AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene73860


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene73860.t1 MTR_4g079270 87.636 461 55 1 1 459 1 461 0.0 840
MS.gene73860.t1 MTR_4g079250 85.249 461 66 1 1 459 1 461 0.0 818
MS.gene73860.t1 MTR_2g083490 59.607 458 183 2 1 456 1 458 0.0 555
MS.gene73860.t1 MTR_2g014900 56.195 452 197 1 7 457 6 457 0.0 551
MS.gene73860.t1 MTR_2g083480 59.251 454 183 2 1 452 1 454 0.0 548
MS.gene73860.t1 MTR_2g083380 59.607 458 183 2 1 456 18 475 0.0 546
MS.gene73860.t1 MTR_2g083430 58.079 458 190 2 1 456 1 458 0.0 539
MS.gene73860.t1 MTR_2g083390 56.114 458 175 3 1 456 1 434 0.0 522
MS.gene73860.t1 MTR_2g083420 54.803 458 181 3 1 456 1 434 1.17e-179 509
MS.gene73860.t1 MTR_2g083360 43.681 451 149 5 7 456 28 374 1.27e-120 357
MS.gene73860.t1 MTR_4g079280 75.983 229 10 2 11 239 1 184 7.61e-120 348
MS.gene73860.t1 MTR_1g090270 40.611 458 256 9 7 455 14 464 7.29e-115 345
MS.gene73860.t1 MTR_2g086283 43.274 446 141 7 11 455 1 335 1.13e-114 340
MS.gene73860.t1 MTR_4g059370 41.520 342 178 7 122 456 66 392 6.36e-84 263
MS.gene73860.t1 MTR_2g008225 34.183 471 273 15 2 452 9 462 5.67e-70 230
MS.gene73860.t1 MTR_2g008220 34.249 473 270 16 2 452 8 461 2.98e-69 228
MS.gene73860.t1 MTR_4g123553 32.974 464 285 12 3 454 10 459 5.49e-67 222
MS.gene73860.t1 MTR_7g067330 31.466 464 266 17 2 453 3 426 3.25e-63 211
MS.gene73860.t1 MTR_6g042310 32.983 476 269 16 3 454 13 462 1.01e-62 211
MS.gene73860.t1 MTR_6g036650 32.211 475 285 12 1 454 11 469 1.04e-60 206
MS.gene73860.t1 MTR_7g067120 31.557 469 251 16 2 449 3 422 3.72e-59 200
MS.gene73860.t1 MTR_2g014930 38.966 290 95 5 17 305 9 217 6.42e-59 193
MS.gene73860.t1 MTR_2g046620 31.974 466 279 15 7 454 15 460 4.41e-58 198
MS.gene73860.t1 MTR_8g068360 29.895 475 302 15 2 457 6 468 1.23e-57 197
MS.gene73860.t1 MTR_2g008226 32.347 473 280 18 7 453 9 467 2.62e-57 196
MS.gene73860.t1 MTR_8g068340 30.556 468 305 14 2 455 6 467 1.23e-56 194
MS.gene73860.t1 MTR_8g068330 29.263 475 308 15 1 457 1 465 2.31e-56 194
MS.gene73860.t1 MTR_8g007565 30.258 466 302 9 6 454 5 464 2.45e-54 188
MS.gene73860.t1 MTR_8g007650 30.258 466 302 9 6 454 5 464 5.18e-54 187
MS.gene73860.t1 MTR_4g077960 30.670 463 269 16 17 454 1 436 7.68e-53 184
MS.gene73860.t1 MTR_3g435310 30.786 458 251 14 7 454 17 418 1.42e-50 177
MS.gene73860.t1 MTR_5g066410 29.526 464 283 9 11 454 1 440 3.99e-50 177
MS.gene73860.t1 MTR_1g090280 46.154 182 93 3 279 455 133 314 2.12e-47 166
MS.gene73860.t1 MTR_2g098430 27.352 457 295 14 9 437 7 454 4.73e-39 147
MS.gene73860.t1 MTR_8g066610 28.571 483 290 14 1 444 1 467 2.49e-37 143
MS.gene73860.t1 MTR_0009s0240 25.690 471 321 12 3 455 2 461 1.41e-34 135
MS.gene73860.t1 MTR_2g083440 56.250 112 39 3 347 456 9 112 1.42e-34 125
MS.gene73860.t1 MTR_8g071070 25.971 489 307 13 3 455 2 471 7.86e-34 133
MS.gene73860.t1 MTR_1g062380 26.892 502 282 17 3 446 11 485 8.44e-34 133
MS.gene73860.t1 MTR_7g117405 28.200 461 283 15 8 434 12 458 3.19e-33 131
MS.gene73860.t1 MTR_5g045970 26.844 488 299 20 3 446 11 484 6.73e-32 127
MS.gene73860.t1 MTR_4g485590 28.851 409 232 12 8 393 9 381 5.28e-31 124
MS.gene73860.t1 MTR_7g013180 25.551 454 280 14 8 435 5 426 1.73e-30 123
MS.gene73860.t1 MTR_7g102450 27.368 475 287 18 8 446 11 463 3.02e-30 122
MS.gene73860.t1 MTR_7g013220 26.115 471 286 19 8 446 5 445 6.41e-30 121
MS.gene73860.t1 MTR_5g087620 26.369 493 312 14 8 455 10 496 8.76e-30 121
MS.gene73860.t1 MTR_4g485620 27.473 455 281 15 24 444 5 444 2.16e-29 120
MS.gene73860.t1 MTR_4g024020 26.752 471 286 16 7 434 8 462 4.38e-28 117
MS.gene73860.t1 MTR_5g045960 26.494 502 298 17 6 457 7 487 5.28e-28 116
MS.gene73860.t1 MTR_7g013200 26.269 453 284 19 8 442 5 425 5.35e-28 115
MS.gene73860.t1 MTR_7g102490 25.545 505 303 18 7 456 8 494 2.06e-27 115
MS.gene73860.t1 MTR_7g102460 25.600 500 307 18 7 456 8 492 2.29e-27 114
MS.gene73860.t1 MTR_7g102550 25.413 484 307 17 8 450 9 479 2.56e-27 114
MS.gene73860.t1 MTR_7g102560 26.124 467 293 13 7 434 8 461 3.91e-27 114
MS.gene73860.t1 MTR_6g005600 25.571 438 287 7 8 418 6 431 5.08e-27 113
MS.gene73860.t1 MTR_4g031800 27.171 449 277 15 7 427 8 434 6.27e-27 113
MS.gene73860.t1 MTR_7g070740 24.406 463 306 15 3 431 6 458 1.16e-26 112
MS.gene73860.t1 MTR_5g035560 23.958 480 297 15 5 452 8 451 1.58e-25 109
MS.gene73860.t1 MTR_6g033725 27.015 459 274 18 9 432 5 437 1.90e-25 108
MS.gene73860.t1 MTR_8g027885 24.612 451 302 13 9 437 19 453 1.90e-25 108
MS.gene73860.t1 MTR_6g033625 25.339 442 278 16 9 417 5 427 2.30e-25 108
MS.gene73860.t1 MTR_7g070660 24.894 470 291 17 3 431 6 454 2.38e-25 108
MS.gene73860.t1 MTR_8g466240 25.721 416 265 14 1 393 1 395 2.45e-25 108
MS.gene73860.t1 MTR_5g035580 23.191 470 297 13 5 446 10 443 3.05e-25 108
MS.gene73860.t1 MTR_8g064870 27.416 445 269 16 5 414 8 433 5.88e-25 107
MS.gene73860.t1 MTR_4g485630 26.161 409 270 12 7 393 8 406 7.47e-25 107
MS.gene73860.t1 MTR_8g012635 33.333 198 115 2 236 419 242 436 7.93e-25 107
MS.gene73860.t1 MTR_1g107350 26.233 446 285 14 1 417 1 431 8.91e-25 107
MS.gene73860.t1 MTR_1g107375 26.696 457 284 15 1 433 1 430 1.11e-24 106
MS.gene73860.t1 MTR_1g107315 26.906 446 268 17 1 410 1 424 1.23e-24 106
MS.gene73860.t1 MTR_6g033675 25.885 452 291 15 9 432 5 440 1.45e-24 106
MS.gene73860.t1 MTR_2g046820 31.250 256 155 6 209 446 202 454 2.26e-24 105
MS.gene73860.t1 MTR_6g038220 25.847 472 294 15 8 457 11 448 3.03e-24 105
MS.gene73860.t1 MTR_3g049970 27.033 418 263 15 3 393 4 406 4.02e-24 105
MS.gene73860.t1 MTR_7g117170 27.826 460 274 18 9 433 16 452 4.85e-24 104
MS.gene73860.t1 MTR_0184s0030 31.053 190 118 3 259 437 261 448 5.15e-24 104
MS.gene73860.t1 MTR_2g059240 25.055 455 287 13 8 429 13 446 5.19e-24 104
