 405 21 444 1.61e-24 106
MS.gene73861.t1 MTR_1g032490 27.315 432 252 14 2 396 20 426 1.66e-24 105
MS.gene73861.t1 MTR_6g038220 26.327 452 277 15 2 432 21 437 1.76e-24 105
MS.gene73861.t1 MTR_0078s0010 23.308 399 265 10 52 419 54 442 1.95e-24 105
MS.gene73861.t1 MTR_4g485630 25.561 446 289 14 2 417 19 451 2.32e-24 105
MS.gene73861.t1 MTR_6g038240 25.701 428 261 17 2 403 21 417 3.13e-24 105
MS.gene73861.t1 MTR_6g488280 29.412 272 172 8 155 411 171 437 3.20e-24 105
MS.gene73861.t1 MTR_0428s0010 29.412 272 172 8 155 411 171 437 3.20e-24 105
MS.gene73861.t1 MTR_6g038200 26.039 457 273 16 2 432 21 438 3.99e-24 104
MS.gene73861.t1 MTR_7g070740 23.736 455 291 13 2 417 21 458 5.94e-24 104
MS.gene73861.t1 MTR_2g040530 25.000 456 271 17 39 443 31 466 7.59e-24 103
MS.gene73861.t1 MTR_5g035580 24.283 453 265 15 2 420 23 431 1.07e-23 103
MS.gene73861.t1 MTR_8g074550 24.784 464 287 16 1 418 17 464 1.46e-23 103
MS.gene73861.t1 MTR_0078s0060 24.874 398 259 11 52 419 54 441 1.49e-23 103
MS.gene73861.t1 MTR_7g046490 29.958 237 148 5 195 416 206 439 1.49e-23 103
MS.gene73861.t1 MTR_0536s0020 25.721 451 259 18 2 408 28 446 1.78e-23 103
MS.gene73861.t1 MTR_7g070810 23.963 434 287 14 2 405 19 439 2.56e-23 102
MS.gene73861.t1 MTR_2g046750 30.769 260 158 8 201 443 213 467 2.59e-23 102
MS.gene73861.t1 MTR_8g006260 24.869 382 253 11 56 411 69 442 2.78e-23 102
MS.gene73861.t1 MTR_8g012650 27.600 250 153 4 182 403 185 434 4.90e-23 101
MS.gene73861.t1 MTR_3g049970 27.962 422 262 17 2 396 19 425 5.68e-23 101
MS.gene73861.t1 MTR_8g012730 32.759 174 103 1 245 404 99 272 6.41e-23 99.0
MS.gene73861.t1 MTR_7g013260 31.683 202 123 5 226 422 229 420 6.50e-23 100
MS.gene73861.t1 MTR_3g069710 25.328 458 293 18 2 438 22 451 6.80e-23 101
MS.gene73861.t1 MTR_8g012745 29.600 250 149 5 182 405 185 433 6.84e-23 101
MS.gene73861.t1 MTR_7g070610 23.904 456 294 14 2 419 23 463 8.03e-23 101
MS.gene73861.t1 MTR_8g064870 27.400 427 268 15 2 400 21 433 8.84e-23 100
MS.gene73861.t1 MTR_6g033615 26.586 331 217 8 90 410 108 422 1.13e-22 100
MS.gene73861.t1 MTR_5g035560 25.164 457 256 17 2 420 21 429 1.89e-22 100
MS.gene73861.t1 MTR_6g038230 25.602 457 275 16 2 432 21 438 2.48e-22 99.4
MS.gene73861.t1 MTR_7g070940 22.581 434 302 11 2 411 19 442 3.18e-22 99.4
MS.gene73861.t1 MTR_4g128720 31.513 238 149 7 186 422 211 435 3.37e-22 99.0
MS.gene73861.t1 MTR_8g012630 32.000 175 105 1 245 405 206 380 5.03e-22 98.2
MS.gene73861.t1 MTR_1g019520 30.366 191 120 2 244 423 5 193 5.67e-22 94.4
MS.gene73861.t1 MTR_8g032950 25.959 443 280 17 2 411 22 449 6.12e-22 98.6
MS.gene73861.t1 MTR_0184s0040 27.451 255 163 7 186 423 212 461 6.33e-22 98.6
MS.gene73861.t1 MTR_0078s0190 27.451 255 163 7 186 423 212 461 6.33e-22 98.6
MS.gene73861.t1 MTR_1g107360 31.818 220 124 5 191 396 210 417 6.36e-22 98.2
MS.gene73861.t1 MTR_8g006270 26.685 356 217 13 47 378 66 401 6.48e-22 98.2
MS.gene73861.t1 MTR_4g117950 24.434 442 265 13 2 405 16 426 6.74e-22 98.2
MS.gene73861.t1 MTR_6g033625 25.000 436 271 18 2 403 14 427 6.83e-22 98.2
MS.gene73861.t1 MTR_2g035040 32.461 191 113 4 244 419 174 363 7.65e-22 97.4
MS.gene73861.t1 MTR_8g088560 24.609 447 304 14 2 433 20 448 9.40e-22 97.8
MS.gene73861.t1 MTR_5g090580 27.306 271 167 6 190 434 204 470 9.63e-22 97.8
MS.gene73861.t1 MTR_8g064880 27.273 429 262 17 2 396 19 431 1.20e-21 97.4
MS.gene73861.t1 MTR_4g094920 30.738 244 147 9 220 446 246 484 1.49e-21 97.4
MS.gene73861.t1 MTR_8g077590 26.708 322 217 5 96 404 115 430 1.60e-21 97.1
MS.gene73861.t1 MTR_5g070040 26.160 474 299 17 1 446 20 470 1.66e-21 97.1
MS.gene73861.t1 MTR_2g034990 24.834 451 277 16 2 411 21 450 1.67e-21 97.1
MS.gene73861.t1 MTR_7g047030 22.535 426 284 11 52 441 54 469 2.08e-21 96.7
MS.gene73861.t1 MTR_7g047270 22.535 426 284 11 52 441 54 469 2.08e-21 96.7
MS.gene73861.t1 MTR_7g055710 22.757 457 293 13 2 417 21 458 2.60e-21 96.7
MS.gene73861.t1 MTR_7g071040 24.944 449 269 15 2 411 27 446 2.78e-21 96.7
MS.gene73861.t1 MTR_5g090700 27.636 275 169 6 183 431 199 469 2.82e-21 96.3
MS.gene73861.t1 MTR_1g029540 31.308 214 135 4 199 400 206 419 2.88e-21 96.3
MS.gene73861.t1 MTR_8g465670 23.853 436 273 14 1 401 16 427 3.71e-21 95.9
MS.gene73861.t1 MTR_5g090620 27.612 268 162 7 183 422 196 459 4.09e-21 95.9
MS.gene73861.t1 MTR_8g006710 26.667 270 183 5 155 411 171 438 4.90e-21 95.5
MS.gene73861.t1 MTR_8g008990 28.364 275 170 8 191 442 202 472 5.60e-21 95.5
MS.gene73861.t1 MTR_4g117890 24.390 451 265 17 2 408 23 441 5.69e-21 95.5
MS.gene73861.t1 MTR_4g095008 31.863 204 129 6 245 442 266 465 5.70e-21 95.9
MS.gene73861.t1 MTR_6g038300 23.702 443 284 15 2 420 21 433 5.93e-21 95.5
MS.gene73861.t1 MTR_8g044140 24.272 412 239 12 48 412 37 422 6.15e-21 95.5
MS.gene73861.t1 MTR_3g069690 29.435 248 158 8 183 419 185 426 6.29e-21 95.1
MS.gene73861.t1 MTR_2g035020 24.719 445 274 15 2 405 21 445 6.33e-21 95.5
MS.gene73861.t1 MTR_8g009067 29.108 213 138 3 218 419 113 323 6.84e-21 94.0
MS.gene73861.t1 MTR_8g009067 29.108 213 138 3 218 419 231 441 7.92e-21 95.1
