AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene073188


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene073188.t1 MTR_2g083430 97.380 458 12 0 1 458 1 458 0.0 914
MS.gene073188.t1 MTR_2g083480 78.556 457 98 0 1 457 1 457 0.0 727
MS.gene073188.t1 MTR_2g083390 73.581 458 97 1 1 458 1 434 0.0 695
MS.gene073188.t1 MTR_2g083420 73.581 458 97 1 1 458 1 434 0.0 690
MS.gene073188.t1 MTR_2g083380 69.432 458 140 0 1 458 18 475 0.0 642
MS.gene073188.t1 MTR_2g083490 68.996 458 142 0 1 458 1 458 0.0 639
MS.gene073188.t1 MTR_4g079250 60.000 460 180 3 1 458 1 458 0.0 580
MS.gene073188.t1 MTR_4g079270 59.348 460 183 3 1 458 1 458 0.0 573
MS.gene073188.t1 MTR_2g014900 56.319 451 196 1 8 458 7 456 0.0 531
MS.gene073188.t1 MTR_2g083360 59.161 453 80 4 6 458 27 374 6.74e-174 492
MS.gene073188.t1 MTR_2g086283 53.468 447 96 7 11 457 1 335 2.44e-147 424
MS.gene073188.t1 MTR_1g090270 41.126 462 250 11 7 457 14 464 6.91e-113 340
MS.gene073188.t1 MTR_4g059370 40.896 335 179 8 132 457 67 391 1.42e-79 252
MS.gene073188.t1 MTR_8g068330 32.548 467 287 14 7 456 7 462 1.21e-70 231
MS.gene073188.t1 MTR_4g123553 32.981 473 275 16 2 455 9 458 1.55e-68 226
MS.gene073188.t1 MTR_8g068360 31.847 471 288 16 7 458 11 467 1.70e-66 221
MS.gene073188.t1 MTR_7g067330 32.826 460 257 14 7 455 8 426 1.02e-65 218
MS.gene073188.t1 MTR_2g008226 34.038 473 278 18 6 456 8 468 4.05e-65 217
MS.gene073188.t1 MTR_7g067120 32.538 461 257 15 7 455 8 426 1.63e-64 214
MS.gene073188.t1 MTR_2g008225 32.035 462 289 13 6 454 13 462 3.32e-64 214
MS.gene073188.t1 MTR_8g068340 30.901 466 294 13 7 455 11 465 2.23e-63 212
MS.gene073188.t1 MTR_2g008220 32.104 461 290 13 6 454 12 461 1.91e-62 210
MS.gene073188.t1 MTR_2g014930 42.268 291 86 7 17 306 9 218 1.20e-61 200
MS.gene073188.t1 MTR_6g036650 31.092 476 279 16 6 455 16 468 1.36e-59 202
MS.gene073188.t1 MTR_6g042310 32.181 463 282 16 7 455 17 461 3.52e-59 201
MS.gene073188.t1 MTR_2g046620 30.621 467 294 15 2 455 10 459 1.18e-55 192
MS.gene073188.t1 MTR_4g079280 41.667 228 88 2 11 238 1 183 2.49e-54 180
MS.gene073188.t1 MTR_2g083440 83.333 102 17 0 357 458 11 112 1.29e-52 172
MS.gene073188.t1 MTR_8g007565 31.222 442 280 11 7 432 6 439 5.23e-50 177
MS.gene073188.t1 MTR_8g007650 31.448 442 279 11 7 432 6 439 5.39e-50 177
MS.gene073188.t1 MTR_1g090280 42.788 208 107 5 261 457 108 314 5.00e-48 167
MS.gene073188.t1 MTR_5g066410 28.764 445 264 11 11 432 1 415 2.47e-46 166
MS.gene073188.t1 MTR_4g077960 29.590 463 274 18 17 455 1 435 4.79e-46 166
MS.gene073188.t1 MTR_8g009055 28.145 469 267 16 7 435 5 443 5.61e-34 133
MS.gene073188.t1 MTR_8g066610 26.403 481 318 14 6 457 7 480 1.05e-33 132
MS.gene073188.t1 MTR_8g071070 28.151 476 305 13 8 457 7 471 2.61e-33 131
MS.gene073188.t1 MTR_8g009050 27.660 470 268 16 7 435 5 443 3.54e-33 130
MS.gene073188.t1 MTR_5g087620 25.988 481 295 16 8 443 10 474 6.59e-33 130
MS.gene073188.t1 MTR_7g117170 28.233 464 281 17 3 435 10 452 9.19e-32 127
MS.gene073188.t1 MTR_6g023665 26.577 444 296 10 9 433 14 446 8.45e-31 124
MS.gene073188.t1 MTR_8g027885 27.586 493 273 17 4 452 15 467 1.27e-30 124
MS.gene073188.t1 MTR_8g027870 27.383 493 274 16 4 452 15 467 1.49e-30 123
MS.gene073188.t1 MTR_6g033615 28.412 447 262 17 9 428 5 420 1.56e-30 123
MS.gene073188.t1 MTR_8g008990 27.754 472 267 18 7 435 5 445 1.64e-30 123
MS.gene073188.t1 MTR_4g031800 25.963 493 290 16 6 454 7 468 1.70e-30 123
MS.gene073188.t1 MTR_3g435310 36.816 201 120 5 255 455 224 417 7.48e-30 120
MS.gene073188.t1 MTR_3g435310 33.557 149 93 5 6 151 16 161 1.66e-17 84.7
MS.gene073188.t1 MTR_7g013220 25.799 438 289 14 8 427 5 424 1.21e-29 120
MS.gene073188.t1 MTR_7g070660 25.105 474 304 16 7 444 10 468 1.42e-29 121
MS.gene073188.t1 MTR_8g009073 28.078 463 273 17 7 435 5 441 1.79e-29 120
MS.gene073188.t1 MTR_6g033625 27.253 455 271 17 9 428 5 434 3.87e-29 119
MS.gene073188.t1 MTR_0009s0240 24.678 466 324 15 8 457 7 461 6.45e-29 119
MS.gene073188.t1 MTR_6g488280 25.901 444 299 10 9 433 7 439 8.36e-29 118
MS.gene073188.t1 MTR_0428s0010 25.901 444 299 10 9 433 7 439 8.36e-29 118
MS.gene073188.t1 MTR_2g098430 24.086 465 298 14 9 437 7 452 1.01e-28 118
MS.gene073188.t1 MTR_8g009063 26.752 471 270 17 7 436 12 448 1.79e-28 117
MS.gene073188.t1 MTR_4g117980 25.895 475 278 17 6 433 9 456 1.93e-28 117
MS.gene073188.t1 MTR_4g024020 27.312 465 294 18 5 433 6 462 3.00e-28 117
MS.gene073188.t1 MTR_0184s0040 25.316 474 275 16 7 436 20 458 5.87e-28 116
MS.gene073188.t1 MTR_0078s0190 25.316 474 275 16 7 436 20 458 5.87e-28 116
MS.gene073188.t1 MTR_7g070740 24.468 470 291 14 7 433 10 458 6.89e-28 116
MS.gene073188.t1 MTR_8g465670 26.964 471 267 17 9 434 8 446 1.05e-27 115
MS.gene073188.t1 MTR_1g062380 25.110 454 290 16 4 418 12 454 1.86e-27 115
MS.gene073188.t1 MTR_7g102560 26.737 475 280 16 5 433 6 458 1.98e-27 114
MS.gene073188.t1 MTR_0078s0060 25.054 467 284 15 7 436 5 442 2.07e-27 114
MS.gene073188.t1 MTR_8g006270 25.061 411 247 12 53 434 61 439 2.86e-27 114
MS.gene073188.t1 MTR_4g485590 27.737 411 235 14 8 394 9 381 2.86e-27 113
MS.gene073188.t1 MTR_7g013180 26.498 434 272 17 8 419 5 413 2.89e-27 114
MS.gene073188.t1 MTR_7g013200 26.742 445 265 18 8 427 5 413 4.18e-27 113
MS.gene073188.t1 MTR_8g006730 23.991 446 309 11 8 433 6 441 5.96e-27 113
MS.gene073188.t1 MTR_6g033725 28.829 444 277 17 9 429 5 432 6.96e-27 113
MS.gene073188.t1 MTR_0184s0030 31.679 262 143 7 196 425 180 437 8.14e-27 112
MS.gene073188.t1 MTR_5g045970 27.101 476 290 19 3 435 11 472 8.89e-27 113
MS.gene073188.t1 MTR_8g009067 26.907 472 267 17 7 435 5 441 1.73e-26 112
