AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene69837


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69837.t1 MTR_2g083480 79.431 457 80 1 1 443 1 457 0.0 738
MS.gene69837.t1 MTR_2g083420 76.856 458 68 2 1 444 1 434 0.0 724
MS.gene69837.t1 MTR_2g083390 76.253 459 71 2 1 445 1 435 0.0 723
MS.gene69837.t1 MTR_2g083430 77.533 454 88 1 5 444 5 458 0.0 700
MS.gene69837.t1 MTR_2g083380 65.284 458 145 2 1 444 18 475 0.0 599
MS.gene69837.t1 MTR_2g083490 63.834 459 152 1 1 445 1 459 0.0 597
MS.gene69837.t1 MTR_4g079270 58.043 460 175 4 1 444 1 458 0.0 551
MS.gene69837.t1 MTR_4g079250 58.696 460 172 5 1 444 1 458 0.0 550
MS.gene69837.t1 MTR_2g083360 63.135 453 48 6 6 444 27 374 0.0 525
MS.gene69837.t1 MTR_2g014900 55.432 451 186 2 8 444 7 456 0.0 513
MS.gene69837.t1 MTR_2g086283 53.580 433 103 4 11 443 1 335 3.19e-152 436
MS.gene69837.t1 MTR_1g090270 38.445 463 247 11 7 443 14 464 3.93e-105 320
MS.gene69837.t1 MTR_4g059370 39.344 305 166 7 148 443 97 391 4.71e-72 232
MS.gene69837.t1 MTR_7g067330 32.237 456 261 14 2 441 3 426 1.58e-65 216
MS.gene69837.t1 MTR_7g067120 33.407 452 261 14 2 441 3 426 6.52e-65 215
MS.gene69837.t1 MTR_8g068330 30.769 468 290 13 1 441 1 461 1.10e-64 215
MS.gene69837.t1 MTR_8g068360 32.280 443 262 13 7 419 11 445 5.43e-63 211
MS.gene69837.t1 MTR_4g123553 31.579 456 282 14 6 441 13 458 1.31e-62 210
MS.gene69837.t1 MTR_8g068340 30.435 460 290 11 7 441 11 465 2.80e-62 209
MS.gene69837.t1 MTR_2g083440 94.175 103 6 0 343 445 11 113 3.16e-62 197
MS.gene69837.t1 MTR_2g008226 32.627 472 272 17 6 442 8 468 4.80e-59 201
MS.gene69837.t1 MTR_6g036650 30.169 474 282 13 1 441 11 468 5.78e-59 201
MS.gene69837.t1 MTR_2g008225 30.388 464 288 11 2 440 9 462 6.33e-59 200
MS.gene69837.t1 MTR_2g008220 31.034 464 285 13 2 440 8 461 2.71e-58 199
MS.gene69837.t1 MTR_6g042310 31.236 461 275 15 7 441 17 461 2.46e-57 196
MS.gene69837.t1 MTR_2g014930 41.818 275 94 7 17 291 9 217 3.91e-56 186
MS.gene69837.t1 MTR_4g079280 42.791 215 90 2 11 224 1 183 9.40e-54 178
MS.gene69837.t1 MTR_2g046620 29.451 455 293 13 6 441 14 459 1.10e-51 181
MS.gene69837.t1 MTR_4g077960 28.348 448 285 15 17 441 1 435 1.12e-46 167
MS.gene69837.t1 MTR_5g066410 29.630 459 283 12 11 445 1 443 4.22e-46 166
MS.gene69837.t1 MTR_8g007650 29.832 476 283 14 7 445 6 467 2.82e-45 164
MS.gene69837.t1 MTR_8g007565 29.622 476 284 14 7 445 6 467 3.00e-45 164
MS.gene69837.t1 MTR_3g435310 28.894 443 267 15 6 441 16 417 3.81e-45 162
MS.gene69837.t1 MTR_1g090280 38.942 208 115 5 247 443 108 314 4.51e-43 154
MS.gene69837.t1 MTR_8g071070 27.234 470 303 15 8 443 7 471 2.19e-35 137
MS.gene69837.t1 MTR_8g066610 26.860 484 302 16 6 445 7 482 1.95e-33 131
MS.gene69837.t1 MTR_5g087620 26.160 474 289 15 8 429 10 474 2.59e-32 128
MS.gene69837.t1 MTR_0009s0240 25.581 473 294 16 8 445 7 456 3.31e-31 125
MS.gene69837.t1 MTR_4g031800 26.681 476 304 17 6 445 7 473 4.20e-31 125
MS.gene69837.t1 MTR_8g009055 28.603 458 265 19 7 421 5 443 8.84e-31 124
MS.gene69837.t1 MTR_8g465670 26.623 462 266 18 9 420 8 446 1.01e-29 121
MS.gene69837.t1 MTR_4g485590 28.321 399 234 14 8 380 9 381 1.43e-29 119
MS.gene69837.t1 MTR_2g098430 24.946 461 285 14 9 423 7 452 2.22e-29 120
MS.gene69837.t1 MTR_8g009050 27.637 474 249 19 7 421 5 443 3.83e-29 119
MS.gene69837.t1 MTR_6g023665 28.166 458 251 20 9 414 14 445 2.12e-28 117
MS.gene69837.t1 MTR_8g009073 27.406 478 284 22 7 443 5 460 4.03e-28 116
MS.gene69837.t1 MTR_1g062380 25.591 465 274 20 7 411 15 467 6.14e-27 113
MS.gene69837.t1 MTR_8g006220 25.957 470 267 16 9 420 7 453 6.78e-27 113
MS.gene69837.t1 MTR_8g008990 27.948 458 270 18 7 421 5 445 8.83e-27 112
MS.gene69837.t1 MTR_8g027885 28.118 473 280 20 5 438 16 467 2.13e-26 111
MS.gene69837.t1 MTR_7g117170 27.682 466 264 21 4 421 12 452 2.81e-26 111
MS.gene69837.t1 MTR_6g488280 35.714 182 104 3 245 414 258 438 3.51e-26 110
MS.gene69837.t1 MTR_0428s0010 35.714 182 104 3 245 414 258 438 3.51e-26 110
MS.gene69837.t1 MTR_8g027870 27.273 484 270 20 5 438 16 467 4.29e-26 110
MS.gene69837.t1 MTR_3g009510 33.333 210 121 4 222 415 241 447 5.33e-26 110
MS.gene69837.t1 MTR_7g102460 26.526 475 274 20 5 422 6 462 5.33e-26 110
MS.gene69837.t1 MTR_8g009073 31.769 277 167 10 160 421 43 312 6.12e-26 108
MS.gene69837.t1 MTR_5g045970 25.514 486 309 17 7 445 15 494 8.44e-26 110
MS.gene69837.t1 MTR_4g117980 23.581 458 306 14 1 419 4 456 1.13e-25 109
MS.gene69837.t1 MTR_6g033615 26.846 447 255 17 9 414 5 420 1.34e-25 108
MS.gene69837.t1 MTR_0184s0030 35.185 216 116 6 223 420 234 443 1.35e-25 109
MS.gene69837.t1 MTR_7g070740 25.383 457 289 14 7 419 10 458 1.79e-25 108
MS.gene69837.t1 MTR_4g485630 25.607 453 288 15 7 422 8 448 2.32e-25 108
MS.gene69837.t1 MTR_4g485620 25.536 466 300 15 20 445 1 459 3.53e-25 107
MS.gene69837.t1 MTR_0078s0060 29.368 269 155 9 169 422 194 442 4.19e-25 107
MS.gene69837.t1 MTR_7g013220 26.444 450 291 19 8 431 5 440 6.70e-25 107
MS.gene69837.t1 MTR_8g006260 30.943 265 158 10 169 422 197 447 1.11e-24 106
MS.gene69837.t1 MTR_7g070660 23.707 464 309 15 7 430 10 468 1.56e-24 106
MS.gene69837.t1 MTR_8g009063 27.137 468 258 17 7 422 12 448 1.59e-24 106
MS.gene69837.t1 MTR_6g038220 25.536 466 269 18 8 434 11 437 1.69e-24 105
MS.gene69837.t1 MTR_8g012635 33.971 209 117 5 222 414 242 445 1.86e-24 105
MS.gene69837.t1 MTR_6g038200 25.383 457 250 18 8 415 11 425 2.28e-24 105
MS.gene69837.t1 MTR_5g035580 34.615 208 124 6 238 444 257 453 2.59e-24 105
MS.gene69837.t1 MTR_2g046820 33.478 230 139 6 222 440 236 462 4.32e-24 104
