AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene69835


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69835.t1 MTR_2g083420 88.210 458 30 1 1 458 1 434 0.0 832
MS.gene69835.t1 MTR_2g083390 87.336 458 34 1 1 458 1 434 0.0 828
MS.gene69835.t1 MTR_2g083480 84.716 458 70 0 1 458 1 458 0.0 793
MS.gene69835.t1 MTR_2g083430 79.039 458 96 0 1 458 1 458 0.0 731
MS.gene69835.t1 MTR_2g083380 67.031 458 151 0 1 458 18 475 0.0 624
MS.gene69835.t1 MTR_2g083490 66.594 458 153 0 1 458 1 458 0.0 622
MS.gene69835.t1 MTR_2g083360 68.212 453 39 4 6 458 27 374 0.0 589
MS.gene69835.t1 MTR_4g079250 61.087 460 175 3 1 458 1 458 0.0 582
MS.gene69835.t1 MTR_4g079270 60.000 460 180 3 1 458 1 458 0.0 572
MS.gene69835.t1 MTR_2g014900 58.628 452 186 1 7 458 6 456 0.0 548
MS.gene69835.t1 MTR_1g090270 42.241 464 242 13 7 457 14 464 4.10e-115 346
MS.gene69835.t1 MTR_2g086283 58.103 253 54 2 205 457 135 335 3.42e-93 285
MS.gene69835.t1 MTR_2g086283 62.774 137 50 1 11 147 1 136 2.10e-50 174
MS.gene69835.t1 MTR_4g059370 40.854 328 173 8 141 457 74 391 9.49e-79 250
MS.gene69835.t1 MTR_8g068330 31.635 471 302 13 1 458 1 464 4.97e-68 224
MS.gene69835.t1 MTR_8g068360 32.272 471 296 14 2 458 6 467 4.87e-65 217
MS.gene69835.t1 MTR_7g067330 30.687 466 267 14 2 454 3 425 1.38e-63 212
MS.gene69835.t1 MTR_8g068340 30.490 469 300 11 2 454 6 464 3.36e-63 212
MS.gene69835.t1 MTR_2g014930 41.869 289 88 5 17 305 9 217 1.19e-62 203
MS.gene69835.t1 MTR_7g067120 30.519 462 267 14 2 451 3 422 8.04e-62 207
MS.gene69835.t1 MTR_2g008226 32.623 469 286 15 6 454 8 466 6.70e-61 206
MS.gene69835.t1 MTR_4g123553 31.385 462 287 15 6 454 13 457 7.65e-60 203
MS.gene69835.t1 MTR_2g008225 30.258 466 302 12 2 455 9 463 9.36e-60 203
MS.gene69835.t1 MTR_2g008220 30.538 465 302 12 2 455 8 462 1.02e-59 202
MS.gene69835.t1 MTR_6g036650 30.720 472 294 15 1 454 11 467 3.65e-57 196
MS.gene69835.t1 MTR_6g042310 30.538 465 285 16 7 454 17 460 1.39e-54 189
MS.gene69835.t1 MTR_2g046620 30.217 460 295 13 6 454 14 458 2.52e-53 186
MS.gene69835.t1 MTR_4g079280 41.667 228 88 3 11 238 1 183 1.77e-52 175
MS.gene69835.t1 MTR_2g083440 75.490 102 25 0 357 458 11 112 4.64e-51 169
MS.gene69835.t1 MTR_8g007565 30.769 442 274 13 7 428 6 435 2.04e-47 170
MS.gene69835.t1 MTR_8g007650 30.995 442 273 13 7 428 6 435 2.21e-47 170
MS.gene69835.t1 MTR_1g090280 47.090 189 88 5 261 438 108 295 1.55e-46 164
MS.gene69835.t1 MTR_4g077960 28.982 452 289 15 17 454 1 434 2.04e-46 167
MS.gene69835.t1 MTR_5g066410 29.224 438 261 11 11 427 1 410 6.08e-43 157
MS.gene69835.t1 MTR_8g066610 27.837 467 287 17 1 433 1 451 1.05e-34 135
MS.gene69835.t1 MTR_8g071070 27.443 481 308 16 5 457 4 471 1.88e-34 134
MS.gene69835.t1 MTR_6g023665 27.416 445 283 13 9 427 14 444 1.27e-32 129
MS.gene69835.t1 MTR_8g009050 28.298 470 263 16 7 434 5 442 5.35e-32 127
MS.gene69835.t1 MTR_8g009055 28.632 468 264 16 7 434 5 442 1.38e-31 126
MS.gene69835.t1 MTR_6g488280 30.128 468 241 19 9 427 7 437 1.20e-30 124
MS.gene69835.t1 MTR_0428s0010 30.128 468 241 19 9 427 7 437 1.20e-30 124
MS.gene69835.t1 MTR_5g087620 26.623 462 284 20 8 427 10 458 2.46e-30 123
MS.gene69835.t1 MTR_4g485590 28.362 409 235 14 8 394 9 381 1.47e-29 119
MS.gene69835.t1 MTR_8g465670 26.316 456 267 16 9 424 8 434 2.02e-29 120
MS.gene69835.t1 MTR_2g098430 24.043 470 292 16 9 437 7 452 7.20e-29 119
MS.gene69835.t1 MTR_8g027870 29.621 449 256 16 6 421 16 437 1.08e-28 118
MS.gene69835.t1 MTR_0009s0240 26.555 418 263 14 5 397 4 402 1.29e-28 118
MS.gene69835.t1 MTR_1g062380 26.078 464 292 19 5 428 13 465 1.84e-28 117
MS.gene69835.t1 MTR_7g070660 25.275 455 294 15 7 428 10 451 1.85e-28 117
MS.gene69835.t1 MTR_8g027885 29.318 440 269 17 6 421 16 437 1.87e-28 117
MS.gene69835.t1 MTR_4g031800 26.709 468 278 19 6 434 7 448 2.71e-28 117
MS.gene69835.t1 MTR_7g013220 25.855 468 280 20 8 444 5 436 3.03e-28 116
MS.gene69835.t1 MTR_6g033615 27.152 453 272 16 9 434 5 426 4.16e-28 116
MS.gene69835.t1 MTR_3g435310 36.788 193 115 4 258 450 227 412 5.02e-28 115
MS.gene69835.t1 MTR_3g435310 31.429 140 88 5 6 139 16 153 2.36e-14 75.1
MS.gene69835.t1 MTR_8g006270 29.710 276 164 7 167 428 178 437 1.29e-27 115
MS.gene69835.t1 MTR_5g045970 26.709 468 288 18 5 432 13 465 1.99e-27 115
MS.gene69835.t1 MTR_8g006220 26.190 462 268 15 9 424 7 441 4.42e-27 114
MS.gene69835.t1 MTR_8g006710 26.882 465 261 17 9 427 7 438 6.69e-27 113
MS.gene69835.t1 MTR_8g008990 27.922 462 277 18 7 434 5 444 8.39e-27 112
MS.gene69835.t1 MTR_0184s0030 36.058 208 110 6 237 425 234 437 8.79e-27 112
MS.gene69835.t1 MTR_3g009510 32.719 217 127 4 236 436 241 454 1.12e-26 112
MS.gene69835.t1 MTR_7g070740 24.675 462 300 14 7 433 10 458 1.30e-26 112
MS.gene69835.t1 MTR_0184s0040 26.501 483 297 18 7 457 20 476 2.48e-26 111
MS.gene69835.t1 MTR_0078s0190 26.501 483 297 18 7 457 20 476 2.48e-26 111
MS.gene69835.t1 MTR_6g033625 26.623 462 277 17 9 434 5 440 2.84e-26 111
MS.gene69835.t1 MTR_8g006730 26.829 451 282 15 8 427 6 439 2.89e-26 111
MS.gene69835.t1 MTR_7g117170 36.842 190 104 5 257 434 266 451 4.79e-26 110
MS.gene69835.t1 MTR_7g070610 24.197 467 297 14 7 433 12 461 5.60e-26 110
MS.gene69835.t1 MTR_6g038220 25.000 456 288 17 8 440 11 435 6.01e-26 110
MS.gene69835.t1 MTR_8g009073 27.948 458 278 19 7 434 5 440 1.07e-25 109
MS.gene69835.t1 MTR_7g013200 25.991 454 277 16 8 437 5 423 1.17e-25 108
MS.gene69835.t1 MTR_2g046820 35.096 208 123 4 257 454 257 462 1.60e-25 108
MS.gene69835.t1 MTR_7g013180 26.622 447 255 18 8 419 5 413 2.58e-25 108