MS.gene073188.t1 MTR_7g055710 24.406 463 300 15 7 433 10 458 2.48e-26 111
MS.gene073188.t1 MTR_7g047030 24.307 469 282 15 8 435 6 442 2.58e-26 111
MS.gene073188.t1 MTR_7g047270 24.307 469 282 15 8 435 6 442 2.58e-26 111
MS.gene073188.t1 MTR_8g009073 32.677 254 149 9 198 435 65 312 7.40e-26 108
MS.gene073188.t1 MTR_7g070610 24.307 469 294 16 7 433 12 461 9.48e-26 110
MS.gene073188.t1 MTR_0078s0010 24.891 458 293 12 8 435 6 442 1.12e-25 109
MS.gene073188.t1 MTR_8g009067 35.407 209 116 7 241 435 120 323 1.19e-25 107
MS.gene073188.t1 MTR_7g102460 25.887 479 286 20 5 436 6 462 1.68e-25 109
MS.gene073188.t1 MTR_8g006220 26.305 479 268 15 9 434 7 453 3.39e-25 108
MS.gene073188.t1 MTR_7g102490 27.097 465 294 19 5 433 6 461 3.48e-25 108
MS.gene073188.t1 MTR_5g035580 26.696 457 295 15 7 448 12 443 4.52e-25 107
MS.gene073188.t1 MTR_6g005600 28.955 335 199 9 124 436 125 442 4.85e-25 107
MS.gene073188.t1 MTR_7g070800 24.731 465 293 15 7 433 5 450 7.10e-25 107
MS.gene073188.t1 MTR_4g485620 24.379 443 298 12 20 436 1 432 7.82e-25 107
MS.gene073188.t1 MTR_5g035560 26.682 446 285 16 7 436 10 429 9.75e-25 107
MS.gene073188.t1 MTR_8g006260 32.877 219 129 8 231 436 234 447 9.87e-25 107
MS.gene073188.t1 MTR_6g038200 26.932 453 262 20 8 429 11 425 1.07e-24 106
MS.gene073188.t1 MTR_2g046820 36.842 209 117 6 259 457 259 462 1.12e-24 106
MS.gene073188.t1 MTR_8g006710 23.490 447 307 12 9 433 7 440 1.16e-24 106
MS.gene073188.t1 MTR_8g012730 33.484 221 128 5 228 434 69 284 1.97e-24 103
MS.gene073188.t1 MTR_4g128720 26.897 435 279 17 7 425 14 425 2.30e-24 105
MS.gene073188.t1 MTR_8g012635 34.737 190 106 4 259 434 262 447 2.42e-24 105
MS.gene073188.t1 MTR_6g038230 27.505 469 271 21 8 448 11 438 2.43e-24 105
MS.gene073188.t1 MTR_7g071040 23.276 464 305 13 7 433 16 465 3.04e-24 105
MS.gene073188.t1 MTR_8g466240 26.118 425 261 17 1 398 1 399 3.27e-24 105
MS.gene073188.t1 MTR_1g019520 34.392 189 109 4 258 435 5 189 4.60e-24 100
MS.gene073188.t1 MTR_8g074550 24.324 481 290 19 6 434 6 464 6.14e-24 104
MS.gene073188.t1 MTR_6g038220 26.350 463 283 18 8 448 11 437 6.91e-24 103
MS.gene073188.t1 MTR_8g083280 25.155 485 296 16 8 448 7 468 7.94e-24 103
MS.gene073188.t1 MTR_2g034990 26.237 465 289 20 6 438 9 451 1.81e-23 103
MS.gene073188.t1 MTR_1g019510 25.764 458 289 16 7 435 5 440 2.34e-23 102
MS.gene073188.t1 MTR_3g009510 34.595 185 105 3 258 429 266 447 2.40e-23 102
MS.gene073188.t1 MTR_7g070910 23.441 465 303 14 7 433 10 459 3.03e-23 102
MS.gene073188.t1 MTR_6g033660 27.891 441 285 16 9 428 5 433 3.58e-23 102
MS.gene073188.t1 MTR_7g117405 25.163 461 299 16 8 436 12 458 3.63e-23 102
MS.gene073188.t1 MTR_8g088560 25.358 489 286 21 7 455 9 458 3.78e-23 102
MS.gene073188.t1 MTR_7g046490 32.090 268 144 10 183 434 194 439 3.80e-23 102
MS.gene073188.t1 MTR_8g012650 33.684 190 108 4 259 434 262 447 3.99e-23 102
MS.gene073188.t1 MTR_7g071050 24.889 450 268 17 7 433 12 414 5.16e-23 101
MS.gene073188.t1 MTR_4g485630 25.870 460 296 17 7 435 8 453 7.13e-23 101
MS.gene073188.t1 MTR_7g070810 24.889 450 302 12 7 428 8 449 1.02e-22 100
MS.gene073188.t1 MTR_2g046750 35.407 209 120 6 259 457 262 465 1.07e-22 100
MS.gene073188.t1 MTR_6g033675 24.429 438 307 12 9 429 5 435 1.37e-22 100
MS.gene073188.t1 MTR_5g067170 25.966 466 287 19 6 433 9 454 1.54e-22 100
MS.gene073188.t1 MTR_7g070930 23.605 466 301 15 7 433 13 462 1.54e-22 100
MS.gene073188.t1 MTR_5g019580 33.641 217 125 6 229 427 234 449 1.56e-22 100
MS.gene073188.t1 MTR_6g035185 23.126 467 302 15 6 433 9 457 1.57e-22 100
MS.gene073188.t1 MTR_8g012630 33.684 190 108 4 259 434 206 391 1.59e-22 99.8
MS.gene073188.t1 MTR_5g019580 33.641 217 125 6 229 427 258 473 1.70e-22 100
MS.gene073188.t1 MTR_2g040530 34.211 190 113 4 259 438 261 448 2.42e-22 99.8
MS.gene073188.t1 MTR_0536s0010 25.926 459 289 17 6 436 19 454 2.92e-22 99.8
MS.gene073188.t1 MTR_6g035265 24.416 471 282 16 6 433 9 448 3.05e-22 99.4
MS.gene073188.t1 MTR_7g070780 23.226 465 305 13 6 433 9 458 3.34e-22 99.4
MS.gene073188.t1 MTR_4g117950 25.435 460 289 17 6 435 4 439 3.63e-22 99.4
MS.gene073188.t1 MTR_2g059240 24.714 437 280 12 5 408 10 430 3.92e-22 99.0
MS.gene073188.t1 MTR_6g038240 33.918 171 102 6 259 429 266 425 4.02e-22 99.0
MS.gene073188.t1 MTR_8g008970 26.282 468 275 17 7 435 5 441 4.54e-22 99.8
MS.gene073188.t1 MTR_8g008970 29.044 272 161 9 168 436 521 763 6.99e-17 84.0
MS.gene073188.t1 MTR_7g070940 21.784 482 332 13 7 457 8 475 4.88e-22 99.0
MS.gene073188.t1 MTR_0536s0020 25.157 477 281 17 2 436 12 454 6.45e-22 98.6
MS.gene073188.t1 MTR_4g117890 25.301 498 302 19 2 455 7 478 6.75e-22 98.6
MS.gene073188.t1 MTR_1g107350 24.788 472 291 20 1 435 1 445 9.33e-22 98.2
MS.gene073188.t1 MTR_1g107315 25.977 435 280 12 1 408 1 420 9.64e-22 98.2
MS.gene073188.t1 MTR_7g013260 25.397 441 274 19 1 420 1 407 1.68e-21 97.1
MS.gene073188.t1 MTR_8g077590 30.705 241 148 6 208 434 207 442 1.75e-21 97.1
MS.gene073188.t1 MTR_5g045960 24.733 469 294 18 7 433 8 459 1.91e-21 97.1
MS.gene073188.t1 MTR_4g082820 27.723 404 250 15 7 384 6 393 2.90e-21 96.7
MS.gene073188.t1 MTR_7g102550 25.708 459 292 18 8 429 9 455 3.15e-21 96.7
MS.gene073188.t1 MTR_3g049970 26.327 471 286 18 1 435 1 446 4.17e-21 95.9
MS.gene073188.t1 MTR_4g117960 24.190 463 300 16 6 433 9 455 9.23e-21 95.1
MS.gene073188.t1 MTR_5g029800 24.249 466 294 19 6 428 9 458 1.45e-20 94.4
MS.gene073188.t1 MTR_2g035020 24.612 451 293 16 6 422 9 446 2.17e-20 94.0
MS.gene073188.t1 MTR_5g098960 38.596 171 88 7 259 426 262 418 3.40e-20 93.2
MS.gene073188.t1 MTR_5g090610 30.233 258 152 9 206 438 190 444 3.61e-20 93.2
MS.gene073188.t1 MTR_5g098930 21.529 497 308 14 7 454 4 467 5.01e-20 92.8
