AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene69836


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69836.t1 MTR_2g083430 96.070 458 18 0 1 458 1 458 0.0 883
MS.gene69836.t1 MTR_2g083480 77.243 457 104 0 1 457 1 457 0.0 719
MS.gene69836.t1 MTR_2g083390 73.362 458 98 1 1 458 1 434 0.0 693
MS.gene69836.t1 MTR_2g083420 73.581 458 97 1 1 458 1 434 0.0 692
MS.gene69836.t1 MTR_2g083380 68.777 458 143 0 1 458 18 475 0.0 638
MS.gene69836.t1 MTR_2g083490 68.122 458 146 0 1 458 1 458 0.0 633
MS.gene69836.t1 MTR_4g079250 58.913 460 185 3 1 458 1 458 0.0 572
MS.gene69836.t1 MTR_4g079270 58.478 460 187 3 1 458 1 458 0.0 565
MS.gene69836.t1 MTR_2g014900 55.876 451 198 1 8 458 7 456 0.0 525
MS.gene69836.t1 MTR_2g083360 58.278 453 84 4 6 458 27 374 4.52e-172 488
MS.gene69836.t1 MTR_2g086283 52.349 447 101 7 11 457 1 335 8.33e-144 415
MS.gene69836.t1 MTR_1g090270 41.558 462 248 11 7 457 14 464 1.49e-113 342
MS.gene69836.t1 MTR_4g059370 40.299 335 181 8 132 457 67 391 3.51e-78 249
MS.gene69836.t1 MTR_8g068330 32.548 467 287 14 7 456 7 462 6.97e-72 234
MS.gene69836.t1 MTR_4g123553 32.770 473 276 15 2 455 9 458 1.56e-69 228
MS.gene69836.t1 MTR_7g067330 33.043 460 256 15 7 455 8 426 9.43e-67 220
MS.gene69836.t1 MTR_2g008226 34.461 473 276 18 6 456 8 468 1.04e-66 221
MS.gene69836.t1 MTR_8g068360 31.847 471 288 16 7 458 11 467 1.83e-66 220
MS.gene69836.t1 MTR_7g067120 32.755 461 256 16 7 455 8 426 1.92e-66 219
MS.gene69836.t1 MTR_2g008225 31.602 462 291 12 6 454 13 462 1.73e-65 218
MS.gene69836.t1 MTR_8g068340 30.687 466 295 13 7 455 11 465 1.71e-63 213
MS.gene69836.t1 MTR_2g008220 31.385 462 292 12 6 454 12 461 2.81e-62 209
MS.gene69836.t1 MTR_6g036650 31.723 476 276 16 6 455 16 468 6.30e-62 209
MS.gene69836.t1 MTR_2g014930 42.612 291 85 7 17 306 9 218 5.30e-61 199
MS.gene69836.t1 MTR_6g042310 31.965 463 283 15 7 455 17 461 6.24e-60 203
MS.gene69836.t1 MTR_2g046620 30.407 467 295 14 2 455 10 459 1.44e-57 197
MS.gene69836.t1 MTR_4g079280 41.667 228 88 2 11 238 1 183 2.21e-54 180
MS.gene69836.t1 MTR_2g083440 81.373 102 19 0 357 458 11 112 1.15e-53 175
MS.gene69836.t1 MTR_8g007650 31.222 442 280 11 7 432 6 439 2.96e-50 177
MS.gene69836.t1 MTR_8g007565 30.995 442 281 11 7 432 6 439 3.72e-50 177
MS.gene69836.t1 MTR_1g090280 43.750 208 105 5 261 457 108 314 2.43e-48 168
MS.gene69836.t1 MTR_4g077960 29.130 460 280 16 17 455 1 435 6.85e-47 168
MS.gene69836.t1 MTR_5g066410 30.227 440 264 12 11 432 1 415 1.03e-45 165
MS.gene69836.t1 MTR_8g009055 28.358 469 266 16 7 435 5 443 7.55e-36 138
MS.gene69836.t1 MTR_8g009050 27.872 470 267 16 7 435 5 443 3.48e-35 136
MS.gene69836.t1 MTR_8g071070 27.731 476 307 13 8 457 7 471 5.49e-33 130
