AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene073193


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene073193.t1 MTR_2g083420 82.096 458 58 1 1 458 1 434 0.0 772
MS.gene073193.t1 MTR_2g083480 81.441 458 85 0 1 458 1 458 0.0 764
MS.gene073193.t1 MTR_2g083390 81.223 458 62 1 1 458 1 434 0.0 763
MS.gene073193.t1 MTR_2g083430 76.856 458 106 0 1 458 1 458 0.0 699
MS.gene073193.t1 MTR_2g083380 65.066 458 160 0 1 458 18 475 0.0 605
MS.gene073193.t1 MTR_2g083490 64.629 458 162 0 1 458 1 458 0.0 602
MS.gene073193.t1 MTR_2g083360 68.874 453 36 4 6 458 27 374 0.0 585
MS.gene073193.t1 MTR_4g079270 60.652 460 177 3 1 458 1 458 0.0 575
MS.gene073193.t1 MTR_4g079250 60.652 460 177 3 1 458 1 458 0.0 572
MS.gene073193.t1 MTR_2g014900 56.763 451 194 1 8 458 7 456 0.0 523
MS.gene073193.t1 MTR_1g090270 41.957 460 249 11 7 457 14 464 2.82e-112 339
MS.gene073193.t1 MTR_2g086283 55.336 253 61 2 205 457 135 335 2.87e-87 270
MS.gene073193.t1 MTR_2g086283 61.314 137 52 1 11 147 1 136 2.64e-48 169
MS.gene073193.t1 MTR_4g059370 39.815 324 182 6 141 457 74 391 1.84e-76 244
MS.gene073193.t1 MTR_8g068330 31.224 474 300 14 1 458 1 464 4.88e-63 211
MS.gene073193.t1 MTR_8g068360 30.917 469 305 12 2 458 6 467 3.87e-61 206
MS.gene073193.t1 MTR_7g067330 30.670 463 265 15 2 451 3 422 8.80e-61 204
MS.gene073193.t1 MTR_8g068340 30.277 469 301 12 2 454 6 464 1.44e-59 202
MS.gene073193.t1 MTR_2g014930 41.522 289 89 5 17 305 9 217 1.74e-59 195
MS.gene073193.t1 MTR_7g067120 30.388 464 265 16 2 451 3 422 3.08e-59 201
MS.gene073193.t1 MTR_4g079280 45.175 228 80 3 11 238 1 183 9.58e-58 189
MS.gene073193.t1 MTR_2g008226 32.627 472 282 18 6 454 8 466 5.41e-57 196
MS.gene073193.t1 MTR_4g123553 30.454 463 290 16 6 454 13 457 5.35e-56 192
MS.gene073193.t1 MTR_2g008225 30.043 466 303 12 2 455 9 463 2.65e-55 191
MS.gene073193.t1 MTR_2g008220 29.764 467 303 13 2 455 8 462 1.95e-53 186
MS.gene073193.t1 MTR_6g036650 29.237 472 301 14 1 454 11 467 5.22e-52 182
MS.gene073193.t1 MTR_6g042310 29.741 464 290 16 7 454 17 460 2.55e-51 180
MS.gene073193.t1 MTR_2g083440 75.490 102 25 0 357 458 11 112 2.54e-49 164
MS.gene073193.t1 MTR_1g090280 44.231 208 104 5 261 457 108 314 7.13e-47 164
MS.gene073193.t1 MTR_2g046620 28.478 460 303 13 6 454 14 458 3.27e-46 166
MS.gene073193.t1 MTR_8g007650 31.674 442 270 15 7 428 6 435 6.46e-46 166
MS.gene073193.t1 MTR_8g007565 31.448 442 271 15 7 428 6 435 7.45e-46 166
MS.gene073193.t1 MTR_5g066410 29.909 438 258 13 11 427 1 410 7.38e-43 157
MS.gene073193.t1 MTR_4g077960 27.152 453 296 15 17 454 1 434 1.79e-40 150
MS.gene073193.t1 MTR_3g435310 26.535 456 273 14 2 450 12 412 6.37e-39 146
MS.gene073193.t1 MTR_8g071070 27.731 476 307 15 8 457 7 471 8.12e-35 135
MS.gene073193.t1 MTR_8g066610 27.848 474 298 18 1 443 1 461 2.06e-34 134
MS.gene073193.t1 MTR_0009s0240 27.407 405 270 12 8 397 7 402 3.07e-32 128
MS.gene073193.t1 MTR_6g023665 28.698 453 267 19 9 427 14 444 3.73e-31 125
MS.gene073193.t1 MTR_2g098430 24.835 455 307 14 9 437 7 452 3.72e-30 122
MS.gene073193.t1 MTR_5g087620 26.708 483 289 20 8 443 10 474 2.00e-29 120
MS.gene073193.t1 MTR_8g009055 28.571 469 263 17 7 434 5 442 2.64e-29 120
MS.gene073193.t1 MTR_8g027870 28.542 480 283 18 5 452 16 467 3.82e-29 119
MS.gene073193.t1 MTR_4g485590 28.780 410 232 16 8 394 9 381 5.66e-29 118
MS.gene073193.t1 MTR_4g031800 26.132 486 306 17 6 458 7 472 6.61e-29 119
MS.gene073193.t1 MTR_1g062380 26.144 459 294 16 7 428 15 465 8.58e-29 119
MS.gene073193.t1 MTR_8g027885 27.696 473 296 19 5 452 16 467 1.19e-28 118
MS.gene073193.t1 MTR_6g488280 28.825 451 269 19 9 427 7 437 1.91e-28 117
MS.gene073193.t1 MTR_0428s0010 28.825 451 269 19 9 427 7 437 1.91e-28 117
MS.gene073193.t1 MTR_8g009050 28.571 476 254 19 7 434 5 442 7.42e-28 115
MS.gene073193.t1 MTR_5g045970 27.371 464 281 18 7 428 15 464 1.79e-27 115
MS.gene073193.t1 MTR_8g465670 27.352 457 247 17 9 417 8 427 4.29e-27 113
MS.gene073193.t1 MTR_3g009510 32.719 217 127 4 236 436 241 454 4.89e-27 113
MS.gene073193.t1 MTR_0184s0030 37.500 208 107 6 237 425 234 437 5.89e-27 113
MS.gene073193.t1 MTR_7g070740 24.395 496 309 15 7 458 10 483 6.30e-27 113
MS.gene073193.t1 MTR_6g038200 25.708 459 274 19 8 436 11 432 1.13e-26 112
MS.gene073193.t1 MTR_0078s0060 35.000 200 112 5 253 440 253 446 3.06e-26 111
MS.gene073193.t1 MTR_8g006730 25.764 458 278 18 8 427 6 439 6.86e-26 110
MS.gene073193.t1 MTR_7g070660 23.810 483 323 16 7 457 10 479 7.25e-26 110
MS.gene073193.t1 MTR_7g117170 35.714 210 119 5 257 454 266 471 7.54e-26 110
MS.gene073193.t1 MTR_4g485620 25.216 464 281 15 20 443 1 438 1.01e-25 109
MS.gene073193.t1 MTR_8g009073 26.987 478 257 22 7 434 5 440 1.18e-25 109
MS.gene073193.t1 MTR_6g038220 24.236 458 289 18 8 440 11 435 1.57e-25 108
MS.gene073193.t1 MTR_0184s0040 35.052 194 112 5 253 436 269 458 2.02e-25 108
MS.gene073193.t1 MTR_0078s0190 35.052 194 112 5 253 436 269 458 2.02e-25 108
MS.gene073193.t1 MTR_4g485630 25.510 490 302 20 7 457 8 473 2.34e-25 108
MS.gene073193.t1 MTR_7g055710 23.899 477 299 15 7 440 10 465 4.67e-25 107
MS.gene073193.t1 MTR_7g102460 26.535 456 283 18 5 421 6 448 8.04e-25 107
MS.gene073193.t1 MTR_8g006270 28.623 276 167 9 167 428 178 437 1.24e-24 106
MS.gene073193.t1 MTR_7g117405 27.176 471 285 21 8 440 12 462 1.52e-24 106
MS.gene073193.t1 MTR_8g009073 34.419 215 123 6 234 434 101 311 1.65e-24 104
MS.gene073193.t1 MTR_7g070610 23.168 505 305 14 7 458 12 486 1.67e-24 106
MS.gene073193.t1 MTR_8g006220 25.813 461 257 16 9 417 7 434 1.77e-24 106