MS.gene73860.t1 MTR_6g038240 25.522 431 276 14 8 417 11 417 5.64e-24 104
MS.gene73860.t1 MTR_1g032490 26.620 432 275 15 7 410 9 426 6.57e-24 104
MS.gene73860.t1 MTR_5g027210 27.698 278 167 5 207 451 207 483 8.43e-24 104
MS.gene73860.t1 MTR_0078s0060 24.512 461 292 15 6 433 4 441 1.46e-23 103
MS.gene73860.t1 MTR_8g009055 24.183 459 306 12 6 437 4 447 2.90e-23 102
MS.gene73860.t1 MTR_8g012730 31.220 205 126 2 228 418 69 272 2.94e-23 100
MS.gene73860.t1 MTR_7g013240 25.059 423 283 13 8 418 6 406 4.92e-23 101
MS.gene73860.t1 MTR_6g038300 24.000 450 292 16 8 434 11 433 5.31e-23 101
MS.gene73860.t1 MTR_8g009050 34.043 188 110 3 258 433 258 443 6.05e-23 101
MS.gene73860.t1 MTR_6g038200 25.157 477 292 16 8 457 11 449 6.66e-23 101
MS.gene73860.t1 MTR_8g027870 23.690 477 274 16 9 437 19 453 6.98e-23 101
MS.gene73860.t1 MTR_8g012650 32.143 196 116 2 236 417 242 434 1.06e-22 100
MS.gene73860.t1 MTR_4g117960 26.201 458 280 18 1 419 6 444 1.20e-22 100
MS.gene73860.t1 MTR_8g006730 24.494 445 298 14 8 425 6 439 1.40e-22 100
MS.gene73860.t1 MTR_8g012630 33.143 175 103 1 259 419 206 380 1.52e-22 99.8
MS.gene73860.t1 MTR_7g070940 23.128 454 308 13 1 425 1 442 1.52e-22 100
MS.gene73860.t1 MTR_7g070810 23.756 442 298 12 7 419 8 439 1.80e-22 100
MS.gene73860.t1 MTR_8g088560 24.468 470 318 15 5 454 7 459 4.42e-22 99.0
MS.gene73860.t1 MTR_6g035185 24.364 472 290 16 7 433 10 459 4.68e-22 99.0
MS.gene73860.t1 MTR_6g488280 33.889 180 106 4 259 425 258 437 6.09e-22 98.6
MS.gene73860.t1 MTR_0428s0010 33.889 180 106 4 259 425 258 437 6.09e-22 98.6
MS.gene73860.t1 MTR_0536s0010 25.164 457 290 16 2 425 9 446 6.11e-22 98.6
MS.gene73860.t1 MTR_6g033615 31.579 171 113 2 258 424 252 422 6.34e-22 98.6
MS.gene73860.t1 MTR_8g006270 25.934 455 259 19 8 417 6 427 7.65e-22 98.2
MS.gene73860.t1 MTR_4g117950 25.476 420 255 14 7 397 5 395 8.11e-22 98.2
MS.gene73860.t1 MTR_6g023665 33.333 180 107 4 259 425 265 444 8.67e-22 98.2
MS.gene73860.t1 MTR_2g046750 27.835 291 183 8 185 457 186 467 1.57e-21 97.4
MS.gene73860.t1 MTR_7g013260 33.146 178 109 4 259 436 253 420 1.86e-21 96.7
MS.gene73860.t1 MTR_7g070800 23.011 465 303 15 5 431 3 450 1.95e-21 97.1
MS.gene73860.t1 MTR_2g040530 27.005 374 237 11 92 446 100 456 2.54e-21 96.7
MS.gene73860.t1 MTR_1g019520 30.890 191 119 2 258 437 5 193 2.84e-21 92.4
MS.gene73860.t1 MTR_8g006710 33.333 180 107 4 259 425 259 438 3.04e-21 96.3
MS.gene73860.t1 MTR_4g094920 31.000 200 131 4 259 452 281 479 3.07e-21 96.7
MS.gene73860.t1 MTR_0288s0020 25.485 412 269 13 8 396 10 406 3.24e-21 96.3
MS.gene73860.t1 MTR_1g107360 25.806 434 262 16 9 410 12 417 3.26e-21 96.3
MS.gene73860.t1 MTR_6g038230 24.738 477 294 15 8 457 11 449 3.29e-21 96.3
MS.gene73860.t1 MTR_2g034990 25.499 451 294 14 7 425 10 450 3.88e-21 96.3
MS.gene73860.t1 MTR_0184s0040 30.159 189 120 3 259 437 275 461 3.92e-21 96.3
MS.gene73860.t1 MTR_0078s0190 30.159 189 120 3 259 437 275 461 3.92e-21 96.3
MS.gene73860.t1 MTR_0078s0010 31.892 185 114 3 259 433 260 442 3.99e-21 96.3
MS.gene73860.t1 MTR_7g046490 31.633 196 119 3 250 430 244 439 4.00e-21 95.9
MS.gene73860.t1 MTR_4g117980 24.783 460 281 19 7 422 10 448 4.29e-21 96.3
MS.gene73860.t1 MTR_8g064880 26.379 417 259 14 9 393 12 412 5.12e-21 95.9
MS.gene73860.t1 MTR_8g009073 28.517 263 164 6 211 456 77 332 6.20e-21 94.0
MS.gene73860.t1 MTR_8g009073 28.626 262 163 6 211 455 206 460 6.53e-21 95.5
MS.gene73860.t1 MTR_7g071040 24.897 486 301 17 3 454 12 467 6.75e-21 95.5
MS.gene73860.t1 MTR_8g012745 31.771 192 114 3 244 419 243 433 7.05e-21 95.5
MS.gene73860.t1 MTR_7g080940 24.722 449 277 14 12 434 17 430 7.85e-21 95.1
MS.gene73860.t1 MTR_4g095008 31.373 204 130 6 259 456 266 465 7.92e-21 95.5
MS.gene73860.t1 MTR_8g044140 24.057 424 272 12 41 426 11 422 9.05e-21 95.1
MS.gene73860.t1 MTR_4g082810 25.472 424 235 15 7 383 6 395 1.00e-20 94.4
MS.gene73860.t1 MTR_4g128720 30.802 237 150 6 202 436 211 435 1.03e-20 94.7
MS.gene73860.t1 MTR_7g070610 32.105 190 115 4 256 433 276 463 1.16e-20 94.7
MS.gene73860.t1 MTR_8g077590 31.443 194 110 2 241 425 244 423 1.19e-20 94.7
MS.gene73860.t1 MTR_7g102520 33.333 192 116 3 254 434 276 466 1.32e-20 94.7
MS.gene73860.t1 MTR_8g032950 25.330 454 289 18 7 425 11 449 1.43e-20 94.7
MS.gene73860.t1 MTR_5g070040 27.228 404 256 15 17 396 20 409 1.83e-20 94.0
MS.gene73860.t1 MTR_6g033660 25.112 446 301 15 9 432 5 439 2.27e-20 94.0
MS.gene73860.t1 MTR_8g006260 30.303 198 124 5 241 425 246 442 3.02e-20 93.6
MS.gene73860.t1 MTR_8g009067 30.208 192 122 2 258 439 140 329 3.06e-20 92.0
MS.gene73860.t1 MTR_8g074550 24.886 438 267 15 1 392 1 422 3.36e-20 93.6
MS.gene73860.t1 MTR_8g009067 30.208 192 122 2 258 439 258 447 3.47e-20 93.2
MS.gene73860.t1 MTR_7g070910 22.081 471 308 14 3 431 6 459 4.81e-20 92.8
MS.gene73860.t1 MTR_2g035040 31.414 191 115 4 258 433 174 363 6.77e-20 91.7
MS.gene73860.t1 MTR_7g070930 22.629 464 314 13 3 431 9 462 7.40e-20 92.4
MS.gene73860.t1 MTR_1g019510 29.319 191 122 2 258 437 256 444 8.01e-20 92.0
MS.gene73860.t1 MTR_2g035020 24.609 447 292 14 7 419 10 445 1.05e-19 92.0
MS.gene73860.t1 MTR_3g009510 30.366 191 117 3 258 434 266 454 1.47e-19 91.3
MS.gene73860.t1 MTR_8g008990 31.222 221 133 5 234 437 231 449 1.55e-19 91.3
MS.gene73860.t1 MTR_8g083280 33.708 178 106 5 259 434 272 439 1.74e-19 91.3
MS.gene73860.t1 MTR_7g070860 22.727 462 290 15 7 431 6 437 1.88e-19 91.3
MS.gene73860.t1 MTR_5g098930 22.689 476 300 17 4 436 1 451 2.26e-19 90.9
MS.gene73860.t1 MTR_7g047030 30.189 212 131 5 259 455 260 469 2.44e-19 90.9
MS.gene73860.t1 MTR_7g047270 30.189 212 131 5 259 455 260 469 2.44e-19 90.9
MS.gene73860.t1 MTR_7g080935 24.454 458 283 16 5 434 8 430 2.66e-19 90.5