MS.gene69835.t1 MTR_7g055710 24.839 467 293 15 7 433 10 458 3.24e-25 108
MS.gene69835.t1 MTR_0078s0060 25.054 467 284 15 7 436 5 442 3.52e-25 108
MS.gene69835.t1 MTR_8g009063 26.539 471 271 17 7 436 12 448 4.66e-25 107
MS.gene69835.t1 MTR_8g012635 30.605 281 158 9 166 427 182 444 5.80e-25 107
MS.gene69835.t1 MTR_4g485620 26.018 442 285 14 20 433 1 428 6.00e-25 107
MS.gene69835.t1 MTR_7g046490 35.938 192 109 4 253 432 250 439 7.46e-25 107
MS.gene69835.t1 MTR_7g070810 25.734 443 290 13 7 421 8 439 1.37e-24 106
MS.gene69835.t1 MTR_6g038200 24.779 452 287 18 8 436 11 432 1.46e-24 106
MS.gene69835.t1 MTR_1g019520 36.782 174 97 3 257 419 4 175 1.64e-24 101
MS.gene69835.t1 MTR_6g038230 26.059 472 264 20 8 440 11 436 1.70e-24 105
MS.gene69835.t1 MTR_6g005600 36.269 193 106 4 255 434 255 443 3.14e-24 105
MS.gene69835.t1 MTR_4g485630 24.615 455 304 14 7 433 8 451 6.14e-24 104
MS.gene69835.t1 MTR_8g012650 32.110 218 127 5 235 435 235 448 6.78e-24 104
MS.gene69835.t1 MTR_0078s0010 35.676 185 107 4 253 427 254 436 8.72e-24 103
MS.gene69835.t1 MTR_6g033725 31.646 237 140 7 216 434 205 437 1.41e-23 103
MS.gene69835.t1 MTR_2g040530 33.654 208 126 4 257 454 259 464 1.42e-23 103
MS.gene69835.t1 MTR_8g012730 32.870 216 126 5 228 427 69 281 1.66e-23 100
MS.gene69835.t1 MTR_5g035560 24.583 480 296 19 7 456 10 453 2.31e-23 102
MS.gene69835.t1 MTR_4g117980 24.561 456 285 16 6 421 9 445 2.37e-23 102
MS.gene69835.t1 MTR_8g466240 26.256 438 244 19 1 398 1 399 2.51e-23 102
MS.gene69835.t1 MTR_8g006260 29.259 270 161 10 184 435 198 455 2.86e-23 102
MS.gene69835.t1 MTR_7g117405 27.292 469 273 19 8 433 12 455 2.88e-23 102
MS.gene69835.t1 MTR_2g046750 34.615 208 124 4 257 454 260 465 2.95e-23 102
MS.gene69835.t1 MTR_4g024020 25.221 452 293 16 7 421 8 451 3.20e-23 102
MS.gene69835.t1 MTR_8g009073 33.953 215 124 7 234 434 101 311 3.25e-23 100
MS.gene69835.t1 MTR_1g019510 36.782 174 97 3 257 419 255 426 4.53e-23 102
MS.gene69835.t1 MTR_8g009067 35.106 188 108 5 257 434 139 322 5.62e-23 100
MS.gene69835.t1 MTR_5g035580 25.771 454 275 16 7 434 12 429 6.97e-23 101
MS.gene69835.t1 MTR_7g013240 26.464 461 266 22 8 440 6 421 7.95e-23 100
MS.gene69835.t1 MTR_8g009067 35.106 188 108 5 257 434 257 440 8.96e-23 100
MS.gene69835.t1 MTR_5g098930 23.577 492 296 16 7 450 4 463 1.18e-22 100
MS.gene69835.t1 MTR_7g102460 25.219 456 285 18 7 421 8 448 1.22e-22 100
MS.gene69835.t1 MTR_8g074550 22.764 492 294 19 1 434 1 464 1.37e-22 100
MS.gene69835.t1 MTR_7g070910 23.241 469 299 16 7 433 10 459 1.81e-22 100
MS.gene69835.t1 MTR_6g038240 32.418 182 112 6 254 435 261 431 2.41e-22 99.8
MS.gene69835.t1 MTR_8g012630 34.225 187 105 5 257 427 204 388 3.19e-22 99.0
MS.gene69835.t1 MTR_7g047030 34.375 192 112 5 253 434 254 441 8.17e-22 98.2
MS.gene69835.t1 MTR_7g047270 34.375 192 112 5 253 434 254 441 8.17e-22 98.2
MS.gene69835.t1 MTR_5g045960 25.887 479 295 19 7 443 8 468 8.56e-22 98.2
MS.gene69835.t1 MTR_8g044140 25.389 386 240 12 64 416 37 407 1.32e-21 97.4
MS.gene69835.t1 MTR_7g070780 23.922 464 305 13 5 433 8 458 1.39e-21 97.8
MS.gene69835.t1 MTR_7g071040 22.930 471 302 16 5 433 14 465 1.40e-21 97.8
MS.gene69835.t1 MTR_4g117950 24.667 450 278 16 6 421 4 426 1.43e-21 97.4
MS.gene69835.t1 MTR_5g090610 27.626 257 160 6 206 438 190 444 1.62e-21 97.1
MS.gene69835.t1 MTR_7g013260 25.221 452 284 19 8 440 6 422 1.97e-21 96.7
MS.gene69835.t1 MTR_7g102560 24.224 483 297 17 1 436 1 461 2.11e-21 97.1
MS.gene69835.t1 MTR_5g019580 29.259 270 160 7 183 433 198 455 2.36e-21 97.1
MS.gene69835.t1 MTR_1g107350 24.411 467 297 19 1 434 1 444 2.39e-21 96.7
MS.gene69835.t1 MTR_5g019580 29.259 270 160 7 183 433 222 479 2.56e-21 97.1
MS.gene69835.t1 MTR_7g102490 25.828 453 288 18 7 421 8 450 3.00e-21 96.7
MS.gene69835.t1 MTR_7g070800 22.609 460 313 12 5 433 3 450 4.49e-21 95.9
MS.gene69835.t1 MTR_7g102550 25.000 464 295 18 8 432 9 458 4.85e-21 95.9
MS.gene69835.t1 MTR_3g069690 28.571 238 152 6 207 434 196 425 5.64e-21 95.5
MS.gene69835.t1 MTR_6g033675 29.508 244 156 7 203 434 201 440 7.05e-21 95.5
MS.gene69835.t1 MTR_8g077590 28.881 277 169 6 166 432 184 442 8.45e-21 95.1
MS.gene69835.t1 MTR_4g082820 25.814 430 278 13 7 406 6 424 1.06e-20 94.7
MS.gene69835.t1 MTR_5g090700 28.077 260 155 8 206 438 206 460 1.26e-20 94.7
MS.gene69835.t1 MTR_0536s0010 25.108 462 260 20 6 421 19 440 1.26e-20 94.7
MS.gene69835.t1 MTR_6g033660 32.653 196 125 5 241 434 249 439 1.66e-20 94.4
MS.gene69835.t1 MTR_8g008970 33.511 188 111 4 257 434 257 440 3.16e-20 94.4
MS.gene69835.t1 MTR_8g008970 25.348 359 225 11 87 436 439 763 8.73e-17 83.6
MS.gene69835.t1 MTR_4g128720 24.893 466 293 17 7 444 14 450 3.34e-20 93.2
MS.gene69835.t1 MTR_8g012745 29.391 279 161 11 166 427 182 441 3.45e-20 93.2
MS.gene69835.t1 MTR_7g070940 24.222 450 308 14 7 433 8 447 3.66e-20 93.2
MS.gene69835.t1 MTR_7g102450 25.652 460 272 18 8 427 11 440 3.74e-20 93.2
MS.gene69835.t1 MTR_8g088560 33.155 187 117 6 252 438 259 437 5.95e-20 92.4
MS.gene69835.t1 MTR_3g009490 33.533 167 95 4 283 436 3 166 5.96e-20 87.8
MS.gene69835.t1 MTR_7g102520 25.624 441 278 15 7 413 11 435 6.79e-20 92.4
MS.gene69835.t1 MTR_8g083280 29.741 232 129 8 241 449 249 469 6.88e-20 92.4
MS.gene69835.t1 MTR_3g084540 29.843 191 122 4 253 436 266 451 7.94e-20 92.0
MS.gene69835.t1 MTR_3g049970 24.783 460 300 16 3 434 4 445 8.13e-20 92.0
MS.gene69835.t1 MTR_2g059240 23.747 459 301 11 2 431 8 446 9.64e-20 92.0
MS.gene69835.t1 MTR_7g070930 22.756 479 307 16 1 433 1 462 9.66e-20 92.0