MS.gene073188.t1 MTR_8g064880 26.107 429 254 17 6 394 7 412 6.18e-20 92.4
MS.gene073188.t1 MTR_4g082810 27.845 413 240 14 7 384 6 395 6.88e-20 91.7
MS.gene073188.t1 MTR_3g479520 23.849 478 312 15 8 450 15 475 7.09e-20 92.4
MS.gene073188.t1 MTR_7g070860 23.110 463 289 14 7 433 6 437 8.43e-20 92.0
MS.gene073188.t1 MTR_3g084530 24.565 460 287 18 8 429 6 443 1.50e-19 91.3
MS.gene073188.t1 MTR_8g083290 34.302 172 106 5 259 429 269 434 1.50e-19 91.3
MS.gene073188.t1 MTR_7g013240 31.915 188 117 7 237 420 226 406 1.53e-19 90.9
MS.gene073188.t1 MTR_5g090700 28.462 260 154 8 206 438 206 460 1.72e-19 91.3
MS.gene073188.t1 MTR_4g128690 26.450 431 270 17 7 419 14 415 2.66e-19 90.5
MS.gene073188.t1 MTR_5g090620 26.336 262 159 6 206 438 203 459 2.95e-19 90.5
MS.gene073188.t1 MTR_4g485640 23.733 434 294 13 18 427 219 639 3.62e-19 90.9
MS.gene073188.t1 MTR_3g069690 31.892 185 115 6 253 435 251 426 3.81e-19 90.1
MS.gene073188.t1 MTR_5g090660 29.646 226 136 7 234 438 233 456 4.26e-19 90.5
MS.gene073188.t1 MTR_4g094920 28.713 202 135 6 259 454 281 479 5.01e-19 89.7
MS.gene073188.t1 MTR_3g079480 23.984 492 310 18 8 458 21 489 5.18e-19 89.7
MS.gene073188.t1 MTR_3g084540 24.375 480 303 19 8 449 6 463 6.29e-19 89.4
MS.gene073188.t1 MTR_8g044140 22.727 418 247 13 46 416 19 407 6.67e-19 89.4
MS.gene073188.t1 MTR_5g090630 29.680 219 131 6 241 438 233 449 8.19e-19 89.0
MS.gene073188.t1 MTR_7g470610 27.974 311 173 11 120 409 5 285 8.62e-19 87.0
MS.gene073188.t1 MTR_7g070583 27.974 311 173 11 120 409 5 285 8.62e-19 87.0
MS.gene073188.t1 MTR_8g064870 23.144 458 308 12 6 435 9 450 8.74e-19 89.0
MS.gene073188.t1 MTR_8g012745 31.604 212 123 7 239 434 239 444 9.38e-19 89.0
MS.gene073188.t1 MTR_6g038300 32.164 171 106 5 259 429 266 426 1.20e-18 88.6
MS.gene073188.t1 MTR_3g009490 35.185 162 87 4 282 429 2 159 1.21e-18 84.3
MS.gene073188.t1 MTR_5g075440 24.313 473 287 16 1 439 1 436 1.23e-18 88.6
MS.gene073188.t1 MTR_1g032490 25.459 436 269 13 7 408 9 422 1.41e-18 88.6
MS.gene073188.t1 MTR_3g479490 23.983 467 296 19 7 435 5 450 1.75e-18 88.2
MS.gene073188.t1 MTR_3g069710 33.690 187 112 6 251 435 252 428 1.95e-18 87.8
MS.gene073188.t1 MTR_5g090670 28.507 221 133 6 241 438 242 460 2.75e-18 87.4
MS.gene073188.t1 MTR_7g102450 33.871 186 107 5 264 436 267 449 3.26e-18 87.4
MS.gene073188.t1 MTR_3g084520 23.176 466 286 17 8 429 6 443 4.10e-18 87.0
MS.gene073188.t1 MTR_6g011340 24.295 461 302 16 8 435 10 456 5.76e-18 86.7
MS.gene073188.t1 MTR_7g080940 30.769 182 115 5 253 434 258 428 6.56e-18 86.3
MS.gene073188.t1 MTR_2g035040 30.526 190 116 5 258 433 174 361 6.83e-18 85.9
MS.gene073188.t1 MTR_5g027210 25.101 247 152 4 212 426 212 457 7.68e-18 86.3
MS.gene073188.t1 MTR_8g032950 23.517 472 305 18 1 435 5 457 8.30e-18 86.3
MS.gene073188.t1 MTR_4g095008 29.670 182 119 6 259 436 266 442 8.60e-18 86.3
MS.gene073188.t1 MTR_7g080935 23.840 474 309 15 7 458 10 453 1.16e-17 85.5
MS.gene073188.t1 MTR_1g107360 29.808 208 134 5 229 435 242 438 1.49e-17 85.1
MS.gene073188.t1 MTR_3g479610 30.052 193 125 5 259 450 122 305 2.78e-17 82.8
MS.gene073188.t1 MTR_5g090580 26.154 260 160 7 206 438 204 458 4.74e-17 83.6
MS.gene073188.t1 MTR_6g014270 23.028 469 300 17 8 435 7 455 5.47e-17 83.6
MS.gene073188.t1 MTR_4g008630 25.311 241 165 6 209 437 204 441 6.17e-17 83.2
MS.gene073188.t1 MTR_7g102520 31.522 184 119 3 259 436 281 463 8.34e-17 83.2
MS.gene073188.t1 MTR_7g080950 30.769 182 115 6 253 434 253 423 8.83e-17 82.8
MS.gene073188.t1 MTR_0288s0020 25.000 460 281 18 8 435 10 437 1.10e-16 82.4
MS.gene073188.t1 MTR_6g013450 23.011 465 309 13 5 429 7 462 1.39e-16 82.4
MS.gene073188.t1 MTR_3g031450 23.841 453 276 19 8 434 18 427 1.42e-16 82.4
MS.gene073188.t1 MTR_8g059425 27.600 250 153 10 199 435 220 454 1.49e-16 82.0
MS.gene073188.t1 MTR_7g012120 30.337 178 109 4 259 422 272 448 1.70e-16 82.0
MS.gene073188.t1 MTR_0891s0010 28.814 177 117 4 259 435 99 266 1.83e-16 80.1
MS.gene073188.t1 MTR_3g031400 22.876 459 271 15 8 434 18 425 1.90e-16 82.0
MS.gene073188.t1 MTR_1g107375 31.122 196 123 5 240 435 247 430 2.47e-16 81.3
MS.gene073188.t1 MTR_4g118000 24.313 473 284 18 1 432 1 440 3.16e-16 81.3
MS.gene073188.t1 MTR_6g013900 30.055 183 118 5 253 435 283 455 3.37e-16 81.3
MS.gene073188.t1 MTR_5g070040 31.579 209 122 9 236 428 240 443 4.00e-16 80.9
MS.gene073188.t1 MTR_5g058320 23.297 455 305 14 5 435 7 441 4.82e-16 80.5
MS.gene073188.t1 MTR_6g014170 30.601 183 117 5 253 435 266 438 6.48e-16 80.1
MS.gene073188.t1 MTR_6g014020 30.055 183 118 5 253 435 284 456 8.37e-16 79.7
MS.gene073188.t1 MTR_6g013990 26.582 237 150 9 212 435 229 454 1.09e-15 79.7
MS.gene073188.t1 MTR_8g056740 25.561 223 148 5 220 430 121 337 2.14e-15 78.2
MS.gene073188.t1 MTR_6g014040 24.784 464 297 17 8 435 10 457 2.64e-15 78.2
MS.gene073188.t1 MTR_4g108250 26.455 189 123 5 258 436 280 462 2.99e-15 78.2
MS.gene073188.t1 MTR_1g107365 31.361 169 105 4 240 408 286 443 3.11e-15 78.2
MS.gene073188.t1 MTR_5g004940 27.586 203 133 5 242 435 182 379 3.14e-15 77.8
MS.gene073188.t1 MTR_1g107380 32.022 178 111 7 259 434 279 448 3.80e-15 77.8
MS.gene073188.t1 MTR_6g013920 27.273 242 146 9 210 435 228 455 3.99e-15 77.8
MS.gene073188.t1 MTR_1g029540 20.667 450 302 14 13 437 19 438 4.92e-15 77.4
MS.gene073188.t1 MTR_7g011470 27.823 248 153 9 203 435 206 442 5.02e-15 77.4
MS.gene073188.t1 MTR_7g011470 27.823 248 153 9 203 435 202 438 5.23e-15 77.4
MS.gene073188.t1 MTR_6g014200 28.279 244 150 9 206 435 221 453 6.02e-15 77.4
MS.gene073188.t1 MTR_5g072840 22.348 443 300 12 8 434 10 424 6.19e-15 77.0
MS.gene073188.t1 MTR_7g070870 23.325 403 283 11 7 394 18 409 6.75e-15 77.0