MS.gene69836.t1 MTR_8g066610 25.780 481 321 14 6 457 7 480 1.51e-32 129
MS.gene69836.t1 MTR_7g117170 26.891 476 272 15 3 435 10 452 1.87e-32 129
MS.gene69836.t1 MTR_8g027870 28.398 493 269 17 4 452 15 467 7.89e-32 127
MS.gene69836.t1 MTR_8g008990 27.754 472 267 18 7 435 5 445 9.75e-32 127
MS.gene69836.t1 MTR_5g087620 25.364 481 298 16 8 443 10 474 1.42e-31 127
MS.gene69836.t1 MTR_3g435310 36.318 201 121 4 255 455 224 417 1.85e-31 125
MS.gene69836.t1 MTR_3g435310 33.557 149 93 5 6 151 16 161 1.39e-17 85.1
MS.gene69836.t1 MTR_8g027885 28.195 493 270 17 4 452 15 467 2.54e-31 125
MS.gene69836.t1 MTR_6g023665 27.640 445 290 11 9 433 14 446 3.16e-31 125
MS.gene69836.t1 MTR_4g117980 26.105 475 277 17 6 433 9 456 4.87e-30 122
MS.gene69836.t1 MTR_4g031800 25.567 485 302 15 6 454 7 468 6.07e-30 122
MS.gene69836.t1 MTR_8g009063 26.695 472 269 17 7 436 12 448 7.22e-30 121
MS.gene69836.t1 MTR_7g013220 26.027 438 288 14 8 427 5 424 7.50e-30 121
MS.gene69836.t1 MTR_6g488280 27.191 445 292 11 9 433 7 439 8.88e-30 121
MS.gene69836.t1 MTR_0428s0010 27.191 445 292 11 9 433 7 439 8.88e-30 121
MS.gene69836.t1 MTR_6g033615 27.517 447 266 17 9 428 5 420 2.19e-29 120
MS.gene69836.t1 MTR_7g070660 24.788 472 308 16 7 444 10 468 2.38e-29 120
MS.gene69836.t1 MTR_0184s0030 32.308 260 144 7 196 425 180 437 3.30e-29 119
MS.gene69836.t1 MTR_8g009073 27.430 463 276 17 7 435 5 441 4.74e-29 119
MS.gene69836.t1 MTR_6g033625 26.593 455 274 17 9 428 5 434 1.37e-28 117
MS.gene69836.t1 MTR_0078s0060 25.482 467 282 15 7 436 5 442 1.98e-28 117
MS.gene69836.t1 MTR_0009s0240 24.678 466 324 15 8 457 7 461 2.15e-28 117
MS.gene69836.t1 MTR_7g013200 26.966 445 264 18 8 427 5 413 2.66e-28 116
MS.gene69836.t1 MTR_7g102560 26.737 475 280 16 5 433 6 458 2.86e-28 117
MS.gene69836.t1 MTR_8g465670 27.389 471 265 18 9 434 8 446 3.65e-28 117
MS.gene69836.t1 MTR_0184s0040 25.265 471 279 15 7 436 20 458 4.04e-28 116
MS.gene69836.t1 MTR_0078s0190 25.265 471 279 15 7 436 20 458 4.04e-28 116
MS.gene69836.t1 MTR_7g047030 24.520 469 281 15 8 435 6 442 7.28e-28 115
MS.gene69836.t1 MTR_7g047270 24.520 469 281 15 8 435 6 442 7.28e-28 115
MS.gene69836.t1 MTR_4g024020 26.496 468 300 18 5 436 6 465 9.51e-28 115
MS.gene69836.t1 MTR_1g062380 25.216 464 296 17 4 427 12 464 1.31e-27 115
MS.gene69836.t1 MTR_8g006730 24.944 449 301 13 8 433 6 441 1.66e-27 114
MS.gene69836.t1 MTR_7g070740 24.043 470 293 14 7 433 10 458 2.84e-27 114
MS.gene69836.t1 MTR_8g009067 26.695 472 268 17 7 435 5 441 3.36e-27 114
MS.gene69836.t1 MTR_8g012635 36.842 190 102 4 259 434 262 447 3.39e-27 114
MS.gene69836.t1 MTR_0078s0010 24.893 466 283 14 8 435 6 442 4.22e-27 113