MS.gene69835.t1 MTR_4g128690 32.547 212 129 6 210 419 216 415 1.03e-19 91.7
MS.gene69835.t1 MTR_7g080940 23.060 451 300 16 5 436 8 430 1.09e-19 91.7
MS.gene69835.t1 MTR_5g098960 33.663 202 115 8 257 454 260 446 1.11e-19 91.7
MS.gene69835.t1 MTR_3g079480 24.353 464 280 20 8 427 21 457 1.36e-19 91.7
MS.gene69835.t1 MTR_5g067170 32.275 189 111 5 253 425 262 449 1.48e-19 91.3
MS.gene69835.t1 MTR_5g090660 28.761 226 138 7 234 438 233 456 1.55e-19 91.7
MS.gene69835.t1 MTR_4g485640 29.185 233 140 8 220 428 409 640 2.00e-19 91.7
MS.gene69835.t1 MTR_8g083290 32.961 179 113 5 257 434 267 439 2.12e-19 90.9
MS.gene69835.t1 MTR_3g084530 30.366 191 120 5 253 436 266 450 2.28e-19 90.9
MS.gene69835.t1 MTR_7g080950 33.511 188 113 7 253 440 253 428 2.40e-19 90.5
MS.gene69835.t1 MTR_4g082810 26.905 420 261 15 7 397 6 408 2.59e-19 90.1
MS.gene69835.t1 MTR_5g090620 27.049 244 147 6 224 438 218 459 3.58e-19 90.1
MS.gene69835.t1 MTR_3g084520 27.854 219 129 6 241 436 238 450 4.85e-19 89.7
MS.gene69835.t1 MTR_2g034990 22.857 455 304 15 1 421 4 445 5.92e-19 89.7
MS.gene69835.t1 MTR_6g038300 30.601 183 117 5 254 436 261 433 6.47e-19 89.4
MS.gene69835.t1 MTR_1g107315 32.692 208 122 8 219 412 221 424 8.32e-19 89.0
MS.gene69835.t1 MTR_7g080935 23.725 451 293 17 7 436 10 430 1.00e-18 89.0
MS.gene69835.t1 MTR_5g027210 25.092 271 166 6 212 450 212 477 1.15e-18 88.6
MS.gene69835.t1 MTR_0536s0020 24.440 491 293 20 7 448 17 478 1.26e-18 88.6
MS.gene69835.t1 MTR_4g117960 23.110 463 290 17 1 421 6 444 1.60e-18 88.2
MS.gene69835.t1 MTR_5g090630 28.767 219 133 6 241 438 233 449 1.62e-18 88.2
MS.gene69835.t1 MTR_7g071050 23.241 469 290 17 7 455 12 430 1.77e-18 87.8
MS.gene69835.t1 MTR_3g069710 29.344 259 168 9 208 457 202 454 3.46e-18 87.0
MS.gene69835.t1 MTR_5g090670 27.602 221 135 6 241 438 242 460 3.91e-18 87.0
MS.gene69835.t1 MTR_2g035020 23.632 457 298 18 1 421 4 445 4.09e-18 87.0
MS.gene69835.t1 MTR_4g108250 22.414 464 310 12 7 432 10 461 4.38e-18 87.0
MS.gene69835.t1 MTR_6g013900 25.723 346 218 13 107 427 116 447 4.45e-18 87.0
MS.gene69835.t1 MTR_5g090580 25.769 260 161 7 206 438 204 458 6.39e-18 86.3
MS.gene69835.t1 MTR_4g008630 26.378 254 169 7 199 437 191 441 6.59e-18 86.3
MS.gene69835.t1 MTR_6g011340 22.897 428 288 14 8 401 10 429 8.57e-18 85.9
MS.gene69835.t1 MTR_8g032950 23.144 458 298 17 6 427 10 449 9.85e-18 85.9
MS.gene69835.t1 MTR_1g107360 30.882 204 129 5 232 434 245 437 9.98e-18 85.9
MS.gene69835.t1 MTR_2g035040 30.412 194 116 5 257 436 173 361 1.07e-17 85.1
MS.gene69835.t1 MTR_3g479520 23.431 478 288 20 1 427 1 451 1.12e-17 85.9
MS.gene69835.t1 MTR_0288s0020 25.240 416 262 16 8 395 10 404 1.19e-17 85.5
MS.gene69835.t1 MTR_4g094920 27.885 208 141 6 253 454 275 479 1.96e-17 85.1
MS.gene69835.t1 MTR_6g013960 24.171 422 278 15 8 395 10 423 2.25e-17 84.7
MS.gene69835.t1 MTR_5g040030 25.490 255 162 7 198 428 207 457 2.29e-17 84.7
MS.gene69835.t1 MTR_5g029800 30.769 182 111 4 250 417 257 437 2.40e-17 84.7
MS.gene69835.t1 MTR_6g035265 28.141 199 124 5 254 434 256 453 3.01e-17 84.3
MS.gene69835.t1 MTR_1g032490 25.057 439 285 18 2 412 4 426 3.02e-17 84.3
MS.gene69835.t1 MTR_7g012120 29.897 194 120 5 250 428 263 455 3.45e-17 84.3
MS.gene69835.t1 MTR_5g016660 21.856 485 287 18 2 427 3 454 3.56e-17 84.3
MS.gene69835.t1 MTR_7g070870 23.415 410 280 12 4 394 15 409 3.64e-17 84.0
MS.gene69835.t1 MTR_4g095008 29.586 169 112 5 253 417 260 425 3.64e-17 84.3
MS.gene69835.t1 MTR_8g090095 27.642 246 160 7 208 438 217 459 3.69e-17 84.0
MS.gene69835.t1 MTR_5g070040 28.727 275 167 12 166 427 184 442 3.81e-17 84.0
MS.gene69835.t1 MTR_1g029540 21.700 447 301 13 13 437 19 438 3.91e-17 84.0
MS.gene69835.t1 MTR_7g070860 22.101 457 301 12 7 433 6 437 4.22e-17 84.0
MS.gene69835.t1 MTR_6g035185 22.151 465 307 15 1 427 4 451 5.47e-17 83.6
MS.gene69835.t1 MTR_8g064880 23.516 455 272 19 5 412 6 431 5.49e-17 83.6
MS.gene69835.t1 MTR_7g011470 22.796 465 312 11 8 446 10 453 6.31e-17 83.2
MS.gene69835.t1 MTR_6g035295 20.479 459 311 12 7 427 11 453 7.47e-17 83.2
MS.gene69835.t1 MTR_7g470610 28.205 312 171 12 120 409 5 285 8.40e-17 81.3
MS.gene69835.t1 MTR_7g070583 28.205 312 171 12 120 409 5 285 8.40e-17 81.3
MS.gene69835.t1 MTR_6g014170 28.351 194 129 5 253 446 266 449 8.55e-17 82.8
MS.gene69835.t1 MTR_5g072820 23.991 446 289 17 8 434 10 424 1.86e-16 81.6
MS.gene69835.t1 MTR_8g064870 31.915 188 118 6 253 434 266 449 2.36e-16 81.6
MS.gene69835.t1 MTR_0891s0010 26.852 216 140 6 221 427 52 258 2.69e-16 79.7
MS.gene69835.t1 MTR_6g013920 25.077 323 201 13 131 427 140 447 3.74e-16 80.9
MS.gene69835.t1 MTR_3g479610 28.655 171 113 4 257 427 120 281 3.80e-16 79.7
MS.gene69835.t1 MTR_1g107375 30.769 195 123 5 240 434 247 429 4.68e-16 80.5
MS.gene69835.t1 MTR_7g011470 29.082 196 125 6 253 446 266 449 6.29e-16 80.1
MS.gene69835.t1 MTR_3g479490 23.744 438 258 20 7 394 5 416 6.70e-16 80.1
MS.gene69835.t1 MTR_6g014220 22.269 476 313 16 8 446 10 465 6.72e-16 80.1
MS.gene69835.t1 MTR_5g058320 23.195 457 276 15 4 420 7 428 6.78e-16 80.1
MS.gene69835.t1 MTR_1g107365 31.214 173 108 4 240 412 286 447 7.18e-16 80.1
MS.gene69835.t1 MTR_6g014020 29.121 182 119 5 253 434 284 455 8.00e-16 80.1
MS.gene69835.t1 MTR_5g090600 24.803 254 159 7 216 445 199 444 8.03e-16 79.7
MS.gene69835.t1 MTR_5g072860 21.225 457 307 14 8 439 18 446 9.95e-16 79.7
MS.gene69835.t1 MTR_3g031450 25.000 220 141 4 220 427 213 420 1.84e-15 79.0
MS.gene69835.t1 MTR_6g014200 23.974 463 299 17 8 434 7 452 2.35e-15 78.6
MS.gene69835.t1 MTR_5g072810 22.444 450 294 19 8 434 12 429 2.46e-15 78.2