MS.gene073188.t1 MTR_6g014220 29.508 183 119 5 253 435 282 454 1.34e-14 76.3
MS.gene073188.t1 MTR_1g107285 23.941 472 280 17 6 435 6 440 1.56e-14 75.9
MS.gene073188.t1 MTR_5g464810 23.974 463 298 20 8 436 12 454 1.89e-14 75.9
MS.gene073188.t1 MTR_5g064240 23.974 463 298 20 8 436 12 454 1.89e-14 75.9
MS.gene073188.t1 MTR_5g016480 21.674 466 313 18 1 434 1 446 2.75e-14 75.1
MS.gene073188.t1 MTR_6g014190 28.351 194 129 5 253 446 91 274 3.95e-14 73.2
MS.gene073188.t1 MTR_3g008010 29.213 178 114 6 259 435 288 454 4.52e-14 74.7
MS.gene073188.t1 MTR_6g014310 27.381 252 147 10 201 435 225 457 4.64e-14 74.3
MS.gene073188.t1 MTR_8g007585 28.962 183 120 5 253 435 196 368 5.16e-14 73.9
MS.gene073188.t1 MTR_6g014250 27.717 184 123 5 253 436 282 455 5.70e-14 74.3
MS.gene073188.t1 MTR_6g014050 27.016 248 153 9 201 435 225 457 9.55e-14 73.6
MS.gene073188.t1 MTR_8g009840 31.875 160 93 3 274 419 333 490 1.07e-13 73.6
MS.gene073188.t1 MTR_1g040310 22.059 476 291 19 7 433 14 458 1.09e-13 73.6
MS.gene073188.t1 MTR_5g464760 23.542 463 302 17 8 436 12 456 4.88e-13 71.2
MS.gene073188.t1 MTR_6g013960 21.915 470 324 14 8 446 10 467 6.00e-13 70.9
MS.gene073188.t1 MTR_7g080900 27.126 247 152 9 196 429 195 426 7.79e-13 70.5
MS.gene073188.t1 MTR_5g040030 22.560 461 312 17 7 433 13 462 8.53e-13 70.5
MS.gene073188.t1 MTR_6g014187 22.796 465 304 18 8 435 10 456 1.17e-12 70.1
MS.gene073188.t1 MTR_7g039550 28.000 200 122 7 259 447 57 245 2.07e-12 67.8
MS.gene073188.t1 MTR_2086s0010 28.025 157 104 4 279 435 1 148 2.52e-12 65.5
MS.gene073188.t1 MTR_1996s0010 28.025 157 104 4 279 435 1 148 2.52e-12 65.5
MS.gene073188.t1 MTR_6g014240 26.923 182 123 5 253 434 251 422 2.79e-12 68.9
MS.gene073188.t1 MTR_4g094220 28.492 179 117 6 258 435 287 455 3.40e-12 68.6
MS.gene073188.t1 MTR_4g064987 24.431 483 289 22 8 458 8 446 4.60e-12 68.2
MS.gene073188.t1 MTR_6g014150 28.022 182 121 5 253 434 281 452 6.92e-12 67.8
MS.gene073188.t1 MTR_4g064987 29.808 208 121 8 258 458 251 440 1.56e-11 66.6
MS.gene073188.t1 MTR_5g031860 29.655 145 96 4 252 395 275 414 2.22e-11 66.2
MS.gene073188.t1 MTR_6g014290 25.683 183 126 5 253 435 282 454 3.11e-11 65.9
MS.gene073188.t1 MTR_0536s0030 30.370 135 82 4 309 433 194 326 8.13e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene073188.t1 AT5G53990 46.827 457 218 9 7 458 5 441 4.49e-145 422
MS.gene073188.t1 AT5G54010 45.455 462 233 7 1 458 1 447 7.36e-145 422
MS.gene073188.t1 AT1G64920 45.098 459 227 8 7 458 5 445 1.65e-141 413
MS.gene073188.t1 AT4G27570 43.290 462 243 7 1 458 1 447 2.36e-140 410
MS.gene073188.t1 AT1G64910 45.495 455 227 7 7 458 5 441 5.45e-140 409
MS.gene073188.t1 AT4G27560 43.290 462 243 7 1 458 1 447 2.25e-139 408
MS.gene073188.t1 AT4G09500 44.812 453 231 8 5 455 3 438 2.84e-139 407
MS.gene073188.t1 AT2G22930 45.614 456 223 8 5 455 3 438 4.73e-139 406
MS.gene073188.t1 AT3G29630 43.384 461 241 6 1 458 1 444 1.59e-137 403
MS.gene073188.t1 AT5G54060 44.760 458 244 7 7 458 12 466 2.36e-135 398
MS.gene073188.t1 AT3G29630 43.231 458 220 7 1 458 1 418 5.84e-133 390
MS.gene073188.t1 AT4G09500 43.016 451 217 8 5 455 3 413 2.46e-129 381
MS.gene073188.t1 AT1G50580 42.795 458 240 7 1 455 1 439 1.30e-128 380
MS.gene073188.t1 AT5G65550 30.867 473 293 17 5 458 6 463 3.18e-65 217
MS.gene073188.t1 AT5G49690 31.707 451 277 15 7 443 9 442 9.08e-63 211
MS.gene073188.t1 AT2G22590 32.043 465 287 15 7 454 14 466 1.35e-62 210
MS.gene073188.t1 AT2G22930 41.441 222 108 5 5 222 3 206 1.99e-51 176
MS.gene073188.t1 AT2G22930 37.500 96 56 2 363 455 192 286 3.61e-13 70.5
MS.gene073188.t1 AT5G03490 27.416 445 285 12 6 435 17 438 8.47e-37 141
MS.gene073188.t1 AT1G51210 28.352 455 266 15 2 433 15 432 1.13e-36 140
MS.gene073188.t1 AT2G15490 26.611 481 315 14 7 456 6 479 5.02e-36 139
MS.gene073188.t1 AT2G15490 27.066 484 312 16 7 456 6 482 3.11e-35 137
MS.gene073188.t1 AT2G15480 26.501 483 313 16 7 456 9 482 1.84e-34 135
MS.gene073188.t1 AT2G15480 26.316 494 310 17 7 456 9 492 5.50e-34 133
MS.gene073188.t1 AT4G34138 28.511 470 267 18 7 433 10 453 2.80e-31 125
MS.gene073188.t1 AT5G12890 26.623 462 296 18 7 437 9 458 7.23e-31 124
MS.gene073188.t1 AT4G34131 26.115 471 301 16 1 435 1 460 2.58e-30 123
MS.gene073188.t1 AT4G34135 25.850 441 287 12 7 416 10 441 3.05e-30 122
MS.gene073188.t1 AT2G16890 27.115 461 279 18 8 436 9 444 6.22e-30 122
MS.gene073188.t1 AT4G36770 37.946 224 117 8 227 435 224 440 1.37e-29 120
MS.gene073188.t1 AT2G36750 26.724 464 293 16 5 433 7 458 1.70e-29 120
MS.gene073188.t1 AT2G36800 26.134 463 297 18 6 433 10 462 2.22e-28 117
MS.gene073188.t1 AT2G36780 26.134 463 298 18 5 433 11 463 6.89e-28 116
MS.gene073188.t1 AT1G05675 26.991 452 276 18 8 434 6 428 7.35e-28 115
MS.gene073188.t1 AT2G36770 26.030 461 295 19 5 428 11 462 2.26e-27 114
MS.gene073188.t1 AT3G53150 25.966 466 295 15 7 428 21 480 2.60e-27 114
MS.gene073188.t1 AT1G73880 25.647 425 257 13 8 399 14 412 2.62e-27 114
MS.gene073188.t1 AT3G50740 25.652 460 293 14 8 435 7 449 3.48e-27 114
MS.gene073188.t1 AT2G31750 25.486 463 287 17 1 436 1 432 8.91e-27 112
MS.gene073188.t1 AT2G18570 34.783 184 111 2 259 434 260 442 1.24e-26 112
MS.gene073188.t1 AT2G31750 25.486 463 287 17 1 436 1 432 1.70e-26 112
MS.gene073188.t1 AT5G14860 25.641 468 286 17 8 436 8 452 1.85e-26 112
MS.gene073188.t1 AT1G01420 25.482 467 278 16 8 435 11 446 2.58e-26 111
MS.gene073188.t1 AT1G01420 25.482 467 278 16 8 435 8 443 2.60e-26 111
MS.gene073188.t1 AT2G31790 26.464 461 269 21 8 434 8 432 5.20e-26 110
MS.gene073188.t1 AT2G16890 26.545 437 266 17 8 412 9 422 5.73e-26 109