MS.gene69836.t1 MTR_7g013180 26.498 434 272 17 8 419 5 413 5.94e-27 112
MS.gene69836.t1 MTR_2g098430 23.362 458 310 12 9 437 7 452 1.36e-26 112
MS.gene69836.t1 MTR_5g045970 27.039 466 286 18 3 427 11 463 1.47e-26 112
MS.gene69836.t1 MTR_8g006270 24.331 411 250 12 53 434 61 439 1.70e-26 112
MS.gene69836.t1 MTR_8g012730 34.389 221 126 5 228 434 69 284 2.37e-26 108
MS.gene69836.t1 MTR_1g019520 35.450 189 107 4 258 435 5 189 3.23e-26 106
MS.gene69836.t1 MTR_6g005600 28.955 335 199 9 124 436 125 442 3.54e-26 110
MS.gene69836.t1 MTR_8g009073 34.450 209 118 6 241 435 109 312 3.62e-26 108
MS.gene69836.t1 MTR_8g006220 26.013 469 282 14 9 434 7 453 3.63e-26 111
MS.gene69836.t1 MTR_8g009067 34.928 209 117 7 241 435 120 323 5.44e-26 108
MS.gene69836.t1 MTR_2g046820 36.842 209 117 6 259 457 259 462 1.06e-25 109
MS.gene69836.t1 MTR_7g055710 24.508 457 295 14 7 427 10 452 1.10e-25 109
MS.gene69836.t1 MTR_4g485590 27.007 411 238 14 8 394 9 381 1.17e-25 108
MS.gene69836.t1 MTR_7g046490 34.928 209 116 6 242 434 235 439 2.38e-25 108
MS.gene69836.t1 MTR_7g070610 23.861 461 294 15 7 427 12 455 3.46e-25 108
MS.gene69836.t1 MTR_8g012650 34.555 191 107 4 259 435 262 448 3.98e-25 107
MS.gene69836.t1 MTR_8g088560 25.971 489 283 21 7 455 9 458 4.15e-25 107
MS.gene69836.t1 MTR_4g128720 26.897 435 279 17 7 425 14 425 4.20e-25 107
MS.gene69836.t1 MTR_8g006260 32.877 219 129 8 231 436 234 447 6.11e-25 107
MS.gene69836.t1 MTR_7g102460 25.957 470 297 20 5 436 6 462 7.19e-25 107
MS.gene69836.t1 MTR_1g019510 35.450 189 107 4 258 435 256 440 7.34e-25 107
MS.gene69836.t1 MTR_8g006710 24.107 448 303 13 9 433 7 440 7.65e-25 107
MS.gene69836.t1 MTR_3g009510 35.135 185 104 3 258 429 266 447 9.27e-25 107
MS.gene69836.t1 MTR_2g034990 25.221 452 289 17 6 422 9 446 1.04e-24 107
MS.gene69836.t1 MTR_8g012630 34.737 190 106 4 259 434 206 391 1.36e-24 105
MS.gene69836.t1 MTR_8g083280 25.000 484 296 16 9 448 8 468 1.39e-24 106
MS.gene69836.t1 MTR_7g102490 26.667 465 296 19 5 433 6 461 1.62e-24 106
MS.gene69836.t1 MTR_5g067170 25.551 454 304 15 6 433 9 454 1.64e-24 106
MS.gene69836.t1 MTR_6g033725 27.252 444 284 17 9 429 5 432 2.17e-24 105
MS.gene69836.t1 MTR_4g485620 23.702 443 301 12 20 436 1 432 4.06e-24 105
MS.gene69836.t1 MTR_2g040530 34.737 190 112 4 259 438 261 448 4.85e-24 104
MS.gene69836.t1 MTR_4g485630 26.087 460 295 17 7 435 8 453 6.49e-24 104
MS.gene69836.t1 MTR_8g466240 26.118 425 261 17 1 398 1 399 6.69e-24 104
MS.gene69836.t1 MTR_4g117950 26.087 460 286 17 6 435 4 439 7.27e-24 104
MS.gene69836.t1 MTR_2g046750 35.407 209 120 6 259 457 262 465 7.31e-24 104