MS.gene69837.t1 MTR_6g033625 25.959 443 278 16 9 414 5 434 7.14e-24 103
MS.gene69837.t1 MTR_7g013200 25.408 429 277 14 8 413 5 413 7.44e-24 103
MS.gene69837.t1 MTR_1g019520 32.258 217 128 5 244 445 5 217 8.15e-24 99.4
MS.gene69837.t1 MTR_8g012730 35.263 190 105 4 245 418 99 286 1.03e-23 101
MS.gene69837.t1 MTR_6g038230 24.894 470 268 19 8 434 11 438 1.14e-23 103
MS.gene69837.t1 MTR_5g098930 23.444 482 307 13 7 442 4 469 1.51e-23 103
MS.gene69837.t1 MTR_8g083280 33.047 233 120 9 227 435 249 469 1.63e-23 103
MS.gene69837.t1 MTR_8g009067 35.106 188 108 5 244 421 140 323 1.80e-23 101
MS.gene69837.t1 MTR_8g009067 30.566 265 153 8 170 421 195 441 2.07e-23 102
MS.gene69837.t1 MTR_0184s0040 33.511 188 111 5 245 422 275 458 2.29e-23 102
MS.gene69837.t1 MTR_0078s0190 33.511 188 111 5 245 422 275 458 2.29e-23 102
MS.gene69837.t1 MTR_1g107350 25.652 460 288 17 1 421 1 445 2.70e-23 102
MS.gene69837.t1 MTR_4g082820 27.635 427 250 15 7 387 6 419 3.88e-23 102
MS.gene69837.t1 MTR_8g012650 28.425 292 181 6 169 444 196 475 4.90e-23 101
MS.gene69837.t1 MTR_7g013180 25.472 424 275 13 8 405 5 413 7.02e-23 100
MS.gene69837.t1 MTR_8g006730 35.165 182 105 4 245 414 260 440 7.19e-23 101
MS.gene69837.t1 MTR_7g055710 23.904 456 297 13 7 419 10 458 7.26e-23 101
MS.gene69837.t1 MTR_8g006710 33.516 182 108 3 245 414 259 439 7.85e-23 100
MS.gene69837.t1 MTR_6g005600 28.904 301 173 9 154 439 179 453 8.03e-23 100
MS.gene69837.t1 MTR_7g102490 25.641 468 283 19 5 419 6 461 8.30e-23 101
MS.gene69837.t1 MTR_4g024020 25.751 466 290 18 3 419 4 462 9.03e-23 100
MS.gene69837.t1 MTR_5g098960 26.522 460 248 22 1 412 1 418 1.03e-22 100
MS.gene69837.t1 MTR_5g035560 35.294 204 116 8 244 442 261 453 1.68e-22 100
MS.gene69837.t1 MTR_3g049970 26.395 466 267 19 6 421 7 446 2.23e-22 99.8
MS.gene69837.t1 MTR_8g012630 34.409 186 104 5 245 414 206 389 2.35e-22 99.0
MS.gene69837.t1 MTR_8g074550 23.251 486 285 19 1 420 1 464 2.43e-22 99.8
MS.gene69837.t1 MTR_0078s0010 34.759 187 108 5 245 421 260 442 2.61e-22 99.4
MS.gene69837.t1 MTR_7g117405 26.170 470 278 21 2 422 9 458 2.89e-22 99.4
MS.gene69837.t1 MTR_8g466240 30.846 201 122 6 198 384 202 399 3.32e-22 99.0
MS.gene69837.t1 MTR_4g485640 26.147 436 265 19 18 414 219 636 4.04e-22 99.8
MS.gene69837.t1 MTR_2g046750 33.478 230 139 6 222 440 239 465 6.34e-22 98.2
MS.gene69837.t1 MTR_8g006270 28.000 275 168 9 153 413 178 436 7.24e-22 98.2
MS.gene69837.t1 MTR_2g040530 32.039 206 128 4 245 440 261 464 8.56e-22 97.8
MS.gene69837.t1 MTR_0536s0010 25.383 457 284 19 3 421 16 453 8.75e-22 97.8
MS.gene69837.t1 MTR_6g033725 26.154 455 259 19 9 414 5 431 1.07e-21 97.8
MS.gene69837.t1 MTR_7g046490 34.392 189 108 5 244 420 255 439 1.10e-21 97.4
MS.gene69837.t1 MTR_3g079480 25.349 501 280 23 8 445 21 490 1.24e-21 97.4
MS.gene69837.t1 MTR_7g102560 25.652 460 290 17 5 419 6 458 1.41e-21 97.4
MS.gene69837.t1 MTR_4g117950 25.556 450 287 16 6 421 4 439 1.45e-21 97.4
MS.gene69837.t1 MTR_7g102520 26.304 460 288 17 7 422 11 463 1.76e-21 97.4
MS.gene69837.t1 MTR_7g071040 23.636 440 294 14 7 413 16 446 2.15e-21 97.1
MS.gene69837.t1 MTR_1g019510 30.876 217 131 5 244 445 256 468 2.36e-21 96.7
MS.gene69837.t1 MTR_7g070810 24.664 446 294 14 7 414 8 449 2.92e-21 96.3
MS.gene69837.t1 MTR_7g070610 22.926 458 288 15 7 413 12 455 2.99e-21 96.7
MS.gene69837.t1 MTR_7g070910 23.581 458 297 16 7 419 10 459 3.53e-21 96.3
MS.gene69837.t1 MTR_8g077590 32.020 203 125 4 223 414 240 440 4.38e-21 95.9
MS.gene69837.t1 MTR_6g038240 32.749 171 104 6 245 415 266 425 4.58e-21 95.5
MS.gene69837.t1 MTR_7g047030 33.690 187 110 5 245 421 260 442 4.65e-21 95.9
MS.gene69837.t1 MTR_7g047270 33.690 187 110 5 245 421 260 442 4.65e-21 95.9
MS.gene69837.t1 MTR_4g082810 28.708 418 242 15 7 383 6 408 8.06e-21 94.4
MS.gene69837.t1 MTR_7g102450 24.565 460 281 19 8 422 11 449 8.60e-21 95.1
MS.gene69837.t1 MTR_8g083290 24.396 455 291 18 6 422 2 441 1.06e-20 94.7
MS.gene69837.t1 MTR_3g069690 32.065 184 116 5 239 421 251 426 1.37e-20 94.4
MS.gene69837.t1 MTR_2g059240 24.515 412 269 10 5 383 10 412 1.60e-20 94.0
MS.gene69837.t1 MTR_2g034990 23.767 446 299 14 1 408 4 446 1.68e-20 94.4
MS.gene69837.t1 MTR_7g070940 23.256 473 322 15 7 443 8 475 1.72e-20 94.0
MS.gene69837.t1 MTR_1g107315 26.698 427 267 16 8 398 8 424 2.31e-20 93.6
MS.gene69837.t1 MTR_7g102550 23.909 481 306 18 8 438 9 479 2.43e-20 93.6
MS.gene69837.t1 MTR_8g008970 27.609 297 166 9 156 421 163 441 2.80e-20 94.4
MS.gene69837.t1 MTR_8g008970 33.333 180 106 5 244 422 597 763 4.07e-17 84.3
MS.gene69837.t1 MTR_8g012745 31.687 243 139 10 194 413 203 441 3.86e-20 92.8
MS.gene69837.t1 MTR_5g090610 27.437 277 172 8 172 424 173 444 3.93e-20 92.8
MS.gene69837.t1 MTR_7g013240 33.721 172 105 6 245 414 252 416 4.74e-20 92.4
MS.gene69837.t1 MTR_5g090700 30.804 224 132 7 222 424 239 460 5.60e-20 92.4
MS.gene69837.t1 MTR_8g064880 26.126 444 249 19 6 396 7 424 6.19e-20 92.4
MS.gene69837.t1 MTR_7g013260 25.059 423 269 17 8 404 6 406 6.90e-20 92.0
MS.gene69837.t1 MTR_7g070780 23.261 460 297 14 6 419 9 458 7.11e-20 92.4
MS.gene69837.t1 MTR_7g070800 22.538 457 307 13 3 419 1 450 7.32e-20 92.4
MS.gene69837.t1 MTR_3g009490 33.750 160 90 4 269 415 3 159 8.42e-20 87.4
MS.gene69837.t1 MTR_6g035185 22.979 470 295 16 1 419 4 457 1.10e-19 91.7
MS.gene69837.t1 MTR_6g033675 28.750 240 153 8 189 415 201 435 1.14e-19 91.7
MS.gene69837.t1 MTR_5g090670 25.284 352 202 11 110 424 133 460 1.15e-19 91.7
MS.gene69837.t1 MTR_4g117960 23.517 472 288 16 1 419 4 455 1.61e-19 91.3
MS.gene69837.t1 MTR_7g070930 23.312 459 297 16 7 419 13 462 1.75e-19 91.3