MS.gene73860.t1 MTR_0536s0020 30.939 181 109 3 258 422 266 446 3.31e-19 90.5
MS.gene73860.t1 MTR_8g465670 23.725 451 269 15 9 415 8 427 3.75e-19 90.1
MS.gene73860.t1 MTR_5g090580 26.493 268 165 6 206 445 204 467 4.62e-19 89.7
MS.gene73860.t1 MTR_8g083290 32.022 178 114 4 259 434 269 441 4.90e-19 89.7
MS.gene73860.t1 MTR_4g485640 30.000 220 134 6 199 401 388 604 5.22e-19 90.5
MS.gene73860.t1 MTR_4g117890 30.601 183 107 4 258 422 261 441 5.64e-19 89.7
MS.gene73860.t1 MTR_4g108250 24.301 465 307 13 1 426 1 459 5.76e-19 89.7
MS.gene73860.t1 MTR_8g056740 27.149 221 147 4 220 429 121 338 6.42e-19 89.0
MS.gene73860.t1 MTR_1g040310 23.179 453 289 16 7 419 14 447 6.53e-19 89.7
MS.gene73860.t1 MTR_6g035265 29.891 184 113 3 258 425 260 443 7.27e-19 89.4
MS.gene73860.t1 MTR_3g079480 24.091 440 257 16 8 396 21 434 8.51e-19 89.4
MS.gene73860.t1 MTR_5g090630 23.505 485 293 18 8 445 5 458 1.05e-18 88.6
MS.gene73860.t1 MTR_6g014020 29.947 187 118 4 253 439 284 457 1.22e-18 88.6
MS.gene73860.t1 MTR_3g069710 24.190 463 308 14 9 452 13 451 1.44e-18 88.2
MS.gene73860.t1 MTR_5g019580 30.000 190 117 3 258 431 266 455 1.50e-18 88.6
MS.gene73860.t1 MTR_5g019580 30.000 190 117 3 258 431 290 479 1.66e-18 88.6
MS.gene73860.t1 MTR_4g118000 26.291 426 246 18 7 400 13 402 1.70e-18 88.2
MS.gene73860.t1 MTR_1g029540 31.795 195 115 4 215 394 206 397 2.06e-18 87.8
MS.gene73860.t1 MTR_1g107285 32.632 190 105 5 217 393 220 399 2.08e-18 87.8
MS.gene73860.t1 MTR_6g013900 32.571 175 106 5 253 425 283 447 2.90e-18 87.4
MS.gene73860.t1 MTR_3g084530 27.869 244 147 7 223 447 238 471 3.67e-18 87.0
MS.gene73860.t1 MTR_7g055710 28.947 190 122 4 253 431 271 458 3.69e-18 87.4
MS.gene73860.t1 MTR_5g098960 35.795 176 98 7 259 431 262 425 3.82e-18 87.0
MS.gene73860.t1 MTR_7g012120 31.818 176 105 3 259 419 272 447 4.90e-18 86.7
MS.gene73860.t1 MTR_8g008970 30.412 194 123 2 258 441 258 449 4.92e-18 87.4
MS.gene73860.t1 MTR_8g008970 31.481 162 104 2 258 418 597 752 4.99e-15 78.2
MS.gene73860.t1 MTR_8g009063 30.208 192 120 2 258 437 265 454 4.97e-18 86.7
MS.gene73860.t1 MTR_7g470610 29.518 166 112 3 253 416 128 290 5.34e-18 84.7
MS.gene73860.t1 MTR_7g070583 29.518 166 112 3 253 416 128 290 5.34e-18 84.7
MS.gene73860.t1 MTR_7g080950 29.189 185 122 3 253 437 253 428 5.70e-18 86.3
MS.gene73860.t1 MTR_5g090610 27.536 276 166 9 199 445 183 453 5.94e-18 86.3
MS.gene73860.t1 MTR_3g479520 23.265 490 320 15 8 459 15 486 6.43e-18 86.3
MS.gene73860.t1 MTR_1g107380 30.723 166 110 4 259 422 279 441 7.78e-18 86.3
MS.gene73860.t1 MTR_8g006220 23.094 459 270 15 9 415 7 434 8.00e-18 86.3
MS.gene73860.t1 MTR_6g035295 22.395 451 307 12 6 422 10 451 8.12e-18 86.3
MS.gene73860.t1 MTR_3g084520 29.189 185 126 3 254 434 267 450 8.34e-18 85.9
MS.gene73860.t1 MTR_5g090700 28.641 206 127 4 259 445 265 469 1.21e-17 85.5
MS.gene73860.t1 MTR_5g090620 25.746 268 165 6 199 436 196 459 1.32e-17 85.5
MS.gene73860.t1 MTR_4g008630 30.583 206 132 3 199 393 194 399 1.43e-17 85.1
MS.gene73860.t1 MTR_2g008210 31.638 177 114 4 259 434 284 454 1.75e-17 85.1
MS.gene73860.t1 MTR_3g084540 28.163 245 146 8 223 447 238 472 1.77e-17 85.1
MS.gene73860.t1 MTR_6g013920 28.713 202 119 5 253 454 283 459 1.86e-17 85.1
MS.gene73860.t1 MTR_6g013440 27.542 236 149 6 197 418 217 444 2.38e-17 84.7
MS.gene73860.t1 MTR_4g128690 28.632 234 153 6 202 433 208 429 2.83e-17 84.3
MS.gene73860.t1 MTR_5g016660 22.727 484 318 18 13 455 15 483 4.99e-17 83.6
MS.gene73860.t1 MTR_5g090670 24.549 277 175 5 199 445 197 469 5.35e-17 83.6
MS.gene73860.t1 MTR_6g014200 31.250 144 97 2 253 396 281 422 6.55e-17 83.2
MS.gene73860.t1 MTR_5g040030 22.103 466 312 14 6 433 12 464 6.88e-17 83.2
MS.gene73860.t1 MTR_8g090095 25.822 426 244 13 13 397 30 424 7.29e-17 83.2
MS.gene73860.t1 MTR_7g070870 22.651 415 288 12 7 402 18 418 9.95e-17 82.8
MS.gene73860.t1 MTR_6g014170 30.303 165 109 3 253 417 266 424 1.06e-16 82.8
MS.gene73860.t1 MTR_5g004940 29.808 208 125 4 253 455 193 384 1.09e-16 82.0
MS.gene73860.t1 MTR_5g039900 21.212 462 310 11 5 426 10 457 1.15e-16 82.8
MS.gene73860.t1 MTR_7g070780 28.191 188 122 4 255 431 273 458 1.19e-16 82.4
MS.gene73860.t1 MTR_5g067170 30.319 188 116 3 247 419 256 443 1.38e-16 82.4
MS.gene73860.t1 MTR_5g031830 22.819 447 303 10 5 423 9 441 1.45e-16 82.4
MS.gene73860.t1 MTR_6g014040 30.986 142 96 2 253 394 285 424 1.68e-16 82.0
MS.gene73860.t1 MTR_4g082820 30.270 185 112 3 259 436 264 438 1.75e-16 82.0
MS.gene73860.t1 MTR_7g071050 22.991 448 273 17 3 425 8 408 1.84e-16 81.6
MS.gene73860.t1 MTR_3g479610 29.861 144 100 1 253 396 116 258 2.04e-16 80.5
MS.gene73860.t1 MTR_3g008010 32.143 140 89 3 259 396 288 423 2.17e-16 81.6
MS.gene73860.t1 MTR_3g069690 29.670 182 121 4 253 433 251 426 2.29e-16 81.6
MS.gene73860.t1 MTR_0891s0010 29.710 138 96 1 259 396 99 235 3.50e-16 79.3
MS.gene73860.t1 MTR_6g014310 28.037 214 136 5 197 396 217 426 3.72e-16 80.9
MS.gene73860.t1 MTR_3g479490 30.435 138 95 1 259 396 283 419 4.10e-16 80.9
MS.gene73860.t1 MTR_5g090660 27.184 206 130 4 259 445 261 465 6.57e-16 80.5
MS.gene73860.t1 MTR_1g107365 28.571 210 121 5 217 410 251 447 6.77e-16 80.1
MS.gene73860.t1 MTR_5g029800 34.247 146 90 2 258 397 265 410 8.03e-16 80.1
MS.gene73860.t1 MTR_6g014150 30.822 146 95 3 253 396 281 422 1.06e-15 79.7
MS.gene73860.t1 MTR_6g014250 30.822 146 95 3 253 396 282 423 1.14e-15 79.3
MS.gene73860.t1 MTR_5g075440 25.207 242 160 5 207 437 205 436 1.39e-15 79.0
MS.gene73860.t1 MTR_6g014240 27.179 195 131 4 206 396 205 392 1.55e-15 79.0
MS.gene73860.t1 MTR_7g011470 28.415 183 119 5 253 433 266 438 1.59e-15 79.0
MS.gene73860.t1 MTR_5g058320 24.605 443 278 18 8 418 10 428 1.84e-15 79.0