MS.gene69836.t1 MTR_7g070800 24.026 462 300 14 7 433 5 450 7.41e-24 104
MS.gene69836.t1 MTR_8g074550 24.375 480 291 18 6 434 6 464 9.15e-24 104
MS.gene69836.t1 MTR_5g035560 25.855 468 301 18 7 454 10 451 9.48e-24 103
MS.gene69836.t1 MTR_7g071040 23.624 436 290 12 7 413 16 437 9.92e-24 103
MS.gene69836.t1 MTR_0536s0010 25.764 458 291 13 6 436 19 454 1.14e-23 103
MS.gene69836.t1 MTR_6g038200 26.269 453 265 20 8 429 11 425 1.19e-23 103
MS.gene69836.t1 MTR_7g071050 24.667 450 269 16 7 433 12 414 1.42e-23 102
MS.gene69836.t1 MTR_6g035185 23.261 460 310 13 6 433 9 457 1.51e-23 103
MS.gene69836.t1 MTR_5g035580 25.602 457 300 15 7 448 12 443 1.52e-23 103
MS.gene69836.t1 MTR_8g008970 26.068 468 276 17 7 435 5 441 5.13e-23 102
MS.gene69836.t1 MTR_8g008970 28.777 278 164 9 163 436 516 763 1.31e-18 89.4
MS.gene69836.t1 MTR_6g038230 26.652 469 275 21 8 448 11 438 6.18e-23 101
MS.gene69836.t1 MTR_1g107350 24.473 474 290 19 1 435 1 445 7.65e-23 101
MS.gene69836.t1 MTR_7g070910 23.226 465 304 14 7 433 10 459 8.95e-23 101
MS.gene69836.t1 MTR_7g013260 26.077 441 271 19 1 420 1 407 9.57e-23 100
MS.gene69836.t1 MTR_6g038220 26.509 464 281 20 8 448 11 437 1.05e-22 100
MS.gene69836.t1 MTR_0536s0020 25.157 477 281 17 2 436 12 454 1.22e-22 100
MS.gene69836.t1 MTR_8g077590 31.120 241 147 6 208 434 207 442 1.50e-22 100
MS.gene69836.t1 MTR_6g035265 24.416 471 282 16 6 433 9 448 1.78e-22 100
MS.gene69836.t1 MTR_6g033660 26.757 441 290 16 9 428 5 433 1.87e-22 100
MS.gene69836.t1 MTR_7g070810 24.667 450 303 12 7 428 8 449 2.53e-22 99.8
MS.gene69836.t1 MTR_3g049970 25.636 472 288 19 1 435 1 446 2.60e-22 99.8
MS.gene69836.t1 MTR_7g070780 23.226 465 305 13 6 433 9 458 2.90e-22 99.8
MS.gene69836.t1 MTR_2g035020 24.834 451 292 16 6 422 9 446 5.00e-22 99.0
MS.gene69836.t1 MTR_7g117405 25.214 468 290 17 8 436 12 458 5.58e-22 98.6
MS.gene69836.t1 MTR_8g064880 26.580 459 257 21 3 412 4 431 6.70e-22 98.6
MS.gene69836.t1 MTR_5g019580 33.180 217 126 6 229 427 234 449 7.35e-22 98.6
MS.gene69836.t1 MTR_5g019580 33.180 217 126 6 229 427 258 473 8.15e-22 98.6
MS.gene69836.t1 MTR_6g038240 33.333 171 103 6 259 429 266 425 8.44e-22 98.2
MS.gene69836.t1 MTR_7g102550 25.708 459 292 18 8 429 9 455 8.84e-22 98.2
MS.gene69836.t1 MTR_6g033675 24.318 440 305 13 9 429 5 435 1.02e-21 97.8
MS.gene69836.t1 MTR_1g107315 25.624 441 282 13 1 412 1 424 1.16e-21 97.8
MS.gene69836.t1 MTR_4g117890 24.400 500 304 20 2 455 7 478 1.22e-21 97.8
MS.gene69836.t1 MTR_7g070930 22.894 463 308 14 7 433 13 462 1.58e-21 97.4
MS.gene69836.t1 MTR_4g117960 24.468 470 290 18 6 433 9 455 1.64e-21 97.4
MS.gene69836.t1 MTR_4g082820 27.211 441 276 17 7 419 6 429 3.21e-21 96.3