MS.gene73861.t1 MTR_3g009510 27.273 253 159 5 191 420 204 454 8.25e-21 95.1
MS.gene73861.t1 MTR_5g090610 26.756 299 180 9 167 431 160 453 8.67e-21 94.7
MS.gene73861.t1 MTR_5g098930 26.715 277 168 8 174 422 182 451 1.06e-20 94.7
MS.gene73861.t1 MTR_1g019510 28.796 191 123 2 244 423 256 444 1.10e-20 94.7
MS.gene73861.t1 MTR_6g014020 28.016 257 156 7 181 424 216 456 1.12e-20 94.7
MS.gene73861.t1 MTR_8g009073 30.688 189 119 2 241 419 126 312 1.18e-20 93.2
MS.gene73861.t1 MTR_8g009073 30.688 189 119 2 241 419 255 441 1.34e-20 94.4
MS.gene73861.t1 MTR_7g080940 24.146 439 284 15 2 420 21 430 1.37e-20 94.4
MS.gene73861.t1 MTR_8g006220 23.077 442 277 13 1 401 15 434 1.41e-20 94.4
MS.gene73861.t1 MTR_0288s0020 30.846 201 121 5 183 380 219 404 2.00e-20 94.0
MS.gene73861.t1 MTR_7g070800 23.894 452 291 14 2 417 16 450 3.39e-20 93.2
MS.gene73861.t1 MTR_3g079480 23.898 431 245 15 2 379 31 431 3.50e-20 93.2
MS.gene73861.t1 MTR_1g107285 31.963 219 127 6 191 396 210 419 3.93e-20 92.8
MS.gene73861.t1 MTR_8g009063 26.241 282 183 6 183 443 201 478 4.33e-20 92.8
MS.gene73861.t1 MTR_8g083290 29.084 251 145 8 187 420 207 441 4.36e-20 92.8
MS.gene73861.t1 MTR_6g033725 27.615 239 164 4 186 418 202 437 4.90e-20 92.8
MS.gene73861.t1 MTR_5g090630 24.872 390 240 11 78 431 86 458 5.40e-20 92.4
MS.gene73861.t1 MTR_6g013440 28.390 236 145 6 183 404 219 444 5.99e-20 92.4
MS.gene73861.t1 MTR_7g012120 32.955 176 103 3 245 405 272 447 6.26e-20 92.4
MS.gene73861.t1 MTR_5g019580 29.474 190 118 3 244 417 290 479 8.15e-20 92.4
MS.gene73861.t1 MTR_5g019580 29.474 190 118 3 244 417 266 455 9.11e-20 92.0
MS.gene73861.t1 MTR_3g479520 23.789 475 318 14 2 445 25 486 9.95e-20 91.7
MS.gene73861.t1 MTR_1g107365 31.429 210 117 5 201 396 251 447 1.04e-19 91.7
MS.gene73861.t1 MTR_0536s0010 30.645 186 113 3 240 411 263 446 1.11e-19 91.7
MS.gene73861.t1 MTR_4g128690 29.787 235 151 7 186 419 208 429 1.25e-19 91.3
MS.gene73861.t1 MTR_6g033675 26.176 340 229 9 90 418 112 440 1.32e-19 91.3
MS.gene73861.t1 MTR_4g118000 25.441 397 254 14 2 379 22 395 1.35e-19 91.3
MS.gene73861.t1 MTR_7g080935 26.000 350 211 12 93 420 107 430 2.68e-19 90.5
MS.gene73861.t1 MTR_6g013920 29.388 245 138 9 193 422 227 451 2.91e-19 90.5
MS.gene73861.t1 MTR_6g035265 28.718 195 123 3 233 411 249 443 3.01e-19 90.5
MS.gene73861.t1 MTR_3g479610 28.500 200 128 4 193 379 58 255 3.54e-19 88.6
MS.gene73861.t1 MTR_5g098960 36.158 177 96 8 245 417 262 425 4.11e-19 89.7
MS.gene73861.t1 MTR_4g008630 30.583 206 134 3 183 379 194 399 4.50e-19 89.7
MS.gene73861.t1 MTR_7g070910 22.052 458 298 14 1 417 20 459 4.79e-19 89.7
MS.gene73861.t1 MTR_6g013900 29.508 244 148 8 181 411 215 447 8.62e-19 89.0
MS.gene73861.t1 MTR_4g485640 25.166 453 266 20 2 412 219 640 9.13e-19 89.4
MS.gene73861.t1 MTR_6g014310 28.571 231 143 7 183 400 219 440 9.26e-19 89.0
MS.gene73861.t1 MTR_4g082820 25.541 462 285 15 1 427 16 453 1.06e-18 88.6
MS.gene73861.t1 MTR_8g090095 28.807 243 156 6 199 429 224 461 1.13e-18 88.6
MS.gene73861.t1 MTR_2g008210 26.819 481 264 19 2 429 21 466 1.44e-18 88.2
MS.gene73861.t1 MTR_5g031860 25.183 409 260 13 2 380 22 414 1.50e-18 88.2
MS.gene73861.t1 MTR_8g008970 29.108 213 138 3 218 419 231 441 1.73e-18 88.6
MS.gene73861.t1 MTR_8g008970 32.099 162 103 2 244 404 597 752 4.01e-16 81.3
MS.gene73861.t1 MTR_7g070930 23.644 461 285 15 2 417 24 462 1.79e-18 88.2
MS.gene73861.t1 MTR_7g011470 27.160 243 153 7 190 419 207 438 2.18e-18 87.8
MS.gene73861.t1 MTR_5g067170 31.915 188 113 3 233 405 256 443 2.35e-18 87.8
MS.gene73861.t1 MTR_8g083280 29.825 228 135 7 201 418 225 437 2.59e-18 87.4
MS.gene73861.t1 MTR_7g011470 27.160 243 153 7 190 419 211 442 2.69e-18 87.4
MS.gene73861.t1 MTR_5g090670 25.271 277 175 6 183 431 197 469 3.45e-18 87.0
MS.gene73861.t1 MTR_6g014150 28.099 242 152 7 175 403 207 439 3.62e-18 87.0
MS.gene73861.t1 MTR_4g082810 26.598 391 254 11 1 369 16 395 4.34e-18 86.3
MS.gene73861.t1 MTR_7g080950 24.545 440 287 13 2 423 16 428 5.16e-18 86.3
MS.gene73861.t1 MTR_5g058320 28.511 235 150 6 181 404 201 428 5.25e-18 86.7
MS.gene73861.t1 MTR_1g040310 23.148 432 293 13 3 405 26 447 5.74e-18 86.7
MS.gene73861.t1 MTR_7g070860 23.333 450 282 13 2 417 17 437 7.21e-18 86.3
MS.gene73861.t1 MTR_5g004940 34.884 172 103 5 226 392 182 349 7.68e-18 85.5
MS.gene73861.t1 MTR_7g070780 22.727 462 287 15 2 417 21 458 8.84e-18 85.9
MS.gene73861.t1 MTR_0891s0010 25.893 224 147 5 193 403 35 252 9.66e-18 84.0
MS.gene73861.t1 MTR_5g039900 21.861 462 310 15 3 431 24 467 1.37e-17 85.5
MS.gene73861.t1 MTR_5g090600 25.564 266 167 7 184 431 194 446 1.43e-17 85.1
MS.gene73861.t1 MTR_5g090660 25.862 232 151 4 220 431 235 465 1.59e-17 85.5
MS.gene73861.t1 MTR_5g075440 27.016 248 150 6 191 423 205 436 1.71e-17 84.7
MS.gene73861.t1 MTR_6g014170 31.515 165 107 3 239 403 266 424 2.64e-17 84.3
MS.gene73861.t1 MTR_6g033660 29.442 197 130 4 225 418 249 439 2.89e-17 84.3
MS.gene73861.t1 MTR_6g014200 28.169 213 139 5 179 380 211 420 4.08e-17 84.0