MS.gene73860.t1 MTR_7g011470 28.415 183 119 5 253 433 270 442 1.91e-15 78.6
MS.gene73860.t1 MTR_8g007585 30.822 146 95 3 253 396 196 337 2.67e-15 77.8
MS.gene73860.t1 MTR_3g009490 32.121 165 96 4 284 434 4 166 3.20e-15 74.3
MS.gene73860.t1 MTR_6g014220 31.034 145 96 3 253 396 282 423 3.44e-15 78.2
MS.gene73860.t1 MTR_6g014190 29.167 144 100 2 253 396 91 232 3.96e-15 76.3
MS.gene73860.t1 MTR_6g014050 32.192 146 93 3 253 396 285 426 4.03e-15 77.8
MS.gene73860.t1 MTR_5g031860 23.371 445 296 12 8 423 12 440 4.88e-15 77.4
MS.gene73860.t1 MTR_5g090600 24.812 266 167 7 200 445 194 446 5.17e-15 77.4
MS.gene73860.t1 MTR_6g013450 24.609 447 287 16 8 417 10 443 5.32e-15 77.4
MS.gene73860.t1 MTR_6g014270 30.137 146 96 3 253 396 283 424 7.68e-15 77.0
MS.gene73860.t1 MTR_6g014290 29.452 146 97 3 253 396 282 423 1.11e-14 76.3
MS.gene73860.t1 MTR_6g011340 29.861 144 99 2 253 396 284 425 1.33e-14 76.3
MS.gene73860.t1 MTR_4g064987 25.412 425 246 21 8 397 8 396 1.48e-14 75.9
MS.gene73860.t1 MTR_4g064987 25.404 433 242 21 8 397 8 402 2.04e-14 75.5
MS.gene73860.t1 MTR_5g464760 31.618 136 91 2 259 394 290 423 2.41e-14 75.5
MS.gene73860.t1 MTR_6g013990 28.472 144 101 2 253 396 282 423 2.88e-14 75.1
MS.gene73860.t1 MTR_3g479470 24.356 427 271 17 8 396 13 425 3.01e-14 75.1
MS.gene73860.t1 MTR_5g070090 27.236 246 157 9 200 434 202 436 3.58e-14 74.7
MS.gene73860.t1 MTR_5g016480 26.425 193 138 3 259 448 275 466 7.27e-14 73.9
MS.gene73860.t1 MTR_8g059425 28.767 146 98 3 253 396 282 423 7.99e-14 73.9
MS.gene73860.t1 MTR_2086s0010 30.973 113 77 1 284 396 6 117 1.09e-13 69.7
MS.gene73860.t1 MTR_1996s0010 30.973 113 77 1 284 396 6 117 1.09e-13 69.7
MS.gene73860.t1 MTR_7g080900 30.573 157 102 2 259 415 266 415 1.36e-13 72.8
MS.gene73860.t1 MTR_4g094220 30.986 142 91 3 258 396 287 424 1.49e-13 72.8
MS.gene73860.t1 MTR_6g014187 22.877 424 284 13 8 396 10 425 2.10e-13 72.4
MS.gene73860.t1 MTR_0477s0010 30.137 146 96 3 253 396 121 262 3.07e-13 70.9
MS.gene73860.t1 MTR_5g464810 31.618 136 91 2 259 394 288 421 3.22e-13 72.0
MS.gene73860.t1 MTR_5g064240 31.618 136 91 2 259 394 288 421 3.22e-13 72.0
MS.gene73860.t1 MTR_5g072820 25.620 242 152 5 207 434 199 426 3.63e-13 71.6
MS.gene73860.t1 MTR_5g031840 23.503 451 287 18 8 423 5 432 3.98e-13 71.6
MS.gene73860.t1 MTR_8g028755 25.468 267 155 9 162 425 9 234 4.82e-13 68.9
MS.gene73860.t1 MTR_6g013960 27.397 146 100 3 253 396 284 425 6.40e-13 70.9
MS.gene73860.t1 MTR_8g009840 27.111 225 137 6 215 418 273 491 1.18e-12 70.1
MS.gene73860.t1 MTR_7g039550 25.217 230 156 5 199 419 3 225 1.39e-12 68.2
MS.gene73860.t1 MTR_0036s0220 23.753 421 276 16 8 394 12 421 1.52e-12 69.7
MS.gene73860.t1 MTR_5g072860 23.105 277 181 6 172 434 185 443 5.31e-12 68.2
MS.gene73860.t1 MTR_6g014300 28.346 127 85 3 272 396 289 411 5.78e-12 67.8
MS.gene73860.t1 MTR_8g043470 28.000 150 104 3 247 396 178 323 2.35e-11 65.5
MS.gene73860.t1 MTR_5g072810 20.742 458 296 14 8 435 12 432 6.96e-11 64.3
MS.gene73860.t1 MTR_5g072830 23.333 240 156 5 207 432 199 424 7.06e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene73860.t1 AT5G54010 44.934 454 241 3 5 457 3 448 1.41e-148 431
MS.gene73860.t1 AT5G54060 47.505 461 231 6 5 457 10 467 4.88e-145 423
MS.gene73860.t1 AT4G27570 44.079 456 239 4 7 458 6 449 6.81e-144 419
MS.gene73860.t1 AT4G27560 43.640 456 241 4 7 458 6 449 1.49e-141 413
MS.gene73860.t1 AT5G53990 43.764 457 234 4 5 456 3 441 1.10e-138 406
MS.gene73860.t1 AT3G29630 42.484 459 246 5 5 459 3 447 1.20e-137 403
MS.gene73860.t1 AT1G64910 42.325 456 248 3 6 460 4 445 4.25e-136 399
MS.gene73860.t1 AT2G22930 43.833 454 232 4 6 454 4 439 4.34e-136 399
MS.gene73860.t1 AT1G64920 42.637 455 242 4 7 456 5 445 6.66e-134 394
MS.gene73860.t1 AT4G09500 42.163 453 239 5 7 454 5 439 3.25e-131 387
MS.gene73860.t1 AT3G29630 41.886 456 227 6 5 459 3 421 1.27e-130 384
MS.gene73860.t1 AT1G50580 39.913 461 255 5 5 460 3 446 8.15e-123 365
MS.gene73860.t1 AT4G09500 40.929 452 221 6 7 454 5 414 1.05e-121 361
MS.gene73860.t1 AT5G49690 34.125 463 270 16 7 453 9 452 2.47e-71 233
MS.gene73860.t1 AT2G22590 33.191 467 281 18 5 452 12 466 5.52e-67 222
MS.gene73860.t1 AT5G65550 31.277 470 293 15 7 458 8 465 1.48e-60 205
MS.gene73860.t1 AT2G22930 39.640 222 112 3 6 223 4 207 9.46e-47 163
MS.gene73860.t1 AT2G22930 39.506 81 49 0 374 454 207 287 1.06e-14 75.1
MS.gene73860.t1 AT2G31790 27.484 473 291 14 8 452 8 456 8.56e-35 135
MS.gene73860.t1 AT1G73880 27.004 474 301 14 8 456 14 467 1.75e-31 126
MS.gene73860.t1 AT2G31750 25.304 494 303 13 1 460 1 462 1.27e-30 124
MS.gene73860.t1 AT1G51210 26.303 403 255 10 8 393 20 397 1.44e-30 123
MS.gene73860.t1 AT2G31750 25.926 486 294 15 1 452 1 454 2.33e-30 122
MS.gene73860.t1 AT5G03490 25.282 443 291 11 8 433 19 438 3.32e-30 122
MS.gene73860.t1 AT1G05680 25.885 452 279 15 8 432 6 428 1.41e-29 120
MS.gene73860.t1 AT3G53150 26.681 476 289 17 7 434 21 484 3.26e-29 120
MS.gene73860.t1 AT2G36780 26.872 454 291 13 6 425 12 458 5.51e-28 116
MS.gene73860.t1 AT2G36760 26.539 471 289 17 4 434 10 463 8.23e-28 116
MS.gene73860.t1 AT2G16890 24.276 449 305 14 8 434 9 444 1.44e-27 115
MS.gene73860.t1 AT1G05675 26.049 453 277 14 8 432 6 428 1.88e-27 114
MS.gene73860.t1 AT5G12890 24.516 465 302 15 6 435 8 458 2.58e-27 114
MS.gene73860.t1 AT1G10400 26.294 483 297 20 4 449 3 463 4.67e-27 113
MS.gene73860.t1 AT2G15480 24.026 462 307 11 7 434 9 460 9.28e-27 113
MS.gene73860.t1 AT2G15490 23.760 484 331 10 7 460 6 481 1.29e-26 112
MS.gene73860.t1 AT4G34138 25.562 489 307 15 4 454 7 476 1.94e-26 112
MS.gene73860.t1 AT2G15490 23.819 487 330 11 7 460 6 484 3.55e-26 111
MS.gene73860.t1 AT2G36770 25.373 469 301 16 7 439 13 468 4.07e-26 111
MS.gene73860.t1 AT2G15480 24.898 490 318 14 7 460 9 484 5.48e-26 110