MS.gene69836.t1 MTR_5g098930 21.529 497 308 14 7 454 4 467 5.09e-21 95.9
MS.gene69836.t1 MTR_3g069690 32.258 186 113 6 253 435 251 426 6.60e-21 95.5
MS.gene69836.t1 MTR_3g009490 37.500 160 84 5 283 429 3 159 8.90e-21 90.1
MS.gene69836.t1 MTR_8g012745 30.488 246 146 8 208 434 205 444 9.39e-21 95.1
MS.gene69836.t1 MTR_5g045960 24.733 469 294 18 7 433 8 459 1.25e-20 94.7
MS.gene69836.t1 MTR_8g032950 24.893 466 306 18 1 435 5 457 2.33e-20 94.0
MS.gene69836.t1 MTR_7g013240 25.472 424 282 15 8 420 6 406 2.68e-20 93.2
MS.gene69836.t1 MTR_2g059240 24.027 437 283 13 5 408 10 430 3.36e-20 93.2
MS.gene69836.t1 MTR_3g479520 23.849 478 312 15 8 450 15 475 3.64e-20 93.2
MS.gene69836.t1 MTR_5g090700 28.077 260 155 8 206 438 206 460 3.81e-20 93.2
MS.gene69836.t1 MTR_4g485640 23.963 434 293 13 18 427 219 639 3.93e-20 94.0
MS.gene69836.t1 MTR_4g094920 29.208 202 134 6 259 454 281 479 4.12e-20 93.2
MS.gene69836.t1 MTR_3g084530 23.810 462 288 19 8 429 6 443 5.62e-20 92.4
MS.gene69836.t1 MTR_4g082810 27.952 415 237 14 7 384 6 395 5.93e-20 92.0
MS.gene69836.t1 MTR_8g083290 33.140 172 108 5 259 429 269 434 6.40e-20 92.4
MS.gene69836.t1 MTR_4g128690 26.450 431 270 17 7 419 14 415 7.50e-20 92.0
MS.gene69836.t1 MTR_5g090660 29.204 226 137 7 234 438 233 456 8.55e-20 92.4
MS.gene69836.t1 MTR_8g064870 23.362 458 307 12 6 435 9 450 1.18e-19 91.7
MS.gene69836.t1 MTR_5g098960 36.628 172 90 8 259 426 262 418 1.28e-19 91.3
MS.gene69836.t1 MTR_5g090620 25.600 250 155 5 218 438 212 459 1.30e-19 91.7
MS.gene69836.t1 MTR_2g035040 31.844 179 107 4 258 422 174 351 1.55e-19 90.5
MS.gene69836.t1 MTR_5g029800 31.795 195 108 6 258 428 265 458 1.80e-19 91.3
MS.gene69836.t1 MTR_5g090610 28.682 258 156 9 206 438 190 444 1.93e-19 90.9
MS.gene69836.t1 MTR_5g090630 29.224 219 132 6 241 438 233 449 2.11e-19 90.9
MS.gene69836.t1 MTR_7g070860 22.609 460 295 13 7 433 6 437 2.34e-19 90.9
MS.gene69836.t1 MTR_3g069710 32.979 188 112 7 251 435 252 428 3.12e-19 90.1
MS.gene69836.t1 MTR_5g027210 26.316 247 149 4 212 426 212 457 3.59e-19 90.1
MS.gene69836.t1 MTR_7g070940 27.230 213 140 5 258 457 265 475 6.27e-19 89.4
MS.gene69836.t1 MTR_5g090670 28.054 221 134 6 241 438 242 460 7.37e-19 89.4
MS.gene69836.t1 MTR_4g095008 30.220 182 118 6 259 436 266 442 7.79e-19 89.4
MS.gene69836.t1 MTR_6g011340 24.353 464 298 17 8 435 10 456 1.07e-18 89.0
MS.gene69836.t1 MTR_8g044140 22.249 418 249 13 46 416 19 407 1.15e-18 88.6
MS.gene69836.t1 MTR_5g075440 24.733 469 290 16 1 439 1 436 1.20e-18 88.6
MS.gene69836.t1 MTR_1g032490 25.629 437 275 14 7 412 9 426 1.22e-18 88.6
MS.gene69836.t1 MTR_7g012120 31.461 178 107 4 259 422 272 448 1.26e-18 88.6