MS.gene69837.t1 MTR_3g479520 23.218 491 303 19 8 445 15 484 1.75e-19 90.9
MS.gene69837.t1 MTR_2g035020 24.115 452 290 18 1 408 4 446 2.01e-19 90.9
MS.gene69837.t1 MTR_5g067170 32.105 190 113 5 244 419 267 454 2.29e-19 90.9
MS.gene69837.t1 MTR_0891s0010 27.273 253 157 8 207 445 52 291 2.39e-19 88.6
MS.gene69837.t1 MTR_5g090660 27.799 259 150 8 201 424 200 456 2.54e-19 90.9
MS.gene69837.t1 MTR_5g090630 26.871 294 178 9 152 424 172 449 2.55e-19 90.5
MS.gene69837.t1 MTR_3g069710 31.518 257 161 9 196 443 204 454 3.15e-19 90.1
MS.gene69837.t1 MTR_4g094920 29.208 202 134 6 245 440 281 479 3.77e-19 90.1
MS.gene69837.t1 MTR_4g128720 25.285 439 267 17 7 411 14 425 4.04e-19 89.7
MS.gene69837.t1 MTR_5g019580 29.771 262 155 7 170 413 223 473 4.59e-19 90.1
MS.gene69837.t1 MTR_3g084540 30.208 192 121 5 245 429 272 457 5.28e-19 89.7
MS.gene69837.t1 MTR_1g107380 31.304 230 132 10 206 420 230 448 5.68e-19 89.4
MS.gene69837.t1 MTR_6g035265 23.355 471 283 19 1 419 4 448 5.70e-19 89.4
MS.gene69837.t1 MTR_5g090620 27.459 244 146 6 210 424 218 459 6.06e-19 89.4
MS.gene69837.t1 MTR_5g019580 29.771 262 155 7 170 413 199 449 6.35e-19 89.4
MS.gene69837.t1 MTR_3g084520 31.461 178 109 5 245 415 272 443 9.87e-19 88.6
MS.gene69837.t1 MTR_8g088560 30.769 208 132 7 238 441 259 458 1.02e-18 88.6
MS.gene69837.t1 MTR_3g479610 28.641 206 129 6 245 445 122 314 1.12e-18 87.0
MS.gene69837.t1 MTR_4g095008 29.670 182 119 6 245 422 266 442 1.12e-18 89.0
MS.gene69837.t1 MTR_0536s0020 24.026 462 261 17 7 410 17 446 1.17e-18 88.6
MS.gene69837.t1 MTR_3g084530 32.022 178 108 5 245 415 272 443 1.20e-18 88.6
MS.gene69837.t1 MTR_8g044140 23.724 392 255 12 49 402 22 407 1.20e-18 88.6
MS.gene69837.t1 MTR_8g064870 24.183 459 288 15 6 421 9 450 1.21e-18 88.6
MS.gene69837.t1 MTR_6g014220 24.783 460 285 15 8 421 10 454 1.23e-18 88.6
MS.gene69837.t1 MTR_1g107360 25.111 450 285 15 6 421 7 438 1.79e-18 87.8
MS.gene69837.t1 MTR_4g117890 24.405 504 277 21 7 442 12 479 3.15e-18 87.4
MS.gene69837.t1 MTR_6g033660 31.977 172 111 4 245 414 266 433 3.44e-18 87.0
MS.gene69837.t1 MTR_5g070040 29.710 276 165 12 152 414 184 443 5.53e-18 86.3
MS.gene69837.t1 MTR_7g080935 23.744 438 291 12 7 420 10 428 7.04e-18 85.9
MS.gene69837.t1 MTR_7g080940 30.769 182 115 5 239 420 258 428 9.43e-18 85.5
MS.gene69837.t1 MTR_8g059425 28.163 245 140 11 196 421 227 454 1.17e-17 85.5
MS.gene69837.t1 MTR_6g038300 31.579 171 107 5 245 415 266 426 1.20e-17 85.5
MS.gene69837.t1 MTR_6g013900 32.432 185 111 6 239 421 283 455 1.26e-17 85.5
MS.gene69837.t1 MTR_5g045960 24.939 409 268 15 7 380 8 412 1.59e-17 85.1
MS.gene69837.t1 MTR_6g014250 24.464 466 281 20 8 422 10 455 2.78e-17 84.3
MS.gene69837.t1 MTR_5g016480 28.358 201 138 5 245 442 275 472 2.80e-17 84.3
MS.gene69837.t1 MTR_7g080950 31.319 182 114 6 239 420 253 423 2.91e-17 84.3
MS.gene69837.t1 MTR_4g128690 30.864 243 150 9 196 434 216 444 3.23e-17 84.0
MS.gene69837.t1 MTR_4g008630 25.984 254 170 7 185 423 191 441 3.53e-17 84.0
MS.gene69837.t1 MTR_0288s0020 30.303 231 133 8 196 421 230 437 3.57e-17 84.0
MS.gene69837.t1 MTR_6g014170 24.401 459 294 15 8 432 10 449 3.63e-17 84.0
MS.gene69837.t1 MTR_5g029800 29.744 195 112 5 244 414 265 458 3.67e-17 84.0
MS.gene69837.t1 MTR_2g035040 30.168 179 110 4 244 408 174 351 3.84e-17 83.2
MS.gene69837.t1 MTR_5g090580 25.448 279 167 8 201 444 202 474 4.04e-17 84.0
MS.gene69837.t1 MTR_6g014020 31.694 183 115 5 239 421 284 456 4.27e-17 84.0
MS.gene69837.t1 MTR_7g071050 23.624 436 277 17 7 419 12 414 4.74e-17 83.2
MS.gene69837.t1 MTR_3g479490 28.814 177 117 4 245 421 283 450 6.08e-17 83.2
MS.gene69837.t1 MTR_6g013990 29.508 183 119 5 239 421 282 454 6.20e-17 83.2
MS.gene69837.t1 MTR_6g011340 28.333 240 146 9 196 421 229 456 7.21e-17 83.2
MS.gene69837.t1 MTR_5g090600 23.784 370 230 13 92 444 119 453 8.87e-17 82.8
MS.gene69837.t1 MTR_7g011470 31.892 185 112 6 239 421 270 442 9.17e-17 82.8
MS.gene69837.t1 MTR_1g107375 29.614 233 132 9 205 421 214 430 9.20e-17 82.8
MS.gene69837.t1 MTR_7g011470 31.892 185 112 6 239 421 266 438 9.45e-17 82.8
MS.gene69837.t1 MTR_5g058320 24.190 463 277 20 5 421 7 441 9.91e-17 82.4
MS.gene69837.t1 MTR_6g014190 30.612 196 122 6 239 432 91 274 1.25e-16 80.5
MS.gene69837.t1 MTR_7g070870 22.750 400 281 12 4 380 15 409 1.63e-16 82.0
MS.gene69837.t1 MTR_7g012120 29.775 178 110 4 245 408 272 448 2.02e-16 81.6
MS.gene69837.t1 MTR_3g031400 26.549 226 140 5 206 420 215 425 2.79e-16 81.3
MS.gene69837.t1 MTR_4g118000 24.661 442 263 20 6 412 10 416 3.26e-16 80.9
MS.gene69837.t1 MTR_5g027210 23.482 247 156 3 198 412 212 457 3.67e-16 80.9
MS.gene69837.t1 MTR_3g008010 32.597 181 104 7 245 421 288 454 4.59e-16 80.5
MS.gene69837.t1 MTR_7g470610 32.639 144 93 3 239 380 128 269 4.88e-16 79.0
MS.gene69837.t1 MTR_7g070583 32.639 144 93 3 239 380 128 269 4.88e-16 79.0
MS.gene69837.t1 MTR_4g108250 22.318 466 299 16 7 422 10 462 5.70e-16 80.5
MS.gene69837.t1 MTR_1g032490 34.839 155 94 4 245 396 273 423 5.98e-16 80.1
MS.gene69837.t1 MTR_6g014270 22.747 466 291 16 8 421 7 455 7.39e-16 80.1
MS.gene69837.t1 MTR_8g032950 29.016 193 118 6 245 421 268 457 9.30e-16 79.7
MS.gene69837.t1 MTR_3g031450 24.783 230 143 5 206 420 213 427 1.32e-15 79.3
MS.gene69837.t1 MTR_8g090095 26.437 261 170 8 195 436 218 475 1.32e-15 79.3
MS.gene69837.t1 MTR_6g014200 29.508 183 119 5 239 421 281 453 1.75e-15 79.0
MS.gene69837.t1 MTR_5g040030 25.830 271 166 9 201 445 224 485 2.33e-15 78.6
MS.gene69837.t1 MTR_7g070860 21.681 452 295 13 7 419 6 437 2.76e-15 78.2