MS.gene073193.t1 MTR_7g046490 35.377 212 121 6 235 432 230 439 2.29e-24 105
MS.gene073193.t1 MTR_7g102550 23.967 484 316 18 8 452 9 479 2.45e-24 105
MS.gene073193.t1 MTR_6g033625 26.754 456 270 17 9 427 5 433 2.51e-24 105
MS.gene073193.t1 MTR_2g046820 33.478 230 139 6 236 454 236 462 3.78e-24 105
MS.gene073193.t1 MTR_8g466240 26.267 434 249 20 1 398 1 399 7.85e-24 103
MS.gene073193.t1 MTR_7g070910 22.607 491 333 12 3 458 6 484 1.04e-23 103
MS.gene073193.t1 MTR_6g038230 24.783 460 285 20 8 440 11 436 1.10e-23 103
MS.gene073193.t1 MTR_7g013220 25.109 458 296 19 8 444 5 436 1.41e-23 103
MS.gene073193.t1 MTR_6g033615 26.667 450 264 18 9 427 5 419 2.10e-23 102
MS.gene073193.t1 MTR_8g008990 28.661 478 253 23 7 434 5 444 2.18e-23 102
MS.gene073193.t1 MTR_0078s0010 35.417 192 110 5 253 434 254 441 2.20e-23 102
MS.gene073193.t1 MTR_5g045960 25.316 474 299 18 7 440 8 466 2.41e-23 102
MS.gene073193.t1 MTR_8g012635 33.028 218 125 5 235 435 235 448 2.50e-23 102
MS.gene073193.t1 MTR_8g012730 33.333 222 129 5 228 435 69 285 2.52e-23 100
MS.gene073193.t1 MTR_8g006710 33.333 183 109 3 257 427 257 438 2.80e-23 102
MS.gene073193.t1 MTR_6g005600 35.751 193 107 4 255 434 255 443 3.16e-23 102
MS.gene073193.t1 MTR_4g024020 25.870 460 284 18 5 421 6 451 3.45e-23 102
MS.gene073193.t1 MTR_4g117980 24.838 463 283 18 6 424 9 450 4.50e-23 102
MS.gene073193.t1 MTR_1g019520 35.632 174 99 3 257 419 4 175 7.54e-23 96.7
MS.gene073193.t1 MTR_8g009063 26.984 441 278 16 7 419 12 436 9.93e-23 100
MS.gene073193.t1 MTR_4g082820 25.855 468 296 15 7 443 6 453 1.06e-22 100
MS.gene073193.t1 MTR_7g013180 25.114 438 273 17 8 419 5 413 1.09e-22 100
MS.gene073193.t1 MTR_8g012650 32.569 218 126 5 235 435 235 448 1.13e-22 100
MS.gene073193.t1 MTR_7g102490 24.781 456 293 17 5 421 6 450 1.31e-22 100
MS.gene073193.t1 MTR_7g071040 22.336 488 338 12 3 458 12 490 1.48e-22 100
MS.gene073193.t1 MTR_2g046750 34.914 232 133 8 236 454 239 465 2.29e-22 99.8
MS.gene073193.t1 MTR_0536s0010 26.964 471 255 25 6 427 19 449 2.69e-22 99.8
MS.gene073193.t1 MTR_4g117950 24.025 487 307 17 6 457 4 462 2.80e-22 99.8
MS.gene073193.t1 MTR_7g070930 22.407 482 319 14 1 440 1 469 3.94e-22 99.4
MS.gene073193.t1 MTR_7g102560 24.686 478 292 16 5 436 6 461 4.06e-22 99.4
MS.gene073193.t1 MTR_7g102450 25.054 463 283 21 8 433 11 446 4.57e-22 99.0
MS.gene073193.t1 MTR_7g102520 26.164 451 279 16 1 413 1 435 5.87e-22 99.0
MS.gene073193.t1 MTR_8g009067 33.175 211 124 6 237 434 116 322 7.34e-22 97.1
MS.gene073193.t1 MTR_8g006260 29.433 282 171 12 168 436 181 447 8.15e-22 98.2
MS.gene073193.t1 MTR_2g059240 25.935 428 272 12 5 402 10 422 8.61e-22 98.2
MS.gene073193.t1 MTR_2g040530 31.092 238 140 7 236 454 232 464 9.74e-22 97.8
MS.gene073193.t1 MTR_8g009067 33.175 211 124 6 237 434 234 440 1.04e-21 97.8
MS.gene073193.t1 MTR_8g077590 29.348 276 169 5 166 432 184 442 1.58e-21 97.4
MS.gene073193.t1 MTR_1g107350 24.894 470 291 18 1 434 1 444 1.95e-21 97.1
MS.gene073193.t1 MTR_7g070810 25.056 443 293 14 7 421 8 439 1.96e-21 97.1
MS.gene073193.t1 MTR_6g033725 25.478 471 268 18 9 434 5 437 2.24e-21 97.1
MS.gene073193.t1 MTR_7g070800 22.727 462 306 14 7 433 5 450 2.45e-21 96.7
MS.gene073193.t1 MTR_8g044140 24.750 400 252 13 64 428 37 422 2.54e-21 96.7
MS.gene073193.t1 MTR_3g069690 32.787 183 114 5 253 434 251 425 2.57e-21 96.7
MS.gene073193.t1 MTR_5g098930 23.469 490 293 18 7 447 4 460 2.80e-21 96.7
MS.gene073193.t1 MTR_1g019510 34.171 199 116 5 234 419 230 426 3.17e-21 96.3
MS.gene073193.t1 MTR_6g033675 28.807 243 157 7 204 434 202 440 3.35e-21 96.3
MS.gene073193.t1 MTR_7g047030 33.854 192 113 5 253 434 254 441 3.48e-21 96.3
MS.gene073193.t1 MTR_7g047270 33.854 192 113 5 253 434 254 441 3.48e-21 96.3
MS.gene073193.t1 MTR_7g013200 24.516 465 295 20 8 450 5 435 4.72e-21 95.5
MS.gene073193.t1 MTR_3g049970 25.105 474 281 20 3 434 4 445 4.79e-21 95.9
MS.gene073193.t1 MTR_5g027210 25.660 265 162 4 212 444 212 473 6.21e-21 95.5
MS.gene073193.t1 MTR_6g038240 31.282 195 123 5 254 448 261 444 6.28e-21 95.5
MS.gene073193.t1 MTR_5g090610 30.088 226 135 7 234 438 221 444 1.20e-20 94.7
MS.gene073193.t1 MTR_3g079480 24.547 497 301 21 8 458 21 489 1.53e-20 94.4
MS.gene073193.t1 MTR_4g485640 24.374 439 287 16 18 428 219 640 2.87e-20 94.4
MS.gene073193.t1 MTR_8g012630 33.679 193 110 5 257 435 204 392 3.05e-20 92.8
MS.gene073193.t1 MTR_5g019580 29.885 261 158 9 214 456 224 477 3.97e-20 93.2
MS.gene073193.t1 MTR_5g016660 21.712 479 294 16 3 427 5 456 4.63e-20 92.8
MS.gene073193.t1 MTR_5g019580 32.444 225 127 9 214 419 248 466 4.87e-20 93.2
MS.gene073193.t1 MTR_5g035580 30.435 207 134 5 252 458 257 453 4.88e-20 92.8
MS.gene073193.t1 MTR_5g058320 25.862 464 281 20 5 429 7 446 5.49e-20 92.8
MS.gene073193.t1 MTR_4g117890 24.748 497 298 21 7 456 12 479 8.20e-20 92.0
MS.gene073193.t1 MTR_5g090700 30.667 225 133 7 236 439 239 461 8.90e-20 92.0
MS.gene073193.t1 MTR_5g090620 28.571 245 144 8 224 439 218 460 9.19e-20 92.0
MS.gene073193.t1 MTR_0536s0020 25.506 494 287 23 7 450 17 479 1.23e-19 91.7
MS.gene073193.t1 MTR_7g070940 23.374 492 310 15 7 458 8 472 1.62e-19 91.3
MS.gene073193.t1 MTR_5g067170 32.275 189 111 5 253 425 262 449 2.12e-19 90.9
MS.gene073193.t1 MTR_5g090660 29.956 227 136 8 234 439 233 457 2.18e-19 91.3
MS.gene073193.t1 MTR_8g074550 22.857 490 313 18 1 445 1 470 2.29e-19 90.9
MS.gene073193.t1 MTR_8g008970 31.754 211 127 5 237 434 234 440 2.29e-19 91.7
MS.gene073193.t1 MTR_8g008970 32.461 191 116 6 234 419 569 751 6.72e-16 80.9