MS.gene73861.t1 MTR_6g014270 27.542 236 149 7 181 403 215 441 4.24e-17 84.0
MS.gene73861.t1 MTR_3g084530 28.293 205 130 4 223 420 256 450 4.39e-17 83.6
MS.gene73861.t1 MTR_6g011340 28.218 202 127 5 192 380 227 423 4.84e-17 83.6
MS.gene73861.t1 MTR_3g008010 33.333 138 86 3 245 380 288 421 5.76e-17 83.2
MS.gene73861.t1 MTR_3g084520 28.000 200 133 4 225 420 258 450 5.94e-17 83.2
MS.gene73861.t1 MTR_5g031830 23.659 410 266 12 2 380 22 415 6.85e-17 83.2
MS.gene73861.t1 MTR_3g479490 31.111 135 92 1 245 379 283 416 7.68e-17 82.8
MS.gene73861.t1 MTR_7g070870 23.367 398 268 12 2 379 29 409 7.78e-17 82.8
MS.gene73861.t1 MTR_8g059425 27.094 203 130 5 191 380 224 421 8.70e-17 82.8
MS.gene73861.t1 MTR_5g029800 31.792 173 103 3 244 401 265 437 9.44e-17 82.8
MS.gene73861.t1 MTR_1g107380 28.571 217 138 8 204 408 230 441 1.15e-16 82.4
MS.gene73861.t1 MTR_4g108250 30.000 180 113 4 245 412 281 459 1.19e-16 82.4
MS.gene73861.t1 MTR_7g470610 30.769 143 96 2 239 379 128 269 1.21e-16 80.5
MS.gene73861.t1 MTR_7g070583 30.769 143 96 2 239 379 128 269 1.21e-16 80.5
MS.gene73861.t1 MTR_6g013450 27.778 234 151 6 181 403 217 443 1.21e-16 82.4
MS.gene73861.t1 MTR_6g014250 27.358 212 135 5 183 380 215 421 1.24e-16 82.4
MS.gene73861.t1 MTR_6g014050 27.700 213 136 5 181 380 217 424 1.38e-16 82.0
MS.gene73861.t1 MTR_4g064987 25.909 440 241 23 2 411 18 402 1.65e-16 81.6
MS.gene73861.t1 MTR_5g070090 28.185 259 157 11 175 420 194 436 1.92e-16 81.6
MS.gene73861.t1 MTR_4g064987 25.785 446 240 23 2 411 18 408 2.54e-16 81.3
MS.gene73861.t1 MTR_6g035295 21.818 440 299 12 3 408 23 451 5.20e-16 80.5
MS.gene73861.t1 MTR_6g014190 27.053 207 136 5 239 443 91 284 5.86e-16 78.6
MS.gene73861.t1 MTR_8g056740 27.907 172 120 3 245 415 170 338 8.50e-16 79.3
MS.gene73861.t1 MTR_3g084540 28.125 224 141 6 207 420 238 451 8.97e-16 79.7
MS.gene73861.t1 MTR_6g013990 26.131 199 133 4 193 380 226 421 1.05e-15 79.3
MS.gene73861.t1 MTR_3g479470 24.337 415 264 15 2 380 23 423 1.10e-15 79.3
MS.gene73861.t1 MTR_5g040030 23.868 243 161 5 199 419 224 464 1.28e-15 79.3
MS.gene73861.t1 MTR_6g014220 32.168 143 93 3 239 380 282 421 1.28e-15 79.3
MS.gene73861.t1 MTR_8g007585 31.944 144 92 3 239 380 196 335 1.31e-15 78.6
MS.gene73861.t1 MTR_6g014040 26.601 203 131 5 191 380 227 424 1.51e-15 79.0
MS.gene73861.t1 MTR_6g014240 27.692 195 128 4 190 380 205 390 1.55e-15 79.0
MS.gene73861.t1 MTR_5g016660 21.694 484 313 17 3 441 21 483 2.12e-15 78.6
MS.gene73861.t1 MTR_3g009490 31.515 165 97 4 270 420 4 166 2.15e-15 74.7
MS.gene73861.t1 MTR_5g016480 25.311 241 162 6 220 446 239 475 3.36e-15 77.8
MS.gene73861.t1 MTR_5g072860 24.686 239 160 4 191 420 216 443 3.37e-15 77.8
MS.gene73861.t1 MTR_5g072830 23.018 391 263 12 40 418 60 424 3.78e-15 77.8
MS.gene73861.t1 MTR_6g014187 26.364 220 144 5 174 380 209 423 4.03e-15 77.8
MS.gene73861.t1 MTR_7g071050 28.571 189 120 6 235 411 223 408 5.81e-15 77.0
MS.gene73861.t1 MTR_0036s0220 24.880 418 263 16 2 383 22 424 9.00e-15 76.6
MS.gene73861.t1 MTR_7g080900 27.917 240 151 5 176 401 184 415 1.50e-14 75.9
MS.gene73861.t1 MTR_5g072840 23.095 433 293 14 2 420 20 426 1.76e-14 75.5
MS.gene73861.t1 MTR_5g464760 26.939 245 152 8 187 420 228 456 2.94e-14 75.1
MS.gene73861.t1 MTR_5g464810 29.208 202 129 6 193 383 226 424 3.45e-14 74.7
MS.gene73861.t1 MTR_5g064240 29.208 202 129 6 193 383 226 424 3.45e-14 74.7
MS.gene73861.t1 MTR_5g031840 28.384 229 144 7 193 409 212 432 4.22e-14 74.3
MS.gene73861.t1 MTR_5g072810 22.278 395 270 14 40 421 62 432 4.97e-14 74.3
MS.gene73861.t1 MTR_2086s0010 31.818 110 74 1 270 379 6 114 5.58e-14 70.5
MS.gene73861.t1 MTR_1996s0010 31.818 110 74 1 270 379 6 114 5.58e-14 70.5
MS.gene73861.t1 MTR_6g014290 29.032 155 104 3 228 380 271 421 6.37e-14 73.9
MS.gene73861.t1 MTR_6g014300 25.871 201 133 6 183 379 220 408 7.91e-14 73.6
MS.gene73861.t1 MTR_4g094220 26.891 238 141 10 167 380 194 422 6.12e-13 70.9
MS.gene73861.t1 MTR_6g013960 25.962 208 133 6 193 384 228 430 6.72e-13 70.9
MS.gene73861.t1 MTR_8g009840 28.671 143 102 0 301 443 388 530 8.35e-13 70.5
MS.gene73861.t1 MTR_0477s0010 30.556 144 94 3 239 380 121 260 9.02e-13 69.3
MS.gene73861.t1 MTR_0536s0030 32.331 133 77 4 295 416 194 324 1.40e-11 66.2
MS.gene73861.t1 MTR_3g031450 23.404 235 152 5 191 411 200 420 1.61e-11 66.6
MS.gene73861.t1 MTR_7g039550 23.529 221 150 2 204 405 5 225 2.53e-11 64.3
MS.gene73861.t1 MTR_8g043470 28.302 159 108 3 245 403 188 340 4.49e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene73861.t1 AT5G54060 48.998 449 220 4 1 443 22 467 9.92e-150 434
MS.gene73861.t1 AT5G54010 45.067 446 236 3 1 446 15 451 2.29e-147 427
MS.gene73861.t1 AT4G27570 45.067 446 229 5 2 444 17 449 2.50e-143 417
MS.gene73861.t1 AT4G27560 44.643 448 232 4 2 446 17 451 3.33e-142 414
MS.gene73861.t1 AT5G53990 44.889 450 225 4 1 446 15 445 3.75e-141 411
MS.gene73861.t1 AT2G22930 45.045 444 221 4 1 440 15 439 2.37e-138 404
MS.gene73861.t1 AT3G29630 44.124 451 230 5 1 446 15 448 1.47e-135 397