MS.gene69835.t1 MTR_6g014270 21.730 474 298 18 8 434 7 454 2.55e-15 78.6
MS.gene69835.t1 MTR_2g008210 30.682 176 113 6 253 427 278 445 3.09e-15 78.2
MS.gene69835.t1 MTR_8g056740 24.893 233 159 5 210 431 111 338 3.13e-15 77.8
MS.gene69835.t1 MTR_6g013990 26.374 182 124 5 253 434 282 453 4.28e-15 77.8
MS.gene69835.t1 MTR_1g107285 32.530 166 101 4 249 412 263 419 4.38e-15 77.8
MS.gene69835.t1 MTR_6g014190 31.361 169 104 5 253 419 91 249 4.39e-15 75.9
MS.gene69835.t1 MTR_3g008010 28.497 193 122 7 257 446 286 465 4.64e-15 77.4
MS.gene69835.t1 MTR_8g059425 24.249 466 292 22 8 434 10 453 4.93e-15 77.4
MS.gene69835.t1 MTR_5g072830 23.661 448 288 19 8 434 10 424 5.81e-15 77.0
MS.gene69835.t1 MTR_4g117890 27.749 191 120 6 257 432 260 447 9.54e-15 76.6
MS.gene69835.t1 MTR_1g040310 22.444 401 230 15 64 416 75 442 1.17e-14 76.3
MS.gene69835.t1 MTR_5g016480 33.036 112 73 2 251 361 267 377 1.36e-14 76.3
MS.gene69835.t1 MTR_8g007585 28.125 192 124 6 257 446 200 379 1.52e-14 75.5
MS.gene69835.t1 MTR_6g013450 21.776 473 306 14 4 429 7 462 1.76e-14 75.9
MS.gene69835.t1 MTR_6g014250 28.333 180 115 6 257 434 286 453 2.16e-14 75.5
MS.gene69835.t1 MTR_6g014310 24.918 305 194 12 147 434 170 456 2.20e-14 75.5
MS.gene69835.t1 MTR_5g072840 22.472 445 297 17 8 434 10 424 3.11e-14 74.7
MS.gene69835.t1 MTR_5g004940 32.090 134 89 2 242 374 182 314 3.93e-14 74.3
MS.gene69835.t1 MTR_6g014050 28.571 182 116 6 255 434 287 456 1.15e-13 73.2
MS.gene69835.t1 MTR_6g014240 26.923 182 123 5 253 434 251 422 2.18e-13 72.4
MS.gene69835.t1 MTR_4g118000 21.719 442 291 15 6 417 10 426 3.82e-13 71.6
MS.gene69835.t1 MTR_8g009840 30.476 210 124 5 224 419 289 490 4.43e-13 71.6
MS.gene69835.t1 MTR_6g014150 29.655 145 95 4 253 395 281 420 9.01e-13 70.5
MS.gene69835.t1 MTR_6g014040 27.473 182 122 5 253 434 285 456 9.72e-13 70.5
MS.gene69835.t1 MTR_6g014187 23.191 470 294 21 8 434 10 455 9.92e-13 70.5
MS.gene69835.t1 MTR_7g080900 31.214 173 109 6 257 429 264 426 1.07e-12 70.1
MS.gene69835.t1 MTR_7g039550 24.000 250 159 7 220 447 5 245 1.37e-12 68.2
MS.gene69835.t1 MTR_6g078320 27.179 195 132 2 236 420 252 446 2.24e-12 69.3
MS.gene69835.t1 MTR_4g064987 29.114 237 138 10 212 432 205 427 5.17e-12 68.2
MS.gene69835.t1 MTR_4g064987 28.936 235 141 10 212 432 199 421 5.31e-12 67.8
MS.gene69835.t1 MTR_0036s0220 22.757 457 295 20 8 428 12 446 5.50e-12 68.2
MS.gene69835.t1 MTR_6g014290 29.787 141 92 4 257 395 286 421 8.77e-12 67.4
MS.gene69835.t1 MTR_2086s0010 26.846 149 100 4 279 427 1 140 9.01e-12 63.9
MS.gene69835.t1 MTR_1996s0010 26.846 149 100 4 279 427 1 140 9.01e-12 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69835.t1 AT5G54010 44.835 455 240 6 5 458 3 447 1.22e-143 419
MS.gene69835.t1 AT4G27570 44.298 456 236 7 7 458 6 447 7.75e-143 416
MS.gene69835.t1 AT5G53990 45.033 453 232 6 7 458 5 441 1.89e-141 413
MS.gene69835.t1 AT4G27560 44.298 456 236 7 7 458 6 447 2.88e-140 410
MS.gene69835.t1 AT5G54060 44.685 461 244 7 5 458 10 466 3.12e-139 408
MS.gene69835.t1 AT2G22930 44.812 453 233 6 7 458 5 441 2.94e-138 404
MS.gene69835.t1 AT1G64920 43.982 457 235 6 7 458 5 445 1.41e-137 403
MS.gene69835.t1 AT4G09500 43.875 449 235 6 7 454 5 437 8.46e-137 400
MS.gene69835.t1 AT1G64910 43.709 453 238 6 7 458 5 441 1.26e-135 398
MS.gene69835.t1 AT3G29630 43.640 456 233 7 5 454 3 440 5.88e-135 396
MS.gene69835.t1 AT3G29630 43.046 453 214 7 5 454 3 414 2.44e-128 378
MS.gene69835.t1 AT4G09500 42.188 448 219 7 7 454 5 412 2.11e-124 368
MS.gene69835.t1 AT1G50580 41.978 455 240 7 5 454 3 438 7.14e-123 365
MS.gene69835.t1 AT2G22590 34.914 464 275 17 7 454 14 466 3.49e-70 230
MS.gene69835.t1 AT5G49690 31.938 454 288 11 7 452 9 449 9.55e-66 218
MS.gene69835.t1 AT5G65550 31.667 480 281 19 1 454 1 459 1.36e-64 216
MS.gene69835.t1 AT2G22930 39.631 217 117 3 7 223 5 207 3.52e-50 172
MS.gene69835.t1 AT2G22930 35.238 105 63 3 357 458 187 289 9.91e-13 68.9
MS.gene69835.t1 AT5G12890 26.915 483 274 19 4 437 6 458 2.15e-33 132
MS.gene69835.t1 AT5G03490 25.885 452 283 13 6 435 17 438 5.20e-33 130
MS.gene69835.t1 AT4G36770 27.957 465 272 18 7 435 3 440 6.28e-32 127
MS.gene69835.t1 AT1G73880 27.230 426 261 14 2 399 8 412 6.79e-32 127
MS.gene69835.t1 AT1G51210 27.107 439 281 14 8 433 20 432 1.66e-31 125
MS.gene69835.t1 AT1G05675 27.902 448 277 16 8 434 6 428 9.17e-31 124
MS.gene69835.t1 AT2G15480 25.490 459 302 13 7 434 9 458 9.99e-31 124
MS.gene69835.t1 AT2G16890 27.706 462 296 20 8 445 9 456 1.39e-30 124
MS.gene69835.t1 AT4G34131 26.237 465 289 18 2 428 4 452 2.07e-30 123
MS.gene69835.t1 AT2G15480 25.828 453 296 13 7 428 9 452 2.83e-30 123
MS.gene69835.t1 AT2G15490 26.419 458 291 16 7 430 6 451 5.88e-30 122
MS.gene69835.t1 AT2G15490 26.464 461 290 17 7 430 6 454 6.87e-30 122
MS.gene69835.t1 AT2G36800 28.879 464 277 21 5 427 9 460 1.32e-28 118
MS.gene69835.t1 AT4G34135 28.446 457 255 21 7 416 10 441 1.58e-28 118
MS.gene69835.t1 AT2G18570 25.380 461 298 14 1 434 1 442 8.08e-28 115
MS.gene69835.t1 AT2G16890 27.465 426 276 18 8 412 9 422 8.93e-28 115
MS.gene69835.t1 AT2G36770 27.766 461 283 20 6 427 12 461 1.09e-27 115
MS.gene69835.t1 AT1G10400 25.840 476 306 20 7 452 6 464 2.52e-27 114
MS.gene69835.t1 AT5G14860 25.502 498 304 18 1 454 1 475 5.55e-27 113
MS.gene69835.t1 AT2G36750 28.009 457 271 19 6 421 8 447 6.06e-27 113
MS.gene69835.t1 AT2G31790 25.942 451 284 17 8 434 8 432 1.61e-26 112
MS.gene69835.t1 AT4G34138 25.265 471 272 16 5 424 8 449 1.71e-26 112
MS.gene69835.t1 AT2G31750 24.895 478 271 16 1 436 1 432 3.84e-26 111