MS.gene073193.t1 MTR_2g034990 23.490 447 295 15 6 418 9 442 2.52e-19 90.9
MS.gene073193.t1 MTR_8g012745 29.861 288 159 11 147 419 172 431 4.18e-19 90.1
MS.gene073193.t1 MTR_3g009490 33.533 167 95 4 283 436 3 166 4.72e-19 85.5
MS.gene073193.t1 MTR_3g479520 24.230 487 306 21 8 454 15 478 5.70e-19 89.7
MS.gene073193.t1 MTR_5g098960 31.624 234 127 9 235 449 231 450 6.56e-19 89.4
MS.gene073193.t1 MTR_6g035185 22.979 470 299 16 6 433 9 457 7.70e-19 89.4
MS.gene073193.t1 MTR_7g080950 30.688 189 120 5 248 436 248 425 9.28e-19 89.0
MS.gene073193.t1 MTR_5g090630 30.769 221 130 8 240 439 232 450 1.04e-18 88.6
MS.gene073193.t1 MTR_4g117960 23.108 502 315 19 1 458 6 480 1.05e-18 89.0
MS.gene073193.t1 MTR_1g107315 32.381 210 118 8 220 412 222 424 1.09e-18 89.0
MS.gene073193.t1 MTR_8g083280 28.829 222 141 7 241 456 249 459 1.32e-18 88.6
MS.gene073193.t1 MTR_3g479610 29.469 207 128 6 257 458 120 313 1.96e-18 86.3
MS.gene073193.t1 MTR_8g083290 22.013 477 285 16 6 434 2 439 2.33e-18 87.8
MS.gene073193.t1 MTR_6g033660 31.522 184 120 4 253 434 260 439 2.76e-18 87.4
MS.gene073193.t1 MTR_5g035560 30.918 207 133 6 252 456 255 453 2.76e-18 87.8
MS.gene073193.t1 MTR_4g128720 24.733 469 294 19 7 450 14 448 3.17e-18 87.0
MS.gene073193.t1 MTR_7g013260 31.928 166 107 4 257 422 251 410 3.66e-18 87.0
MS.gene073193.t1 MTR_5g090670 27.273 242 147 8 240 458 241 476 3.91e-18 87.0
MS.gene073193.t1 MTR_6g013960 23.326 433 293 12 8 406 10 437 4.01e-18 87.0
MS.gene073193.t1 MTR_6g013900 26.829 328 205 12 107 406 116 436 4.62e-18 87.0
MS.gene073193.t1 MTR_6g035265 23.368 475 282 20 6 433 9 448 4.94e-18 86.7
MS.gene073193.t1 MTR_7g080940 30.601 183 116 5 254 436 259 430 7.06e-18 86.3
MS.gene073193.t1 MTR_6g038300 30.055 183 118 5 254 436 261 433 7.29e-18 86.3
MS.gene073193.t1 MTR_7g013240 24.146 439 272 18 8 421 6 408 7.89e-18 85.9
MS.gene073193.t1 MTR_0288s0020 23.904 456 290 16 8 429 10 442 8.69e-18 85.9
MS.gene073193.t1 MTR_8g088560 28.509 228 141 8 236 449 229 448 9.74e-18 85.9
MS.gene073193.t1 MTR_8g064880 23.555 467 261 17 3 412 4 431 9.98e-18 85.9
MS.gene073193.t1 MTR_6g014190 32.240 183 113 6 253 429 91 268 1.24e-17 83.6
MS.gene073193.t1 MTR_1g107360 31.373 204 128 5 232 434 245 437 1.67e-17 85.1
MS.gene073193.t1 MTR_3g069710 32.796 186 113 7 251 434 252 427 1.79e-17 85.1
MS.gene073193.t1 MTR_7g080935 29.730 185 119 5 254 438 259 432 1.81e-17 85.1
MS.gene073193.t1 MTR_5g090580 28.000 225 140 6 240 444 242 464 2.18e-17 84.7
MS.gene073193.t1 MTR_6g014220 23.593 462 301 17 8 429 10 459 2.22e-17 84.7
MS.gene073193.t1 MTR_7g011470 25.000 456 289 13 8 434 10 441 2.40e-17 84.7
MS.gene073193.t1 MTR_7g470610 28.054 221 141 5 208 413 70 287 2.49e-17 82.8
MS.gene073193.t1 MTR_7g070583 28.054 221 141 5 208 413 70 287 2.49e-17 82.8
MS.gene073193.t1 MTR_1g107375 23.898 431 262 12 1 399 1 397 2.63e-17 84.3
MS.gene073193.t1 MTR_4g082810 33.758 157 95 3 236 384 240 395 4.01e-17 83.6
MS.gene073193.t1 MTR_4g128690 30.472 233 146 8 210 440 216 434 4.35e-17 83.6
MS.gene073193.t1 MTR_2g035040 28.866 194 119 5 257 436 173 361 4.70e-17 83.2
MS.gene073193.t1 MTR_8g090095 30.928 194 121 5 257 440 271 461 4.84e-17 83.6
MS.gene073193.t1 MTR_7g011470 24.784 464 276 15 8 434 10 437 5.00e-17 83.6
MS.gene073193.t1 MTR_5g029800 29.947 187 116 4 250 422 257 442 5.36e-17 83.6
MS.gene073193.t1 MTR_5g039900 21.589 491 326 16 7 457 12 483 7.27e-17 83.2
MS.gene073193.t1 MTR_4g008630 26.446 242 163 6 208 437 203 441 7.59e-17 83.2
MS.gene073193.t1 MTR_3g084540 26.540 211 143 4 253 456 266 471 8.95e-17 82.8
MS.gene073193.t1 MTR_6g014270 23.191 470 307 17 2 429 3 460 9.05e-17 82.8
MS.gene073193.t1 MTR_4g095008 29.586 169 112 5 253 417 260 425 1.24e-16 82.8
MS.gene073193.t1 MTR_6g014020 30.851 188 117 5 253 440 284 458 1.59e-16 82.0
MS.gene073193.t1 MTR_6g011340 23.261 460 307 15 8 429 10 461 1.72e-16 82.0
MS.gene073193.t1 MTR_7g070860 21.475 461 299 14 7 433 6 437 1.88e-16 82.0
MS.gene073193.t1 MTR_8g032950 24.283 453 299 19 6 427 10 449 1.94e-16 82.0
MS.gene073193.t1 MTR_6g014170 30.939 181 118 5 253 429 266 443 2.07e-16 81.6
MS.gene073193.t1 MTR_4g108250 23.374 492 323 15 7 458 10 487 2.58e-16 81.6
MS.gene073193.t1 MTR_4g094920 28.302 212 140 8 253 458 275 480 2.59e-16 81.6
MS.gene073193.t1 MTR_5g072860 22.296 453 297 15 8 434 18 441 3.07e-16 81.3
MS.gene073193.t1 MTR_3g479490 24.661 442 269 20 7 404 5 426 3.18e-16 81.3
MS.gene073193.t1 MTR_5g040030 24.231 260 172 7 196 433 206 462 3.35e-16 81.3
MS.gene073193.t1 MTR_7g070780 28.571 196 127 5 255 440 273 465 3.92e-16 80.9
MS.gene073193.t1 MTR_8g059425 28.689 244 138 12 210 434 227 453 4.19e-16 80.9
MS.gene073193.t1 MTR_1g029540 26.087 230 154 6 221 437 212 438 4.27e-16 80.9
MS.gene073193.t1 MTR_7g012120 30.256 195 118 6 250 428 263 455 4.31e-16 80.9
MS.gene073193.t1 MTR_0891s0010 27.315 216 139 6 221 427 52 258 4.76e-16 79.0
MS.gene073193.t1 MTR_1g032490 35.000 160 96 5 257 412 271 426 6.33e-16 80.1
MS.gene073193.t1 MTR_5g070040 29.098 244 144 11 189 419 207 434 6.56e-16 80.1
MS.gene073193.t1 MTR_7g070870 22.633 433 297 16 4 412 15 433 6.92e-16 80.1
MS.gene073193.t1 MTR_3g084530 28.272 191 124 5 253 436 266 450 7.03e-16 80.1
MS.gene073193.t1 MTR_5g016480 34.821 112 71 2 251 361 267 377 7.88e-16 80.1
MS.gene073193.t1 MTR_8g064870 33.529 170 105 5 253 416 266 433 9.07e-16 79.7
MS.gene073193.t1 MTR_6g013450 23.504 468 307 19 3 429 5 462 9.43e-16 79.7
MS.gene073193.t1 MTR_3g084520 27.225 191 126 5 253 436 266 450 1.32e-15 79.3
MS.gene073193.t1 MTR_6g013920 28.205 195 123 6 253 436 283 471 1.42e-15 79.3