MS.gene69837.t1 MTR_6g014050 29.412 204 130 6 239 440 285 476 3.05e-15 78.2
MS.gene69837.t1 MTR_8g007585 30.508 177 113 5 245 421 202 368 3.29e-15 77.4
MS.gene69837.t1 MTR_6g014310 28.216 241 145 9 196 421 230 457 3.58e-15 77.8
MS.gene69837.t1 MTR_1g107285 28.448 232 138 8 205 421 222 440 3.61e-15 77.8
MS.gene69837.t1 MTR_8g056740 25.108 231 159 5 196 416 111 337 3.69e-15 77.4
MS.gene69837.t1 MTR_6g013920 27.160 243 144 10 196 413 228 462 4.33e-15 77.4
MS.gene69837.t1 MTR_1g029540 25.306 245 161 7 195 423 200 438 5.35e-15 77.0
MS.gene69837.t1 MTR_5g072860 22.296 453 293 15 8 425 18 446 6.10e-15 77.0
MS.gene69837.t1 MTR_6g014187 23.602 483 302 19 8 440 10 475 6.21e-15 77.0
MS.gene69837.t1 MTR_5g004940 37.391 115 70 2 245 358 199 312 1.17e-14 75.9
MS.gene69837.t1 MTR_6g014040 30.055 183 118 5 239 421 285 457 1.29e-14 76.3
MS.gene69837.t1 MTR_6g013450 28.962 183 120 5 239 421 285 457 2.86e-14 75.1
MS.gene69837.t1 MTR_6g014240 28.571 182 120 5 239 420 251 422 3.92e-14 74.3
MS.gene69837.t1 MTR_6g014150 32.075 159 98 5 239 392 281 434 7.66e-14 73.6
MS.gene69837.t1 MTR_5g072810 24.336 226 149 5 205 420 216 429 1.31e-13 72.8
MS.gene69837.t1 MTR_5g464810 28.079 203 129 6 245 445 288 475 1.37e-13 72.8
MS.gene69837.t1 MTR_5g064240 28.079 203 129 6 245 445 288 475 1.37e-13 72.8
MS.gene69837.t1 MTR_1g040310 22.197 446 286 15 7 412 14 438 1.38e-13 73.2
MS.gene69837.t1 MTR_5g072820 24.481 241 154 6 193 420 199 424 1.64e-13 72.4
MS.gene69837.t1 MTR_6g014290 28.649 185 118 6 239 421 282 454 1.88e-13 72.4
MS.gene69837.t1 MTR_6g013960 22.009 468 312 13 8 432 10 467 2.20e-13 72.4
MS.gene69837.t1 MTR_7g080900 29.825 171 110 5 245 415 266 426 8.70e-13 70.5
MS.gene69837.t1 MTR_4g064987 25.113 442 257 20 3 414 12 409 9.49e-13 70.1
MS.gene69837.t1 MTR_0036s0220 27.174 184 123 5 239 422 282 454 1.05e-12 70.1
MS.gene69837.t1 MTR_2086s0010 27.389 157 105 4 265 421 1 148 1.07e-12 66.6
MS.gene69837.t1 MTR_1996s0010 27.389 157 105 4 265 421 1 148 1.07e-12 66.6
MS.gene69837.t1 MTR_4g064987 24.773 440 255 19 3 414 12 403 1.21e-12 69.7
MS.gene69837.t1 MTR_5g072830 23.451 226 151 5 205 420 211 424 1.35e-12 69.7
MS.gene69837.t1 MTR_5g072840 21.591 440 293 14 8 420 10 424 3.48e-12 68.6
MS.gene69837.t1 MTR_7g039550 26.316 266 159 10 206 445 5 259 4.51e-12 66.6
MS.gene69837.t1 MTR_5g031830 29.655 145 96 4 238 381 276 415 5.15e-12 68.2
MS.gene69837.t1 MTR_8g009840 31.073 177 100 5 260 421 333 502 6.59e-12 67.8
MS.gene69837.t1 MTR_6g078320 23.267 404 219 13 8 347 11 387 8.90e-12 67.4
MS.gene69837.t1 MTR_6g014300 26.752 157 105 5 265 421 296 442 1.56e-11 66.6
MS.gene69837.t1 MTR_0477s0010 29.730 185 116 6 239 421 121 293 2.69e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69837.t1 AT4G27570 44.270 445 236 6 8 444 7 447 5.35e-139 406
MS.gene69837.t1 AT5G53990 43.527 448 234 6 7 445 5 442 1.93e-137 402
MS.gene69837.t1 AT4G27560 44.045 445 237 6 8 444 7 447 1.08e-136 400
MS.gene69837.t1 AT1G64920 43.709 453 230 8 7 445 5 446 1.54e-136 400
MS.gene69837.t1 AT5G54010 42.953 447 244 5 7 445 5 448 5.76e-136 399
MS.gene69837.t1 AT4G09500 42.825 446 242 6 3 442 1 439 3.07e-134 394
MS.gene69837.t1 AT2G22930 42.953 447 244 5 3 444 1 441 5.25e-132 388
MS.gene69837.t1 AT1G64910 42.377 446 240 7 7 444 5 441 1.35e-131 387
MS.gene69837.t1 AT3G29630 42.377 446 245 4 7 445 5 445 2.83e-131 386
MS.gene69837.t1 AT5G54060 43.231 458 237 6 7 444 12 466 1.14e-130 385
MS.gene69837.t1 AT3G29630 41.761 443 226 5 7 445 5 419 5.68e-124 367
MS.gene69837.t1 AT4G09500 40.899 445 227 7 3 442 1 414 8.75e-121 358
MS.gene69837.t1 AT1G50580 40.950 442 247 6 7 441 5 439 7.81e-118 352
MS.gene69837.t1 AT2G22590 34.565 460 268 15 7 440 14 466 2.16e-69 228
MS.gene69837.t1 AT5G49690 31.390 446 271 12 7 429 9 442 9.32e-63 210
MS.gene69837.t1 AT5G65550 30.128 468 289 16 5 444 6 463 3.06e-61 206
MS.gene69837.t1 AT2G22930 38.389 211 122 2 3 209 1 207 1.08e-46 163
MS.gene69837.t1 AT2G22930 35.238 105 63 3 343 444 187 289 5.81e-13 69.7
MS.gene69837.t1 AT5G03490 27.233 459 298 13 6 444 17 459 3.08e-37 142
MS.gene69837.t1 AT5G12890 27.766 461 284 15 4 423 6 458 1.89e-36 140
MS.gene69837.t1 AT1G51210 27.064 436 271 13 8 419 20 432 7.35e-34 132
MS.gene69837.t1 AT4G36770 28.256 453 272 16 7 421 3 440 8.96e-31 124
MS.gene69837.t1 AT2G16890 27.391 460 283 20 8 431 9 453 1.20e-30 124
MS.gene69837.t1 AT1G73880 26.905 420 248 14 4 383 10 410 1.30e-30 123
MS.gene69837.t1 AT2G15480 25.773 485 308 15 2 441 4 481 2.11e-30 123
MS.gene69837.t1 AT4G34131 25.880 483 297 17 7 440 9 479 4.19e-30 122
MS.gene69837.t1 AT2G15490 26.087 483 302 18 7 441 6 481 4.61e-29 119
MS.gene69837.t1 AT2G15490 26.042 480 303 17 7 441 6 478 4.70e-29 119
MS.gene69837.t1 AT2G15480 25.214 468 300 13 2 426 4 464 4.82e-29 119
MS.gene69837.t1 AT1G10400 25.895 475 291 20 7 437 6 463 4.96e-29 119
MS.gene69837.t1 AT4G34138 26.033 484 293 15 7 442 10 476 8.69e-29 118
MS.gene69837.t1 AT2G31750 25.106 470 292 17 8 440 8 454 1.83e-28 117
MS.gene69837.t1 AT1G05675 26.398 447 271 17 8 420 6 428 2.26e-28 117
MS.gene69837.t1 AT2G36750 28.817 465 268 21 5 419 7 458 2.74e-28 117
MS.gene69837.t1 AT2G31750 25.054 467 296 17 8 440 8 454 3.63e-28 117
MS.gene69837.t1 AT1G05680 26.281 449 269 17 8 420 6 428 1.13e-27 115
MS.gene69837.t1 AT2G36800 26.623 462 282 18 6 419 10 462 1.46e-27 115
MS.gene69837.t1 AT2G36770 27.332 461 281 17 5 419 11 463 5.11e-27 113
MS.gene69837.t1 AT2G16890 27.400 427 261 19 8 398 9 422 6.09e-27 112
MS.gene69837.t1 AT4G34135 26.457 446 264 16 7 402 10 441 7.00e-27 113