MS.gene69835.t1 AT2G31750 24.895 478 271 16 1 436 1 432 3.91e-26 110
MS.gene69835.t1 AT1G05680 26.116 448 285 15 8 434 6 428 5.67e-26 110
MS.gene69835.t1 AT2G36780 27.451 459 285 19 7 427 13 461 6.38e-26 110
MS.gene69835.t1 AT3G53150 27.176 471 281 17 7 427 21 479 2.68e-25 108
MS.gene69835.t1 AT2G18560 30.980 255 149 7 201 434 104 352 3.12e-25 107
MS.gene69835.t1 AT2G36760 26.638 458 277 17 6 421 12 452 1.01e-24 107
MS.gene69835.t1 AT1G01420 35.981 214 116 6 236 434 235 442 1.45e-24 106
MS.gene69835.t1 AT1G01420 25.813 461 282 16 8 434 11 445 1.49e-24 106
MS.gene69835.t1 AT4G01070 35.047 214 121 6 236 435 235 444 1.59e-24 106
MS.gene69835.t1 AT3G50740 23.747 459 303 14 8 435 7 449 4.05e-24 105
MS.gene69835.t1 AT2G43820 24.145 468 292 17 8 449 7 437 1.58e-23 103
MS.gene69835.t1 AT5G59580 25.758 462 305 17 8 454 9 447 1.93e-23 102
MS.gene69835.t1 AT3G46670 25.427 468 318 16 2 457 3 451 3.63e-23 102
MS.gene69835.t1 AT2G29730 26.477 457 286 18 7 433 4 440 4.24e-23 102
MS.gene69835.t1 AT3G53160 26.022 465 293 22 1 427 1 452 7.18e-23 101
MS.gene69835.t1 AT5G66690 24.283 453 301 15 8 435 7 442 3.89e-22 99.4
MS.gene69835.t1 AT2G36970 23.778 450 313 13 8 437 10 449 4.69e-22 99.0
MS.gene69835.t1 AT2G36790 26.237 465 293 17 2 427 7 460 9.98e-22 98.2
MS.gene69835.t1 AT5G59590 24.625 467 305 19 8 454 10 449 1.41e-21 97.4
MS.gene69835.t1 AT1G07250 27.341 267 179 7 203 456 210 474 2.90e-21 96.7
MS.gene69835.t1 AT2G43840 31.579 190 120 4 259 448 257 436 3.77e-21 95.9
MS.gene69835.t1 AT2G43840 31.579 190 120 4 259 448 257 436 4.14e-21 95.9
MS.gene69835.t1 AT4G15280 30.841 214 130 4 257 454 294 505 4.77e-21 96.3
MS.gene69835.t1 AT4G15280 30.841 214 130 4 257 454 262 473 6.72e-21 95.5
MS.gene69835.t1 AT3G21760 29.907 214 132 5 257 454 269 480 1.20e-20 94.7
MS.gene69835.t1 AT5G26310 30.213 235 141 5 236 452 233 462 2.05e-20 94.0
MS.gene69835.t1 AT4G15260 29.767 215 132 5 257 454 142 354 2.06e-20 92.8
MS.gene69835.t1 AT5G05880 25.843 445 283 18 1 425 1 418 2.17e-20 93.6
MS.gene69835.t1 AT4G15480 30.909 220 134 8 227 434 241 454 2.79e-20 93.6
MS.gene69835.t1 AT2G30140 24.711 433 288 17 8 427 13 420 4.19e-20 92.8
MS.gene69835.t1 AT3G21800 29.767 215 132 4 257 454 263 475 8.59e-20 92.0
MS.gene69835.t1 AT2G30140 24.714 437 282 18 8 427 13 419 1.04e-19 91.7
MS.gene69835.t1 AT3G11340 24.554 448 279 17 9 434 10 420 1.37e-19 91.3
MS.gene69835.t1 AT1G01390 31.538 260 146 10 184 427 197 440 1.72e-19 91.3
MS.gene69835.t1 AT1G01390 31.538 260 146 10 184 427 214 457 2.26e-19 90.9
MS.gene69835.t1 AT2G30150 22.793 487 308 20 4 458 6 456 3.51e-19 90.1
MS.gene69835.t1 AT3G21790 28.016 257 161 6 220 454 224 478 4.19e-19 90.1
MS.gene69835.t1 AT2G29710 31.980 197 116 7 245 433 254 440 5.10e-19 89.7
MS.gene69835.t1 AT3G46660 34.259 216 121 9 236 445 237 437 6.59e-19 89.4
MS.gene69835.t1 AT3G21750 28.033 239 150 5 236 454 232 468 7.02e-19 89.4
MS.gene69835.t1 AT3G21780 29.439 214 133 5 257 454 257 468 1.04e-18 89.0
MS.gene69835.t1 AT4G15550 22.004 459 320 15 2 436 7 451 1.15e-18 88.6
MS.gene69835.t1 AT5G05870 28.692 237 153 7 206 435 204 431 1.37e-18 88.6
MS.gene69835.t1 AT2G29740 32.500 200 125 6 236 427 250 447 1.54e-18 88.2
MS.gene69835.t1 AT5G05860 24.615 455 294 16 7 445 8 429 1.96e-18 87.8
MS.gene69835.t1 AT3G16520 32.787 183 112 4 257 435 261 436 2.34e-18 87.8
MS.gene69835.t1 AT5G05890 29.461 241 155 7 201 434 198 430 2.57e-18 87.4
MS.gene69835.t1 AT3G16520 32.787 183 112 4 257 435 261 436 2.62e-18 87.4
MS.gene69835.t1 AT3G16520 31.959 194 121 4 257 446 261 447 2.79e-18 87.4
MS.gene69835.t1 AT4G15490 22.845 464 306 16 1 434 1 442 3.66e-18 87.0
MS.gene69835.t1 AT1G24100 29.167 192 127 4 257 448 266 448 8.43e-18 85.9
MS.gene69835.t1 AT3G21560 31.111 180 114 6 257 434 277 448 9.21e-18 85.9
MS.gene69835.t1 AT4G15500 30.939 181 115 6 257 435 267 439 1.16e-17 85.5
MS.gene69835.t1 AT1G07260 27.948 229 153 6 236 454 245 471 1.33e-17 85.5
MS.gene69835.t1 AT1G07240 31.797 217 136 7 227 434 242 455 1.36e-17 85.5
MS.gene69835.t1 AT1G22360 23.830 470 292 19 8 436 10 454 1.76e-17 85.1
MS.gene69835.t1 AT2G30150 22.526 475 303 19 13 458 2 440 2.06e-17 84.7
MS.gene69835.t1 AT3G55700 28.571 245 163 7 206 445 203 440 2.18e-17 84.7
MS.gene69835.t1 AT1G06000 24.088 411 242 15 8 394 10 374 3.02e-17 84.0
MS.gene69835.t1 AT3G22250 32.512 203 105 9 257 450 274 453 4.25e-17 84.0
MS.gene69835.t1 AT2G29750 32.973 185 114 6 241 417 255 437 6.07e-17 83.6
MS.gene69835.t1 AT1G05530 25.391 256 163 7 222 455 206 455 1.28e-16 82.4
MS.gene69835.t1 AT1G22400 23.581 458 291 17 8 427 13 449 1.72e-16 82.0
MS.gene69835.t1 AT3G55710 30.688 189 122 5 259 445 263 444 2.05e-16 81.6
MS.gene69835.t1 AT5G38040 24.781 456 302 19 16 454 18 449 2.60e-16 81.3
MS.gene69835.t1 AT5G38010 24.301 465 286 19 8 445 10 435 2.84e-16 81.3
MS.gene69835.t1 AT2G23250 28.017 232 149 7 235 454 210 435 5.33e-16 80.5
MS.gene69835.t1 AT1G22360 23.832 428 267 17 8 394 10 419 3.38e-15 78.2
MS.gene69835.t1 AT1G05560 27.354 223 141 7 241 448 275 491 3.43e-15 78.2
MS.gene69835.t1 AT1G05560 26.033 242 158 7 222 448 206 441 4.12e-15 77.8
MS.gene69835.t1 AT3G46690 29.500 200 131 6 202 394 196 392 4.40e-15 77.4
MS.gene69835.t1 AT2G23260 27.700 213 133 6 235 432 223 429 5.74e-15 77.4
MS.gene69835.t1 AT2G28080 25.417 240 157 7 214 435 220 455 6.47e-15 77.0
MS.gene69835.t1 AT4G14090 26.923 234 155 8 223 448 220 445 1.31e-14 76.3
MS.gene69835.t1 AT5G17050 27.624 181 116 6 257 436 268 434 1.75e-14 75.9