MS.gene73861.t1 AT1G64910 42.986 442 237 4 1 442 15 441 7.92e-135 395
MS.gene73861.t1 AT1G64920 43.596 445 232 4 2 442 16 445 2.30e-132 389
MS.gene73861.t1 AT4G09500 43.018 444 230 5 1 440 15 439 1.56e-130 384
MS.gene73861.t1 AT3G29630 42.444 450 213 5 1 446 15 422 3.45e-127 375
MS.gene73861.t1 AT1G50580 40.227 440 247 4 1 439 15 439 3.92e-121 360
MS.gene73861.t1 AT4G09500 41.216 444 213 6 1 440 15 414 1.13e-118 353
MS.gene73861.t1 AT5G49690 32.584 445 275 14 1 435 19 448 5.65e-68 224
MS.gene73861.t1 AT2G22590 32.294 449 281 16 1 435 24 463 1.21e-65 218
MS.gene73861.t1 AT5G65550 31.739 460 286 18 1 444 18 465 2.50e-58 199
MS.gene73861.t1 AT2G22930 40.758 211 103 3 1 207 15 207 3.44e-45 159
MS.gene73861.t1 AT2G22930 39.506 81 49 0 360 440 207 287 3.49e-14 73.2
MS.gene73861.t1 AT1G73880 25.581 473 293 16 2 443 24 468 5.60e-34 133
MS.gene73861.t1 AT2G31790 28.166 458 289 12 2 438 18 456 2.69e-33 130
MS.gene73861.t1 AT1G51210 26.866 402 242 12 2 382 30 400 6.24e-32 126
MS.gene73861.t1 AT5G03490 25.173 433 286 12 2 419 29 438 3.09e-31 125
MS.gene73861.t1 AT3G53150 26.531 490 302 18 2 443 32 511 5.41e-30 122
MS.gene73861.t1 AT2G36760 26.446 484 297 18 2 443 24 490 7.59e-29 119
MS.gene73861.t1 AT5G12890 25.333 450 295 15 2 421 20 458 4.42e-28 116
MS.gene73861.t1 AT2G15480 25.934 455 287 14 2 420 20 460 4.79e-28 116
MS.gene73861.t1 AT1G05680 26.304 441 273 16 2 418 16 428 1.67e-27 114
MS.gene73861.t1 AT2G36780 26.518 494 284 18 2 443 24 490 2.95e-27 114
MS.gene73861.t1 AT2G31750 24.101 473 299 13 2 444 18 460 5.13e-27 113
MS.gene73861.t1 AT2G15480 26.042 480 303 15 2 445 20 483 7.50e-27 112
MS.gene73861.t1 AT2G31750 23.820 466 297 12 2 438 18 454 8.98e-27 112
MS.gene73861.t1 AT1G05675 25.792 442 274 17 2 418 16 428 2.57e-26 111
MS.gene73861.t1 AT1G10400 25.268 467 296 18 2 435 17 463 4.45e-26 110
MS.gene73861.t1 AT2G15490 25.280 447 288 13 2 414 17 451 4.85e-26 110
MS.gene73861.t1 AT2G16890 23.769 467 321 15 2 446 19 472 8.94e-26 109
MS.gene73861.t1 AT3G46670 25.234 428 293 13 2 421 19 427 1.13e-25 109
MS.gene73861.t1 AT2G15490 25.333 450 287 14 2 414 17 454 1.33e-25 109
MS.gene73861.t1 AT4G34138 26.458 480 288 16 2 440 21 476 2.17e-25 108
MS.gene73861.t1 AT2G18570 29.119 261 168 6 186 430 197 456 3.82e-25 107
MS.gene73861.t1 AT4G34131 35.359 181 109 3 245 420 281 458 6.06e-25 107
MS.gene73861.t1 AT5G59580 29.057 265 178 5 180 439 189 448 9.24e-25 106
MS.gene73861.t1 AT2G36750 25.996 477 307 17 2 443 20 485 9.47e-25 107
MS.gene73861.t1 AT2G36770 25.959 443 287 14 2 411 24 458 2.21e-24 105
MS.gene73861.t1 AT4G36770 31.818 220 134 4 226 430 237 455 8.31e-24 103
MS.gene73861.t1 AT2G29730 29.839 248 156 7 184 421 202 441 9.04e-24 103
MS.gene73861.t1 AT4G34135 25.282 443 273 15 2 411 21 438 1.64e-23 103
MS.gene73861.t1 AT4G15280 31.405 242 140 7 225 446 275 510 1.92e-23 103
MS.gene73861.t1 AT4G15280 31.405 242 140 7 225 446 243 478 2.31e-23 102
MS.gene73861.t1 AT2G29710 32.258 248 147 8 186 421 203 441 4.53e-23 101
MS.gene73861.t1 AT5G59590 28.063 253 172 5 187 434 198 445 6.42e-23 101
MS.gene73861.t1 AT2G16890 23.614 415 288 12 2 397 19 423 6.99e-23 100
MS.gene73861.t1 AT1G07250 30.385 260 166 7 194 440 217 474 8.19e-23 101
MS.gene73861.t1 AT2G36800 33.929 224 133 6 233 443 268 489 8.50e-23 101
MS.gene73861.t1 AT3G53160 32.243 214 126 5 245 443 275 484 8.98e-23 100
MS.gene73861.t1 AT4G01070 28.514 249 158 5 183 419 204 444 1.31e-22 100
MS.gene73861.t1 AT3G50740 24.944 445 285 14 1 411 16 445 1.65e-22 100
MS.gene73861.t1 AT2G18560 25.630 238 164 4 194 418 115 352 2.48e-22 98.6
MS.gene73861.t1 AT4G15260 27.817 284 174 7 183 443 81 356 3.09e-22 98.2
MS.gene73861.t1 AT1G01420 29.719 249 154 5 183 419 204 443 3.31e-22 99.4
MS.gene73861.t1 AT1G01420 29.719 249 154 5 183 419 207 446 3.37e-22 99.4
MS.gene73861.t1 AT3G11340 27.848 237 162 5 190 421 195 427 1.85e-21 96.7
MS.gene73861.t1 AT3G21780 27.465 284 177 7 181 440 192 470 2.11e-21 97.1
MS.gene73861.t1 AT3G21790 27.138 269 174 4 187 434 207 474 2.14e-21 97.1
MS.gene73861.t1 AT5G05880 25.783 415 260 15 2 396 18 404 2.44e-21 96.7
MS.gene73861.t1 AT2G43820 25.870 460 290 15 2 439 17 447 3.36e-21 95.9
MS.gene73861.t1 AT5G05870 25.106 470 296 17 2 443 18 459 4.13e-21 95.9
MS.gene73861.t1 AT2G30150 28.244 262 166 6 191 442 207 456 4.52e-21 95.9
MS.gene73861.t1 AT5G66690 24.211 475 301 17 1 440 16 466 5.06e-21 95.9
MS.gene73861.t1 AT2G30150 28.244 262 166 6 191 442 191 440 5.38e-21 95.5
MS.gene73861.t1 AT2G36970 29.365 252 161 7 175 421 210 449 6.31e-21 95.5
MS.gene73861.t1 AT1G30530 28.736 261 171 7 186 443 204 452 9.57e-21 94.7
MS.gene73861.t1 AT5G26310 24.532 481 292 19 1 440 16 466 9.74e-21 94.7
MS.gene73861.t1 AT3G21560 25.167 449 284 16 2 419 22 449 1.36e-20 94.7
MS.gene73861.t1 AT3G46700 23.094 459 303 15 1 443 18 442 1.41e-20 94.4
MS.gene73861.t1 AT3G21760 29.148 223 137 4 221 423 244 465 1.49e-20 94.4
MS.gene73861.t1 AT3G16520 30.286 175 118 1 245 415 263 437 4.03e-20 92.8