MS.gene69837.t1 AT2G36780 27.155 464 278 20 5 419 11 463 2.45e-26 111
MS.gene69837.t1 AT2G18570 24.670 454 296 14 1 420 1 442 3.29e-26 110
MS.gene69837.t1 AT1G01420 27.527 465 257 19 8 421 8 443 4.88e-26 110
MS.gene69837.t1 AT1G01420 27.527 465 257 19 8 421 11 446 6.04e-26 110
MS.gene69837.t1 AT2G31790 26.269 453 266 18 8 420 8 432 7.33e-26 109
MS.gene69837.t1 AT5G14860 26.293 464 274 19 8 422 8 452 1.46e-25 109
MS.gene69837.t1 AT2G36760 27.542 472 266 19 5 419 11 463 3.19e-25 108
MS.gene69837.t1 AT4G01070 30.450 289 163 8 147 421 180 444 2.46e-24 105
MS.gene69837.t1 AT2G18560 29.804 255 152 7 187 420 104 352 4.91e-24 103
MS.gene69837.t1 AT2G43820 25.586 469 286 18 8 441 7 447 9.86e-24 103
MS.gene69837.t1 AT3G50740 25.870 460 278 19 8 421 7 449 2.02e-22 100
MS.gene69837.t1 AT4G15480 24.444 450 287 17 4 415 15 449 3.41e-22 99.4
MS.gene69837.t1 AT5G66690 25.390 449 285 17 8 420 7 441 3.47e-22 99.4
MS.gene69837.t1 AT2G30140 25.056 443 272 17 8 419 13 426 5.20e-22 98.6
MS.gene69837.t1 AT2G30140 25.508 443 269 18 8 419 13 425 6.40e-22 98.2
MS.gene69837.t1 AT4G15490 25.056 447 293 16 1 415 1 437 7.06e-22 98.2
MS.gene69837.t1 AT3G46670 27.391 460 274 22 16 445 17 446 7.99e-22 97.8
MS.gene69837.t1 AT5G26310 24.468 470 302 17 8 438 7 462 9.09e-22 97.8
MS.gene69837.t1 AT2G30150 24.204 471 307 18 4 444 6 456 1.04e-21 97.4
MS.gene69837.t1 AT3G53150 25.393 445 280 17 7 404 21 460 1.55e-21 97.4
MS.gene69837.t1 AT5G59590 29.779 272 169 11 181 445 191 447 1.82e-21 96.7
MS.gene69837.t1 AT5G59580 25.541 462 294 19 8 441 9 448 2.21e-21 96.7
MS.gene69837.t1 AT2G29730 25.513 439 283 13 7 411 4 432 2.60e-21 96.7
MS.gene69837.t1 AT1G07250 27.925 265 176 8 189 440 210 472 3.34e-21 96.3
MS.gene69837.t1 AT2G36970 28.947 228 150 6 201 423 229 449 4.21e-21 95.9
MS.gene69837.t1 AT3G53160 25.764 458 281 21 6 414 6 453 4.65e-21 95.9
MS.gene69837.t1 AT5G05880 25.055 455 280 16 1 415 1 434 3.18e-20 93.2
MS.gene69837.t1 AT4G15280 30.252 238 142 6 227 445 275 507 3.98e-20 93.2
MS.gene69837.t1 AT4G15280 30.252 238 142 6 227 445 243 475 4.14e-20 92.8
MS.gene69837.t1 AT2G30150 23.965 459 302 17 13 444 2 440 4.63e-20 92.4
MS.gene69837.t1 AT3G21760 30.151 199 119 6 234 414 258 454 9.22e-20 92.0
MS.gene69837.t1 AT1G24100 24.421 475 290 19 8 440 11 458 1.06e-19 91.7
MS.gene69837.t1 AT2G43840 29.851 201 127 5 245 441 257 447 1.14e-19 91.3
MS.gene69837.t1 AT2G43840 29.851 201 127 5 245 441 257 447 1.21e-19 91.3
MS.gene69837.t1 AT4G15260 29.358 218 132 6 245 445 144 356 1.34e-19 90.1
MS.gene69837.t1 AT1G06000 24.250 400 241 14 8 380 10 374 2.61e-19 90.1
MS.gene69837.t1 AT3G21560 25.166 453 281 17 3 415 9 443 2.97e-19 90.5
MS.gene69837.t1 AT3G21790 28.231 294 171 8 169 440 203 478 3.39e-19 90.1
MS.gene69837.t1 AT1G22360 25.216 464 279 20 8 422 10 454 3.47e-19 90.1
MS.gene69837.t1 AT1G01390 30.903 288 164 11 169 440 213 481 5.14e-19 89.7
MS.gene69837.t1 AT1G01390 30.903 288 164 11 169 440 196 464 5.17e-19 89.7
MS.gene69837.t1 AT3G11340 28.452 239 150 8 187 414 186 414 7.63e-19 89.0
MS.gene69837.t1 AT3G55700 32.039 206 123 6 232 431 246 440 1.23e-18 88.6
MS.gene69837.t1 AT3G22250 34.270 178 91 8 245 414 276 435 1.72e-18 87.8
MS.gene69837.t1 AT2G23250 24.413 426 277 17 18 420 8 411 2.14e-18 87.4
MS.gene69837.t1 AT3G21800 31.980 197 111 5 245 420 265 459 2.24e-18 87.8
MS.gene69837.t1 AT4G15500 32.961 179 110 6 245 421 269 439 2.86e-18 87.4
MS.gene69837.t1 AT3G16520 32.727 165 105 3 244 404 262 424 3.04e-18 87.0
MS.gene69837.t1 AT2G29710 33.333 186 112 7 231 411 254 432 3.25e-18 87.0
MS.gene69837.t1 AT3G16520 32.727 165 105 3 244 404 262 424 3.25e-18 87.0
MS.gene69837.t1 AT3G16520 32.727 165 105 3 244 404 262 424 3.79e-18 87.0
MS.gene69837.t1 AT4G15550 22.323 439 300 14 5 410 12 442 5.52e-18 86.7
MS.gene69837.t1 AT3G55710 33.333 189 117 5 245 431 263 444 6.35e-18 86.3
MS.gene69837.t1 AT5G05870 26.415 265 175 8 192 445 204 459 6.89e-18 86.3
MS.gene69837.t1 AT3G21750 26.141 241 156 5 222 442 232 470 1.01e-17 85.9
MS.gene69837.t1 AT5G05890 29.150 247 159 7 174 411 183 422 1.38e-17 85.1
MS.gene69837.t1 AT1G05530 26.908 249 158 7 208 438 206 448 1.59e-17 85.1
MS.gene69837.t1 AT2G23260 30.093 216 128 7 221 421 223 430 1.64e-17 85.1
MS.gene69837.t1 AT3G46680 25.169 445 290 17 8 431 9 431 1.83e-17 84.7
MS.gene69837.t1 AT1G07240 32.973 185 114 5 245 421 274 456 2.22e-17 84.7
MS.gene69837.t1 AT1G05560 27.236 246 158 7 208 438 206 445 2.42e-17 84.3
MS.gene69837.t1 AT1G05560 27.236 246 158 7 208 438 256 495 3.73e-17 84.3
MS.gene69837.t1 AT1G07260 28.384 229 152 6 222 440 245 471 4.12e-17 84.0
MS.gene69837.t1 AT4G14090 26.821 302 181 12 141 434 176 445 5.09e-17 83.6
MS.gene69837.t1 AT3G21780 28.241 216 137 5 245 444 259 472 5.77e-17 83.6
MS.gene69837.t1 AT2G29740 29.353 201 132 5 222 414 250 448 8.28e-17 82.8
MS.gene69837.t1 AT1G22360 24.784 464 269 21 8 422 10 442 1.16e-16 82.4
MS.gene69837.t1 AT2G36790 35.135 185 108 5 245 419 280 462 1.57e-16 82.0
MS.gene69837.t1 AT5G05860 27.092 251 165 8 178 420 183 423 2.53e-16 81.3
MS.gene69837.t1 AT3G46700 25.647 464 287 19 8 444 9 441 3.37e-16 80.9
MS.gene69837.t1 AT5G38010 24.843 479 280 21 8 444 10 450 1.07e-15 79.3
MS.gene69837.t1 AT1G78270 30.556 180 112 6 245 422 289 457 1.17e-15 79.3
MS.gene69837.t1 AT2G29750 31.351 185 117 6 227 403 255 437 1.31e-15 79.3
MS.gene69837.t1 AT1G22380 23.261 460 293 18 8 422 13 457 2.62e-15 78.2
MS.gene69837.t1 AT1G22400 30.337 178 114 5 245 422 291 458 1.20e-14 76.3
MS.gene69837.t1 AT2G26480 24.516 465 295 19 8 445 8 443 2.02e-14 75.5