MS.gene073188.t1 AT2G30150 25.455 440 289 14 8 433 13 427 8.29e-26 109
MS.gene073188.t1 AT4G01070 26.078 464 280 17 8 435 8 444 9.24e-26 110
MS.gene073188.t1 AT2G36760 25.431 464 302 15 4 433 10 463 1.08e-25 109
MS.gene073188.t1 AT1G10400 25.826 484 300 19 4 451 3 463 1.93e-25 108
MS.gene073188.t1 AT2G30140 25.114 438 292 13 8 433 13 426 3.71e-25 107
MS.gene073188.t1 AT2G30140 25.850 441 284 16 8 433 13 425 5.91e-25 107
MS.gene073188.t1 AT2G18560 30.500 200 125 3 243 434 159 352 6.43e-25 106
MS.gene073188.t1 AT2G30150 25.517 435 285 14 13 433 2 411 1.64e-24 105
MS.gene073188.t1 AT2G43820 24.795 488 282 18 8 456 7 448 5.88e-24 104
MS.gene073188.t1 AT2G36970 23.503 451 313 14 8 437 10 449 2.95e-23 102
MS.gene073188.t1 AT1G05680 25.221 452 284 18 8 434 6 428 5.67e-23 101
MS.gene073188.t1 AT4G15550 26.000 450 284 17 5 424 12 442 1.32e-22 100
MS.gene073188.t1 AT1G01390 25.523 478 287 18 8 444 8 457 2.67e-22 99.8
MS.gene073188.t1 AT1G01390 25.523 478 287 18 8 444 25 474 3.13e-22 99.8
MS.gene073188.t1 AT3G21560 24.222 450 311 13 1 429 3 443 5.12e-22 99.0
MS.gene073188.t1 AT4G15480 23.195 457 294 16 6 429 17 449 6.42e-22 98.6
MS.gene073188.t1 AT2G29730 26.233 446 285 16 7 425 4 432 6.89e-22 98.2
MS.gene073188.t1 AT3G53160 25.586 469 301 19 1 433 1 457 8.55e-22 98.2
MS.gene073188.t1 AT5G59590 26.304 460 279 22 8 445 10 431 2.46e-21 96.7
MS.gene073188.t1 AT2G43840 24.638 483 287 17 8 455 7 447 3.53e-21 96.3
MS.gene073188.t1 AT2G43840 24.638 483 287 17 8 455 7 447 5.12e-21 95.5
MS.gene073188.t1 AT5G59580 26.013 469 297 19 8 455 9 448 5.50e-21 95.5
MS.gene073188.t1 AT1G05530 23.918 485 292 19 5 452 4 448 1.33e-20 94.4
MS.gene073188.t1 AT3G21760 31.658 199 116 6 248 428 258 454 1.91e-20 94.4
MS.gene073188.t1 AT5G26310 29.487 234 143 5 216 434 215 441 1.96e-20 94.0
MS.gene073188.t1 AT1G07250 29.500 200 135 4 259 454 275 472 2.46e-20 94.0
MS.gene073188.t1 AT4G15500 24.835 455 301 18 2 435 5 439 4.22e-20 93.2
MS.gene073188.t1 AT4G15280 30.325 277 160 9 208 454 232 505 5.90e-20 92.8
MS.gene073188.t1 AT4G15280 30.325 277 160 9 208 454 200 473 7.63e-20 92.4
MS.gene073188.t1 AT5G66690 29.915 234 142 6 216 434 215 441 7.73e-20 92.4
MS.gene073188.t1 AT3G21790 29.412 255 155 7 223 454 226 478 8.69e-20 92.4
MS.gene073188.t1 AT1G05560 23.493 481 300 17 4 452 1 445 1.23e-19 91.7
MS.gene073188.t1 AT1G07240 29.078 282 179 8 190 456 202 477 2.36e-19 90.9
MS.gene073188.t1 AT4G15490 22.940 449 300 14 8 429 8 437 2.75e-19 90.5
MS.gene073188.t1 AT1G05560 23.701 481 299 17 4 452 51 495 2.77e-19 90.9
MS.gene073188.t1 AT1G24100 23.395 483 299 16 8 454 11 458 3.27e-19 90.1
MS.gene073188.t1 AT4G15260 29.108 213 132 5 259 454 144 354 3.30e-19 89.4
MS.gene073188.t1 AT3G21800 31.551 187 109 4 259 428 265 449 6.49e-19 89.4
MS.gene073188.t1 AT1G22360 23.542 463 302 17 8 436 10 454 1.12e-18 89.0
MS.gene073188.t1 AT3G46670 25.056 447 291 17 16 448 17 433 1.19e-18 88.6
MS.gene073188.t1 AT2G29710 32.620 187 112 6 245 425 254 432 1.36e-18 88.6
MS.gene073188.t1 AT5G38040 25.546 458 296 15 16 454 18 449 2.01e-18 87.8
MS.gene073188.t1 AT3G16520 33.333 165 104 3 258 418 262 424 4.47e-18 86.7
MS.gene073188.t1 AT1G06000 23.245 413 243 12 8 394 10 374 4.98e-18 86.7
MS.gene073188.t1 AT3G16520 33.333 165 104 3 258 418 262 424 5.09e-18 86.7
MS.gene073188.t1 AT3G22250 34.270 178 91 8 259 428 276 435 5.19e-18 86.7
MS.gene073188.t1 AT3G46660 32.701 211 121 9 241 445 242 437 5.60e-18 86.7
MS.gene073188.t1 AT3G16520 33.333 165 104 3 258 418 262 424 5.88e-18 86.3
MS.gene073188.t1 AT3G21750 26.531 245 158 5 230 454 226 468 6.26e-18 86.3
MS.gene073188.t1 AT5G05870 27.376 263 173 8 206 458 204 458 8.13e-18 85.9
MS.gene073188.t1 AT2G29740 31.122 196 125 6 241 428 255 448 9.04e-18 85.9
MS.gene073188.t1 AT1G07260 28.319 226 150 6 241 456 250 473 1.76e-17 85.1
MS.gene073188.t1 AT3G21780 31.937 191 108 6 259 433 259 443 2.06e-17 84.7
MS.gene073188.t1 AT2G23250 30.055 183 120 5 252 434 237 411 3.07e-17 84.0
MS.gene073188.t1 AT3G55700 31.343 201 128 6 247 445 248 440 5.16e-17 83.6
MS.gene073188.t1 AT3G11340 31.609 174 107 6 258 429 252 415 6.06e-17 83.2
MS.gene073188.t1 AT5G05890 28.279 244 157 8 201 429 198 438 1.02e-16 82.8
MS.gene073188.t1 AT2G29750 31.892 185 116 6 241 417 255 437 2.14e-16 81.6
MS.gene073188.t1 AT1G22360 23.110 463 292 18 8 436 10 442 6.97e-16 80.1
MS.gene073188.t1 AT2G23260 28.415 183 123 5 253 435 256 430 7.40e-16 80.1
MS.gene073188.t1 AT4G14090 30.137 219 131 10 241 448 238 445 8.17e-16 79.7
MS.gene073188.t1 AT3G55710 35.000 140 86 4 259 396 263 399 8.20e-16 79.7
MS.gene073188.t1 AT1G78270 30.000 180 113 6 259 436 289 457 4.92e-15 77.8
MS.gene073188.t1 AT5G17030 23.291 468 303 21 8 450 12 448 5.30e-15 77.4
MS.gene073188.t1 AT2G36790 33.514 185 111 5 259 433 280 462 5.47e-15 77.4
MS.gene073188.t1 AT1G22380 22.052 458 315 15 8 436 13 457 7.33e-15 77.0
MS.gene073188.t1 AT1G22400 30.769 195 121 7 259 450 291 474 2.50e-14 75.5
MS.gene073188.t1 AT2G26480 29.245 212 127 9 239 447 238 429 1.17e-13 73.2
MS.gene073188.t1 AT5G17050 21.319 455 300 17 8 436 12 434 1.20e-13 73.2
MS.gene073188.t1 AT3G02100 22.432 477 302 18 8 450 13 455 1.34e-13 73.2
MS.gene073188.t1 AT5G17040 26.289 194 129 6 258 450 252 432 1.73e-12 69.3
MS.gene073188.t1 AT5G17040 26.289 194 129 6 258 450 150 330 2.94e-12 68.2
MS.gene073188.t1 AT5G38010 25.328 458 290 18 8 445 10 435 3.82e-12 68.6
MS.gene073188.t1 AT3G46720 28.351 194 117 6 253 445 250 422 7.31e-12 67.4
MS.gene073188.t1 AT1G22340 26.257 179 123 4 258 436 289 458 8.06e-12 67.4

Find 87 sgRNAs with CRISPR-Local

Find 114 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAGGAAAAGGGATTGTTTA+TGG 0.197222 2.3:-14254301 MS.gene073188:CDS