MS.gene69835.t1 AT2G26480 25.501 349 220 15 112 445 104 427 3.99e-14 74.7
MS.gene69835.t1 AT1G78270 28.495 186 120 6 253 436 283 457 5.47e-14 74.3
MS.gene69835.t1 AT5G05900 22.979 470 298 22 1 436 1 440 2.05e-13 72.4
MS.gene69835.t1 AT1G22380 21.987 473 297 18 8 436 13 457 3.12e-13 72.0
MS.gene69835.t1 AT3G02100 30.899 178 102 6 257 432 277 435 8.08e-13 70.5
MS.gene69835.t1 AT3G46720 22.779 439 286 16 8 428 9 412 1.35e-12 69.7
MS.gene69835.t1 AT1G22340 27.568 185 123 5 253 436 284 458 1.47e-12 69.7
MS.gene69835.t1 AT5G17030 25.751 233 153 8 210 436 215 433 1.55e-12 69.7
MS.gene69835.t1 AT5G17040 26.111 180 120 5 257 436 251 417 2.66e-11 65.9
MS.gene69835.t1 AT5G17040 26.111 180 120 5 257 436 149 315 5.64e-11 64.3

Find 86 sgRNAs with CRISPR-Local

Find 102 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTAAACCTGTTCTGCTTTC+AGG 0.094372 2.2:+13932620 MS.gene69835:CDS
ATCACAGTTCCTCATGTTAA+TGG 0.256113 2.2:+13932110 MS.gene69835:CDS
CCAAGGTAAGCTGATGATAT+TGG 0.272835 2.2:-13932338 None:intergenic
AAAGTCTTCAATACTTGATA+TGG 0.289217 2.2:+13932312 MS.gene69835:CDS
ACCCTTTCATTGAACCCTTC+TGG 0.299693 2.2:-13932866 None:intergenic
TCGACCAGGAAAATAGAATT+TGG 0.319466 2.2:+13932479 MS.gene69835:CDS
ATTAGAACAAAATCAATTTC+AGG 0.343025 2.2:+13932754 MS.gene69835:CDS
TTACTTGGTCTTGAATTAAC+AGG 0.344148 2.2:+13932782 MS.gene69835:CDS
GGGACAAAGGTAATAAGATT+TGG 0.347167 2.2:-13932086 None:intergenic
TTGTTTGAGAAGTGAAGATA+TGG 0.359782 2.2:-13931984 None:intergenic
ATAAGAGGGAACAAAGAAAA+AGG 0.360358 2.2:-13932167 None:intergenic
TTCTCCTCTAAAGTAGCTTT+CGG 0.371240 2.2:-13932662 None:intergenic
CAATTTCAGGAGTTGTTACT+TGG 0.377973 2.2:+13932767 MS.gene69835:CDS
GCAGCACTTAAGCCACCTAT+TGG 0.380205 2.2:+13932818 MS.gene69835:CDS
AACGGAAAAGGGATTGTATA+TGG 0.383664 2.2:+13932890 MS.gene69835:CDS
TTAACATGAGGAACTGTGAT+AGG 0.385255 2.2:-13932107 None:intergenic
GGCTTAAGTGCTGCAAGAAA+TGG 0.387827 2.2:-13932809 None:intergenic
CCCTCTTATTGCTACGGCCA+TGG 0.389322 2.2:+13932181 MS.gene69835:CDS
GAAATGGTTAACATGGCTTA+AGG 0.394243 2.2:+13932682 MS.gene69835:CDS
TCAATTGACTCAAATCCAAT+AGG 0.400322 2.2:-13932833 None:intergenic
AAGGGATTGTATATGGAAGT+TGG 0.412108 2.2:+13932897 MS.gene69835:CDS
TTCATGTGAATGAAACTTGA+TGG 0.413535 2.2:-13932441 None:intergenic
TGAAACTTGATGGATGAATC+AGG 0.414033 2.2:-13932431 None:intergenic
TCAAACAAATTAGCATTAAG+AGG 0.414964 2.2:+13931999 MS.gene69835:CDS
AATGAAAGGGTTAACGGAAA+AGG 0.417475 2.2:+13932878 MS.gene69835:CDS
ATTCTAGAACATCCTTCTGT+TGG 0.422732 2.2:+13932935 MS.gene69835:CDS
AAAGGTTGCAGAGAAATTGA+TGG 0.427334 2.2:+13932566 MS.gene69835:CDS
AAGCTACTTTAGAGGAGAAA+TGG 0.428441 2.2:+13932666 MS.gene69835:CDS
ATGAAAGGGTTAACGGAAAA+GGG 0.428445 2.2:+13932879 MS.gene69835:CDS
GTTGAGAAAGGTGATGAAGA+TGG 0.433750 2.2:+13933100 MS.gene69835:CDS
AAATGGTTAACATGGCTTAA+GGG 0.439679 2.2:+13932683 MS.gene69835:CDS
AGAGGACCTGAAAGCAGAAC+AGG 0.445486 2.2:-13932626 None:intergenic
ATGGATGATGAGAATGAGAT+TGG 0.447685 2.2:+13933166 MS.gene69835:CDS
TTGTTTATCTGTTTGATCCA+TGG 0.450820 2.2:-13932198 None:intergenic
CTTTAGTTAAATATGTTCCT+TGG 0.452093 2.2:-13932379 None:intergenic
AATGTTTCCATGGTTTGCTA+TGG 0.456397 2.2:+13931950 MS.gene69835:CDS
ACCAGAAGGGTTCAATGAAA+GGG 0.459081 2.2:+13932865 MS.gene69835:CDS
GGCACCGAAAGCTACTTTAG+AGG 0.459571 2.2:+13932658 MS.gene69835:CDS
AGTGATGAGTACAAAGTTGA+AGG 0.465574 2.2:+13933066 MS.gene69835:CDS
TTTGTTCCCTCTTATTGCTA+CGG 0.466544 2.2:+13932175 MS.gene69835:CDS
CTGGTGTTGTTGCCACGTCT+TGG 0.470989 2.2:+13933019 MS.gene69835:CDS
GGGTTCAATGAAAGGGTTAA+CGG 0.473318 2.2:+13932872 MS.gene69835:CDS
TACCAGAAGGGTTCAATGAA+AGG 0.478236 2.2:+13932864 MS.gene69835:CDS
AAAGTAGCTTTCGGTGCCTC+AGG 0.479624 2.2:-13932653 None:intergenic
TTGAAGAAGCTTTACCAGAA+GGG 0.482277 2.2:+13932852 MS.gene69835:CDS
TCCATGGCCGTAGCAATAAG+AGG 0.485550 2.2:-13932182 None:intergenic
TTGTATGACCGCGTTGACAT+AGG 0.493864 2.2:+13932515 MS.gene69835:CDS
ATGATTCTAAATTGTTGCTA+AGG 0.495803 2.2:-13933231 None:intergenic
ATTCTAAATTGTTGCTAAGG+AGG 0.503967 2.2:-13933228 None:intergenic
ATGTTTCCATGGTTTGCTAT+GGG 0.504571 2.2:+13931951 MS.gene69835:CDS
TGCACATAGCAATGTTTCCA+TGG 0.504753 2.2:+13931940 MS.gene69835:CDS
TCAGATGCAGTTGCTTTCAA+AGG 0.512600 2.2:+13932548 MS.gene69835:CDS
TTCGGTGCCTCAGGTAATAG+AGG 0.520927 2.2:-13932644 None:intergenic
CCAATATCATCAGCTTACCT+TGG 0.525225 2.2:+13932338 MS.gene69835:CDS
GTTGGTATAGAAGTTGAGAA+AGG 0.534215 2.2:+13933088 MS.gene69835:CDS
ATGAGTACAAAGTTGAAGGT+TGG 0.534783 2.2:+13933070 MS.gene69835:CDS
GATGAATCAGGGAACCCAGC+AGG 0.547907 2.2:-13932419 None:intergenic
TTCGCTTCTTAGCTTCGACC+AGG 0.551610 2.2:+13932465 MS.gene69835:CDS
ATTGAAGAAGCTTTACCAGA+AGG 0.553775 2.2:+13932851 MS.gene69835:CDS
TTGAGAAAGGTGATGAAGAT+GGG 0.554445 2.2:+13933101 MS.gene69835:CDS
TGGAGCTGCTTCTATTACTG+AGG 0.555465 2.2:+13932976 MS.gene69835:CDS
TAGAGGAGAAATGGTTAACA+TGG 0.564341 2.2:+13932675 MS.gene69835:CDS
ATTGCTATGTGCAAAGGAGA+AGG 0.567370 2.2:-13931930 None:intergenic
ACTTGTTAACACGTGTCAGC+TGG 0.567449 2.2:+13933000 MS.gene69835:CDS
GGGATTCAAACATGGTTCTG+TGG 0.569145 2.2:+13932703 MS.gene69835:CDS
TAACATGAGGAACTGTGATA+GGG 0.579312 2.2:-13932106 None:intergenic
ATGTTTCTGCATCATGTGGA+AGG 0.581236 2.2:-13932133 None:intergenic
TCTTGCATTCATGATATGAT+CGG 0.585265 2.2:-13933044 None:intergenic
TTCAGGTCCTCTATTACCTG+AGG 0.585305 2.2:+13932637 MS.gene69835:CDS
CAAAGCTGTGAAAATTGTGA+TGG 0.587557 2.2:+13933147 MS.gene69835:CDS
GAAACTTGATGGATGAATCA+GGG 0.588417 2.2:-13932430 None:intergenic
TGGCTTAAGGGATTCAAACA+TGG 0.589723 2.2:+13932695 MS.gene69835:CDS