MS.gene69837.t1 AT2G28080 24.891 229 150 7 200 410 220 444 2.67e-14 75.1
MS.gene69837.t1 AT3G02100 21.532 483 303 18 8 445 13 464 3.23e-13 71.6
MS.gene69837.t1 AT5G05900 23.810 462 290 19 1 422 1 440 6.01e-13 70.9
MS.gene69837.t1 AT1G22340 27.363 201 135 5 245 445 290 479 6.45e-13 70.9
MS.gene69837.t1 AT5G17030 26.180 233 152 8 196 422 215 433 8.89e-13 70.5
MS.gene69837.t1 AT5G17050 26.816 179 118 5 244 422 269 434 1.56e-12 69.7
MS.gene69837.t1 AT3G46720 27.619 210 128 7 239 445 250 438 8.87e-12 67.4
MS.gene69837.t1 AT5G17040 25.698 179 120 5 244 422 252 417 5.71e-11 64.7

Find 86 sgRNAs with CRISPR-Local

Find 105 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAGGAAAAGGGATTGTTTA+TGG 0.177110 2.2:-13912135 MS.gene69837:CDS
ATCACAGTTCCTCATGTTAA+TGG 0.256113 2.2:-13912873 MS.gene69837:CDS
GATTATCTACAAACTCTCTT+TGG 0.286627 2.2:-13912426 MS.gene69837:CDS
AAAGTCTCCAATACTTGATA+TGG 0.289217 2.2:-13912671 MS.gene69837:CDS
ATCCTTTCATTGAACCCTTC+AGG 0.299605 2.2:+13912159 None:intergenic
AGGAACTGTGATAGGGAAAA+AGG 0.317464 2.2:+13912884 None:intergenic
GGGTTCAATGAAAGGATAAA+AGG 0.342906 2.2:-13912153 MS.gene69837:CDS
TTACTTGGTCTTGAATTAAC+AGG 0.344148 2.2:-13912243 MS.gene69837:CDS
GTTCAATATCCTTCTCAGTT+TGG 0.347676 2.2:+13912778 None:intergenic
AAGGGATTGTTTATGGAAGC+TGG 0.359772 2.2:-13912128 MS.gene69837:CDS
TTAACATGAGGAACTGTGAT+AGG 0.364501 2.2:+13912876 None:intergenic
GTGGTTTCATAAAATTTCTA+AGG 0.376324 2.2:+13912628 None:intergenic
GCAGCACTTAAGCCACCTAT+TGG 0.380205 2.2:-13912207 MS.gene69837:CDS
CAATTTCAAGAGTTGTTACT+TGG 0.383502 2.2:-13912258 MS.gene69837:CDS
GGCTTAAGTGCTGCAAGAAA+TGG 0.387827 2.2:+13912216 None:intergenic
TTGTTAGAGAGACGGAGAAA+TGG 0.391956 2.2:+13912999 None:intergenic
TCAATTGACTCAAATCCAAT+AGG 0.400322 2.2:+13912192 None:intergenic
AAAATGGGAATCATGGCTTA+AGG 0.418141 2.2:-13912343 MS.gene69837:CDS
TCAGCAAGGAAACTAGAGTT+TGG 0.421736 2.2:-13912546 MS.gene69837:CDS
AAAGGTTGCAGAGAAATAGA+TGG 0.423843 2.2:-13912459 MS.gene69837:CDS
AAATCAAAGAAAACTATTTG+TGG 0.424765 2.2:+13912735 None:intergenic
CACGTGGCAAGAACACTAAC+TGG 0.434424 2.2:+13912010 None:intergenic
AGAGGACCTGAAAGTAAAAC+AGG 0.437002 2.2:+13912399 None:intergenic
TCTGTGGTTTATTGTGCATA+TGG 0.439244 2.2:-13912306 MS.gene69837:CDS
AATGAAAGGATAAAAGGAAA+AGG 0.439943 2.2:-13912147 MS.gene69837:CDS
GCTAACAAGTCCCTCAGTTA+TGG 0.440101 2.2:+13912038 None:intergenic
AATAAGAGGGAATAAAGAAA+AGG 0.449142 2.2:+13912815 None:intergenic
AGGTAATAAGATTTGGATGA+AGG 0.449694 2.2:+13912904 None:intergenic
TTGGATTCCATATCAAGTAT+TGG 0.453859 2.2:+13912664 None:intergenic
AATGTTTCCATGGTTTGCTA+TGG 0.456397 2.2:-13913033 MS.gene69837:CDS
TCTAACAAATTAGCAATAAG+AGG 0.459115 2.2:-13912984 MS.gene69837:CDS
ATCCTTCTCAGTTTGGTCCA+TGG 0.459407 2.2:+13912785 None:intergenic
TCCATGGCTGTAGCAATAAG+AGG 0.461979 2.2:+13912801 None:intergenic
ATGAAAGGATAAAAGGAAAA+GGG 0.462020 2.2:-13912146 MS.gene69837:CDS
ATTCTAGAACACCCTTCTGT+TGG 0.466558 2.2:-13912090 MS.gene69837:CDS
TTGAAGAAGCTTTACCTGAA+GGG 0.470265 2.2:-13912173 MS.gene69837:CDS
AAATGGGAATCATGGCTTAA+GGG 0.478566 2.2:-13912342 MS.gene69837:CDS
ATTGAGAAAGGTGATGAAGA+TGG 0.482932 2.2:-13911925 MS.gene69837:CDS
CTAAGGTAAGCTGTTAACAT+TGG 0.486976 2.2:+13912645 None:intergenic
TACCTGAAGGGTTCAATGAA+AGG 0.490078 2.2:-13912161 MS.gene69837:CDS
TGAAACTTGATGCATGGATC+AGG 0.495689 2.2:+13912594 None:intergenic
CCCTCTTATTGCTACAGCCA+TGG 0.498844 2.2:-13912802 MS.gene69837:CDS
TCAGATGCAGTTGCTTTCAA+AGG 0.503016 2.2:-13912477 MS.gene69837:CDS
ATAAGAGGGAATAAAGAAAA+GGG 0.503468 2.2:+13912816 None:intergenic
ATGTTTCCATGGTTTGCTAT+GGG 0.504571 2.2:-13913032 MS.gene69837:CDS
TGCACATAGCAATGTTTCCA+TGG 0.504753 2.2:-13913043 MS.gene69837:CDS
TTTGGTGGCTCAGGTAAAAG+AGG 0.512418 2.2:+13912381 None:intergenic
CTAGTTTCCTTGCTGAAGCT+AGG 0.529748 2.2:+13912553 None:intergenic
ATTGAAGAAGCTTTACCTGA+AGG 0.539878 2.2:-13912174 MS.gene69837:CDS
ATGGATGAAAGGAATGAGGT+TGG 0.543415 2.2:-13911859 MS.gene69837:CDS
TTGCTAATTTGTTAGAGAGA+CGG 0.544788 2.2:+13912991 None:intergenic
GTGTACGATCGAGTTGACAT+AGG 0.544884 2.2:-13912510 MS.gene69837:CDS
GGGATTCAAGCATGGTTCTG+TGG 0.547152 2.2:-13912322 MS.gene69837:CDS
TAACATGAGGAACTGTGATA+GGG 0.557835 2.2:+13912877 None:intergenic
TATTGTGCATATGGAAGTGA+AGG 0.565062 2.2:-13912297 MS.gene69837:CDS
TTGAGAAAGGTGATGAAGAT+GGG 0.567076 2.2:-13911924 MS.gene69837:CDS
ATTGCTATGTGCAAAGGAGG+AGG 0.567284 2.2:+13913053 None:intergenic
GTTGGAGTGGAAATTGAGAA+AGG 0.576091 2.2:-13911937 MS.gene69837:CDS
ATGAGGTTGGAAGAGAAGTG+AGG 0.579525 2.2:-13911846 MS.gene69837:CDS
TGAAGATTGTGATGGATGAA+AGG 0.583116 2.2:-13911870 MS.gene69837:CDS
GGATATTGAACTTCTTCTGA+CGG 0.585116 2.2:-13912766 MS.gene69837:CDS
GTTATGAAACATCCAACAGA+AGG 0.588945 2.2:+13912078 None:intergenic
AACATTGCTATGTGCAAAGG+AGG 0.593375 2.2:+13913050 None:intergenic
TAGTTTCAGCATCATGAGGA+AGG 0.594193 2.2:+13912850 None:intergenic
ACAGAAACTATCAACACAAG+AGG 0.595546 2.2:+13911774 None:intergenic
ATTGACTCAAATCCAATAGG+TGG 0.595901 2.2:+13912195 None:intergenic
CATGGATCAGGCAACCCTGA+AGG 0.598509 2.2:+13912606 None:intergenic
GGATGTTTCATAACACATTG+TGG 0.601065 2.2:-13912069 MS.gene69837:CDS
GGAAACATTGCTATGTGCAA+AGG 0.601320 2.2:+13913047 None:intergenic
TTCTGTTCCTAGCTTCAGCA+AGG 0.604406 2.2:-13912560 MS.gene69837:CDS
TGGCTTAAGGGATTCAAGCA+TGG 0.607527 2.2:-13912330 MS.gene69837:CDS
TGTGATGGATGAAAGGAATG+AGG 0.626152 2.2:-13911863 MS.gene69837:CDS
AGGAAACTAGAGTTTGGCAG+TGG 0.630184 2.2:-13912540 MS.gene69837:CDS
CAAAGGAGGAGGAAGATCCA+TGG 0.630563 2.2:+13913064 None:intergenic