GGAAAACCTTATCTACTTTC+AGG 0.218620 2.3:-14254571 MS.gene073188:CDS
GTATCAAAAGTCTTCAATAT+TGG 0.261714 2.3:-14254885 MS.gene073188:CDS
GAACCATATGCTGAATTTCT+TGG 0.266462 2.3:-14254604 MS.gene073188:CDS
ATCCTTTCATTGAACCCTTC+TGG 0.290366 2.3:+14254325 None:intergenic
GATCTCAAGCACCCACCTTC+AGG 0.295653 2.3:-14254787 MS.gene073188:CDS
TTGCTTGGTCTTGAGTTAAC+AGG 0.300933 2.3:-14254409 MS.gene073188:CDS
AGGTGATGAGGTTTGGGTTA+AGG 0.305801 2.3:+14255112 None:intergenic
GGGACAAAGGTGATGAGGTT+TGG 0.323609 2.3:+14255105 None:intergenic
TTGTTGGAGAGGTGAAGATA+TGG 0.326912 2.3:+14255207 None:intergenic
CATATTGATGGTCTTCCCTT+TGG 0.332617 2.3:-14255069 MS.gene073188:CDS
AAGGGATTGTTTATGGAAGT+TGG 0.335805 2.3:-14254294 MS.gene073188:CDS
TTTCCAAGAAATTCAGCATA+TGG 0.343543 2.3:+14254601 None:intergenic
GTTAACGAGTGCCTCGGTTA+TGG 0.344448 2.3:+14254204 None:intergenic
GGACAAAGGTGATGAGGTTT+GGG 0.351514 2.3:+14255106 None:intergenic
CTCAATGTTCCTCATATTGA+TGG 0.355741 2.3:-14255081 MS.gene073188:CDS
GGGTTCAATGAAAGGATTAA+AGG 0.361758 2.3:-14254319 MS.gene073188:CDS
TCAATAGATTCAAATCCATT+AGG 0.363401 2.3:+14254358 None:intergenic
TGTTGGAGAGGTGAAGATAT+GGG 0.366037 2.3:+14255208 None:intergenic
ACAAATTGAACTTCTTCTTA+AGG 0.376446 2.3:-14254974 MS.gene073188:CDS
GGCTTTAGTGCTGCAAGAAA+TGG 0.379160 2.3:+14254382 None:intergenic
ATGAAAGGATTAAAGGAAAA+GGG 0.406889 2.3:-14254312 MS.gene073188:CDS
TAAAGCTTGATGGATGAATC+AGG 0.414411 2.3:+14254760 None:intergenic
TTCATGTTGATAAAGCTTGA+TGG 0.415216 2.3:+14254750 None:intergenic
CAGTTTCAAGAGTTGTTGCT+TGG 0.416604 2.3:-14254424 MS.gene073188:CDS
AAAATGGGAATCATGGCTTA+AGG 0.418141 2.3:-14254509 MS.gene073188:CDS
AATGAAAGGATTAAAGGAAA+AGG 0.426984 2.3:-14254313 MS.gene073188:CDS
AATAAGAGGGACTAAAGAAA+AGG 0.434353 2.3:+14255023 None:intergenic
TCCATTGCTGTAGCAATAAG+AGG 0.436011 2.3:+14255009 None:intergenic
AATCAAAGAAAACTATTTGT+GGG 0.437422 2.3:+14254944 None:intergenic
ATGGATGATGAGAATGAAGT+TGG 0.453273 2.3:-14254025 MS.gene073188:CDS
GTTGAGAAAGGTGATGAAGA+TGG 0.456125 2.3:-14254091 MS.gene073188:CDS
AATGTTTCCATGGTTTGCTA+TGG 0.456397 2.3:-14255241 MS.gene073188:CDS
GCAGCACTAAAGCCACCTAA+TGG 0.459950 2.3:-14254373 MS.gene073188:CDS
TACCAGAAGGGTTCAATGAA+AGG 0.468184 2.3:-14254327 MS.gene073188:CDS
ATTCTAGAACACCCTTCTGT+TGG 0.469353 2.3:-14254256 MS.gene073188:CDS
AAATCAAAGAAAACTATTTG+TGG 0.469794 2.3:+14254943 None:intergenic
ACAAGTTTAGCTGATGCAAT+TGG 0.470591 2.3:-14254652 MS.gene073188:CDS
TCATCGAGGAAACTTGTCTT+CGG 0.476363 2.3:-14254712 MS.gene073188:CDS
AAATGGGAATCATGGCTTAA+GGG 0.478566 2.3:-14254508 MS.gene073188:CDS
TTGAAGAAGCTTTACCAGAA+GGG 0.488852 2.3:-14254339 MS.gene073188:CDS
ATCTCAAGCACCCACCTTCA+GGG 0.489003 2.3:-14254786 MS.gene073188:CDS
AGGAAACTTGTCTTCGGAAG+TGG 0.494113 2.3:-14254706 MS.gene073188:CDS
TTCACATAGCAATGTTTCCA+TGG 0.496374 2.3:-14255251 MS.gene073188:CDS
GTTGGAGAGGTGAAGATATG+GGG 0.500001 2.3:+14255209 None:intergenic
ATGTTTCCATGGTTTGCTAT+GGG 0.504571 2.3:-14255240 MS.gene073188:CDS
GCTGATGCAATTGGTTTCAA+AGG 0.508787 2.3:-14254643 MS.gene073188:CDS
AAGGTTGAGATGTTGTAACT+TGG 0.511625 2.3:+14255131 None:intergenic
CCAAGACATAGCCAAGGAAA+AGG 0.512525 2.3:-14254823 MS.gene073188:CDS
CCCTCTTATTGCTACAGCAA+TGG 0.516367 2.3:-14255010 MS.gene073188:CDS
AAGGGAAGACCATCAATATG+AGG 0.535527 2.3:+14255072 None:intergenic
ATAAGAGGGACTAAAGAAAA+GGG 0.535599 2.3:+14255024 None:intergenic
TGAAGATGTTTCAGCACCAA+AGG 0.541229 2.3:+14255053 None:intergenic
AGGGGACCTGAAAGTAGATA+AGG 0.543856 2.3:+14254565 None:intergenic
ATTGAAGAAGCTTTACCAGA+AGG 0.550767 2.3:-14254340 MS.gene073188:CDS
GTTGGTGTAGAAGTTGAGAA+AGG 0.554703 2.3:-14254103 MS.gene073188:CDS
TTTGGTGTTTCAGGTAATAG+GGG 0.556410 2.3:+14254547 None:intergenic
ATAGATTCAAATCCATTAGG+TGG 0.565472 2.3:+14254361 None:intergenic
GGGATTCAAGCATGGTTCCG+TGG 0.573311 2.3:-14254488 MS.gene073188:CDS
GAAGATGTTTCAGCACCAAA+GGG 0.579195 2.3:+14255054 None:intergenic
TTATACGATCGTTTGCACAT+AGG 0.579668 2.3:-14254676 MS.gene073188:CDS
GAATCAGGGTACCCTGAAGG+TGG 0.580018 2.3:+14254775 None:intergenic
TTCAATTTCTATCTTCATCG+AGG 0.580795 2.3:-14254726 MS.gene073188:CDS
AATGATGAGTGAAAAGATGA+AGG 0.586314 2.3:-14254125 MS.gene073188:CDS
GTTATGAAACATCCAACAGA+AGG 0.588945 2.3:+14254244 None:intergenic
ATGAGTGAAAAGATGAAGGT+TGG 0.593081 2.3:-14254121 MS.gene073188:CDS
AACATTGCTATGTGAAGAGG+AGG 0.593159 2.3:+14255258 None:intergenic
GGAAACATTGCTATGTGAAG+AGG 0.596025 2.3:+14255255 None:intergenic
AGGAACATTGAGAGGGACAA+AGG 0.596057 2.3:+14255092 None:intergenic
TCAATATGAGGAACATTGAG+AGG 0.597639 2.3:+14255084 None:intergenic
ACTCGTTAACACGTGTCAGT+TGG 0.599240 2.3:-14254191 MS.gene073188:CDS
TGGCTTAAGGGATTCAAGCA+TGG 0.607527 2.3:-14254496 MS.gene073188:CDS
AAGAGGAGGAAGAGATCCCA+TGG 0.613093 2.3:+14255272 None:intergenic
GATGAATCAGGGTACCCTGA+AGG 0.614727 2.3:+14254772 None:intergenic
TGAGAGGGACAAAGGTGATG+AGG 0.616523 2.3:+14255100 None:intergenic
TGAAGCTGTGAAAATTGTGA+TGG 0.621129 2.3:-14254044 MS.gene073188:CDS
AAAGCTTGATGGATGAATCA+GGG 0.625829 2.3:+14254761 None:intergenic
CCATTGCTGTAGCAATAAGA+GGG 0.627450 2.3:+14255010 None:intergenic
ACACGTGTTAACGAGTGCCT+CGG 0.644065 2.3:+14254198 None:intergenic
AATCAGGGTACCCTGAAGGT+GGG 0.645110 2.3:+14254776 None:intergenic
CAATATGAGGAACATTGAGA+GGG 0.658346 2.3:+14255085 None:intergenic
AAGTGTCCCATAGCAAACCA+TGG 0.661811 2.3:+14255234 None:intergenic
AATGGACCAAGACATAGCCA+AGG 0.696804 2.3:-14254829 MS.gene073188:CDS
TTATGAAACATCCAACAGAA+GGG 0.698749 2.3:+14254245 None:intergenic
TGGAGCTGCTTCCATAACCG+AGG 0.702297 2.3:-14254215 MS.gene073188:CDS