MS.gene073193.t1 MTR_2g035020 30.387 181 109 5 257 421 268 447 1.98e-15 79.0
MS.gene073193.t1 MTR_6g014050 31.351 185 107 7 255 434 287 456 2.89e-15 78.2
MS.gene073193.t1 MTR_3g008010 30.939 181 109 7 257 434 286 453 4.24e-15 77.8
MS.gene073193.t1 MTR_4g118000 22.345 452 286 16 6 422 10 431 5.05e-15 77.4
MS.gene073193.t1 MTR_3g031400 24.779 226 144 5 220 434 215 425 7.00e-15 77.0
MS.gene073193.t1 MTR_6g014200 29.282 181 121 5 253 429 281 458 8.60e-15 76.6
MS.gene073193.t1 MTR_6g013990 27.473 182 122 5 253 434 282 453 9.08e-15 76.6
MS.gene073193.t1 MTR_5g004940 33.333 132 86 2 242 372 182 312 9.84e-15 76.3
MS.gene073193.t1 MTR_6g014150 32.075 159 98 5 253 406 281 434 1.27e-14 76.3
MS.gene073193.t1 MTR_5g072820 23.371 445 293 17 8 434 10 424 1.49e-14 75.9
MS.gene073193.t1 MTR_6g014250 32.653 147 92 4 257 401 286 427 1.50e-14 75.9
MS.gene073193.t1 MTR_6g014240 31.210 157 102 4 253 406 251 404 1.60e-14 75.9
MS.gene073193.t1 MTR_8g007585 32.653 147 92 4 257 401 200 341 1.68e-14 75.5
MS.gene073193.t1 MTR_3g031450 24.215 223 139 5 220 427 213 420 2.06e-14 75.5
MS.gene073193.t1 MTR_1g107285 28.986 207 123 6 220 412 223 419 2.31e-14 75.5
MS.gene073193.t1 MTR_1g107380 26.570 207 144 6 251 456 271 470 3.58e-14 74.7
MS.gene073193.t1 MTR_8g056740 27.723 202 126 6 210 399 111 304 4.68e-14 73.9
MS.gene073193.t1 MTR_6g014040 31.677 161 96 5 253 406 285 438 9.64e-14 73.6
MS.gene073193.t1 MTR_5g072810 21.604 449 299 19 8 434 12 429 3.11e-13 71.6
MS.gene073193.t1 MTR_6g014290 30.612 147 95 4 257 401 286 427 9.91e-13 70.5
MS.gene073193.t1 MTR_6g014310 28.333 180 115 6 257 434 289 456 2.26e-12 69.3
MS.gene073193.t1 MTR_8g009840 30.000 210 125 5 224 419 289 490 2.55e-12 69.3
MS.gene073193.t1 MTR_5g072830 22.697 445 296 18 8 434 10 424 5.39e-12 67.8
MS.gene073193.t1 MTR_6g014300 30.709 127 85 3 279 405 296 419 6.26e-12 67.8
MS.gene073193.t1 MTR_4g064987 32.609 184 103 9 256 432 258 427 7.30e-12 67.4
MS.gene073193.t1 MTR_4g064987 32.609 184 103 9 256 432 252 421 7.58e-12 67.4
MS.gene073193.t1 MTR_7g080900 27.174 184 124 5 257 440 264 437 8.21e-12 67.4
MS.gene073193.t1 MTR_7g039550 24.000 250 159 8 220 447 5 245 1.41e-11 65.5
MS.gene073193.t1 MTR_0477s0010 30.968 155 100 4 253 405 121 270 1.93e-11 65.5
MS.gene073193.t1 MTR_6g078320 26.289 194 133 3 236 419 252 445 2.92e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene073193.t1 AT5G54010 44.812 453 239 6 7 458 5 447 9.43e-139 406
MS.gene073193.t1 AT5G53990 44.150 453 236 5 7 458 5 441 2.07e-136 400
MS.gene073193.t1 AT4G27570 43.202 456 241 7 7 458 6 447 3.09e-136 400
MS.gene073193.t1 AT4G27560 43.202 456 241 7 7 458 6 447 3.81e-135 397
MS.gene073193.t1 AT1G64920 43.545 457 237 6 7 458 5 445 4.58e-135 397
MS.gene073193.t1 AT5G54060 45.119 461 238 8 7 458 12 466 2.10e-133 393
MS.gene073193.t1 AT4G09500 42.702 459 238 8 5 458 3 441 3.13e-132 389
MS.gene073193.t1 AT1G64910 43.488 453 239 6 7 458 5 441 7.32e-132 388
MS.gene073193.t1 AT2G22930 43.573 459 234 6 5 458 3 441 1.76e-131 387
MS.gene073193.t1 AT3G29630 42.605 453 238 6 7 454 5 440 1.45e-128 380
MS.gene073193.t1 AT3G29630 41.778 450 220 7 7 454 5 414 9.09e-121 359
MS.gene073193.t1 AT1G50580 41.501 453 241 7 7 454 5 438 5.46e-119 355
MS.gene073193.t1 AT4G09500 40.393 458 225 8 5 458 3 416 1.98e-118 353
MS.gene073193.t1 AT2G22590 33.190 464 283 17 7 454 14 466 3.15e-63 212
MS.gene073193.t1 AT5G49690 31.209 455 290 11 7 452 9 449 3.37e-63 212
MS.gene073193.t1 AT5G65550 30.000 470 293 16 5 454 6 459 4.81e-61 206
MS.gene073193.t1 AT2G22930 39.269 219 119 3 5 223 3 207 1.18e-46 163
MS.gene073193.t1 AT5G03490 26.562 448 290 12 2 434 14 437 3.14e-35 136
MS.gene073193.t1 AT5G12890 27.403 489 276 19 4 443 6 464 4.42e-34 134
MS.gene073193.t1 AT1G51210 26.879 439 282 14 8 433 20 432 3.11e-32 127
MS.gene073193.t1 AT1G73880 26.573 429 271 16 2 402 8 420 1.47e-31 126
MS.gene073193.t1 AT4G36770 27.293 458 284 18 7 435 3 440 9.43e-31 124
MS.gene073193.t1 AT4G34131 26.271 472 295 17 1 433 1 458 1.50e-30 124
MS.gene073193.t1 AT4G34135 27.312 465 258 19 7 427 10 438 1.31e-29 121
MS.gene073193.t1 AT2G15480 26.247 461 299 14 7 434 9 461 1.19e-28 118
MS.gene073193.t1 AT2G36770 28.571 462 280 18 5 427 11 461 1.58e-28 118
MS.gene073193.t1 AT2G18570 24.672 458 305 13 1 434 1 442 1.63e-28 117
MS.gene073193.t1 AT2G15490 25.490 459 297 15 7 430 6 454 3.81e-28 117
MS.gene073193.t1 AT2G15490 25.439 456 298 14 7 430 6 451 3.86e-28 117
MS.gene073193.t1 AT2G36750 29.039 458 261 23 5 418 7 444 3.91e-28 117
MS.gene073193.t1 AT2G15480 25.792 442 292 12 7 419 9 443 6.04e-28 116
MS.gene073193.t1 AT4G34138 24.847 491 308 14 7 458 10 478 6.08e-28 116
MS.gene073193.t1 AT2G16890 26.457 446 287 18 8 429 9 437 1.34e-27 115
MS.gene073193.t1 AT1G10400 25.732 478 304 19 7 452 6 464 1.38e-27 115
MS.gene073193.t1 AT2G36800 27.195 467 279 19 6 427 10 460 4.62e-27 114
MS.gene073193.t1 AT2G36780 27.371 464 283 20 5 427 11 461 1.41e-26 112
MS.gene073193.t1 AT2G16890 26.392 413 267 16 8 398 9 406 7.43e-26 109
MS.gene073193.t1 AT1G05675 26.116 448 285 14 8 434 6 428 1.04e-25 109
MS.gene073193.t1 AT3G53150 27.193 456 278 18 7 421 21 463 2.26e-25 108
MS.gene073193.t1 AT2G31750 24.724 453 289 15 8 436 8 432 3.16e-25 108
MS.gene073193.t1 AT2G31750 24.565 460 295 15 1 436 1 432 4.01e-25 108
MS.gene073193.t1 AT5G14860 25.551 454 274 16 8 420 8 438 1.02e-24 107
MS.gene073193.t1 AT4G01070 34.862 218 124 6 236 439 235 448 2.66e-24 105
MS.gene073193.t1 AT1G01420 25.793 473 277 17 8 439 8 447 2.67e-24 105