MS.gene73861.t1 AT1G05530 24.494 445 283 16 2 420 15 432 4.88e-20 92.4
MS.gene73861.t1 AT3G16520 30.286 175 118 1 245 415 263 437 5.21e-20 92.4
MS.gene73861.t1 AT3G16520 30.286 175 118 1 245 415 263 437 6.11e-20 92.4
MS.gene73861.t1 AT5G05860 28.926 242 154 6 193 429 201 429 6.79e-20 92.0
MS.gene73861.t1 AT5G14860 23.382 479 286 18 2 430 18 465 1.32e-19 91.7
MS.gene73861.t1 AT2G30140 23.653 427 298 10 2 420 23 429 1.67e-19 90.9
MS.gene73861.t1 AT3G46660 31.553 206 129 6 220 421 237 434 2.54e-19 90.5
MS.gene73861.t1 AT2G29740 30.045 223 142 6 193 404 221 440 2.78e-19 90.5
MS.gene73861.t1 AT4G15500 28.440 218 137 5 175 382 194 402 4.36e-19 89.7
MS.gene73861.t1 AT3G46680 28.629 248 160 6 186 429 197 431 4.40e-19 89.7
MS.gene73861.t1 AT1G06000 22.488 418 257 10 2 397 20 392 4.58e-19 89.4
MS.gene73861.t1 AT4G14090 22.247 454 289 14 2 427 23 440 5.75e-19 89.4
MS.gene73861.t1 AT4G15480 28.384 229 144 7 163 382 201 418 7.13e-19 89.4
MS.gene73861.t1 AT2G36790 35.393 178 104 3 245 411 280 457 9.04e-19 89.0
MS.gene73861.t1 AT2G30140 23.832 428 295 12 2 420 23 428 9.07e-19 89.0
MS.gene73861.t1 AT1G07240 27.863 262 170 7 174 421 202 458 9.42e-19 89.0
MS.gene73861.t1 AT3G21800 28.279 244 152 6 183 411 199 434 1.04e-18 88.6
MS.gene73861.t1 AT4G15550 23.831 449 292 19 2 420 23 451 1.68e-18 88.2
MS.gene73861.t1 AT3G21750 28.837 215 136 4 220 422 232 441 1.71e-18 88.2
MS.gene73861.t1 AT4G15490 22.772 404 274 12 2 382 18 406 2.87e-18 87.4
MS.gene73861.t1 AT1G01390 27.897 233 147 5 226 439 238 468 3.13e-18 87.4
MS.gene73861.t1 AT1G01390 30.102 196 118 4 226 404 255 448 3.85e-18 87.0
MS.gene73861.t1 AT2G43840 27.113 284 174 10 178 439 175 447 4.93e-18 86.7
MS.gene73861.t1 AT5G05890 27.586 203 140 4 183 380 196 396 5.07e-18 86.7
MS.gene73861.t1 AT1G07260 27.451 255 168 7 201 444 226 474 7.63e-18 86.3
MS.gene73861.t1 AT2G43840 29.289 239 141 8 220 439 218 447 7.71e-18 85.9
MS.gene73861.t1 AT5G38040 24.449 454 302 16 2 438 20 449 7.85e-18 85.9
MS.gene73861.t1 AT3G22250 31.818 198 111 8 245 433 276 458 1.47e-17 85.1
MS.gene73861.t1 AT3G55710 34.177 158 97 4 245 400 263 415 2.66e-17 84.3
MS.gene73861.t1 AT5G17030 26.996 263 173 9 186 442 207 456 2.78e-17 84.3
MS.gene73861.t1 AT5G05900 28.415 183 121 4 201 380 216 391 3.26e-17 84.0
MS.gene73861.t1 AT5G17050 25.738 237 162 6 186 420 210 434 3.83e-17 84.0
MS.gene73861.t1 AT3G46690 29.648 199 133 4 186 379 196 392 6.21e-17 83.2
MS.gene73861.t1 AT3G55700 28.395 243 159 8 199 434 212 446 7.56e-17 82.8
MS.gene73861.t1 AT2G29750 33.679 193 111 6 226 412 253 434 7.67e-17 83.2
MS.gene73861.t1 AT2G23250 24.129 402 247 15 2 380 8 374 9.25e-17 82.4
MS.gene73861.t1 AT1G05560 27.917 240 146 8 218 435 268 502 1.15e-16 82.8
MS.gene73861.t1 AT2G28080 22.482 427 283 13 2 400 28 434 1.38e-16 82.4
MS.gene73861.t1 AT1G05560 27.917 240 146 8 218 435 218 452 1.49e-16 82.0
MS.gene73861.t1 AT5G38010 26.613 248 153 7 194 431 209 437 1.08e-15 79.3
MS.gene73861.t1 AT1G78270 26.201 229 154 6 207 432 256 472 1.35e-15 79.3
MS.gene73861.t1 AT3G46720 30.097 206 121 6 214 412 223 412 3.65e-15 77.8
MS.gene73861.t1 AT1G22360 27.953 254 155 8 183 420 213 454 5.59e-15 77.4
MS.gene73861.t1 AT5G17040 25.095 263 180 7 186 443 191 441 6.36e-15 77.0
MS.gene73861.t1 AT5G17040 25.095 263 180 7 186 443 89 339 6.76e-15 76.3
MS.gene73861.t1 AT2G23260 24.494 445 271 20 2 416 20 429 7.07e-15 77.0
MS.gene73861.t1 AT2G26480 25.703 249 159 9 192 429 194 427 1.38e-14 75.9
MS.gene73861.t1 AT1G22360 29.577 213 128 6 183 379 213 419 1.74e-14 75.9
MS.gene73861.t1 AT1G24100 28.814 177 117 4 245 420 268 436 3.73e-14 74.7
MS.gene73861.t1 AT1G22400 28.169 213 135 6 181 379 215 423 1.53e-13 72.8
MS.gene73861.t1 AT1G22380 28.311 219 135 7 183 383 216 430 1.58e-13 72.8
MS.gene73861.t1 AT3G02100 21.622 444 298 15 2 422 23 439 5.12e-13 71.2
MS.gene73861.t1 AT1G22340 25.000 224 149 6 174 381 205 425 2.99e-12 68.9
MS.gene73861.t1 AT3G46650 27.136 199 139 4 186 380 180 376 3.66e-12 68.6
MS.gene73861.t1 AT1G22370 25.871 201 133 3 188 379 54 247 1.29e-11 65.9
MS.gene73861.t1 AT1G22370 25.743 202 134 3 187 379 223 417 2.03e-11 66.2

Find 85 sgRNAs with CRISPR-Local

Find 103 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGATTGAATGGTTCTAATT+TGG 0.153688 4.2:-31019306 None:intergenic
GGTTCAGCAACAATTGATTT+TGG 0.174430 4.2:+31020171 MS.gene73861:CDS
ATCAGTTCTTGAAATATATT+TGG 0.192558 4.2:-31020013 None:intergenic
TCATCCTAGCATTCAATATT+TGG 0.196413 4.2:-31020297 None:intergenic
GAAGGAAGAGGTGTTGTTTA+TGG 0.254621 4.2:+31020142 MS.gene73861:CDS
TGAAAACTCAAATTATGTTT+TGG 0.278513 4.2:+31019907 MS.gene73861:CDS
AATTTGGATTGTGCTGATTT+AGG 0.284535 4.2:-31019290 None:intergenic
TTAAATAAAGCTGATGCATT+AGG 0.289314 4.2:+31019785 MS.gene73861:CDS
TTCATTACACATTGTGGTTC+AGG 0.292499 4.2:+31020214 MS.gene73861:CDS
ACCCTTTCTGAAAACCCTTC+TGG 0.317348 4.2:-31020118 None:intergenic
AACAAACCGGTTCTTACTTC+AGG 0.319890 4.2:+31019866 MS.gene73861:CDS
TGCTGATTTAGGTGTGAAAA+AGG 0.334195 4.2:-31019279 None:intergenic