ATATGATCAACACCTACACG+TGG 0.735778 2.3:+14254160 None:intergenic
GGATGTTTCATAACACACTG+TGG 0.766209 2.3:-14254235 MS.gene073188:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAAAATAAGATATTGAAAA+TGG + chr2.3:14254336-14254355 None:intergenic 15.0%
!! GAAAAAATCATAATGAATTA+AGG - chr2.3:14255195-14255214 MS.gene073188:CDS 15.0%
!!! CATTTTCAATATCTTATTTT+TGG - chr2.3:14254334-14254353 MS.gene073188:CDS 15.0%
!!! TTTTCTTTGATTTTCAATAT+TGG - chr2.3:14254253-14254272 MS.gene073188:CDS 15.0%
!! AAACAACTTTAGATGAAAAA+TGG - chr2.3:14254661-14254680 MS.gene073188:CDS 20.0%
!! AAATCAAAGAAAACTATTTG+TGG + chr2.3:14254246-14254265 None:intergenic 20.0%
!! AACAACTTTAGATGAAAAAT+GGG - chr2.3:14254662-14254681 MS.gene073188:CDS 20.0%
!! AATCAAAGAAAACTATTTGT+GGG + chr2.3:14254245-14254264 None:intergenic 20.0%
!!! GAATTTCTTGGAAATTTTTA+TGG - chr2.3:14254594-14254613 MS.gene073188:CDS 20.0%
!!! TCAATATCTTATTTTTGGAA+TGG - chr2.3:14254339-14254358 MS.gene073188:CDS 20.0%
!!! TGAAACTGATTTTTTTCTAA+TGG + chr2.3:14254750-14254769 None:intergenic 20.0%
!!! TTTTCATCTAAAGTTGTTTT+TGG + chr2.3:14254660-14254679 None:intergenic 20.0%
! AATGAAAGGATTAAAGGAAA+AGG - chr2.3:14254873-14254892 MS.gene073188:CDS 25.0%
! ACAAATTGAACTTCTTCTTA+AGG - chr2.3:14254212-14254231 MS.gene073188:CDS 25.0%
! ATGAAAGGATTAAAGGAAAA+GGG - chr2.3:14254874-14254893 MS.gene073188:CDS 25.0%
! GTATCAAAAGTCTTCAATAT+TGG - chr2.3:14254301-14254320 MS.gene073188:CDS 25.0%
! TCAATAGATTCAAATCCATT+AGG + chr2.3:14254831-14254850 None:intergenic 25.0%
!! AATTTTTGTGAAAAGCTTCA+AGG - chr2.3:14255260-14255279 MS.gene073188:CDS 25.0%
!!! AACTTGGTTTGTGTTTTTTT+AGG + chr2.3:14254042-14254061 None:intergenic 25.0%
!!! ACTTGGTTTGTGTTTTTTTA+GGG + chr2.3:14254041-14254060 None:intergenic 25.0%
AAAGGAAAAGGGATTGTTTA+TGG - chr2.3:14254885-14254904 MS.gene073188:CDS 30.0%
AATAAGAGGGACTAAAGAAA+AGG + chr2.3:14254166-14254185 None:intergenic 30.0%
AATGATGAGTGAAAAGATGA+AGG - chr2.3:14255061-14255080 MS.gene073188:CDS 30.0%
ATAAGAGGGACTAAAGAAAA+GGG + chr2.3:14254165-14254184 None:intergenic 30.0%
ATAGATTCAAATCCATTAGG+TGG + chr2.3:14254828-14254847 None:intergenic 30.0%
TAGATGAAAAATGGGAATCA+TGG - chr2.3:14254670-14254689 MS.gene073188:CDS 30.0%
TCCAACAAATTAGCAAAAAG+AGG - chr2.3:14253994-14254013 MS.gene073188:CDS 30.0%
TTATGAAACATCCAACAGAA+GGG + chr2.3:14254944-14254963 None:intergenic 30.0%
TTCAATTTCTATCTTCATCG+AGG - chr2.3:14254460-14254479 MS.gene073188:CDS 30.0%
TTTCCAAGAAATTCAGCATA+TGG + chr2.3:14254588-14254607 None:intergenic 30.0%
! TTCATGTTGATAAAGCTTGA+TGG + chr2.3:14254439-14254458 None:intergenic 30.0%
!! ACCTCTTTTTGCTAATTTGT+TGG + chr2.3:14253998-14254017 None:intergenic 30.0%
!!! AAAGTTGTTTTTGGTGTTTC+AGG + chr2.3:14254651-14254670 None:intergenic 30.0%
!!! TTTTGGTGTTTCAGGTAATA+GGG + chr2.3:14254643-14254662 None:intergenic 30.0%
!!! TTTTTGCTAATTTGTTGGAG+AGG + chr2.3:14253993-14254012 None:intergenic 30.0%
!!! TTTTTGGTGTTTCAGGTAAT+AGG + chr2.3:14254644-14254663 None:intergenic 30.0%
AAAATGGGAATCATGGCTTA+AGG - chr2.3:14254677-14254696 MS.gene073188:CDS 35.0%
AAATGGGAATCATGGCTTAA+GGG - chr2.3:14254678-14254697 MS.gene073188:CDS 35.0%
AAGGGATTGTTTATGGAAGT+TGG - chr2.3:14254892-14254911 MS.gene073188:CDS 35.0%
AAGGTTGAGATGTTGTAACT+TGG + chr2.3:14254058-14254077 None:intergenic 35.0%
ACAAGTTTAGCTGATGCAAT+TGG - chr2.3:14254534-14254553 MS.gene073188:CDS 35.0%
ATGAGTGAAAAGATGAAGGT+TGG - chr2.3:14255065-14255084 MS.gene073188:CDS 35.0%
ATGGATGATGAGAATGAAGT+TGG - chr2.3:14255161-14255180 MS.gene073188:CDS 35.0%
ATTGAAGAAGCTTTACCAGA+AGG - chr2.3:14254846-14254865 MS.gene073188:CDS 35.0%
CAATATGAGGAACATTGAGA+GGG + chr2.3:14254104-14254123 None:intergenic 35.0%
CCAAACTTGACTCAAAAACT+TGG - chr2.3:14254279-14254298 MS.gene073188:CDS 35.0%
CTCAATGTTCCTCATATTGA+TGG - chr2.3:14254105-14254124 MS.gene073188:CDS 35.0%
GAACCATATGCTGAATTTCT+TGG - chr2.3:14254582-14254601 MS.gene073188:CDS 35.0%
GGAAAACCTTATCTACTTTC+AGG - chr2.3:14254615-14254634 MS.gene073188:CDS 35.0%
GGGTTCAATGAAAGGATTAA+AGG - chr2.3:14254867-14254886 MS.gene073188:CDS 35.0%
GTTATGAAACATCCAACAGA+AGG + chr2.3:14254945-14254964 None:intergenic 35.0%
TCAATATGAGGAACATTGAG+AGG + chr2.3:14254105-14254124 None:intergenic 35.0%
TCCATATGCACAAAAAACCA+CGG + chr2.3:14254718-14254737 None:intergenic 35.0%
TGAAGCTGTGAAAATTGTGA+TGG - chr2.3:14255142-14255161 MS.gene073188:CDS 35.0%
TTATACGATCGTTTGCACAT+AGG - chr2.3:14254510-14254529 MS.gene073188:CDS 35.0%
TTCACATAGCAATGTTTCCA+TGG - chr2.3:14253935-14253954 MS.gene073188:CDS 35.0%
TTGAAGAAGCTTTACCAGAA+GGG - chr2.3:14254847-14254866 MS.gene073188:CDS 35.0%
! AAAGCTTGATGGATGAATCA+GGG + chr2.3:14254428-14254447 None:intergenic 35.0%
! CTACAGTTAATCCTTTTCCT+TGG + chr2.3:14254377-14254396 None:intergenic 35.0%
! TAAAGCTTGATGGATGAATC+AGG + chr2.3:14254429-14254448 None:intergenic 35.0%
! TTTTGTGCATATGGAAGTGA+AGG - chr2.3:14254723-14254742 MS.gene073188:CDS 35.0%
!! AATGTTTCCATGGTTTGCTA+TGG - chr2.3:14253945-14253964 MS.gene073188:CDS 35.0%
!! ATGTTTCCATGGTTTGCTAT+GGG - chr2.3:14253946-14253965 MS.gene073188:CDS 35.0%
!! TTTGGTGTTTCAGGTAATAG+GGG + chr2.3:14254642-14254661 None:intergenic 35.0%
!!! CCAAGTTTTTGAGTCAAGTT+TGG + chr2.3:14254282-14254301 None:intergenic 35.0%
AACATTGCTATGTGAAGAGG+AGG + chr2.3:14253931-14253950 None:intergenic 40.0%
AAGGGAAGACCATCAATATG+AGG + chr2.3:14254117-14254136 None:intergenic 40.0%
ATATGATCAACACCTACACG+TGG + chr2.3:14255029-14255048 None:intergenic 40.0%
ATCCTTTCATTGAACCCTTC+TGG + chr2.3:14254864-14254883 None:intergenic 40.0%
CAGTTTCAAGAGTTGTTGCT+TGG - chr2.3:14254762-14254781 MS.gene073188:CDS 40.0%