MS.gene073193.t1 AT2G36760 27.195 467 280 17 5 427 11 461 2.69e-24 105
MS.gene073193.t1 AT3G53160 25.597 461 300 19 1 427 1 452 3.21e-24 105
MS.gene073193.t1 AT1G01420 25.949 474 275 17 8 439 11 450 3.35e-24 105
MS.gene073193.t1 AT2G31790 24.793 484 296 18 8 458 8 456 8.64e-24 103
MS.gene073193.t1 AT2G18560 30.798 263 147 8 201 434 96 352 1.16e-23 102
MS.gene073193.t1 AT1G05680 26.667 465 261 20 8 434 6 428 3.29e-23 102
MS.gene073193.t1 AT2G43820 24.211 475 283 18 8 449 7 437 2.79e-22 99.4
MS.gene073193.t1 AT5G66690 25.373 469 276 17 8 435 7 442 3.06e-22 99.8
MS.gene073193.t1 AT2G36970 30.263 228 147 6 215 437 229 449 1.34e-21 97.8
MS.gene073193.t1 AT2G29730 25.885 452 279 16 7 425 4 432 1.82e-21 97.1
MS.gene073193.t1 AT2G30140 24.580 476 310 18 2 456 5 452 1.93e-21 97.1
MS.gene073193.t1 AT3G21750 29.461 241 148 5 236 456 232 470 4.09e-21 96.3
MS.gene073193.t1 AT2G30150 24.330 485 303 20 4 458 6 456 4.33e-21 95.9
MS.gene073193.t1 AT5G26310 31.944 216 125 5 236 435 233 442 6.06e-21 95.5
MS.gene073193.t1 AT4G15280 31.481 216 130 5 257 456 294 507 6.68e-21 95.9
MS.gene073193.t1 AT4G15280 31.481 216 130 5 257 456 262 475 7.51e-21 95.5
MS.gene073193.t1 AT3G50740 29.825 228 140 4 229 440 231 454 7.79e-21 95.5
MS.gene073193.t1 AT4G15260 29.536 237 145 6 240 456 122 356 1.35e-20 93.2
MS.gene073193.t1 AT1G07250 29.004 231 152 5 236 456 246 474 2.42e-20 94.0
MS.gene073193.t1 AT2G30140 24.116 481 307 19 2 456 5 453 2.77e-20 93.6
MS.gene073193.t1 AT3G21760 30.374 214 131 5 257 454 269 480 4.72e-20 92.8
MS.gene073193.t1 AT3G21560 24.194 496 308 19 1 454 3 472 9.65e-20 92.0
MS.gene073193.t1 AT2G30150 24.101 473 298 19 13 458 2 440 1.48e-19 91.3
MS.gene073193.t1 AT2G43840 31.053 190 121 4 259 448 257 436 2.34e-19 90.5
MS.gene073193.t1 AT2G43840 31.053 190 121 4 259 448 257 436 2.36e-19 90.5
MS.gene073193.t1 AT2G36790 26.059 472 285 21 2 427 7 460 2.78e-19 90.9
MS.gene073193.t1 AT3G21780 30.093 216 133 5 257 456 257 470 2.90e-19 90.5
MS.gene073193.t1 AT4G15480 28.936 235 143 9 218 434 226 454 4.00e-19 90.1
MS.gene073193.t1 AT3G21790 27.237 257 163 5 220 454 224 478 7.70e-19 89.4
MS.gene073193.t1 AT4G15550 21.921 479 336 13 2 456 7 471 8.54e-19 89.0
MS.gene073193.t1 AT1G24100 28.713 202 135 4 257 458 266 458 1.04e-18 88.6
MS.gene073193.t1 AT2G29740 32.812 192 119 5 236 419 250 439 1.06e-18 89.0
MS.gene073193.t1 AT3G21800 29.302 215 133 4 257 454 263 475 1.10e-18 89.0
MS.gene073193.t1 AT5G59580 25.000 480 286 19 8 454 9 447 1.50e-18 88.2
MS.gene073193.t1 AT1G01390 25.054 463 294 19 8 439 25 465 2.04e-18 88.2
MS.gene073193.t1 AT1G01390 25.054 463 294 19 8 439 8 448 2.73e-18 87.4
MS.gene073193.t1 AT1G07260 28.384 229 152 6 236 454 245 471 3.24e-18 87.4
MS.gene073193.t1 AT2G29710 32.338 201 117 7 237 425 239 432 3.71e-18 87.0
MS.gene073193.t1 AT1G07240 30.802 237 152 7 227 454 242 475 4.21e-18 87.0
MS.gene073193.t1 AT5G05870 28.512 242 157 7 206 440 204 436 1.17e-17 85.5
MS.gene073193.t1 AT3G11340 28.151 238 150 8 201 427 186 413 1.61e-17 85.1
MS.gene073193.t1 AT3G16520 34.247 146 91 2 257 398 261 405 2.07e-17 84.7
MS.gene073193.t1 AT3G16520 34.247 146 91 2 257 398 261 405 2.18e-17 84.7
MS.gene073193.t1 AT3G16520 34.247 146 91 2 257 398 261 405 2.26e-17 84.7
MS.gene073193.t1 AT5G05890 29.185 233 150 8 207 432 204 428 8.85e-17 82.8
MS.gene073193.t1 AT3G46700 23.282 451 300 15 8 445 9 426 1.43e-16 82.0
MS.gene073193.t1 AT3G22250 31.313 198 114 8 257 450 274 453 1.88e-16 82.0
MS.gene073193.t1 AT4G15500 32.877 146 91 4 257 401 267 406 2.10e-16 81.6
MS.gene073193.t1 AT1G22360 23.983 467 295 20 8 436 10 454 2.68e-16 81.6
MS.gene073193.t1 AT4G15490 21.598 463 313 16 1 434 1 442 4.25e-16 80.9
MS.gene073193.t1 AT2G29750 31.351 185 117 5 241 417 255 437 4.31e-16 80.9
MS.gene073193.t1 AT3G46680 24.675 462 285 18 8 445 9 431 4.46e-16 80.5
MS.gene073193.t1 AT1G06000 25.990 404 243 19 8 394 10 374 1.35e-15 79.0
MS.gene073193.t1 AT3G55700 28.175 252 155 9 206 445 203 440 1.37e-15 79.3
MS.gene073193.t1 AT3G55710 33.571 140 88 4 259 396 263 399 2.24e-15 78.6
MS.gene073193.t1 AT1G22400 23.326 463 286 18 8 427 13 449 4.50e-15 77.8
MS.gene073193.t1 AT5G38040 25.000 460 296 19 16 454 18 449 5.60e-15 77.4
MS.gene073193.t1 AT1G22360 23.765 425 271 17 8 394 10 419 1.05e-14 76.6
MS.gene073193.t1 AT1G78270 29.570 186 118 6 253 436 283 457 1.49e-14 76.3
MS.gene073193.t1 AT4G14090 26.068 234 157 8 223 448 220 445 1.71e-14 75.9
MS.gene073193.t1 AT1G05530 24.082 245 162 6 222 448 206 444 3.93e-14 74.7
MS.gene073193.t1 AT2G23250 21.868 439 284 16 18 432 8 411 1.30e-13 73.2
MS.gene073193.t1 AT1G05560 25.207 242 160 7 222 448 256 491 4.24e-13 71.6
MS.gene073193.t1 AT1G05560 25.207 242 160 7 222 448 206 441 4.35e-13 71.6
MS.gene073193.t1 AT2G26480 26.207 290 173 12 167 445 168 427 7.08e-13 70.9
MS.gene073193.t1 AT5G17050 27.374 179 115 6 257 434 268 432 1.26e-12 70.1
MS.gene073193.t1 AT2G23260 26.291 213 136 6 235 432 223 429 1.42e-12 69.7
MS.gene073193.t1 AT1G30530 27.041 196 127 7 257 450 262 443 2.38e-12 68.9
MS.gene073193.t1 AT1G22380 29.891 184 119 6 253 436 284 457 2.77e-12 68.9
MS.gene073193.t1 AT3G02100 29.032 186 109 6 257 440 277 441 3.04e-12 68.9
MS.gene073193.t1 AT5G05900 25.000 244 161 8 207 436 205 440 3.62e-12 68.6
MS.gene073193.t1 AT5G38010 28.112 249 154 10 204 445 205 435 5.03e-12 68.2
MS.gene073193.t1 AT1G22340 27.174 184 125 4 253 436 284 458 5.46e-12 68.2
MS.gene073193.t1 AT3G46720 23.112 437 287 14 8 428 9 412 5.70e-12 67.8
MS.gene073193.t1 AT3G46650 24.664 446 282 20 8 440 10 414 7.78e-12 67.4