TGTGAATGAAACTTGATGCA+TGG 0.631614 2.2:+13912588 None:intergenic
CCATGGCTGTAGCAATAAGA+GGG 0.634014 2.2:+13912802 None:intergenic
TGGAGCTGCTTCCATAACTG+AGG 0.634939 2.2:-13912049 MS.gene69837:CDS
GGATCAGGCAACCCTGAAGG+TGG 0.641702 2.2:+13912609 None:intergenic
AGCCATGGACCAAACTGAGA+AGG 0.645399 2.2:-13912787 MS.gene69837:CDS
GGAGCTGCTTCCATAACTGA+GGG 0.647559 2.2:-13912048 MS.gene69837:CDS
CAAAGCTGTGAAGATTGTGA+TGG 0.655994 2.2:-13911878 MS.gene69837:CDS
AAGTGTCCCATAGCAAACCA+TGG 0.661811 2.2:+13913026 None:intergenic
GAAGTAGTTTCAGCATCATG+AGG 0.663497 2.2:+13912846 None:intergenic
TGAGGAAGGCCATTAACATG+AGG 0.680750 2.2:+13912864 None:intergenic
TTATGAAACATCCAACAGAA+GGG 0.698749 2.2:+13912079 None:intergenic
ATATGATCAGAACTTACACG+TGG 0.771040 2.2:+13911994 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTCTTTGATTTTCAATAT+TGG - chr2.2:13912084-13912103 MS.gene69837:CDS 15.0%
!! AAACTACTTTAGATGAAAAA+TGG - chr2.2:13912450-13912469 MS.gene69837:CDS 20.0%
!! AAATCAAAGAAAACTATTTG+TGG + chr2.2:13912077-13912096 None:intergenic 20.0%
!! AACTACTTTAGATGAAAAAT+GGG - chr2.2:13912451-13912470 MS.gene69837:CDS 20.0%
!! GGAAAAATCATAATGAATTA+AGG - chr2.2:13912984-13913003 MS.gene69837:CDS 20.0%
!!! TGAAATTGATTTTGTTCTAA+TGG + chr2.2:13912539-13912558 None:intergenic 20.0%
!!! TTTTCATCTAAAGTAGTTTT+TGG + chr2.2:13912449-13912468 None:intergenic 20.0%
! AATAAGAGGGAATAAAGAAA+AGG + chr2.2:13911997-13912016 None:intergenic 25.0%
! AATGAAAGGATAAAAGGAAA+AGG - chr2.2:13912662-13912681 MS.gene69837:CDS 25.0%
! ATAAGAGGGAATAAAGAAAA+GGG + chr2.2:13911996-13912015 None:intergenic 25.0%
! ATGAAAGGATAAAAGGAAAA+GGG - chr2.2:13912663-13912682 MS.gene69837:CDS 25.0%
! GTGGTTTCATAAAATTTCTA+AGG + chr2.2:13912184-13912203 None:intergenic 25.0%
! TCTAACAAATTAGCAATAAG+AGG - chr2.2:13911825-13911844 MS.gene69837:CDS 25.0%
!! ATGAGCAAAAAGTTTAAAGT+TGG - chr2.2:13912854-13912873 MS.gene69837:CDS 25.0%
AAAGGAAAAGGGATTGTTTA+TGG - chr2.2:13912674-13912693 MS.gene69837:CDS 30.0%
AAAGTCTCCAATACTTGATA+TGG - chr2.2:13912138-13912157 MS.gene69837:CDS 30.0%
AGGTAATAAGATTTGGATGA+AGG + chr2.2:13911908-13911927 None:intergenic 30.0%
CAATTTCAAGAGTTGTTACT+TGG - chr2.2:13912551-13912570 MS.gene69837:CDS 30.0%
GATTATCTACAAACTCTCTT+TGG - chr2.2:13912383-13912402 MS.gene69837:CDS 30.0%
GGGAAAAAGGTAATAAGATT+TGG + chr2.2:13911915-13911934 None:intergenic 30.0%
TAGATGAAAAATGGGAATCA+TGG - chr2.2:13912459-13912478 MS.gene69837:CDS 30.0%
TTATGAAACATCCAACAGAA+GGG + chr2.2:13912733-13912752 None:intergenic 30.0%
TTGGATTCCATATCAAGTAT+TGG + chr2.2:13912148-13912167 None:intergenic 30.0%
! AATTTTATGAAACCACCTTC+AGG - chr2.2:13912188-13912207 MS.gene69837:CDS 30.0%
! ATTTTATGAAACCACCTTCA+GGG - chr2.2:13912189-13912208 MS.gene69837:CDS 30.0%
! CAAAAAGTTTAAAGTTGGAG+TGG - chr2.2:13912859-13912878 MS.gene69837:CDS 30.0%
! TCAATTGACTCAAATCCAAT+AGG + chr2.2:13912620-13912639 None:intergenic 30.0%
!! ACTTGTTGAGTGTGTTTTTA+GGG + chr2.2:13911872-13911891 None:intergenic 30.0%
!! TCATCTAAAGTAGTTTTTGG+TGG + chr2.2:13912446-13912465 None:intergenic 30.0%
!! TTACTTGGTCTTGAATTAAC+AGG - chr2.2:13912566-13912585 MS.gene69837:CDS 30.0%
!! TTGCTAATTTGTTAGAGAGA+CGG + chr2.2:13911821-13911840 None:intergenic 30.0%
!!! AACTTGTTGAGTGTGTTTTT+AGG + chr2.2:13911873-13911892 None:intergenic 30.0%
AAAATGGGAATCATGGCTTA+AGG - chr2.2:13912466-13912485 MS.gene69837:CDS 35.0%
AAAGGTTGCAGAGAAATAGA+TGG - chr2.2:13912350-13912369 MS.gene69837:CDS 35.0%
AAATGGGAATCATGGCTTAA+GGG - chr2.2:13912467-13912486 MS.gene69837:CDS 35.0%
ACAGAAACTATCAACACAAG+AGG + chr2.2:13913038-13913057 None:intergenic 35.0%
ATATGATCAGAACTTACACG+TGG + chr2.2:13912818-13912837 None:intergenic 35.0%
ATCACAGTTCCTCATGTTAA+TGG - chr2.2:13911936-13911955 MS.gene69837:CDS 35.0%
ATTGAAGAAGCTTTACCTGA+AGG - chr2.2:13912635-13912654 MS.gene69837:CDS 35.0%
ATTGAGAAAGGTGATGAAGA+TGG - chr2.2:13912884-13912903 MS.gene69837:CDS 35.0%
CTAAGGTAAGCTGTTAACAT+TGG + chr2.2:13912167-13912186 None:intergenic 35.0%
GGATATTGAACTTCTTCTGA+CGG - chr2.2:13912043-13912062 MS.gene69837:CDS 35.0%
GGATGTTTCATAACACATTG+TGG - chr2.2:13912740-13912759 MS.gene69837:CDS 35.0%
GGGTTCAATGAAAGGATAAA+AGG - chr2.2:13912656-13912675 MS.gene69837:CDS 35.0%
GTTATGAAACATCCAACAGA+AGG + chr2.2:13912734-13912753 None:intergenic 35.0%
GTTCAATATCCTTCTCAGTT+TGG + chr2.2:13912034-13912053 None:intergenic 35.0%
TAACATGAGGAACTGTGATA+GGG + chr2.2:13911935-13911954 None:intergenic 35.0%
TATTGTGCATATGGAAGTGA+AGG - chr2.2:13912512-13912531 MS.gene69837:CDS 35.0%
TCTGTGGTTTATTGTGCATA+TGG - chr2.2:13912503-13912522 MS.gene69837:CDS 35.0%
TGTGAATGAAACTTGATGCA+TGG + chr2.2:13912224-13912243 None:intergenic 35.0%
TTAACATGAGGAACTGTGAT+AGG + chr2.2:13911936-13911955 None:intergenic 35.0%
TTGAAGAAGCTTTACCTGAA+GGG - chr2.2:13912636-13912655 MS.gene69837:CDS 35.0%
TTGAGAAAGGTGATGAAGAT+GGG - chr2.2:13912885-13912904 MS.gene69837:CDS 35.0%
! ATTGACTCAAATCCAATAGG+TGG + chr2.2:13912617-13912636 None:intergenic 35.0%
! GGAAAACCTGTTTTACTTTC+AGG - chr2.2:13912404-13912423 MS.gene69837:CDS 35.0%
!! AATGTTTCCATGGTTTGCTA+TGG - chr2.2:13911776-13911795 MS.gene69837:CDS 35.0%
!! ATGTTTCCATGGTTTGCTAT+GGG - chr2.2:13911777-13911796 MS.gene69837:CDS 35.0%
!! TGAAGATTGTGATGGATGAA+AGG - chr2.2:13912939-13912958 MS.gene69837:CDS 35.0%
AACATTGCTATGTGCAAAGG+AGG + chr2.2:13911762-13911781 None:intergenic 40.0%
AAGGGATTGTTTATGGAAGC+TGG - chr2.2:13912681-13912700 MS.gene69837:CDS 40.0%
AGAGGACCTGAAAGTAAAAC+AGG + chr2.2:13912413-13912432 None:intergenic 40.0%