ATTGACTCAAATCCAATAGG+TGG 0.595901 2.2:-13932830 None:intergenic
GGAAACATTGCTATGTGCAA+AGG 0.601320 2.2:-13931936 None:intergenic
GGAGCTGCTTCTATTACTGA+GGG 0.605900 2.2:+13932977 MS.gene69835:CDS
GAAGATGTTTCTGCATCATG+TGG 0.620712 2.2:-13932137 None:intergenic
AGGAACTGTGATAGGGACAA+AGG 0.624768 2.2:-13932099 None:intergenic
GTAATGAAACATCCAACAGA+AGG 0.629473 2.2:-13932947 None:intergenic
CCATGGCCGTAGCAATAAGA+GGG 0.636454 2.2:-13932181 None:intergenic
AGGAAAATAGAATTTGGCAG+TGG 0.637851 2.2:+13932485 MS.gene69835:CDS
GAATCAGGGAACCCAGCAGG+TGG 0.657090 2.2:-13932416 None:intergenic
AAGTGTCCCATAGCAAACCA+TGG 0.661811 2.2:-13931957 None:intergenic
TGTGGAAGGCCATTAACATG+AGG 0.687192 2.2:-13932119 None:intergenic
ATATGATCGGAACCAAGACG+TGG 0.688479 2.2:-13933031 None:intergenic
GGATGTTTCATTACACACTG+TGG 0.709910 2.2:+13932956 MS.gene69835:CDS
ACTTTGTGCCTATGTCAACG+CGG 0.796524 2.2:-13932523 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATCAAAGAAAACTATTTT+TGG - chr2.2:13932251-13932270 None:intergenic 15.0%
!!! TTTTCTTTGATTTTCAATAT+TGG + chr2.2:13932258-13932277 MS.gene69835:CDS 15.0%
!! ATTAGAACAAAATCAATTTC+AGG + chr2.2:13932754-13932773 MS.gene69835:CDS 20.0%
!!! TGAAATTGATTTTGTTCTAA+TGG - chr2.2:13932755-13932774 None:intergenic 20.0%
! AAAGTCTTCAATACTTGATA+TGG + chr2.2:13932312-13932331 MS.gene69835:CDS 25.0%
! ATGATTCTAAATTGTTGCTA+AGG - chr2.2:13933234-13933253 None:intergenic 25.0%
! CTTTAGTTAAATATGTTCCT+TGG - chr2.2:13932382-13932401 None:intergenic 25.0%
! TCAAACAAATTAGCATTAAG+AGG + chr2.2:13931999-13932018 MS.gene69835:CDS 25.0%
!! ACAAATTGAACTTCTTTTGA+AGG + chr2.2:13932217-13932236 MS.gene69835:CDS 25.0%
!! GATTATCTTCAAACTGTTTT+TGG + chr2.2:13932599-13932618 MS.gene69835:CDS 25.0%
!! TTTTTCTTGGTATATTTCCA+AGG - chr2.2:13932358-13932377 None:intergenic 25.0%
!!! AACTTGTTGAGTGTATTTTT+AGG - chr2.2:13932047-13932066 None:intergenic 25.0%
AAATGGTTAACATGGCTTAA+GGG + chr2.2:13932683-13932702 MS.gene69835:CDS 30.0%
AATATACCAAGAAAAAGCCA+AGG + chr2.2:13932362-13932381 MS.gene69835:CDS 30.0%
ATAAGAGGGAACAAAGAAAA+AGG - chr2.2:13932170-13932189 None:intergenic 30.0%
ATTCTAAATTGTTGCTAAGG+AGG - chr2.2:13933231-13933250 None:intergenic 30.0%
TCTTGCATTCATGATATGAT+CGG - chr2.2:13933047-13933066 None:intergenic 30.0%
TTCATGTGAATGAAACTTGA+TGG - chr2.2:13932444-13932463 None:intergenic 30.0%
TTGTTTATCTGTTTGATCCA+TGG - chr2.2:13932201-13932220 None:intergenic 30.0%
TTGTTTGAGAAGTGAAGATA+TGG - chr2.2:13931987-13932006 None:intergenic 30.0%
! TCAATTGACTCAAATCCAAT+AGG - chr2.2:13932836-13932855 None:intergenic 30.0%
!! TTACTTGGTCTTGAATTAAC+AGG + chr2.2:13932782-13932801 MS.gene69835:CDS 30.0%
AAAGGTTGCAGAGAAATTGA+TGG + chr2.2:13932566-13932585 MS.gene69835:CDS 35.0%
AACGGAAAAGGGATTGTATA+TGG + chr2.2:13932890-13932909 MS.gene69835:CDS 35.0%
AAGGGATTGTATATGGAAGT+TGG + chr2.2:13932897-13932916 MS.gene69835:CDS 35.0%
AATGAAAGGGTTAACGGAAA+AGG + chr2.2:13932878-13932897 MS.gene69835:CDS 35.0%
AGGAAAATAGAATTTGGCAG+TGG + chr2.2:13932485-13932504 MS.gene69835:CDS 35.0%
AGTGATGAGTACAAAGTTGA+AGG + chr2.2:13933066-13933085 MS.gene69835:CDS 35.0%
ATCACAGTTCCTCATGTTAA+TGG + chr2.2:13932110-13932129 MS.gene69835:CDS 35.0%
ATGAAAGGGTTAACGGAAAA+GGG + chr2.2:13932879-13932898 MS.gene69835:CDS 35.0%
ATGAGTACAAAGTTGAAGGT+TGG + chr2.2:13933070-13933089 MS.gene69835:CDS 35.0%
ATGGATGATGAGAATGAGAT+TGG + chr2.2:13933166-13933185 MS.gene69835:CDS 35.0%
ATTGAAGAAGCTTTACCAGA+AGG + chr2.2:13932851-13932870 MS.gene69835:CDS 35.0%
CAAAGCTGTGAAAATTGTGA+TGG + chr2.2:13933147-13933166 MS.gene69835:CDS 35.0%
CAATTTCAGGAGTTGTTACT+TGG + chr2.2:13932767-13932786 MS.gene69835:CDS 35.0%
CCAAACTTGACTCAAAAACT+TGG + chr2.2:13932284-13932303 MS.gene69835:CDS 35.0%
GAAATGGTTAACATGGCTTA+AGG + chr2.2:13932682-13932701 MS.gene69835:CDS 35.0%
GGGACAAAGGTAATAAGATT+TGG - chr2.2:13932089-13932108 None:intergenic 35.0%
GTAATGAAACATCCAACAGA+AGG - chr2.2:13932950-13932969 None:intergenic 35.0%
GTTGGTATAGAAGTTGAGAA+AGG + chr2.2:13933088-13933107 MS.gene69835:CDS 35.0%
TAACATGAGGAACTGTGATA+GGG - chr2.2:13932109-13932128 None:intergenic 35.0%
TAGAGGAGAAATGGTTAACA+TGG + chr2.2:13932675-13932694 MS.gene69835:CDS 35.0%
TCGACCAGGAAAATAGAATT+TGG + chr2.2:13932479-13932498 MS.gene69835:CDS 35.0%
TTAACATGAGGAACTGTGAT+AGG - chr2.2:13932110-13932129 None:intergenic 35.0%
TTGAAGAAGCTTTACCAGAA+GGG + chr2.2:13932852-13932871 MS.gene69835:CDS 35.0%
TTGAGAAAGGTGATGAAGAT+GGG + chr2.2:13933101-13933120 MS.gene69835:CDS 35.0%
TTTGTTCCCTCTTATTGCTA+CGG + chr2.2:13932175-13932194 MS.gene69835:CDS 35.0%
! AAGCTACTTTAGAGGAGAAA+TGG + chr2.2:13932666-13932685 MS.gene69835:CDS 35.0%
! ACTGCCAAATTCTATTTTCC+TGG - chr2.2:13932486-13932505 None:intergenic 35.0%
! ATTGACTCAAATCCAATAGG+TGG - chr2.2:13932833-13932852 None:intergenic 35.0%
! GAAACTTGATGGATGAATCA+GGG - chr2.2:13932433-13932452 None:intergenic 35.0%
! TGAAACTTGATGGATGAATC+AGG - chr2.2:13932434-13932453 None:intergenic 35.0%
!! AATGTTTCCATGGTTTGCTA+TGG + chr2.2:13931950-13931969 MS.gene69835:CDS 35.0%
!! ATGTTTCCATGGTTTGCTAT+GGG + chr2.2:13931951-13931970 MS.gene69835:CDS 35.0%
!! ATTCTAGAACATCCTTCTGT+TGG + chr2.2:13932935-13932954 MS.gene69835:CDS 35.0%
!! TATGTTCCTTGGCTTTTTCT+TGG - chr2.2:13932371-13932390 None:intergenic 35.0%
!! TTCTCCTCTAAAGTAGCTTT+CGG - chr2.2:13932665-13932684 None:intergenic 35.0%
!!! CCAAGTTTTTGAGTCAAGTT+TGG - chr2.2:13932287-13932306 None:intergenic 35.0%
ACCAGAAGGGTTCAATGAAA+GGG + chr2.2:13932865-13932884 MS.gene69835:CDS 40.0%