MS.gene073193.t1 AT5G17030 24.510 204 138 7 257 458 267 456 1.29e-11 67.0
MS.gene073193.t1 AT5G17040 25.510 196 130 7 257 450 251 432 6.18e-11 64.7

Find 88 sgRNAs with CRISPR-Local

Find 106 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTAAACCTGTTCTGCTTAC+AGG 0.198988 2.3:+14301343 MS.gene073193:CDS
TCCCACAGAAAAGTAGAATT+TGG 0.226454 2.3:+14301202 MS.gene073193:CDS
AAAGGAAGAGGGATTGTTTA+TGG 0.235582 2.3:+14301613 MS.gene073193:CDS
AGGATATTGAACTTCTTCTA+TGG 0.260807 2.3:+14300939 MS.gene073193:CDS
TGAAATTGATCTTGTTCTAA+TGG 0.268470 2.3:-14301475 None:intergenic
CCAAGGTAAGCTGATGATAT+TGG 0.272835 2.3:-14301061 None:intergenic
AAAGTCTTCAATACTTGATA+TGG 0.289217 2.3:+14301035 MS.gene073193:CDS
GAGGGATTGTTTATGGAAGT+TGG 0.292729 2.3:+14301620 MS.gene073193:CDS
ATCACAGTTCCTCATGTTAA+TGG 0.297077 2.3:+14300833 MS.gene073193:CDS
ACCCTTTCATTGAACCCTTC+TGG 0.299693 2.3:-14301589 None:intergenic
GATCTCATGAAACCACCTTC+AGG 0.343673 2.3:+14301127 MS.gene073193:CDS
GGGTTCAATGAAAGGGTTAA+AGG 0.345863 2.3:+14301595 MS.gene073193:CDS
TTTGTTGGCTCAGGTAAAAT+AGG 0.353710 2.3:-14301367 None:intergenic
ACCTCTTAATGCTAATTTGT+TGG 0.362141 2.3:-14300723 None:intergenic
AAAGGATGCATAGAAATTGA+TGG 0.363314 2.3:+14301289 MS.gene073193:CDS
GTTCAATATCCTTCTCTGTT+TGG 0.364016 2.3:-14300928 None:intergenic
TAAAACTTGATGGATGAATC+AGG 0.371051 2.3:-14301154 None:intergenic
GCCAACAAAAGCTACTTTAG+AGG 0.372746 2.3:+14301381 MS.gene073193:CDS
CAATTTCAAGAGTTGTTACT+TGG 0.373395 2.3:+14301490 MS.gene073193:CDS
TTACATGATCGCTCTGACAT+AGG 0.376882 2.3:+14301238 MS.gene073193:CDS
GCAGCACTTAAGCCACCTAT+TGG 0.380205 2.3:+14301541 MS.gene073193:CDS
AAAATGGTTAACATGGCTTA+AGG 0.387423 2.3:+14301405 MS.gene073193:CDS
GGCTTAAGTGCTGCAAGAAA+TGG 0.387827 2.3:-14301532 None:intergenic
TTACTTGGTCTAGAGTTAAC+AGG 0.387868 2.3:+14301505 MS.gene073193:CDS
TTCATGCGAATAAAACTTGA+TGG 0.390577 2.3:-14301164 None:intergenic
ATCCTTCTCTGTTTGGTCCA+TGG 0.404687 2.3:-14300921 None:intergenic
TTGTTGGAGAGACGGAGAAA+TGG 0.411680 2.3:-14300707 None:intergenic
ATAGGACCTGTAAGCAGAAC+AGG 0.424186 2.3:-14301349 None:intergenic
AAATCAAAGAAAACTATTTG+TGG 0.424765 2.3:-14300971 None:intergenic
AAATGGTTAACATGGCTTAA+GGG 0.429208 2.3:+14301406 MS.gene073193:CDS
TTAACATGAGGAACTGTGAT+AGG 0.442956 2.3:-14300830 None:intergenic
AATGATGAGTAATAAGTTGA+AGG 0.445608 2.3:+14301789 MS.gene073193:CDS
TCAATAGACTCAAATCCAAT+AGG 0.448264 2.3:-14301556 None:intergenic
ATCTCATGAAACCACCTTCA+GGG 0.449830 2.3:+14301128 MS.gene073193:CDS
AGGTAATAAGATTTGGATGA+AGG 0.452133 2.3:-14300802 None:intergenic
AATGTTTCCATGGTTTGCTA+TGG 0.456397 2.3:+14300673 MS.gene073193:CDS
ACCAGAAGGGTTCAATGAAA+GGG 0.459081 2.3:+14301588 MS.gene073193:CDS
TCCAACAAATTAGCATTAAG+AGG 0.464701 2.3:+14300722 MS.gene073193:CDS
TACCAGAAGGGTTCAATGAA+AGG 0.478236 2.3:+14301587 MS.gene073193:CDS
GTTCTTGCCACGTGTAGATC+CGG 0.478304 2.3:+14301747 MS.gene073193:CDS
ATGGATGATGAGATTGAGGT+TGG 0.480692 2.3:+14301889 MS.gene073193:CDS
TTGAAGAAGCTTTACCAGAA+GGG 0.488852 2.3:+14301575 MS.gene073193:CDS
CTTGCATTCATGATATGATC+CGG 0.491833 2.3:-14301766 None:intergenic
AATCTTCCTTGACTATGTCT+TGG 0.492827 2.3:-14301091 None:intergenic
ATGTTTCCATGGTTTGCTAT+GGG 0.504571 2.3:+14300674 MS.gene073193:CDS
TGCACATAGCAATGTTTCCA+TGG 0.504753 2.3:+14300663 MS.gene073193:CDS
ATGAAAGGGTTAAAGGAAGA+GGG 0.508737 2.3:+14301602 MS.gene073193:CDS
ATGAGTAATAAGTTGAAGGT+TGG 0.508828 2.3:+14301793 MS.gene073193:CDS
ATGCTAATTTGTTGGAGAGA+CGG 0.513606 2.3:-14300715 None:intergenic
TCAGATGCAGTTGCTTTCAA+AGG 0.514738 2.3:+14301271 MS.gene073193:CDS
AATGAAAGGGTTAAAGGAAG+AGG 0.519314 2.3:+14301601 MS.gene073193:CDS
GGATATTGAACTTCTTCTAT+GGG 0.523842 2.3:+14300940 MS.gene073193:CDS
CCCTCTCATTGCTACAGCCA+TGG 0.524219 2.3:+14300904 MS.gene073193:CDS
CCAATATCATCAGCTTACCT+TGG 0.525225 2.3:+14301061 MS.gene073193:CDS
TATGTCTTGGTATATTTCCA+AGG 0.530714 2.3:-14301078 None:intergenic
GTTGGTATAGAAGTTGAGAA+AGG 0.534215 2.3:+14301811 MS.gene073193:CDS
TATGATGGATGATGAGATTG+AGG 0.543654 2.3:+14301885 MS.gene073193:CDS
AGAAAAGTAGAATTTGGAAG+TGG 0.556881 2.3:+14301208 MS.gene073193:CDS
ATTGAAGAAGCTTTACCAGA+AGG 0.560350 2.3:+14301574 MS.gene073193:CDS
GGGATTCAAACATGGTTCTG+TGG 0.569145 2.3:+14301426 MS.gene073193:CDS
ATTGCTATGTGCAAAGGAGG+AGG 0.570238 2.3:-14300653 None:intergenic
CAAAGCTGTGAAGATTATGA+TGG 0.577236 2.3:+14301870 MS.gene073193:CDS
AATGAGAGGGAATAAAGAAG+AGG 0.588167 2.3:-14300891 None:intergenic
TGGCTTAAGGGATTCAAACA+TGG 0.589723 2.3:+14301418 MS.gene073193:CDS
AACATTGCTATGTGCAAAGG+AGG 0.593375 2.3:-14300656 None:intergenic
CAAAGGAGGAGGAGAATCCA+TGG 0.596316 2.3:-14300642 None:intergenic
ATGATGAGATTGAGGTTGGA+AGG 0.601241 2.3:+14301893 MS.gene073193:CDS
GGAAACATTGCTATGTGCAA+AGG 0.601320 2.3:-14300659 None:intergenic
AAAACTTGATGGATGAATCA+GGG 0.602785 2.3:-14301153 None:intergenic
ACTTGTTAACACGTGTCAGT+TGG 0.603876 2.3:+14301723 MS.gene073193:CDS
TGATGAGATTGAGGTTGGAA+GGG 0.605470 2.3:+14301894 MS.gene073193:CDS
ATGAGAGGGAATAAAGAAGA+GGG 0.605864 2.3:-14300890 None:intergenic
GATGAATCAGGGAACCCTGA+AGG 0.613809 2.3:-14301142 None:intergenic
ACACGTGTTAACAAGTCCCT+CGG 0.621993 2.3:-14301716 None:intergenic
ATAGACTCAAATCCAATAGG+TGG 0.626788 2.3:-14301553 None:intergenic
GTTATGAAACATCCAACAGA+AGG 0.628836 2.3:-14301670 None:intergenic
TCCATGGCTGTAGCAATGAG+AGG 0.638914 2.3:-14300905 None:intergenic
AATATACCAAGACATAGTCA+AGG 0.642666 2.3:+14301085 MS.gene073193:CDS
CCATGGCTGTAGCAATGAGA+GGG 0.646127 2.3:-14300904 None:intergenic
AGCCATGGACCAAACAGAGA+AGG 0.647882 2.3:+14300919 MS.gene073193:CDS