AGGAACTGTGATAGGGAAAA+AGG + chr2.2:13911928-13911947 None:intergenic 40.0%
ATCCTTTCATTGAACCCTTC+AGG + chr2.2:13912653-13912672 None:intergenic 40.0%
ATGGATGAAAGGAATGAGGT+TGG - chr2.2:13912950-13912969 MS.gene69837:CDS 40.0%
CAAAGCTGTGAAGATTGTGA+TGG - chr2.2:13912931-13912950 MS.gene69837:CDS 40.0%
CCAAACCTGACTCAAAAACT+TGG - chr2.2:13912110-13912129 MS.gene69837:CDS 40.0%
GAAGTAGTTTCAGCATCATG+AGG + chr2.2:13911966-13911985 None:intergenic 40.0%
GGAAACATTGCTATGTGCAA+AGG + chr2.2:13911765-13911784 None:intergenic 40.0%
GTTGGAGTGGAAATTGAGAA+AGG - chr2.2:13912872-13912891 MS.gene69837:CDS 40.0%
TACCTGAAGGGTTCAATGAA+AGG - chr2.2:13912648-13912667 MS.gene69837:CDS 40.0%
TAGTTTCAGCATCATGAGGA+AGG + chr2.2:13911962-13911981 None:intergenic 40.0%
TCAGCAAGGAAACTAGAGTT+TGG - chr2.2:13912263-13912282 MS.gene69837:CDS 40.0%
TGAAACTTGATGCATGGATC+AGG + chr2.2:13912218-13912237 None:intergenic 40.0%
TGCACATAGCAATGTTTCCA+TGG - chr2.2:13911766-13911785 MS.gene69837:CDS 40.0%
TTGTTAGAGAGACGGAGAAA+TGG + chr2.2:13911813-13911832 None:intergenic 40.0%
! TCAGATGCAGTTGCTTTCAA+AGG - chr2.2:13912332-13912351 MS.gene69837:CDS 40.0%
!! ATTCTAGAACACCCTTCTGT+TGG - chr2.2:13912719-13912738 MS.gene69837:CDS 40.0%
!! TGTGATGGATGAAAGGAATG+AGG - chr2.2:13912946-13912965 MS.gene69837:CDS 40.0%
!!! AAAGTAGTTTTTGGTGGCTC+AGG + chr2.2:13912440-13912459 None:intergenic 40.0%
!!! CCAAGTTTTTGAGTCAGGTT+TGG + chr2.2:13912113-13912132 None:intergenic 40.0%
!!! TGATGCCAAGTTTTTGAGTC+AGG + chr2.2:13912118-13912137 None:intergenic 40.0%
AAGTGTCCCATAGCAAACCA+TGG + chr2.2:13911786-13911805 None:intergenic 45.0%
AGGAAACTAGAGTTTGGCAG+TGG - chr2.2:13912269-13912288 MS.gene69837:CDS 45.0%
ATCCTTCTCAGTTTGGTCCA+TGG + chr2.2:13912027-13912046 None:intergenic 45.0%
ATGAGGTTGGAAGAGAAGTG+AGG - chr2.2:13912963-13912982 MS.gene69837:CDS 45.0%
ATTGCTATGTGCAAAGGAGG+AGG + chr2.2:13911759-13911778 None:intergenic 45.0%
CCATGGCTGTAGCAATAAGA+GGG + chr2.2:13912010-13912029 None:intergenic 45.0%
CTAGTTTCCTTGCTGAAGCT+AGG + chr2.2:13912259-13912278 None:intergenic 45.0%
GCTAACAAGTCCCTCAGTTA+TGG + chr2.2:13912774-13912793 None:intergenic 45.0%
TCCATGGCTGTAGCAATAAG+AGG + chr2.2:13912011-13912030 None:intergenic 45.0%
TGAGGAAGGCCATTAACATG+AGG + chr2.2:13911948-13911967 None:intergenic 45.0%
TGGCTTAAGGGATTCAAGCA+TGG - chr2.2:13912479-13912498 MS.gene69837:CDS 45.0%
TTCTGTTCCTAGCTTCAGCA+AGG - chr2.2:13912249-13912268 MS.gene69837:CDS 45.0%
! GGCTTAAGTGCTGCAAGAAA+TGG + chr2.2:13912596-13912615 None:intergenic 45.0%
! TTTGGTGGCTCAGGTAAAAG+AGG + chr2.2:13912431-13912450 None:intergenic 45.0%
!! GTGTACGATCGAGTTGACAT+AGG - chr2.2:13912299-13912318 MS.gene69837:CDS 45.0%
AGCCATGGACCAAACTGAGA+AGG - chr2.2:13912022-13912041 MS.gene69837:CDS 50.0%
CACGTGGCAAGAACACTAAC+TGG + chr2.2:13912802-13912821 None:intergenic 50.0%
CCCTCTTATTGCTACAGCCA+TGG - chr2.2:13912007-13912026 MS.gene69837:CDS 50.0%
GCAGCACTTAAGCCACCTAT+TGG - chr2.2:13912602-13912621 MS.gene69837:CDS 50.0%
GGAGCTGCTTCCATAACTGA+GGG - chr2.2:13912761-13912780 MS.gene69837:CDS 50.0%
TGGAGCTGCTTCCATAACTG+AGG - chr2.2:13912760-13912779 MS.gene69837:CDS 50.0%
! GGGATTCAAGCATGGTTCTG+TGG - chr2.2:13912487-13912506 MS.gene69837:CDS 50.0%
CATGGATCAGGCAACCCTGA+AGG + chr2.2:13912206-13912225 None:intergenic 55.0%
GGATCAGGCAACCCTGAAGG+TGG + chr2.2:13912203-13912222 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 13911747 13913084 13911747 ID=MS.gene69837
chr2.2 mRNA 13911747 13913084 13911747 ID=MS.gene69837.t1;Parent=MS.gene69837
chr2.2 exon 13911747 13913084 13911747 ID=MS.gene69837.t1.exon1;Parent=MS.gene69837.t1
chr2.2 CDS 13911747 13913084 13911747 ID=cds.MS.gene69837.t1;Parent=MS.gene69837.t1
Gene Sequence

>MS.gene69837

ATGGATCTTCCTCCTCCTTTGCACATAGCAATGTTTCCATGGTTTGCTATGGGACACTTAACTCCATTTCTCCGTCTCTCTAACAAATTAGCAATAAGAGGTCACAAAATATCATTCTTCATCCCTAAAAACACACTCAACAAGTTACAACATCTCAACCTTCATCCAAATCTTATTACCTTTTTCCCTATCACAGTTCCTCATGTTAATGGCCTTCCTCATGATGCTGAAACTACTTCAGATGTGCCCTTTTCTTTATTCCCTCTTATTGCTACAGCCATGGACCAAACTGAGAAGGATATTGAACTTCTTCTGACGGAACTAAAGCCACAAATAGTTTTCTTTGATTTTCAATATTGGCTTCCAAACCTGACTCAAAAACTTGGCATCAAAAGTCTCCAATACTTGATATGGAATCCAATGTTAACAGCTTACCTTAGAAATTTTATGAAACCACCTTCAGGGTTGCCTGATCCATGCATCAAGTTTCATTCACACGAACTTCTGTTCCTAGCTTCAGCAAGGAAACTAGAGTTTGGCAGTGGTATTTTAGTGTACGATCGAGTTGACATAGGCACAAATTTTTCAGATGCAGTTGCTTTCAAAGGTTGCAGAGAAATAGATGGTTTATATGCTGATTATCTACAAACTCTCTTTGGAAAACCTGTTTTACTTTCAGGTCCTCTTTTACCTGAGCCACCAAAAACTACTTTAGATGAAAAATGGGAATCATGGCTTAAGGGATTCAAGCATGGTTCTGTGGTTTATTGTGCATATGGAAGTGAAGGTCCATTAGAACAAAATCAATTTCAAGAGTTGTTACTTGGTCTTGAATTAACAGGTTTTCCATTTCTTGCAGCACTTAAGCCACCTATTGGATTTGAGTCAATTGAAGAAGCTTTACCTGAAGGGTTCAATGAAAGGATAAAAGGAAAAGGGATTGTTTATGGAAGCTGGATTCAACAACAATTGATTCTAGAACACCCTTCTGTTGGATGTTTCATAACACATTGTGGAGCTGCTTCCATAACTGAGGGACTTGTTAGCACGTGCCAGTTAGTGTTCTTGCCACGTGTAAGTTCTGATCATATCATTAATGCAAGAATGATGAGCAAAAAGTTTAAAGTTGGAGTGGAAATTGAGAAAGGTGATGAAGATGGGTTGTTTACAAATGAAAATGTGTGCAAAGCTGTGAAGATTGTGATGGATGAAAGGAATGAGGTTGGAAGAGAAGTGAGGAAAAATCATAATGAATTAAGGAAGTTTTTATTGAGTGAGAATTTAGAGTCCTCTTGTGTTGATAGTTTCTGTGAAAAGCTTCAAGATTTGATTCATTGA

Protein sequence

>MS.gene69837.t1

MDLPPPLHIAMFPWFAMGHLTPFLRLSNKLAIRGHKISFFIPKNTLNKLQHLNLHPNLITFFPITVPHVNGLPHDAETTSDVPFSLFPLIATAMDQTEKDIELLLTELKPQIVFFDFQYWLPNLTQKLGIKSLQYLIWNPMLTAYLRNFMKPPSGLPDPCIKFHSHELLFLASARKLEFGSGILVYDRVDIGTNFSDAVAFKGCREIDGLYADYLQTLFGKPVLLSGPLLPEPPKTTLDEKWESWLKGFKHGSVVYCAYGSEGPLEQNQFQELLLGLELTGFPFLAALKPPIGFESIEEALPEGFNERIKGKGIVYGSWIQQQLILEHPSVGCFITHCGAASITEGLVSTCQLVFLPRVSSDHIINARMMSKKFKVGVEIEKGDEDGLFTNENVCKAVKIVMDERNEVGREVRKNHNELRKFLLSENLESSCVDSFCEKLQDLIH