CCATTGCTGTAGCAATAAGA+GGG + chr2.3:14254179-14254198 None:intergenic 40.0%
GAAGATGTTTCAGCACCAAA+GGG + chr2.3:14254135-14254154 None:intergenic 40.0%
GGAAACATTGCTATGTGAAG+AGG + chr2.3:14253934-14253953 None:intergenic 40.0%
GGATGTTTCATAACACACTG+TGG - chr2.3:14254951-14254970 MS.gene073188:CDS 40.0%
GTTGAGAAAGGTGATGAAGA+TGG - chr2.3:14255095-14255114 MS.gene073188:CDS 40.0%
GTTGGTGTAGAAGTTGAGAA+AGG - chr2.3:14255083-14255102 MS.gene073188:CDS 40.0%
TACCAGAAGGGTTCAATGAA+AGG - chr2.3:14254859-14254878 MS.gene073188:CDS 40.0%
TCATCGAGGAAACTTGTCTT+CGG - chr2.3:14254474-14254493 MS.gene073188:CDS 40.0%
TCCATTGCTGTAGCAATAAG+AGG + chr2.3:14254180-14254199 None:intergenic 40.0%
TGAAGATGTTTCAGCACCAA+AGG + chr2.3:14254136-14254155 None:intergenic 40.0%
TGTTGGAGAGGTGAAGATAT+GGG + chr2.3:14253981-14254000 None:intergenic 40.0%
TTGTTGGAGAGGTGAAGATA+TGG + chr2.3:14253982-14254001 None:intergenic 40.0%
! CATATTGATGGTCTTCCCTT+TGG - chr2.3:14254117-14254136 MS.gene073188:CDS 40.0%
! GCTGATGCAATTGGTTTCAA+AGG - chr2.3:14254543-14254562 MS.gene073188:CDS 40.0%
!! ATTCTAGAACACCCTTCTGT+TGG - chr2.3:14254930-14254949 MS.gene073188:CDS 40.0%
!! TTGCTTGGTCTTGAGTTAAC+AGG - chr2.3:14254777-14254796 MS.gene073188:CDS 40.0%
!!! TCCGTGGTTTTTTGTGCATA+TGG - chr2.3:14254714-14254733 MS.gene073188:CDS 40.0%
AAGTGTCCCATAGCAAACCA+TGG + chr2.3:14253955-14253974 None:intergenic 45.0%
AATGGACCAAGACATAGCCA+AGG - chr2.3:14254357-14254376 MS.gene073188:CDS 45.0%
ACTCGTTAACACGTGTCAGT+TGG - chr2.3:14254995-14255014 MS.gene073188:CDS 45.0%
AGGAAACTTGTCTTCGGAAG+TGG - chr2.3:14254480-14254499 MS.gene073188:CDS 45.0%
AGGAACATTGAGAGGGACAA+AGG + chr2.3:14254097-14254116 None:intergenic 45.0%
AGGGGACCTGAAAGTAGATA+AGG + chr2.3:14254624-14254643 None:intergenic 45.0%
CCAAGACATAGCCAAGGAAA+AGG - chr2.3:14254363-14254382 MS.gene073188:CDS 45.0%
CCCTCTTATTGCTACAGCAA+TGG - chr2.3:14254176-14254195 MS.gene073188:CDS 45.0%
GGACAAAGGTGATGAGGTTT+GGG + chr2.3:14254083-14254102 None:intergenic 45.0%
GTTGGAGAGGTGAAGATATG+GGG + chr2.3:14253980-14253999 None:intergenic 45.0%
TGGCTTAAGGGATTCAAGCA+TGG - chr2.3:14254690-14254709 MS.gene073188:CDS 45.0%
! AGGTGATGAGGTTTGGGTTA+AGG + chr2.3:14254077-14254096 None:intergenic 45.0%
! CCTTTTCCTTGGCTATGTCT+TGG + chr2.3:14254366-14254385 None:intergenic 45.0%
! GGCTTTAGTGCTGCAAGAAA+TGG + chr2.3:14254807-14254826 None:intergenic 45.0%
!!! TTGGTTTTGTTGCCACGTGT+AGG - chr2.3:14255014-14255033 MS.gene073188:CDS 45.0%
ACACGTGTTAACGAGTGCCT+CGG + chr2.3:14254991-14255010 None:intergenic 50.0%
ATCTCAAGCACCCACCTTCA+GGG - chr2.3:14254400-14254419 MS.gene073188:CDS 50.0%
GCAGCACTAAAGCCACCTAA+TGG - chr2.3:14254813-14254832 MS.gene073188:CDS 50.0%
GGGACAAAGGTGATGAGGTT+TGG + chr2.3:14254084-14254103 None:intergenic 50.0%
GTTAACGAGTGCCTCGGTTA+TGG + chr2.3:14254985-14255004 None:intergenic 50.0%
TGAGAGGGACAAAGGTGATG+AGG + chr2.3:14254089-14254108 None:intergenic 50.0%
! AATCAGGGTACCCTGAAGGT+GGG + chr2.3:14254413-14254432 None:intergenic 50.0%
! GATGAATCAGGGTACCCTGA+AGG + chr2.3:14254417-14254436 None:intergenic 50.0%
GATCTCAAGCACCCACCTTC+AGG - chr2.3:14254399-14254418 MS.gene073188:CDS 55.0%
GGGATTCAAGCATGGTTCCG+TGG - chr2.3:14254698-14254717 MS.gene073188:CDS 55.0%
TGGAGCTGCTTCCATAACCG+AGG - chr2.3:14254971-14254990 MS.gene073188:CDS 55.0%
! GAATCAGGGTACCCTGAAGG+TGG + chr2.3:14254414-14254433 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 14253916 14255292 14253916 ID=MS.gene073188
chr2.3 mRNA 14253916 14255292 14253916 ID=MS.gene073188.t1;Parent=MS.gene073188
chr2.3 exon 14253916 14255292 14253916 ID=MS.gene073188.t1.exon1;Parent=MS.gene073188.t1
chr2.3 CDS 14253916 14255292 14253916 ID=cds.MS.gene073188.t1;Parent=MS.gene073188.t1
Gene Sequence

>MS.gene073188

ATGGGATCTCTTCCTCCTCTTCACATAGCAATGTTTCCATGGTTTGCTATGGGACACTTAACCCCATATCTTCACCTCTCCAACAAATTAGCAAAAAGAGGTCACAAAATATCATTCTTCATCCCTAAAAAAACACAAACCAAGTTACAACATCTCAACCTTAACCCAAACCTCATCACCTTTGTCCCTCTCAATGTTCCTCATATTGATGGTCTTCCCTTTGGTGCTGAAACATCTTCAGATGTACCCTTTTCTTTAGTCCCTCTTATTGCTACAGCAATGGATCAAACAGAAAAACAAATTGAACTTCTTCTTAAGGAACTAAACCCACAAATAGTTTTCTTTGATTTTCAATATTGGCTACCAAACTTGACTCAAAAACTTGGTATCAAAAGTCTTCAATATTGGATAACTAGTCCATTTTCAATATCTTATTTTTGGAATGGACCAAGACATAGCCAAGGAAAAGGATTAACTGTAGATGATCTCAAGCACCCACCTTCAGGGTACCCTGATTCATCCATCAAGCTTTATCAACATGAACTTCAATTTCTATCTTCATCGAGGAAACTTGTCTTCGGAAGTGGTGTATTTTTATACGATCGTTTGCACATAGGTACAAGTTTAGCTGATGCAATTGGTTTCAAAGGCTGCAAAGAACTTGATGAACCATATGCTGAATTTCTTGGAAATTTTTATGGAAAACCTTATCTACTTTCAGGTCCCCTATTACCTGAAACACCAAAAACAACTTTAGATGAAAAATGGGAATCATGGCTTAAGGGATTCAAGCATGGTTCCGTGGTTTTTTGTGCATATGGAAGTGAAGGTCCATTAGAAAAAAATCAGTTTCAAGAGTTGTTGCTTGGTCTTGAGTTAACAGGTTTTCCATTTCTTGCAGCACTAAAGCCACCTAATGGATTTGAATCTATTGAAGAAGCTTTACCAGAAGGGTTCAATGAAAGGATTAAAGGAAAAGGGATTGTTTATGGAAGTTGGATTCAACAACAGTTGATTCTAGAACACCCTTCTGTTGGATGTTTCATAACACACTGTGGAGCTGCTTCCATAACCGAGGCACTCGTTAACACGTGTCAGTTGGTTTTGTTGCCACGTGTAGGTGTTGATCATATTATGAATGCAAGAATGATGAGTGAAAAGATGAAGGTTGGTGTAGAAGTTGAGAAAGGTGATGAAGATGGTTTGTTTACAAAAGAAAGTGTGTGTGAAGCTGTGAAAATTGTGATGGATGATGAGAATGAAGTTGGAAGAGAAGTGAGAAAAAATCATAATGAATTAAGGAAGTTTTTATTGAGTGAGAATTTAGAGTCTTCTTGTGTTGATAATTTTTGTGAAAAGCTTCAAGGTTTGATTTAA

Protein sequence

>MS.gene073188.t1

MGSLPPLHIAMFPWFAMGHLTPYLHLSNKLAKRGHKISFFIPKKTQTKLQHLNLNPNLITFVPLNVPHIDGLPFGAETSSDVPFSLVPLIATAMDQTEKQIELLLKELNPQIVFFDFQYWLPNLTQKLGIKSLQYWITSPFSISYFWNGPRHSQGKGLTVDDLKHPPSGYPDSSIKLYQHELQFLSSSRKLVFGSGVFLYDRLHIGTSLADAIGFKGCKELDEPYAEFLGNFYGKPYLLSGPLLPETPKTTLDEKWESWLKGFKHGSVVFCAYGSEGPLEKNQFQELLLGLELTGFPFLAALKPPNGFESIEEALPEGFNERIKGKGIVYGSWIQQQLILEHPSVGCFITHCGAASITEALVNTCQLVLLPRVGVDHIMNARMMSEKMKVGVEVEKGDEDGLFTKESVCEAVKIVMDDENEVGREVRKNHNELRKFLLSENLESSCVDNFCEKLQGLI