MS.gene73860.t1 AT2G16890 24.178 426 290 13 8 411 9 423 7.31e-26 109
MS.gene73860.t1 AT2G36750 25.107 466 295 14 7 434 9 458 2.84e-25 108
MS.gene73860.t1 AT2G18570 29.084 251 153 5 202 432 197 442 5.44e-25 107
MS.gene73860.t1 AT3G46670 24.318 440 300 12 8 435 9 427 1.65e-24 105
MS.gene73860.t1 AT2G36800 26.767 467 278 17 5 425 9 457 1.68e-24 106
MS.gene73860.t1 AT4G34131 34.807 181 110 3 259 434 281 458 2.39e-24 105
MS.gene73860.t1 AT4G34135 24.831 443 287 15 7 414 10 441 8.49e-24 104
MS.gene73860.t1 AT4G36770 33.831 201 117 4 259 444 256 455 1.62e-23 103
MS.gene73860.t1 AT5G14860 23.469 490 314 16 5 450 5 477 2.93e-23 102
MS.gene73860.t1 AT2G29730 35.359 181 106 4 259 435 268 441 7.92e-23 101
MS.gene73860.t1 AT2G29710 27.578 446 286 15 13 435 10 441 1.06e-22 100
MS.gene73860.t1 AT5G59590 29.200 250 165 6 210 452 205 449 2.32e-22 99.8
MS.gene73860.t1 AT5G59580 28.295 258 173 6 203 453 196 448 2.67e-22 99.4
MS.gene73860.t1 AT3G16520 23.864 440 308 10 9 429 6 437 5.76e-22 98.6
MS.gene73860.t1 AT3G16520 23.864 440 308 10 9 429 6 437 6.19e-22 98.6
MS.gene73860.t1 AT3G16520 23.864 440 308 10 9 429 6 437 6.31e-22 98.2
MS.gene73860.t1 AT5G26310 24.230 487 302 17 8 454 7 466 1.40e-21 97.4
MS.gene73860.t1 AT2G18560 28.141 199 129 3 243 432 159 352 1.51e-21 96.3
MS.gene73860.t1 AT1G07250 30.303 264 169 7 205 454 212 474 5.36e-21 95.9
MS.gene73860.t1 AT5G66690 24.786 468 278 19 8 433 7 442 7.48e-21 95.5
MS.gene73860.t1 AT3G46660 24.658 438 301 14 9 435 15 434 1.05e-20 94.7
MS.gene73860.t1 AT3G53160 24.899 494 302 19 1 447 1 472 1.39e-20 94.7
MS.gene73860.t1 AT1G01420 23.656 465 287 14 8 433 8 443 1.50e-20 94.4
MS.gene73860.t1 AT1G01420 23.656 465 287 14 8 433 11 446 1.80e-20 94.4
MS.gene73860.t1 AT5G38040 25.000 456 299 18 16 452 18 449 3.45e-20 93.2
MS.gene73860.t1 AT3G50740 23.163 449 304 12 8 425 7 445 5.56e-20 92.8
MS.gene73860.t1 AT4G01070 30.645 186 116 3 259 433 261 444 9.65e-20 92.0
MS.gene73860.t1 AT4G15280 29.614 233 139 6 245 457 280 507 1.71e-19 91.3
MS.gene73860.t1 AT4G15280 29.614 233 139 6 245 457 248 475 1.96e-19 91.3
MS.gene73860.t1 AT2G36970 29.614 233 153 6 207 435 224 449 2.65e-19 90.9
MS.gene73860.t1 AT3G21790 27.839 273 173 6 203 452 207 478 3.27e-19 90.5
MS.gene73860.t1 AT2G29740 30.317 221 142 6 209 418 221 440 7.36e-19 89.4
MS.gene73860.t1 AT3G21760 27.586 261 162 7 202 437 207 465 1.08e-18 89.0
MS.gene73860.t1 AT4G15260 27.650 217 135 4 259 457 144 356 1.65e-18 87.0
MS.gene73860.t1 AT3G11340 26.778 239 160 6 206 435 195 427 1.92e-18 87.8
MS.gene73860.t1 AT5G05870 27.652 264 171 9 206 457 204 459 2.15e-18 87.8
MS.gene73860.t1 AT4G15500 24.000 425 269 16 1 395 1 401 3.43e-18 87.4
MS.gene73860.t1 AT3G21800 28.512 242 152 6 199 425 199 434 7.15e-18 86.3
MS.gene73860.t1 AT2G43820 25.054 463 308 17 8 453 7 447 8.04e-18 85.9
MS.gene73860.t1 AT1G07240 30.909 220 138 6 227 435 242 458 8.27e-18 86.3
MS.gene73860.t1 AT1G06000 26.389 288 178 7 158 411 105 392 8.57e-18 85.9
MS.gene73860.t1 AT3G21780 26.259 278 182 6 199 454 194 470 9.60e-18 85.9
MS.gene73860.t1 AT4G14090 29.442 197 130 5 253 446 255 445 1.09e-17 85.5
MS.gene73860.t1 AT3G46700 22.965 479 295 16 8 457 9 442 1.20e-17 85.5
MS.gene73860.t1 AT4G15480 32.639 144 94 3 254 395 275 417 1.64e-17 85.1
MS.gene73860.t1 AT3G21560 23.810 420 272 14 8 397 12 413 1.69e-17 85.1
MS.gene73860.t1 AT2G30150 26.718 262 168 7 207 456 207 456 1.92e-17 84.7
MS.gene73860.t1 AT2G30150 26.718 262 168 7 207 456 191 440 2.23e-17 84.7
MS.gene73860.t1 AT2G29750 33.696 184 104 5 247 426 265 434 3.88e-17 84.0
MS.gene73860.t1 AT3G46680 24.009 454 296 14 8 443 9 431 4.72e-17 83.6
MS.gene73860.t1 AT2G30140 22.426 437 309 10 8 434 13 429 4.85e-17 83.6
MS.gene73860.t1 AT1G07260 29.108 213 139 5 236 437 245 456 9.56e-17 82.8
MS.gene73860.t1 AT2G36790 34.021 194 109 4 247 425 268 457 1.21e-16 82.8
MS.gene73860.t1 AT2G43840 25.478 471 296 19 8 453 7 447 1.40e-16 82.0
MS.gene73860.t1 AT5G38010 28.571 252 164 7 210 452 209 453 1.66e-16 82.0
MS.gene73860.t1 AT3G21750 30.000 190 116 4 259 436 257 441 1.84e-16 82.0
MS.gene73860.t1 AT4G15490 21.628 430 277 16 1 395 1 405 1.97e-16 82.0
MS.gene73860.t1 AT2G30140 22.603 438 306 12 8 434 13 428 2.05e-16 81.6
MS.gene73860.t1 AT1G78270 27.746 173 117 3 223 393 256 422 2.37e-16 81.6
MS.gene73860.t1 AT3G22250 34.940 166 89 6 259 418 276 428 3.65e-16 80.9
MS.gene73860.t1 AT5G05880 23.515 421 276 13 1 397 1 399 4.76e-16 80.5
MS.gene73860.t1 AT3G46690 24.877 406 263 16 8 393 9 392 5.43e-16 80.5
MS.gene73860.t1 AT5G05860 23.246 456 301 15 5 443 6 429 7.44e-16 80.1
MS.gene73860.t1 AT1G01390 23.617 470 268 16 1 418 1 431 7.52e-16 80.1
MS.gene73860.t1 AT2G43840 23.203 487 287 18 8 453 7 447 8.26e-16 79.7
MS.gene73860.t1 AT1G01390 29.167 192 119 3 242 418 259 448 8.90e-16 80.1
MS.gene73860.t1 AT3G02100 23.077 455 296 15 8 436 13 439 1.29e-15 79.3
MS.gene73860.t1 AT1G30530 27.969 261 171 7 202 457 204 452 1.41e-15 79.0
MS.gene73860.t1 AT1G05530 22.348 443 313 13 8 434 5 432 2.12e-15 78.6
MS.gene73860.t1 AT1G22360 30.682 176 114 4 259 434 287 454 2.19e-15 78.6
MS.gene73860.t1 AT2G28080 23.981 417 270 15 12 400 24 421 4.19e-15 77.8
MS.gene73860.t1 AT1G22360 32.609 138 91 2 259 396 287 422 4.72e-15 77.4
MS.gene73860.t1 AT2G23250 33.793 145 91 3 252 396 237 376 5.23e-15 77.4
MS.gene73860.t1 AT1G05560 25.296 253 148 9 236 460 276 515 6.48e-15 77.4
MS.gene73860.t1 AT3G55710 32.911 158 99 4 259 414 263 415 7.54e-15 77.0
MS.gene73860.t1 AT5G05890 26.108 203 141 4 199 394 196 396 7.78e-15 77.0
MS.gene73860.t1 AT1G05560 25.296 253 148 9 236 460 226 465 1.28e-14 76.3
MS.gene73860.t1 AT1G22400 33.094 139 89 3 259 396 291 426 1.39e-14 76.3