TCAGCTGTTGTTTCTGCATT+GGG 0.338121 4.2:-31019386 None:intergenic
GATCTAATGCAACCTCCTTC+TGG 0.343568 4.2:+31019650 MS.gene73861:CDS
GAGGTGTTGTTTATGGTGGT+TGG 0.345051 4.2:+31020149 MS.gene73861:CDS
TCAGTTGTTTATTGTTGTTT+TGG 0.347474 4.2:+31019971 MS.gene73861:CDS
CCTAAACGCTTGGTTATAGA+TGG 0.354201 4.2:-31019530 None:intergenic
GCAGCATTGAAACCTCCTTT+TGG 0.370405 4.2:+31020070 MS.gene73861:CDS
AATATTTGGTCACCAACATT+TGG 0.377355 4.2:-31020283 None:intergenic
CTAGGTGAAGGAATGGAGTT+TGG 0.378096 4.2:-31019223 None:intergenic
ATCAGCTGTTGTTTCTGCAT+TGG 0.387550 4.2:-31019387 None:intergenic
AGGTGTTGTTTATGGTGGTT+GGG 0.398981 4.2:+31020150 MS.gene73861:CDS
AATTGAGGGTGGAGATTGAA+TGG 0.406509 4.2:-31019317 None:intergenic
ATTATTAGTTCAATCATGAT+TGG 0.409590 4.2:+31019575 MS.gene73861:CDS
CCATCTATAACCAAGCGTTT+AGG 0.409979 4.2:+31019530 MS.gene73861:CDS
AGGTTGCATTAGATCAAATT+CGG 0.423550 4.2:-31019642 None:intergenic
ATTGGTGAATAAGTGTCAAT+TGG 0.433255 4.2:+31020252 MS.gene73861:CDS
AATATTGAATGCTAGGATGA+TGG 0.436105 4.2:+31020300 MS.gene73861:CDS
TCAGAAAGGGTTGAAGGAAG+AGG 0.439583 4.2:+31020130 MS.gene73861:CDS
TTCAACATGAGGAACTTTGA+TGG 0.446054 4.2:-31019354 None:intergenic
ATCAAAGTTCCTCATGTTGA+AGG 0.446405 4.2:+31019356 MS.gene73861:CDS
TTTCAATGTCAGGTTGAGTA+AGG 0.452256 4.2:-31019451 None:intergenic
TCAATTGTTTCGAATCCAAA+AGG 0.468326 4.2:-31020085 None:intergenic
ATCAGCTTTATTTAAAGCAA+TGG 0.476000 4.2:-31019777 None:intergenic
ACAGAAACAGTTTAACAAAC+CGG 0.476272 4.2:+31019853 MS.gene73861:CDS
AGCTTTGATGCCTAAACGCT+TGG 0.479538 4.2:-31019540 None:intergenic
ATGTGTGGATGTAAAGGATA+AGG 0.483836 4.2:-31019413 None:intergenic
GTGAGATGAGTTTCAATGTC+AGG 0.487175 4.2:-31019461 None:intergenic
TTGAAGAAGCATTGCCAGAA+GGG 0.495126 4.2:+31020104 MS.gene73861:CDS
CAAGTTTGTTTGCTAGGTGA+AGG 0.495613 4.2:-31019235 None:intergenic
CTGTTGTTTCTGCATTGGGA+GGG 0.497461 4.2:-31019382 None:intergenic
TTGTTTGCTAGGTGAAGGAA+TGG 0.498843 4.2:-31019230 None:intergenic
AGCACCAGCTAGATATTCAC+AGG 0.507086 4.2:+31019607 MS.gene73861:CDS
ACTGGTCCTGAAGTAAGAAC+CGG 0.507545 4.2:-31019872 None:intergenic
AGGTTCTTTATCAGAGGCAT+TGG 0.508110 4.2:+31020234 MS.gene73861:CDS
AAGCTTCAAGAGATTGTTGA+GGG 0.510278 4.2:+31020523 MS.gene73861:CDS
ATATTTCAAGAACTGATGCT+TGG 0.514284 4.2:+31020019 MS.gene73861:CDS
GTGACCAAATATTGAATGCT+AGG 0.519212 4.2:+31020293 MS.gene73861:CDS
GTGATAAAAGTGATTAATTG+AGG 0.523297 4.2:-31019332 None:intergenic
AAGACATGCAGAGAAATTGA+AGG 0.536699 4.2:+31019812 MS.gene73861:CDS
GCTGTTGTTTCTGCATTGGG+AGG 0.537219 4.2:-31019383 None:intergenic
ATATTGAATGCTAGGATGAT+GGG 0.537737 4.2:+31020301 MS.gene73861:CDS
TGAAGATGGATTATATACTA+AGG 0.538505 4.2:+31020360 MS.gene73861:CDS
TTACCCTGTGAATATCTAGC+TGG 0.539689 4.2:-31019611 None:intergenic
GAAGTTGAGAAAGGTGAAGA+TGG 0.541718 4.2:+31020346 MS.gene73861:CDS
TGGTTCAGGTTCTTTATCAG+AGG 0.546855 4.2:+31020228 MS.gene73861:CDS
TTCTGTATGTAATCAAGATA+AGG 0.552567 4.2:-31019836 None:intergenic
GGATGTTTCATTACACATTG+TGG 0.554201 4.2:+31020208 MS.gene73861:CDS
CAACCTCCTTCTGGTTACCC+TGG 0.554539 4.2:+31019659 MS.gene73861:CDS
GTCATGATGTGTGGATGTAA+AGG 0.555238 4.2:-31019419 None:intergenic
GGAAGAGGTGTTGTTTATGG+TGG 0.567575 4.2:+31020145 MS.gene73861:CDS
GGTGAAGGAATGGAGTTTGG+TGG 0.568326 4.2:-31019220 None:intergenic
TAAAAGTGATTAATTGAGGG+TGG 0.570792 4.2:-31019328 None:intergenic
ATGGGAAACAACTTGAAAGT+TGG 0.577450 4.2:+31020319 MS.gene73861:CDS
ATTGAAGAAGCATTGCCAGA+AGG 0.578335 4.2:+31020103 MS.gene73861:CDS
TGTGTGGATGTAAAGGATAA+GGG 0.586933 4.2:-31019412 None:intergenic
TCCATGGCTGTCATGATGTG+TGG 0.587159 4.2:-31019428 None:intergenic
ATGCTTGGTCTTGATATGAC+TGG 0.589215 4.2:+31020034 MS.gene73861:CDS
TGAAGCTTGATTGATGAACC+AGG 0.595000 4.2:-31019677 None:intergenic
ATTGTTTCGAATCCAAAAGG+AGG 0.604163 4.2:-31020082 None:intergenic
TCCACACATCATGACAGCCA+TGG 0.616562 4.2:+31019427 MS.gene73861:CDS
TGATAAAAGTGATTAATTGA+GGG 0.618180 4.2:-31019331 None:intergenic
TAAGGATAATGTTTGTAAAG+CGG 0.619636 4.2:+31020378 MS.gene73861:CDS
GTCAGGTTGAGTAAGGTCCA+TGG 0.630077 4.2:-31019444 None:intergenic
GTAATGAAACATCCCACAGA+AGG 0.631699 4.2:-31020199 None:intergenic
GTTGGTGTGGAAGTTGAGAA+AGG 0.632484 4.2:+31020337 MS.gene73861:CDS
GAAGCTTCAAGAGATTGTTG+AGG 0.642756 4.2:+31020522 MS.gene73861:CDS
GATGAACCAGGGTAACCAGA+AGG 0.655637 4.2:-31019665 None:intergenic
AAATCATAGAAAACAATGTG+AGG 0.663978 4.2:-31019494 None:intergenic
GGAGGGAGACCTTCAACATG+AGG 0.665218 4.2:-31019365 None:intergenic
AAACAACTTGAAAGTTGGTG+TGG 0.672740 4.2:+31020324 MS.gene73861:CDS
GAAGCTTGATTGATGAACCA+GGG 0.688664 4.2:-31019676 None:intergenic
GAACCAGGGTAACCAGAAGG+AGG 0.689649 4.2:-31019662 None:intergenic
GAGCATTGTGATGAATGATG+AGG 0.741482 4.2:+31020402 MS.gene73861:CDS
GCACCAGCTAGATATTCACA+GGG 0.745352 4.2:+31019608 MS.gene73861:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATCAGTTCTTGAAATATATT+TGG - chr4.2:31020016-31020035 None:intergenic 20.0%
!! ATTATTAGTTCAATCATGAT+TGG + chr4.2:31019575-31019594 MS.gene73861:CDS 20.0%