ATCTCAAAAAACCACCTGCT+GGG + chr2.2:13932405-13932424 MS.gene69835:CDS 40.0%
ATTGCTATGTGCAAAGGAGA+AGG - chr2.2:13931933-13931952 None:intergenic 40.0%
CCAAGGTAAGCTGATGATAT+TGG - chr2.2:13932341-13932360 None:intergenic 40.0%
CCAATATCATCAGCTTACCT+TGG + chr2.2:13932338-13932357 MS.gene69835:CDS 40.0%
GGAAACATTGCTATGTGCAA+AGG - chr2.2:13931939-13931958 None:intergenic 40.0%
GGATGTTTCATTACACACTG+TGG + chr2.2:13932956-13932975 MS.gene69835:CDS 40.0%
GGGTTCAATGAAAGGGTTAA+CGG + chr2.2:13932872-13932891 MS.gene69835:CDS 40.0%
GTTGAGAAAGGTGATGAAGA+TGG + chr2.2:13933100-13933119 MS.gene69835:CDS 40.0%
TACCAGAAGGGTTCAATGAA+AGG + chr2.2:13932864-13932883 MS.gene69835:CDS 40.0%
TGCACATAGCAATGTTTCCA+TGG + chr2.2:13931940-13931959 MS.gene69835:CDS 40.0%
TGGCTTAAGGGATTCAAACA+TGG + chr2.2:13932695-13932714 MS.gene69835:CDS 40.0%
! ATGTTTCTGCATCATGTGGA+AGG - chr2.2:13932136-13932155 None:intergenic 40.0%
! GAAGATGTTTCTGCATCATG+TGG - chr2.2:13932140-13932159 None:intergenic 40.0%
! TCAGATGCAGTTGCTTTCAA+AGG + chr2.2:13932548-13932567 MS.gene69835:CDS 40.0%
! TTTTGTGCGTATGGAAGTGA+AGG + chr2.2:13932728-13932747 MS.gene69835:CDS 40.0%
!!! TCTGTGGTTTTTTGTGCGTA+TGG + chr2.2:13932719-13932738 MS.gene69835:CDS 40.0%
AAGTGTCCCATAGCAAACCA+TGG - chr2.2:13931960-13931979 None:intergenic 45.0%
ACCCTTTCATTGAACCCTTC+TGG - chr2.2:13932869-13932888 None:intergenic 45.0%
ACTTTGTGCCTATGTCAACG+CGG - chr2.2:13932526-13932545 None:intergenic 45.0%
AGGAACTGTGATAGGGACAA+AGG - chr2.2:13932102-13932121 None:intergenic 45.0%
ATATGATCGGAACCAAGACG+TGG - chr2.2:13933034-13933053 None:intergenic 45.0%
GATCTCAAAAAACCACCTGC+TGG + chr2.2:13932404-13932423 MS.gene69835:CDS 45.0%
GGAGCTGCTTCTATTACTGA+GGG + chr2.2:13932977-13932996 MS.gene69835:CDS 45.0%
GGTAAACCTGTTCTGCTTTC+AGG + chr2.2:13932620-13932639 MS.gene69835:CDS 45.0%
TGGAGCTGCTTCTATTACTG+AGG + chr2.2:13932976-13932995 MS.gene69835:CDS 45.0%
TGTGGAAGGCCATTAACATG+AGG - chr2.2:13932122-13932141 None:intergenic 45.0%
TTCAGGTCCTCTATTACCTG+AGG + chr2.2:13932637-13932656 MS.gene69835:CDS 45.0%
! ACTTGTTAACACGTGTCAGC+TGG + chr2.2:13933000-13933019 MS.gene69835:CDS 45.0%
! GGCTTAAGTGCTGCAAGAAA+TGG - chr2.2:13932812-13932831 None:intergenic 45.0%
! GGGATTCAAACATGGTTCTG+TGG + chr2.2:13932703-13932722 MS.gene69835:CDS 45.0%
! TTGTATGACCGCGTTGACAT+AGG + chr2.2:13932515-13932534 MS.gene69835:CDS 45.0%
AGAGGACCTGAAAGCAGAAC+AGG - chr2.2:13932629-13932648 None:intergenic 50.0%
CCATGGCCGTAGCAATAAGA+GGG - chr2.2:13932184-13932203 None:intergenic 50.0%
GCAGCACTTAAGCCACCTAT+TGG + chr2.2:13932818-13932837 MS.gene69835:CDS 50.0%
TCCATGGCCGTAGCAATAAG+AGG - chr2.2:13932185-13932204 None:intergenic 50.0%
TTCGCTTCTTAGCTTCGACC+AGG + chr2.2:13932465-13932484 MS.gene69835:CDS 50.0%
! GGCACCGAAAGCTACTTTAG+AGG + chr2.2:13932658-13932677 MS.gene69835:CDS 50.0%
!! AAAGTAGCTTTCGGTGCCTC+AGG - chr2.2:13932656-13932675 None:intergenic 50.0%
!! TTCGGTGCCTCAGGTAATAG+AGG - chr2.2:13932647-13932666 None:intergenic 50.0%
CCCTCTTATTGCTACGGCCA+TGG + chr2.2:13932181-13932200 MS.gene69835:CDS 55.0%
GATGAATCAGGGAACCCAGC+AGG - chr2.2:13932422-13932441 None:intergenic 55.0%
!! CTGGTGTTGTTGCCACGTCT+TGG + chr2.2:13933019-13933038 MS.gene69835:CDS 55.0%
GAATCAGGGAACCCAGCAGG+TGG - chr2.2:13932419-13932438 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 13931921 13933297 13931921 ID=MS.gene69835
chr2.2 mRNA 13931921 13933297 13931921 ID=MS.gene69835.t1;Parent=MS.gene69835
chr2.2 exon 13931921 13933297 13931921 ID=MS.gene69835.t1.exon1;Parent=MS.gene69835.t1
chr2.2 CDS 13931921 13933297 13931921 ID=cds.MS.gene69835.t1;Parent=MS.gene69835.t1
Gene Sequence

>MS.gene69835

ATGGATGCTCCTTCTCCTTTGCACATAGCAATGTTTCCATGGTTTGCTATGGGACACTTAACTCCATATCTTCACTTCTCAAACAAATTAGCATTAAGAGGTCACAAAATCTCATTCTTCATACCTAAAAATACACTCAACAAGTTACAACATCTCAATCTTCATCCAAATCTTATTACCTTTGTCCCTATCACAGTTCCTCATGTTAATGGCCTTCCACATGATGCAGAAACATCTTCTGATGTACCTTTTTCTTTGTTCCCTCTTATTGCTACGGCCATGGATCAAACAGATAAACAAATTGAACTTCTTTTGAAGGAGTTAAAGCCAAAAATAGTTTTCTTTGATTTTCAATATTGGCTACCAAACTTGACTCAAAAACTTGGTATCAAAAGTCTTCAATACTTGATATGGAATCCAATATCATCAGCTTACCTTGGAAATATACCAAGAAAAAGCCAAGGAACATATTTAACTAAAGATGATCTCAAAAAACCACCTGCTGGGTTCCCTGATTCATCCATCAAGTTTCATTCACATGAACTTCGCTTCTTAGCTTCGACCAGGAAAATAGAATTTGGCAGTGGTGTTTTATTGTATGACCGCGTTGACATAGGCACAAAGTTTTCAGATGCAGTTGCTTTCAAAGGTTGCAGAGAAATTGATGGTTTATATGCTGATTATCTTCAAACTGTTTTTGGTAAACCTGTTCTGCTTTCAGGTCCTCTATTACCTGAGGCACCGAAAGCTACTTTAGAGGAGAAATGGTTAACATGGCTTAAGGGATTCAAACATGGTTCTGTGGTTTTTTGTGCGTATGGAAGTGAAGGTCCATTAGAACAAAATCAATTTCAGGAGTTGTTACTTGGTCTTGAATTAACAGGTTTTCCATTTCTTGCAGCACTTAAGCCACCTATTGGATTTGAGTCAATTGAAGAAGCTTTACCAGAAGGGTTCAATGAAAGGGTTAACGGAAAAGGGATTGTATATGGAAGTTGGATTCAACAACAGTTGATTCTAGAACATCCTTCTGTTGGATGTTTCATTACACACTGTGGAGCTGCTTCTATTACTGAGGGACTTGTTAACACGTGTCAGCTGGTGTTGTTGCCACGTCTTGGTTCCGATCATATCATGAATGCAAGAGTGATGAGTACAAAGTTGAAGGTTGGTATAGAAGTTGAGAAAGGTGATGAAGATGGGTTGTTTACAAAAGAAAGTGTGTGCAAAGCTGTGAAAATTGTGATGGATGATGAGAATGAGATTGGAAGAGAAGTGAGAGCAAATCATGCAAAAATGAGAAACTTCCTCCTTAGCAACAATTTAGAATCATCATGTGTCGATAGTTTCTGTCAGAAACTTTATCATTTGCTCTAG

Protein sequence

>MS.gene69835.t1

MDAPSPLHIAMFPWFAMGHLTPYLHFSNKLALRGHKISFFIPKNTLNKLQHLNLHPNLITFVPITVPHVNGLPHDAETSSDVPFSLFPLIATAMDQTDKQIELLLKELKPKIVFFDFQYWLPNLTQKLGIKSLQYLIWNPISSAYLGNIPRKSQGTYLTKDDLKKPPAGFPDSSIKFHSHELRFLASTRKIEFGSGVLLYDRVDIGTKFSDAVAFKGCREIDGLYADYLQTVFGKPVLLSGPLLPEAPKATLEEKWLTWLKGFKHGSVVFCAYGSEGPLEQNQFQELLLGLELTGFPFLAALKPPIGFESIEEALPEGFNERVNGKGIVYGSWIQQQLILEHPSVGCFITHCGAASITEGLVNTCQLVLLPRLGSDHIMNARVMSTKLKVGIEVEKGDEDGLFTKESVCKAVKIVMDDENEIGREVRANHAKMRNFLLSNNLESSCVDSFCQKLYHLL