MS.gene73860.t1 AT5G17050 27.225 191 123 5 244 434 260 434 2.53e-14 75.5
MS.gene73860.t1 AT2G23260 24.289 457 275 18 8 430 10 429 3.36e-14 74.7
MS.gene73860.t1 AT4G15550 29.189 185 118 5 259 434 271 451 3.68e-14 74.7
MS.gene73860.t1 AT1G22380 31.884 138 92 2 259 396 290 425 5.27e-14 74.3
MS.gene73860.t1 AT1G24100 27.000 200 134 5 259 457 268 456 5.87e-14 74.3
MS.gene73860.t1 AT5G17030 24.521 261 180 7 202 456 207 456 8.82e-14 73.6
MS.gene73860.t1 AT5G05900 27.322 183 121 4 217 394 216 391 1.02e-13 73.6
MS.gene73860.t1 AT3G55700 27.536 207 128 5 246 449 245 432 1.33e-13 73.2
MS.gene73860.t1 AT1G22340 28.777 139 96 2 259 396 290 426 1.35e-13 73.2
MS.gene73860.t1 AT1G22370 23.272 434 262 17 8 396 13 420 3.58e-13 71.6
MS.gene73860.t1 AT2G26480 27.660 188 120 6 259 443 253 427 1.38e-12 69.7
MS.gene73860.t1 AT1G22370 26.471 204 132 4 204 396 54 250 1.46e-12 68.9
MS.gene73860.t1 AT3G46720 28.736 174 113 3 253 426 250 412 1.73e-12 69.7
MS.gene73860.t1 AT3G46650 23.558 416 244 15 8 396 10 378 4.14e-12 68.2
MS.gene73860.t1 AT5G17040 26.000 200 136 5 259 457 253 441 3.73e-11 65.5
MS.gene73860.t1 AT5G17040 25.871 201 137 5 258 457 150 339 7.46e-11 63.9

Find 85 sgRNAs with CRISPR-Local

Find 103 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTCATCCAAAACAGAATT+TGG 0.066775 4.2:-31013087 None:intergenic
ACCCTTTCCGAAAACCTTTC+TGG 0.118748 4.2:-31013291 None:intergenic
ATTAATTCTTGAAATGTATT+TGG 0.171443 4.2:-31013186 None:intergenic
GAGATTGAATGGTTCTAATT+TGG 0.173208 4.2:-31012485 None:intergenic
GGTTCAGCAACAATTGATTT+TGG 0.174430 4.2:+31013344 MS.gene73860:CDS
GAAGGAAGAGGTGTTGTTTA+TGG 0.254621 4.2:+31013315 MS.gene73860:CDS
TGAAAACCCAAATTCTGTTT+TGG 0.266973 4.2:+31013080 MS.gene73860:CDS
ACATTTCAAGAATTAATTCT+TGG 0.283231 4.2:+31013192 MS.gene73860:CDS
AATTTGGATTGTGCTGATTT+AGG 0.284535 4.2:-31012469 None:intergenic
CTAAAGCCTTTGCAGCTAAA+AGG 0.291713 4.2:+31012890 MS.gene73860:CDS
TTCATTACACATTGTGGTTC+AGG 0.292499 4.2:+31013387 MS.gene73860:CDS
GCAGCTTTGAAACCTCCTTT+TGG 0.302532 4.2:+31013243 MS.gene73860:CDS
GATCTCATGGAACCTCCTTC+TGG 0.333353 4.2:+31012829 MS.gene73860:CDS
TCAGTTGTTTATTGTTGTTT+TGG 0.335096 4.2:+31013144 MS.gene73860:CDS
ATTCTTGGTCTTGAGTTAAC+TGG 0.339940 4.2:+31013207 MS.gene73860:CDS
GAGGTGTTGTTTATGGTGGT+TGG 0.345051 4.2:+31013322 MS.gene73860:CDS
AATAAACCAGTTCTTACTTC+AGG 0.346458 4.2:+31013045 MS.gene73860:CDS
TTGCACTGCTAGTTCGGTTA+TGG 0.359471 4.2:+31012750 MS.gene73860:CDS
TCATCCTAGCATTCAATATC+TGG 0.366837 4.2:-31013470 None:intergenic
TCTCATCCAAAACAGAATTT+GGG 0.385389 4.2:-31013086 None:intergenic
TAAAGCTTGATAGATGAATC+AGG 0.386642 4.2:-31012856 None:intergenic
AGGTGTTGTTTATGGTGGTT+GGG 0.398981 4.2:+31013323 MS.gene73860:CDS
TCATTATTGCACTGCTAGTT+CGG 0.399032 4.2:+31012744 MS.gene73860:CDS
CCATCTATAACAAAACGTTT+AGG 0.402151 4.2:+31012709 MS.gene73860:CDS
AATATCTGGTCACCAACATT+TGG 0.402404 4.2:-31013456 None:intergenic
CTAGGTGAAGGAATGCTGTT+AGG 0.415948 4.2:-31012402 None:intergenic
TCAGCTGTTGTTTCTGCAAT+GGG 0.435265 4.2:-31012565 None:intergenic
AGGTTCCATGAGATCAAATT+CGG 0.435785 4.2:-31012821 None:intergenic
TTGAAGAAGCATTGCCAGAA+AGG 0.436652 4.2:+31013277 MS.gene73860:CDS
TTTAACCGAATTTGATCTCA+TGG 0.441041 4.2:+31012816 MS.gene73860:CDS
GATATTGAATGCTAGGATGA+TGG 0.442767 4.2:+31013473 MS.gene73860:CDS
ATGAAATTAGTAAGACAGTA+AGG 0.443024 4.2:+31013598 MS.gene73860:CDS
GATTGTGAGTGGAGATTGAA+TGG 0.446222 4.2:-31012496 None:intergenic
AACACCAGCTAGATATTCAA+TGG 0.456047 4.2:+31012786 MS.gene73860:CDS
ATGAATGAAGCTGATGCATT+AGG 0.462647 4.2:+31012964 MS.gene73860:CDS
AAGCTTCAAGAGATTGTTGA+AGG 0.463718 4.2:+31013696 MS.gene73860:CDS
TCAATTGTTTCGAATCCAAA+AGG 0.468326 4.2:-31013258 None:intergenic
TCGGAAAGGGTTGAAGGAAG+AGG 0.470087 4.2:+31013303 MS.gene73860:CDS
ATCACAGTTCCTCATGTTGA+AGG 0.480176 4.2:+31012535 MS.gene73860:CDS
ACTAGTCCTGAAGTAAGAAC+TGG 0.484585 4.2:-31013051 None:intergenic
TTTCCCATTGAATATCTAGC+TGG 0.489160 4.2:-31012790 None:intergenic
ATCAGCTGTTGTTTCTGCAA+TGG 0.495327 4.2:-31012566 None:intergenic
AATGTATCCATTGTTTGCCA+TGG 0.503454 4.2:+31012375 MS.gene73860:CDS
TGGATGAGAAGTGGGCTACA+TGG 0.504868 4.2:+31013100 MS.gene73860:CDS
CTAACTTGTTTGCTAGGTGA+AGG 0.506034 4.2:-31012414 None:intergenic
AGGTTCTTTATCAGAGGCAT+TGG 0.508110 4.2:+31013407 MS.gene73860:CDS
GTCATGATGTGTGGATGTAA+AGG 0.533183 4.2:-31012598 None:intergenic
ATGTGTGGATGTAAAGGGTA+AGG 0.533774 4.2:-31012592 None:intergenic
GAGAAGTGGGCTACATGGCT+TGG 0.536470 4.2:+31013105 MS.gene73860:CDS
ATATTGAATGCTAGGATGAT+GGG 0.538102 4.2:+31013474 MS.gene73860:CDS
GTGACCAGATATTGAATGCT+AGG 0.538541 4.2:+31013466 MS.gene73860:CDS
ATGTATCCATTGTTTGCCAT+GGG 0.542788 4.2:+31012376 MS.gene73860:CDS
ACTGCTAGTTCGGTTATGGT+TGG 0.542853 4.2:+31012754 MS.gene73860:CDS
ACACCAGCTAGATATTCAAT+GGG 0.545820 4.2:+31012787 MS.gene73860:CDS
TGGTTCAGGTTCTTTATCAG+AGG 0.546855 4.2:+31013401 MS.gene73860:CDS
AGAACATGCAGAGAGATTGA+AGG 0.551914 4.2:+31012991 MS.gene73860:CDS
GGATGTTTCATTACACATTG+TGG 0.554201 4.2:+31013381 MS.gene73860:CDS
AGGAACTGTGATTGTGATGA+AGG 0.556390 4.2:-31012524 None:intergenic
TCATGATGTGTGGATGTAAA+GGG 0.560316 4.2:-31012597 None:intergenic
GAAGTTGAGAAAGATGAAGA+TGG 0.563294 4.2:+31013519 MS.gene73860:CDS
GGAAGAGGTGTTGTTTATGG+TGG 0.567575 4.2:+31013318 MS.gene73860:CDS
ATGGGAAACAACTTGAAAGT+TGG 0.577450 4.2:+31013492 MS.gene73860:CDS
AAGTGGGCTACATGGCTTGG+TGG 0.583208 4.2:+31013108 MS.gene73860:CDS
TTATGTACGTAATCAAGATA+AGG 0.587959 4.2:-31013015 None:intergenic
TGAAATTAGTAAGACAGTAA+GGG 0.589536 4.2:+31013599 MS.gene73860:CDS
CTGTTGTTTCTGCAATGGGA+GGG 0.593897 4.2:-31012561 None:intergenic
GCTGTTGTTTCTGCAATGGG+AGG 0.596904 4.2:-31012562 None:intergenic
ATTGTTTCGAATCCAAAAGG+AGG 0.604163 4.2:-31013255 None:intergenic