!! TGATAAAAGTGATTAATTGA+GGG - chr4.2:31019334-31019353 None:intergenic 20.0%
!!! ATTATGTTTTGGATGAAAAA+TGG + chr4.2:31019918-31019937 MS.gene73861:CDS 20.0%
!!! TAATTTGAGTTTTCAAGTAT+CGG - chr4.2:31019902-31019921 None:intergenic 20.0%
!!! TGAAAACTCAAATTATGTTT+TGG + chr4.2:31019907-31019926 MS.gene73861:CDS 20.0%
!!! TTATGTTTTGGATGAAAAAT+GGG + chr4.2:31019919-31019938 MS.gene73861:CDS 20.0%
! AAATCATAGAAAACAATGTG+AGG - chr4.2:31019497-31019516 None:intergenic 25.0%
! GTGATAAAAGTGATTAATTG+AGG - chr4.2:31019335-31019354 None:intergenic 25.0%
! TAAGGATAATGTTTGTAAAG+CGG + chr4.2:31020378-31020397 MS.gene73861:CDS 25.0%
! TTAAATAAAGCTGATGCATT+AGG + chr4.2:31019785-31019804 MS.gene73861:CDS 25.0%
! TTCTGTATGTAATCAAGATA+AGG - chr4.2:31019839-31019858 None:intergenic 25.0%
!! TTTTCTATGATTTCACACAT+TGG + chr4.2:31019504-31019523 MS.gene73861:CDS 25.0%
!!! ATCAGCTTTATTTAAAGCAA+TGG - chr4.2:31019780-31019799 None:intergenic 25.0%
!!! TCAGTTGTTTATTGTTGTTT+TGG + chr4.2:31019971-31019990 MS.gene73861:CDS 25.0%
!!! TGAAGATGGATTATATACTA+AGG + chr4.2:31020360-31020379 MS.gene73861:CDS 25.0%
AATATTGAATGCTAGGATGA+TGG + chr4.2:31020300-31020319 MS.gene73861:CDS 30.0%
AATATTTGGTCACCAACATT+TGG - chr4.2:31020286-31020305 None:intergenic 30.0%
ACAGAAACAGTTTAACAAAC+CGG + chr4.2:31019853-31019872 MS.gene73861:CDS 30.0%
AGGTTGCATTAGATCAAATT+CGG - chr4.2:31019645-31019664 None:intergenic 30.0%
ATATTGAATGCTAGGATGAT+GGG + chr4.2:31020301-31020320 MS.gene73861:CDS 30.0%
ATATTTCAAGAACTGATGCT+TGG + chr4.2:31020019-31020038 MS.gene73861:CDS 30.0%
ATTGGTGAATAAGTGTCAAT+TGG + chr4.2:31020252-31020271 MS.gene73861:CDS 30.0%
GCAAACAAACTTGCAAAAAA+AGG + chr4.2:31019245-31019264 MS.gene73861:CDS 30.0%
TAAAAGTGATTAATTGAGGG+TGG - chr4.2:31019331-31019350 None:intergenic 30.0%
TCAATTGTTTCGAATCCAAA+AGG - chr4.2:31020088-31020107 None:intergenic 30.0%
TCATCCTAGCATTCAATATT+TGG - chr4.2:31020300-31020319 None:intergenic 30.0%
!! AATTTGGATTGTGCTGATTT+AGG - chr4.2:31019293-31019312 None:intergenic 30.0%
!! GAGATTGAATGGTTCTAATT+TGG - chr4.2:31019309-31019328 None:intergenic 30.0%
!! TTTTTGCAAGTTTGTTTGCT+AGG - chr4.2:31019244-31019263 None:intergenic 30.0%
!!! TTTTCAAGTATCGGTAAAAC+TGG - chr4.2:31019893-31019912 None:intergenic 30.0%
AAGACATGCAGAGAAATTGA+AGG + chr4.2:31019812-31019831 MS.gene73861:CDS 35.0%
AAGCTTCAAGAGATTGTTGA+GGG + chr4.2:31020523-31020542 MS.gene73861:CDS 35.0%
ATCAAAGTTCCTCATGTTGA+AGG + chr4.2:31019356-31019375 MS.gene73861:CDS 35.0%
ATGGGAAACAACTTGAAAGT+TGG + chr4.2:31020319-31020338 MS.gene73861:CDS 35.0%
ATGTGTGGATGTAAAGGATA+AGG - chr4.2:31019416-31019435 None:intergenic 35.0%
ATTGTTTCGAATCCAAAAGG+AGG - chr4.2:31020085-31020104 None:intergenic 35.0%
GCTATGAGGAAAAACACTTA+TGG + chr4.2:31019725-31019744 MS.gene73861:CDS 35.0%
GGATGTTTCATTACACATTG+TGG + chr4.2:31020208-31020227 MS.gene73861:CDS 35.0%
GGTTTCAATGCTGCAAAAAA+TGG - chr4.2:31020064-31020083 None:intergenic 35.0%
GTGACCAAATATTGAATGCT+AGG + chr4.2:31020293-31020312 MS.gene73861:CDS 35.0%
TGTGTGGATGTAAAGGATAA+GGG - chr4.2:31019415-31019434 None:intergenic 35.0%
TTCAACATGAGGAACTTTGA+TGG - chr4.2:31019357-31019376 None:intergenic 35.0%
TTCATTACACATTGTGGTTC+AGG + chr4.2:31020214-31020233 MS.gene73861:CDS 35.0%
!! AAACAACTTGAAAGTTGGTG+TGG + chr4.2:31020324-31020343 MS.gene73861:CDS 35.0%
!! GGTTCAGCAACAATTGATTT+TGG + chr4.2:31020171-31020190 MS.gene73861:CDS 35.0%
!! TGCTGATTTAGGTGTGAAAA+AGG - chr4.2:31019282-31019301 None:intergenic 35.0%
!! TTTCAATGTCAGGTTGAGTA+AGG - chr4.2:31019454-31019473 None:intergenic 35.0%
!!! ATTTTGGAACATCCTTCTGT+GGG + chr4.2:31020187-31020206 MS.gene73861:CDS 35.0%
!!! TTGGTTTTGTTGCCAAATGT+TGG + chr4.2:31020271-31020290 MS.gene73861:CDS 35.0%
AATTGAGGGTGGAGATTGAA+TGG - chr4.2:31019320-31019339 None:intergenic 40.0%
CCATCTATAACCAAGCGTTT+AGG + chr4.2:31019530-31019549 MS.gene73861:CDS 40.0%
CCTAAACGCTTGGTTATAGA+TGG - chr4.2:31019533-31019552 None:intergenic 40.0%
GAAGCTTCAAGAGATTGTTG+AGG + chr4.2:31020522-31020541 MS.gene73861:CDS 40.0%
GAAGCTTGATTGATGAACCA+GGG - chr4.2:31019679-31019698 None:intergenic 40.0%
GAAGTTGAGAAAGGTGAAGA+TGG + chr4.2:31020346-31020365 MS.gene73861:CDS 40.0%
GTAATGAAACATCCCACAGA+AGG - chr4.2:31020202-31020221 None:intergenic 40.0%
GTCATGATGTGTGGATGTAA+AGG - chr4.2:31019422-31019441 None:intergenic 40.0%
GTGAGATGAGTTTCAATGTC+AGG - chr4.2:31019464-31019483 None:intergenic 40.0%
TGAAGCTTGATTGATGAACC+AGG - chr4.2:31019680-31019699 None:intergenic 40.0%
TTACCCTGTGAATATCTAGC+TGG - chr4.2:31019614-31019633 None:intergenic 40.0%
! AACAAACCGGTTCTTACTTC+AGG + chr4.2:31019866-31019885 MS.gene73861:CDS 40.0%
! AGGTTCTTTATCAGAGGCAT+TGG + chr4.2:31020234-31020253 MS.gene73861:CDS 40.0%
! CAAAAGCTTTTGCTGCTATG+AGG + chr4.2:31019711-31019730 MS.gene73861:CDS 40.0%
! CAAGTTTGTTTGCTAGGTGA+AGG - chr4.2:31019238-31019257 None:intergenic 40.0%
! GAGCATTGTGATGAATGATG+AGG + chr4.2:31020402-31020421 MS.gene73861:CDS 40.0%
! TGGTTCAGGTTCTTTATCAG+AGG + chr4.2:31020228-31020247 MS.gene73861:CDS 40.0%