GAATCAGGGAACCCTGAAGG+TGG 0.649118 2.3:-14301139 None:intergenic
AAGTGTCCCATAGCAAACCA+TGG 0.661811 2.3:-14300680 None:intergenic
GAAGTAGTTTCAGCATCATG+AGG 0.663497 2.3:-14300860 None:intergenic
TGGAGCTGCTAGTATAACCG+AGG 0.676722 2.3:+14301699 MS.gene073193:CDS
TGAGGAAGACCATTAACATG+AGG 0.685206 2.3:-14300842 None:intergenic
ATATGATCCGGATCTACACG+TGG 0.704082 2.3:-14301754 None:intergenic
GGAGCTGCTAGTATAACCGA+GGG 0.722597 2.3:+14301700 MS.gene073193:CDS
GGATGTTTCATAACACACTG+TGG 0.766209 2.3:+14301679 MS.gene073193:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTCTTTGATTTTCAATAT+TGG + chr2.3:14300981-14301000 MS.gene073193:CDS 15.0%
!! AAATCAAAGAAAACTATTTG+TGG - chr2.3:14300974-14300993 None:intergenic 20.0%
! AAAGTCTTCAATACTTGATA+TGG + chr2.3:14301035-14301054 MS.gene073193:CDS 25.0%
! GGAAAAAAGGTAATAAGATT+TGG - chr2.3:14300812-14300831 None:intergenic 25.0%
! TGAAATTGATCTTGTTCTAA+TGG - chr2.3:14301478-14301497 None:intergenic 25.0%
!! AATGATGAGTAATAAGTTGA+AGG + chr2.3:14301789-14301808 MS.gene073193:CDS 25.0%
!!! AATTTGTTGAGTGTGTTTTT+AGG - chr2.3:14300770-14300789 None:intergenic 25.0%
!!! ATTTGTTGAGTGTGTTTTTA+GGG - chr2.3:14300769-14300788 None:intergenic 25.0%
AAAATGGTTAACATGGCTTA+AGG + chr2.3:14301405-14301424 MS.gene073193:CDS 30.0%
AAAGGATGCATAGAAATTGA+TGG + chr2.3:14301289-14301308 MS.gene073193:CDS 30.0%
AAATGGTTAACATGGCTTAA+GGG + chr2.3:14301406-14301425 MS.gene073193:CDS 30.0%
AATATACCAAGACATAGTCA+AGG + chr2.3:14301085-14301104 MS.gene073193:CDS 30.0%
AGAAAAGTAGAATTTGGAAG+TGG + chr2.3:14301208-14301227 MS.gene073193:CDS 30.0%
AGGATATTGAACTTCTTCTA+TGG + chr2.3:14300939-14300958 MS.gene073193:CDS 30.0%
AGGTAATAAGATTTGGATGA+AGG - chr2.3:14300805-14300824 None:intergenic 30.0%
CAATTTCAAGAGTTGTTACT+TGG + chr2.3:14301490-14301509 MS.gene073193:CDS 30.0%
GGATATTGAACTTCTTCTAT+GGG + chr2.3:14300940-14300959 MS.gene073193:CDS 30.0%
TAGAGGAAAAATGGTTAACA+TGG + chr2.3:14301398-14301417 MS.gene073193:CDS 30.0%
TATGTCTTGGTATATTTCCA+AGG - chr2.3:14301081-14301100 None:intergenic 30.0%
TCAATAGACTCAAATCCAAT+AGG - chr2.3:14301559-14301578 None:intergenic 30.0%
TCCAACAAATTAGCATTAAG+AGG + chr2.3:14300722-14300741 MS.gene073193:CDS 30.0%
TTCATGCGAATAAAACTTGA+TGG - chr2.3:14301167-14301186 None:intergenic 30.0%
! AAAACTTGATGGATGAATCA+GGG - chr2.3:14301156-14301175 None:intergenic 30.0%
! AAGCTACTTTAGAGGAAAAA+TGG + chr2.3:14301389-14301408 MS.gene073193:CDS 30.0%
! ACCTCTTAATGCTAATTTGT+TGG - chr2.3:14300726-14300745 None:intergenic 30.0%
! ATGAGTAATAAGTTGAAGGT+TGG + chr2.3:14301793-14301812 MS.gene073193:CDS 30.0%
! GACTATCTTCAAACTGTTTT+TGG + chr2.3:14301322-14301341 MS.gene073193:CDS 30.0%
! TAAAACTTGATGGATGAATC+AGG - chr2.3:14301157-14301176 None:intergenic 30.0%
!! TCCAAATTCTACTTTTCTGT+GGG - chr2.3:14301206-14301225 None:intergenic 30.0%
!! TTCCAAATTCTACTTTTCTG+TGG - chr2.3:14301207-14301226 None:intergenic 30.0%
!!! ATTTTAGAACATCCTTCTGT+TGG + chr2.3:14301658-14301677 MS.gene073193:CDS 30.0%
AAAGGAAGAGGGATTGTTTA+TGG + chr2.3:14301613-14301632 MS.gene073193:CDS 35.0%
AATCTTCCTTGACTATGTCT+TGG - chr2.3:14301094-14301113 None:intergenic 35.0%
AATGAAAGGGTTAAAGGAAG+AGG + chr2.3:14301601-14301620 MS.gene073193:CDS 35.0%
AATGAGAGGGAATAAAGAAG+AGG - chr2.3:14300894-14300913 None:intergenic 35.0%
AGGAACTGTGATAGGAAAAA+AGG - chr2.3:14300825-14300844 None:intergenic 35.0%
ATAGACTCAAATCCAATAGG+TGG - chr2.3:14301556-14301575 None:intergenic 35.0%
ATCACAGTTCCTCATGTTAA+TGG + chr2.3:14300833-14300852 MS.gene073193:CDS 35.0%
ATGAAAGGGTTAAAGGAAGA+GGG + chr2.3:14301602-14301621 MS.gene073193:CDS 35.0%
ATGAGAGGGAATAAAGAAGA+GGG - chr2.3:14300893-14300912 None:intergenic 35.0%
ATTGAAGAAGCTTTACCAGA+AGG + chr2.3:14301574-14301593 MS.gene073193:CDS 35.0%
CAAAGCTGTGAAGATTATGA+TGG + chr2.3:14301870-14301889 MS.gene073193:CDS 35.0%
CCAAACTTGACTCAAAAACT+TGG + chr2.3:14301007-14301026 MS.gene073193:CDS 35.0%
CTTGCATTCATGATATGATC+CGG - chr2.3:14301769-14301788 None:intergenic 35.0%
GTTATGAAACATCCAACAGA+AGG - chr2.3:14301673-14301692 None:intergenic 35.0%
GTTCAATATCCTTCTCTGTT+TGG - chr2.3:14300931-14300950 None:intergenic 35.0%
GTTGGTATAGAAGTTGAGAA+AGG + chr2.3:14301811-14301830 MS.gene073193:CDS 35.0%
TCCCACAGAAAAGTAGAATT+TGG + chr2.3:14301202-14301221 MS.gene073193:CDS 35.0%
TTAACATGAGGAACTGTGAT+AGG - chr2.3:14300833-14300852 None:intergenic 35.0%
TTGAAGAAGCTTTACCAGAA+GGG + chr2.3:14301575-14301594 MS.gene073193:CDS 35.0%
! TACTTTTCTGTGGGAAACTA+GGG - chr2.3:14301197-14301216 None:intergenic 35.0%
! TTACTTGGTCTAGAGTTAAC+AGG + chr2.3:14301505-14301524 MS.gene073193:CDS 35.0%
! TTTTGTGCATATGGAAGTGA+AGG + chr2.3:14301451-14301470 MS.gene073193:CDS 35.0%
!! AATGTTTCCATGGTTTGCTA+TGG + chr2.3:14300673-14300692 MS.gene073193:CDS 35.0%
!! ATGCTAATTTGTTGGAGAGA+CGG - chr2.3:14300718-14300737 None:intergenic 35.0%
!! ATGTTTCCATGGTTTGCTAT+GGG + chr2.3:14300674-14300693 MS.gene073193:CDS 35.0%
!! TATGATGGATGATGAGATTG+AGG + chr2.3:14301885-14301904 MS.gene073193:CDS 35.0%
!! TTTGTTGGCTCAGGTAAAAT+AGG - chr2.3:14301370-14301389 None:intergenic 35.0%
!!! CCAAGTTTTTGAGTCAAGTT+TGG - chr2.3:14301010-14301029 None:intergenic 35.0%
!!! TCCTCTAAAGTAGCTTTTGT+TGG - chr2.3:14301385-14301404 None:intergenic 35.0%
!!! TCTGTGGTTTTTTGTGCATA+TGG + chr2.3:14301442-14301461 MS.gene073193:CDS 35.0%
AACATTGCTATGTGCAAAGG+AGG - chr2.3:14300659-14300678 None:intergenic 40.0%
ACCAGAAGGGTTCAATGAAA+GGG + chr2.3:14301588-14301607 MS.gene073193:CDS 40.0%
ATCTCATGAAACCACCTTCA+GGG + chr2.3:14301128-14301147 MS.gene073193:CDS 40.0%