GAACATGCAGAGAGATTGAA+GGG 0.608596 4.2:+31012992 MS.gene73860:CDS
TGTGATTGTGATGAAGGTGA+TGG 0.610393 4.2:-31012518 None:intergenic
TCCACACATCATGACAGCAA+TGG 0.616562 4.2:+31012606 MS.gene73860:CDS
TCCATTGCTGTCATGATGTG+TGG 0.617923 4.2:-31012607 None:intergenic
AAAGCTTGATAGATGAATCA+GGG 0.619210 4.2:-31012855 None:intergenic
AGGTGGCCCATGGCAAACAA+TGG 0.620046 4.2:-31012382 None:intergenic
GAATGCTGTTAGGTGGCCCA+TGG 0.620895 4.2:-31012392 None:intergenic
GATGAATCAGGGTAACCAGA+AGG 0.626995 4.2:-31012844 None:intergenic
TGAAGGTGATGGATTGTGAG+TGG 0.628540 4.2:-31012507 None:intergenic
GTAATGAAACATCCCACAGA+AGG 0.631699 4.2:-31013372 None:intergenic
TGTGTGGATGTAAAGGGTAA+GGG 0.640512 4.2:-31012591 None:intergenic
GGTGAAGGAATGCTGTTAGG+TGG 0.645956 4.2:-31012399 None:intergenic
GGAGGGAGACCTTCAACATG+AGG 0.665218 4.2:-31012544 None:intergenic
AAATCATAGAAAACAATGTG+AGG 0.666418 4.2:-31012673 None:intergenic
AAACAACTTGAAAGTTGGTG+TGG 0.672740 4.2:+31013497 MS.gene73860:CDS
GAATCAGGGTAACCAGAAGG+AGG 0.685270 4.2:-31012841 None:intergenic
GAGCATTGTGATGAATGATG+AGG 0.729336 4.2:+31013575 MS.gene73860:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATTCTTGAAATGTATT+TGG - chr4.2:31013189-31013208 None:intergenic 15.0%
!! ACATTTCAAGAATTAATTCT+TGG + chr4.2:31013192-31013211 MS.gene73860:CDS 20.0%
!!! TTTTCTATGATTTTACTCAT+TGG + chr4.2:31012683-31012702 MS.gene73860:CDS 20.0%
! AAATCATAGAAAACAATGTG+AGG - chr4.2:31012676-31012695 None:intergenic 25.0%
! ATGAAATTAGTAAGACAGTA+AGG + chr4.2:31013598-31013617 MS.gene73860:CDS 25.0%
! TGAAATTAGTAAGACAGTAA+GGG + chr4.2:31013599-31013618 MS.gene73860:CDS 25.0%
! TTATGTACGTAATCAAGATA+AGG - chr4.2:31013018-31013037 None:intergenic 25.0%
!!! GCTAAAAGGAAAGAATTTTT+TGG + chr4.2:31012904-31012923 MS.gene73860:CDS 25.0%
!!! TCAGTTGTTTATTGTTGTTT+TGG + chr4.2:31013144-31013163 MS.gene73860:CDS 25.0%
AAAGCTTGATAGATGAATCA+GGG - chr4.2:31012858-31012877 None:intergenic 30.0%
AATAAACCAGTTCTTACTTC+AGG + chr4.2:31013045-31013064 MS.gene73860:CDS 30.0%
ATATTGAATGCTAGGATGAT+GGG + chr4.2:31013474-31013493 MS.gene73860:CDS 30.0%
CCATCTATAACAAAACGTTT+AGG + chr4.2:31012709-31012728 MS.gene73860:CDS 30.0%
GCAAACAAGTTAGCAAAAAA+AGG + chr4.2:31012424-31012443 MS.gene73860:CDS 30.0%
TAAAGCTTGATAGATGAATC+AGG - chr4.2:31012859-31012878 None:intergenic 30.0%
TCAATTGTTTCGAATCCAAA+AGG - chr4.2:31013261-31013280 None:intergenic 30.0%
TCTCATCCAAAACAGAATTT+GGG - chr4.2:31013089-31013108 None:intergenic 30.0%
TTCTCATCCAAAACAGAATT+TGG - chr4.2:31013090-31013109 None:intergenic 30.0%
TTTAACCGAATTTGATCTCA+TGG + chr4.2:31012816-31012835 MS.gene73860:CDS 30.0%
! GCAATGTTCTTTTCTATGAT+CGG + chr4.2:31012929-31012948 MS.gene73860:CDS 30.0%
! TGAAAACCCAAATTCTGTTT+TGG + chr4.2:31013080-31013099 MS.gene73860:CDS 30.0%
! TTGGAAGTGAATGTGTTTTA+AGG + chr4.2:31013163-31013182 MS.gene73860:CDS 30.0%
!! AATTTGGATTGTGCTGATTT+AGG - chr4.2:31012472-31012491 None:intergenic 30.0%
!! CCTAAACGTTTTGTTATAGA+TGG - chr4.2:31012712-31012731 None:intergenic 30.0%
!! GAGATTGAATGGTTCTAATT+TGG - chr4.2:31012488-31012507 None:intergenic 30.0%
!!! TTAGTTTTGTTGCCAAATGT+TGG + chr4.2:31013444-31013463 MS.gene73860:CDS 30.0%
!!! TTTTTGCTAACTTGTTTGCT+AGG - chr4.2:31012423-31012442 None:intergenic 30.0%
AACACCAGCTAGATATTCAA+TGG + chr4.2:31012786-31012805 MS.gene73860:CDS 35.0%
AAGCTTCAAGAGATTGTTGA+AGG + chr4.2:31013696-31013715 MS.gene73860:CDS 35.0%
AATATCTGGTCACCAACATT+TGG - chr4.2:31013459-31013478 None:intergenic 35.0%
AATGTATCCATTGTTTGCCA+TGG + chr4.2:31012375-31012394 MS.gene73860:CDS 35.0%
ACACCAGCTAGATATTCAAT+GGG + chr4.2:31012787-31012806 MS.gene73860:CDS 35.0%
AGGTTCCATGAGATCAAATT+CGG - chr4.2:31012824-31012843 None:intergenic 35.0%
ATGAATGAAGCTGATGCATT+AGG + chr4.2:31012964-31012983 MS.gene73860:CDS 35.0%
ATGGGAAACAACTTGAAAGT+TGG + chr4.2:31013492-31013511 MS.gene73860:CDS 35.0%
ATGTATCCATTGTTTGCCAT+GGG + chr4.2:31012376-31012395 MS.gene73860:CDS 35.0%
ATTGTTTCGAATCCAAAAGG+AGG - chr4.2:31013258-31013277 None:intergenic 35.0%
GAAGTTGAGAAAGATGAAGA+TGG + chr4.2:31013519-31013538 MS.gene73860:CDS 35.0%
GATATTGAATGCTAGGATGA+TGG + chr4.2:31013473-31013492 MS.gene73860:CDS 35.0%
GGATGTTTCATTACACATTG+TGG + chr4.2:31013381-31013400 MS.gene73860:CDS 35.0%
TCATCCTAGCATTCAATATC+TGG - chr4.2:31013473-31013492 None:intergenic 35.0%
TCATGATGTGTGGATGTAAA+GGG - chr4.2:31012600-31012619 None:intergenic 35.0%
TCATTATTGCACTGCTAGTT+CGG + chr4.2:31012744-31012763 MS.gene73860:CDS 35.0%
TTCATTACACATTGTGGTTC+AGG + chr4.2:31013387-31013406 MS.gene73860:CDS 35.0%
TTTCCCATTGAATATCTAGC+TGG - chr4.2:31012793-31012812 None:intergenic 35.0%
! GTGTGAAGAATGTGATTTTG+TGG - chr4.2:31012450-31012469 None:intergenic 35.0%
!! AAACAACTTGAAAGTTGGTG+TGG + chr4.2:31013497-31013516 MS.gene73860:CDS 35.0%
!! ATTCTGTTTTGGATGAGAAG+TGG + chr4.2:31013091-31013110 MS.gene73860:CDS 35.0%
!! ATTCTTGGTCTTGAGTTAAC+TGG + chr4.2:31013207-31013226 MS.gene73860:CDS 35.0%
!! GGTTCAGCAACAATTGATTT+TGG + chr4.2:31013344-31013363 MS.gene73860:CDS 35.0%
!! TTCTGTTTTGGATGAGAAGT+GGG + chr4.2:31013092-31013111 MS.gene73860:CDS 35.0%
!! TTCTTTCCTTTTAGCTGCAA+AGG - chr4.2:31012899-31012918 None:intergenic 35.0%
!!! ATTTTGGAACATCCTTCTGT+GGG + chr4.2:31013360-31013379 MS.gene73860:CDS 35.0%
ACTAGTCCTGAAGTAAGAAC+TGG - chr4.2:31013054-31013073 None:intergenic 40.0%
AGAACATGCAGAGAGATTGA+AGG + chr4.2:31012991-31013010 MS.gene73860:CDS 40.0%
AGGAACTGTGATTGTGATGA+AGG - chr4.2:31012527-31012546 None:intergenic 40.0%
ATCACAGTTCCTCATGTTGA+AGG + chr4.2:31012535-31012554 MS.gene73860:CDS 40.0%
ATGTGTGGATGTAAAGGGTA+AGG - chr4.2:31012595-31012614 None:intergenic 40.0%
CTAAAGCCTTTGCAGCTAAA+AGG + chr4.2:31012890-31012909 MS.gene73860:CDS 40.0%