! TTGTTTGCTAGGTGAAGGAA+TGG - chr4.2:31019233-31019252 None:intergenic 40.0%
!! AGGTGTTGTTTATGGTGGTT+GGG + chr4.2:31020150-31020169 MS.gene73861:CDS 40.0%
!! ATCAGCTGTTGTTTCTGCAT+TGG - chr4.2:31019390-31019409 None:intergenic 40.0%
!! ATGCTTGGTCTTGATATGAC+TGG + chr4.2:31020034-31020053 MS.gene73861:CDS 40.0%
!! ATTGAAGAAGCATTGCCAGA+AGG + chr4.2:31020103-31020122 MS.gene73861:CDS 40.0%
!! GAAGGAAGAGGTGTTGTTTA+TGG + chr4.2:31020142-31020161 MS.gene73861:CDS 40.0%
!! TCAGCTGTTGTTTCTGCATT+GGG - chr4.2:31019389-31019408 None:intergenic 40.0%
!! TGGATGAAAAATGGGCTACT+TGG + chr4.2:31019927-31019946 MS.gene73861:CDS 40.0%
!! TTGAAGAAGCATTGCCAGAA+GGG + chr4.2:31020104-31020123 MS.gene73861:CDS 40.0%
!!! GATTTTGGAACATCCTTCTG+TGG + chr4.2:31020186-31020205 MS.gene73861:CDS 40.0%
ACTGGTCCTGAAGTAAGAAC+CGG - chr4.2:31019875-31019894 None:intergenic 45.0%
AGCACCAGCTAGATATTCAC+AGG + chr4.2:31019607-31019626 MS.gene73861:CDS 45.0%
CTAGGTGAAGGAATGGAGTT+TGG - chr4.2:31019226-31019245 None:intergenic 45.0%
GATCTAATGCAACCTCCTTC+TGG + chr4.2:31019650-31019669 MS.gene73861:CDS 45.0%
GCACCAGCTAGATATTCACA+GGG + chr4.2:31019608-31019627 MS.gene73861:CDS 45.0%
GTTGGTGTGGAAGTTGAGAA+AGG + chr4.2:31020337-31020356 MS.gene73861:CDS 45.0%
TCAGAAAGGGTTGAAGGAAG+AGG + chr4.2:31020130-31020149 MS.gene73861:CDS 45.0%
! ACCCTTTCTGAAAACCCTTC+TGG - chr4.2:31020121-31020140 None:intergenic 45.0%
! AGCTTTGATGCCTAAACGCT+TGG - chr4.2:31019543-31019562 None:intergenic 45.0%
! GCCAGAAGGGTTTTCAGAAA+GGG + chr4.2:31020117-31020136 MS.gene73861:CDS 45.0%
! GGGTTTTCAGAAAGGGTTGA+AGG + chr4.2:31020124-31020143 MS.gene73861:CDS 45.0%
! TGCCAGAAGGGTTTTCAGAA+AGG + chr4.2:31020116-31020135 MS.gene73861:CDS 45.0%
!! CTGTTGTTTCTGCATTGGGA+GGG - chr4.2:31019385-31019404 None:intergenic 45.0%
!! GAAAAATGGGCTACTTGGCT+TGG + chr4.2:31019932-31019951 MS.gene73861:CDS 45.0%
!! GAGGTGTTGTTTATGGTGGT+TGG + chr4.2:31020149-31020168 MS.gene73861:CDS 45.0%
!! GCAGCATTGAAACCTCCTTT+TGG + chr4.2:31020070-31020089 MS.gene73861:CDS 45.0%
!! GGAAGAGGTGTTGTTTATGG+TGG + chr4.2:31020145-31020164 MS.gene73861:CDS 45.0%
GATGAACCAGGGTAACCAGA+AGG - chr4.2:31019668-31019687 None:intergenic 50.0%
GGTGAAGGAATGGAGTTTGG+TGG - chr4.2:31019223-31019242 None:intergenic 50.0%
TCCACACATCATGACAGCCA+TGG + chr4.2:31019427-31019446 MS.gene73861:CDS 50.0%
TCCATGGCTGTCATGATGTG+TGG - chr4.2:31019431-31019450 None:intergenic 50.0%
!! GCTGTTGTTTCTGCATTGGG+AGG - chr4.2:31019386-31019405 None:intergenic 50.0%
!! GTCAGGTTGAGTAAGGTCCA+TGG - chr4.2:31019447-31019466 None:intergenic 50.0%
GAACCAGGGTAACCAGAAGG+AGG - chr4.2:31019665-31019684 None:intergenic 55.0%
GGAGGGAGACCTTCAACATG+AGG - chr4.2:31019368-31019387 None:intergenic 55.0%
! CAACCTCCTTCTGGTTACCC+TGG + chr4.2:31019659-31019678 MS.gene73861:CDS 55.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 31019215 31020555 31019215 ID=MS.gene73861
chr4.2 mRNA 31019215 31020555 31019215 ID=MS.gene73861.t1;Parent=MS.gene73861
chr4.2 exon 31019215 31020555 31019215 ID=MS.gene73861.t1.exon1;Parent=MS.gene73861.t1
chr4.2 CDS 31019215 31020555 31019215 ID=cds.MS.gene73861.t1;Parent=MS.gene73861.t1
Gene Sequence

>MS.gene73861

ATGGGCCACCAAACTCCATTCCTTCACCTAGCAAACAAACTTGCAAAAAAAGGTCACAAAATCACCTTTTTCACACCTAAATCAGCACAATCCAAATTAGAACCATTCAATCTCCACCCTCAATTAATCACTTTTATCACCATCAAAGTTCCTCATGTTGAAGGTCTCCCTCCCAATGCAGAAACAACAGCTGATGTCCCTTATCCTTTACATCCACACATCATGACAGCCATGGACCTTACTCAACCTGACATTGAAACTCATCTCACAAATCTCAAACCTCACATTGTTTTCTATGATTTCACACATTGGATTCCATCTATAACCAAGCGTTTAGGCATCAAAGCTTTTCATTATTGCATTATTAGTTCAATCATGATTGGTTACACTCTAGCACCAGCTAGATATTCACAGGGTAAAGATTTAACCGAATTTGATCTAATGCAACCTCCTTCTGGTTACCCTGGTTCATCAATCAAGCTTCATATTCATGAAGCAAAAGCTTTTGCTGCTATGAGGAAAAACACTTATGGTAGCAATATTCTTTTCTATGATCGACAAGCCATTGCTTTAAATAAAGCTGATGCATTAGGATACAAGACATGCAGAGAAATTGAAGGACCTTATCTTGATTACATACAGAAACAGTTTAACAAACCGGTTCTTACTTCAGGACCAGTTTTACCGATACTTGAAAACTCAAATTATGTTTTGGATGAAAAATGGGCTACTTGGCTTGGTAGATTCAAAACAGATTCAGTTGTTTATTGTTGTTTTGGAAGTGAATGTGTTTTAAAGCCAAATATATTTCAAGAACTGATGCTTGGTCTTGATATGACTGGTATGCCATTTTTTGCAGCATTGAAACCTCCTTTTGGATTCGAAACAATTGAAGAAGCATTGCCAGAAGGGTTTTCAGAAAGGGTTGAAGGAAGAGGTGTTGTTTATGGTGGTTGGGTTCAGCAACAATTGATTTTGGAACATCCTTCTGTGGGATGTTTCATTACACATTGTGGTTCAGGTTCTTTATCAGAGGCATTGGTGAATAAGTGTCAATTGGTTTTGTTGCCAAATGTTGGTGACCAAATATTGAATGCTAGGATGATGGGAAACAACTTGAAAGTTGGTGTGGAAGTTGAGAAAGGTGAAGATGGATTATATACTAAGGATAATGTTTGTAAAGCGGTGAGCATTGTGATGAATGATGAGGATGAAATCAGTAAGACAGTAAGAGCTAATCATGCTAAGATTAGAGAGATGTTGCTTAATAAAGATCTTGAGTCATCTTATATTGATAACTTCTGCATGAAGCTTCAAGAGATTGTTGAGGGAAAAAATTAA

Protein sequence

>MS.gene73861.t1

MGHQTPFLHLANKLAKKGHKITFFTPKSAQSKLEPFNLHPQLITFITIKVPHVEGLPPNAETTADVPYPLHPHIMTAMDLTQPDIETHLTNLKPHIVFYDFTHWIPSITKRLGIKAFHYCIISSIMIGYTLAPARYSQGKDLTEFDLMQPPSGYPGSSIKLHIHEAKAFAAMRKNTYGSNILFYDRQAIALNKADALGYKTCREIEGPYLDYIQKQFNKPVLTSGPVLPILENSNYVLDEKWATWLGRFKTDSVVYCCFGSECVLKPNIFQELMLGLDMTGMPFFAALKPPFGFETIEEALPEGFSERVEGRGVVYGGWVQQQLILEHPSVGCFITHCGSGSLSEALVNKCQLVLLPNVGDQILNARMMGNNLKVGVEVEKGEDGLYTKDNVCKAVSIVMNDEDEISKTVRANHAKIREMLLNKDLESSYIDNFCMKLQEIVEGKN