ATGATGAGATTGAGGTTGGA+AGG + chr2.3:14301893-14301912 MS.gene073193:CDS 40.0%
ATGGATGATGAGATTGAGGT+TGG + chr2.3:14301889-14301908 MS.gene073193:CDS 40.0%
CCAAGGTAAGCTGATGATAT+TGG - chr2.3:14301064-14301083 None:intergenic 40.0%
CCAATATCATCAGCTTACCT+TGG + chr2.3:14301061-14301080 MS.gene073193:CDS 40.0%
GAAGTAGTTTCAGCATCATG+AGG - chr2.3:14300863-14300882 None:intergenic 40.0%
GAGGGATTGTTTATGGAAGT+TGG + chr2.3:14301620-14301639 MS.gene073193:CDS 40.0%
GGAAACATTGCTATGTGCAA+AGG - chr2.3:14300662-14300681 None:intergenic 40.0%
GGATGTTTCATAACACACTG+TGG + chr2.3:14301679-14301698 MS.gene073193:CDS 40.0%
GGGTTCAATGAAAGGGTTAA+AGG + chr2.3:14301595-14301614 MS.gene073193:CDS 40.0%
TACCAGAAGGGTTCAATGAA+AGG + chr2.3:14301587-14301606 MS.gene073193:CDS 40.0%
TGAGGAAGACCATTAACATG+AGG - chr2.3:14300845-14300864 None:intergenic 40.0%
TGATGAGATTGAGGTTGGAA+GGG + chr2.3:14301894-14301913 MS.gene073193:CDS 40.0%
TGCACATAGCAATGTTTCCA+TGG + chr2.3:14300663-14300682 MS.gene073193:CDS 40.0%
TGGCTTAAGGGATTCAAACA+TGG + chr2.3:14301418-14301437 MS.gene073193:CDS 40.0%
TTACATGATCGCTCTGACAT+AGG + chr2.3:14301238-14301257 MS.gene073193:CDS 40.0%
! ACTTGTTAACACGTGTCAGT+TGG + chr2.3:14301723-14301742 MS.gene073193:CDS 40.0%
! GCCAACAAAAGCTACTTTAG+AGG + chr2.3:14301381-14301400 MS.gene073193:CDS 40.0%
! TCAGATGCAGTTGCTTTCAA+AGG + chr2.3:14301271-14301290 MS.gene073193:CDS 40.0%
!! CTACTTTTCTGTGGGAAACT+AGG - chr2.3:14301198-14301217 None:intergenic 40.0%
!!! AAAGTAGCTTTTGTTGGCTC+AGG - chr2.3:14301379-14301398 None:intergenic 40.0%
AAGTGTCCCATAGCAAACCA+TGG - chr2.3:14300683-14300702 None:intergenic 45.0%
ACACGTGTTAACAAGTCCCT+CGG - chr2.3:14301719-14301738 None:intergenic 45.0%
ACCCTTTCATTGAACCCTTC+TGG - chr2.3:14301592-14301611 None:intergenic 45.0%
ATAGGACCTGTAAGCAGAAC+AGG - chr2.3:14301352-14301371 None:intergenic 45.0%
ATATGATCCGGATCTACACG+TGG - chr2.3:14301757-14301776 None:intergenic 45.0%
ATCCTTCTCTGTTTGGTCCA+TGG - chr2.3:14300924-14300943 None:intergenic 45.0%
ATTGCTATGTGCAAAGGAGG+AGG - chr2.3:14300656-14300675 None:intergenic 45.0%
GATCTCATGAAACCACCTTC+AGG + chr2.3:14301127-14301146 MS.gene073193:CDS 45.0%
GGTAAACCTGTTCTGCTTAC+AGG + chr2.3:14301343-14301362 MS.gene073193:CDS 45.0%
TTGTTGGAGAGACGGAGAAA+TGG - chr2.3:14300710-14300729 None:intergenic 45.0%
! GGCTTAAGTGCTGCAAGAAA+TGG - chr2.3:14301535-14301554 None:intergenic 45.0%
! GGGATTCAAACATGGTTCTG+TGG + chr2.3:14301426-14301445 MS.gene073193:CDS 45.0%
AGCCATGGACCAAACAGAGA+AGG + chr2.3:14300919-14300938 MS.gene073193:CDS 50.0%
CCATGGCTGTAGCAATGAGA+GGG - chr2.3:14300907-14300926 None:intergenic 50.0%
GATGAATCAGGGAACCCTGA+AGG - chr2.3:14301145-14301164 None:intergenic 50.0%
GCAGCACTTAAGCCACCTAT+TGG + chr2.3:14301541-14301560 MS.gene073193:CDS 50.0%
GGAGCTGCTAGTATAACCGA+GGG + chr2.3:14301700-14301719 MS.gene073193:CDS 50.0%
GTTCTTGCCACGTGTAGATC+CGG + chr2.3:14301747-14301766 MS.gene073193:CDS 50.0%
TCCATGGCTGTAGCAATGAG+AGG - chr2.3:14300908-14300927 None:intergenic 50.0%
TGGAGCTGCTAGTATAACCG+AGG + chr2.3:14301699-14301718 MS.gene073193:CDS 50.0%
CCCTCTCATTGCTACAGCCA+TGG + chr2.3:14300904-14300923 MS.gene073193:CDS 55.0%
GAATCAGGGAACCCTGAAGG+TGG - chr2.3:14301142-14301161 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 14300644 14302020 14300644 ID=MS.gene073193
chr2.3 mRNA 14300644 14302020 14300644 ID=MS.gene073193.t1;Parent=MS.gene073193
chr2.3 exon 14300644 14302020 14300644 ID=MS.gene073193.t1.exon1;Parent=MS.gene073193.t1
chr2.3 CDS 14300644 14302020 14300644 ID=cds.MS.gene073193.t1;Parent=MS.gene073193.t1
Gene Sequence

>MS.gene073193

ATGGATTCTCCTCCTCCTTTGCACATAGCAATGTTTCCATGGTTTGCTATGGGACACTTAACTCCATTTCTCCGTCTCTCCAACAAATTAGCATTAAGAGGTCACAAAATCTCATTCTTCATCCCTAAAAACACACTCAACAAATTACAACATCTTAACCTTCATCCAAATCTTATTACCTTTTTTCCTATCACAGTTCCTCATGTTAATGGTCTTCCTCATGATGCTGAAACTACTTCAGATGTACCCTCTTCTTTATTCCCTCTCATTGCTACAGCCATGGACCAAACAGAGAAGGATATTGAACTTCTTCTATGGGAACTAAAGCCACAAATAGTTTTCTTTGATTTTCAATATTGGCTGCCAAACTTGACTCAAAAACTTGGTATCAAAAGTCTTCAATACTTGATATGGAATCCAATATCATCAGCTTACCTTGGAAATATACCAAGACATAGTCAAGGAAGATTTTTAACTGAATTTGATCTCATGAAACCACCTTCAGGGTTCCCTGATTCATCCATCAAGTTTTATTCGCATGAACTTCGAGCCCTAGTTTCCCACAGAAAAGTAGAATTTGGAAGTGGTGTTTTATTACATGATCGCTCTGACATAGGCACAAAGATTTCAGATGCAGTTGCTTTCAAAGGATGCATAGAAATTGATGGATTATATGCTGACTATCTTCAAACTGTTTTTGGTAAACCTGTTCTGCTTACAGGTCCTATTTTACCTGAGCCAACAAAAGCTACTTTAGAGGAAAAATGGTTAACATGGCTTAAGGGATTCAAACATGGTTCTGTGGTTTTTTGTGCATATGGAAGTGAAGGTCCATTAGAACAAGATCAATTTCAAGAGTTGTTACTTGGTCTAGAGTTAACAGGTTTTCCATTTCTTGCAGCACTTAAGCCACCTATTGGATTTGAGTCTATTGAAGAAGCTTTACCAGAAGGGTTCAATGAAAGGGTTAAAGGAAGAGGGATTGTTTATGGAAGTTGGATTCAACAACAATTGATTTTAGAACATCCTTCTGTTGGATGTTTCATAACACACTGTGGAGCTGCTAGTATAACCGAGGGACTTGTTAACACGTGTCAGTTGGTGTTCTTGCCACGTGTAGATCCGGATCATATCATGAATGCAAGAATGATGAGTAATAAGTTGAAGGTTGGTATAGAAGTTGAGAAAGGTGATGAAGATGAGTTGTTTACAAACGAAAATGTGTGCAAAGCTGTGAAGATTATGATGGATGATGAGATTGAGGTTGGAAGGGAAGTGAGAGCTAATCATGCTAAACTGAGAAACTTTTTATTGAGAAGCAATTTAGAATCTTCATGTGTTGATAATTTCTGTCAAAAACTCTATGATTTGCTCTAG

Protein sequence

>MS.gene073193.t1

MDSPPPLHIAMFPWFAMGHLTPFLRLSNKLALRGHKISFFIPKNTLNKLQHLNLHPNLITFFPITVPHVNGLPHDAETTSDVPSSLFPLIATAMDQTEKDIELLLWELKPQIVFFDFQYWLPNLTQKLGIKSLQYLIWNPISSAYLGNIPRHSQGRFLTEFDLMKPPSGFPDSSIKFYSHELRALVSHRKVEFGSGVLLHDRSDIGTKISDAVAFKGCIEIDGLYADYLQTVFGKPVLLTGPILPEPTKATLEEKWLTWLKGFKHGSVVFCAYGSEGPLEQDQFQELLLGLELTGFPFLAALKPPIGFESIEEALPEGFNERVKGRGIVYGSWIQQQLILEHPSVGCFITHCGAASITEGLVNTCQLVFLPRVDPDHIMNARMMSNKLKVGIEVEKGDEDELFTNENVCKAVKIMMDDEIEVGREVRANHAKLRNFLLRSNLESSCVDNFCQKLYDLL