GAACATGCAGAGAGATTGAA+GGG + chr4.2:31012992-31013011 MS.gene73860:CDS 40.0%
GATTGTGAGTGGAGATTGAA+TGG - chr4.2:31012499-31012518 None:intergenic 40.0%
GTAATGAAACATCCCACAGA+AGG - chr4.2:31013375-31013394 None:intergenic 40.0%
GTCATGATGTGTGGATGTAA+AGG - chr4.2:31012601-31012620 None:intergenic 40.0%
GTGACCAGATATTGAATGCT+AGG + chr4.2:31013466-31013485 MS.gene73860:CDS 40.0%
TGTGATTGTGATGAAGGTGA+TGG - chr4.2:31012521-31012540 None:intergenic 40.0%
TGTGTGGATGTAAAGGGTAA+GGG - chr4.2:31012594-31012613 None:intergenic 40.0%
! AGCATTGCCAGAAAGGTTTT+CGG + chr4.2:31013284-31013303 MS.gene73860:CDS 40.0%
! AGGTTCTTTATCAGAGGCAT+TGG + chr4.2:31013407-31013426 MS.gene73860:CDS 40.0%
! GAGCATTGTGATGAATGATG+AGG + chr4.2:31013575-31013594 MS.gene73860:CDS 40.0%
! TGGTTCAGGTTCTTTATCAG+AGG + chr4.2:31013401-31013420 MS.gene73860:CDS 40.0%
!! AGGTGTTGTTTATGGTGGTT+GGG + chr4.2:31013323-31013342 MS.gene73860:CDS 40.0%
!! ATCAGCTGTTGTTTCTGCAA+TGG - chr4.2:31012569-31012588 None:intergenic 40.0%
!! CTAACTTGTTTGCTAGGTGA+AGG - chr4.2:31012417-31012436 None:intergenic 40.0%
!! GAAGGAAGAGGTGTTGTTTA+TGG + chr4.2:31013315-31013334 MS.gene73860:CDS 40.0%
!! TCAGCTGTTGTTTCTGCAAT+GGG - chr4.2:31012568-31012587 None:intergenic 40.0%
!! TTGAAGAAGCATTGCCAGAA+AGG + chr4.2:31013277-31013296 MS.gene73860:CDS 40.0%
!!! GATTTTGGAACATCCTTCTG+TGG + chr4.2:31013359-31013378 MS.gene73860:CDS 40.0%
ACCCTTTCCGAAAACCTTTC+TGG - chr4.2:31013294-31013313 None:intergenic 45.0%
ACTGCTAGTTCGGTTATGGT+TGG + chr4.2:31012754-31012773 MS.gene73860:CDS 45.0%
CTAGGTGAAGGAATGCTGTT+AGG - chr4.2:31012405-31012424 None:intergenic 45.0%
GATGAATCAGGGTAACCAGA+AGG - chr4.2:31012847-31012866 None:intergenic 45.0%
TCCACACATCATGACAGCAA+TGG + chr4.2:31012606-31012625 MS.gene73860:CDS 45.0%
TCCATTGCTGTCATGATGTG+TGG - chr4.2:31012610-31012629 None:intergenic 45.0%
TTGCACTGCTAGTTCGGTTA+TGG + chr4.2:31012750-31012769 MS.gene73860:CDS 45.0%
! AGGTTTTCGGAAAGGGTTGA+AGG + chr4.2:31013297-31013316 MS.gene73860:CDS 45.0%
! GCCAGAAAGGTTTTCGGAAA+GGG + chr4.2:31013290-31013309 MS.gene73860:CDS 45.0%
! TGCCAGAAAGGTTTTCGGAA+AGG + chr4.2:31013289-31013308 MS.gene73860:CDS 45.0%
!! CTGTTGTTTCTGCAATGGGA+GGG - chr4.2:31012564-31012583 None:intergenic 45.0%
!! GAGGTGTTGTTTATGGTGGT+TGG + chr4.2:31013322-31013341 MS.gene73860:CDS 45.0%
!! GGAAGAGGTGTTGTTTATGG+TGG + chr4.2:31013318-31013337 MS.gene73860:CDS 45.0%
!! TGAAGGTGATGGATTGTGAG+TGG - chr4.2:31012510-31012529 None:intergenic 45.0%
!!! GCAGCTTTGAAACCTCCTTT+TGG + chr4.2:31013243-31013262 MS.gene73860:CDS 45.0%
GAATCAGGGTAACCAGAAGG+AGG - chr4.2:31012844-31012863 None:intergenic 50.0%
GATCTCATGGAACCTCCTTC+TGG + chr4.2:31012829-31012848 MS.gene73860:CDS 50.0%
GGTGAAGGAATGCTGTTAGG+TGG - chr4.2:31012402-31012421 None:intergenic 50.0%
TCGGAAAGGGTTGAAGGAAG+AGG + chr4.2:31013303-31013322 MS.gene73860:CDS 50.0%
!! GCTGTTGTTTCTGCAATGGG+AGG - chr4.2:31012565-31012584 None:intergenic 50.0%
!! TGGATGAGAAGTGGGCTACA+TGG + chr4.2:31013100-31013119 MS.gene73860:CDS 50.0%
AGGTGGCCCATGGCAAACAA+TGG - chr4.2:31012385-31012404 None:intergenic 55.0%
GAATGCTGTTAGGTGGCCCA+TGG - chr4.2:31012395-31012414 None:intergenic 55.0%
GGAGGGAGACCTTCAACATG+AGG - chr4.2:31012547-31012566 None:intergenic 55.0%
!! AAGTGGGCTACATGGCTTGG+TGG + chr4.2:31013108-31013127 MS.gene73860:CDS 55.0%
!! GAGAAGTGGGCTACATGGCT+TGG + chr4.2:31013105-31013124 MS.gene73860:CDS 55.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 31012346 31013728 31012346 ID=MS.gene73860
chr4.2 mRNA 31012346 31013728 31012346 ID=MS.gene73860.t1;Parent=MS.gene73860
chr4.2 exon 31012346 31013728 31012346 ID=MS.gene73860.t1.exon1;Parent=MS.gene73860.t1
chr4.2 CDS 31012346 31013728 31012346 ID=cds.MS.gene73860.t1;Parent=MS.gene73860.t1
Gene Sequence

>MS.gene73860

ATGGATTCATTATCATCTTTACACATAGCAATGTATCCATTGTTTGCCATGGGCCACCTAACAGCATTCCTTCACCTAGCAAACAAGTTAGCAAAAAAAGGCCACAAAATCACATTCTTCACACCTAAATCAGCACAATCCAAATTAGAACCATTCAATCTCCACTCACAATCCATCACCTTCATCACAATCACAGTTCCTCATGTTGAAGGTCTCCCTCCCATTGCAGAAACAACAGCTGATGTCCCTTACCCTTTACATCCACACATCATGACAGCAATGGACTTAACTCAACATGATATTGAAACTCATCTCTCGAATCTCAAACCTCACATTGTTTTCTATGATTTTACTCATTGGCTTCCATCTATAACAAAACGTTTAGGTATCAAAGCTCTTCATTATTGCACTGCTAGTTCGGTTATGGTTGGTTACACTCTAACACCAGCTAGATATTCAATGGGAAAAGATTTAACCGAATTTGATCTCATGGAACCTCCTTCTGGTTACCCTGATTCATCTATCAAGCTTTATAATCATGAAGCTAAAGCCTTTGCAGCTAAAAGGAAAGAATTTTTTGGTAGCAATGTTCTTTTCTATGATCGGCAAGCGCTTGCTATGAATGAAGCTGATGCATTAGGATACAGAACATGCAGAGAGATTGAAGGGCCTTATCTTGATTACGTACATAAACAGTTTAATAAACCAGTTCTTACTTCAGGACTAGTTATACTTGAAAACCCAAATTCTGTTTTGGATGAGAAGTGGGCTACATGGCTTGGTGGATTCAAAACAAATTCAGTTGTTTATTGTTGTTTTGGAAGTGAATGTGTTTTAAGGCCAAATACATTTCAAGAATTAATTCTTGGTCTTGAGTTAACTGGTATGACATTTTTTGCAGCTTTGAAACCTCCTTTTGGATTCGAAACAATTGAAGAAGCATTGCCAGAAAGGTTTTCGGAAAGGGTTGAAGGAAGAGGTGTTGTTTATGGTGGTTGGGTTCAGCAACAATTGATTTTGGAACATCCTTCTGTGGGATGTTTCATTACACATTGTGGTTCAGGTTCTTTATCAGAGGCATTGGTGAATAAATGTCAATTAGTTTTGTTGCCAAATGTTGGTGACCAGATATTGAATGCTAGGATGATGGGAAACAACTTGAAAGTTGGTGTGGAAGTTGAGAAAGATGAAGATGGATTCTATACTAAGAATAATGTTTGTAAAGCTGTGAGCATTGTGATGAATGATGAGGATGAAATTAGTAAGACAGTAAGGGCTAATCATGCTAAGATTAGAGAGATGTTGCTTAATAAACATCTTGAGTCATCTTATATTGATGACTTCTGCAAGAAGCTTCAAGAGATTGTTGAAGGAAAGAAATGA

Protein sequence

>MS.gene73860.t1

MDSLSSLHIAMYPLFAMGHLTAFLHLANKLAKKGHKITFFTPKSAQSKLEPFNLHSQSITFITITVPHVEGLPPIAETTADVPYPLHPHIMTAMDLTQHDIETHLSNLKPHIVFYDFTHWLPSITKRLGIKALHYCTASSVMVGYTLTPARYSMGKDLTEFDLMEPPSGYPDSSIKLYNHEAKAFAAKRKEFFGSNVLFYDRQALAMNEADALGYRTCREIEGPYLDYVHKQFNKPVLTSGLVILENPNSVLDEKWATWLGGFKTNSVVYCCFGSECVLRPNTFQELILGLELTGMTFFAALKPPFGFETIEEALPERFSERVEGRGVVYGGWVQQQLILEHPSVGCFITHCGSGSLSEALVNKCQLVLLPNVGDQILNARMMGNNLKVGVEVEKDEDGFYTKNNVCKAVSIVMNDEDEISKTVRANHAKIREMLLNKHLESSYIDDFCKKLQEIVEGKK