MS.gene69836.t1 MTR_1g107360 29.808 208 134 5 229 435 242 438 1.28e-18 88.6
MS.gene69836.t1 MTR_3g084540 23.444 482 305 19 8 449 6 463 2.50e-18 87.8
MS.gene69836.t1 MTR_5g016660 22.397 509 307 19 5 457 7 483 3.31e-18 87.4
MS.gene69836.t1 MTR_7g080940 30.220 182 116 5 253 434 258 428 4.95e-18 86.7
MS.gene69836.t1 MTR_7g080935 23.305 472 314 15 7 458 10 453 5.89e-18 86.3
MS.gene69836.t1 MTR_4g008630 26.141 241 163 6 209 437 204 441 7.03e-18 86.3
MS.gene69836.t1 MTR_8g090095 28.033 239 154 7 215 438 224 459 7.67e-18 86.3
MS.gene69836.t1 MTR_7g470610 27.331 311 175 11 120 409 5 285 8.72e-18 84.0
MS.gene69836.t1 MTR_7g070583 27.331 311 175 11 120 409 5 285 8.72e-18 84.0
MS.gene69836.t1 MTR_7g080950 30.769 182 115 6 253 434 253 423 9.97e-18 85.9
MS.gene69836.t1 MTR_7g102450 32.258 186 110 5 264 436 267 449 1.31e-17 85.5
MS.gene69836.t1 MTR_1g107375 31.122 196 123 5 240 435 247 430 1.39e-17 85.1
MS.gene69836.t1 MTR_3g479610 30.570 193 124 5 259 450 122 305 1.48e-17 83.6
MS.gene69836.t1 MTR_5g090580 25.769 260 161 7 206 438 204 458 1.73e-17 85.1
MS.gene69836.t1 MTR_3g084520 29.213 178 113 5 259 429 272 443 1.73e-17 85.1
MS.gene69836.t1 MTR_6g038300 30.994 171 108 5 259 429 266 426 2.05e-17 84.7
MS.gene69836.t1 MTR_6g014170 30.601 183 117 5 253 435 266 438 2.31e-17 84.7
MS.gene69836.t1 MTR_0891s0010 29.379 177 116 4 259 435 99 266 3.52e-17 82.4
MS.gene69836.t1 MTR_6g014270 22.601 469 302 17 8 435 7 455 5.32e-17 83.6
MS.gene69836.t1 MTR_6g013900 29.508 183 119 5 253 435 283 455 7.44e-17 83.2
MS.gene69836.t1 MTR_3g031450 23.556 450 281 16 8 434 18 427 1.04e-16 82.8
MS.gene69836.t1 MTR_5g004940 28.079 203 132 5 242 435 182 379 1.12e-16 82.0
MS.gene69836.t1 MTR_3g079480 29.545 176 115 4 253 428 292 458 1.24e-16 82.4
MS.gene69836.t1 MTR_8g059425 26.400 250 156 10 199 435 220 454 1.26e-16 82.4
MS.gene69836.t1 MTR_3g479490 28.249 177 118 4 259 435 283 450 1.76e-16 82.0
MS.gene69836.t1 MTR_6g013990 27.869 183 122 5 253 435 282 454 1.82e-16 82.0
MS.gene69836.t1 MTR_1g107365 31.214 173 108 4 240 412 286 447 1.89e-16 82.0
MS.gene69836.t1 MTR_6g014020 29.508 183 119 5 253 435 284 456 2.22e-16 81.6
MS.gene69836.t1 MTR_5g070040 30.918 207 126 8 236 428 240 443 2.46e-16 81.6
MS.gene69836.t1 MTR_1g107380 32.203 177 112 6 259 434 279 448 2.51e-16 81.6
MS.gene69836.t1 MTR_7g102520 31.915 188 113 5 259 436 281 463 2.65e-16 81.6
MS.gene69836.t1 MTR_5g058320 23.297 455 305 14 5 435 7 441 2.91e-16 81.3
MS.gene69836.t1 MTR_1g029540 21.111 450 300 14 13 437 19 438 3.73e-16 80.9
MS.gene69836.t1 MTR_7g011470 27.419 248 154 9 203 435 202 438 3.84e-16 80.9
MS.gene69836.t1 MTR_7g011470 27.419 248 154 9 203 435 206 442 4.04e-16 80.9
MS.gene69836.t1 MTR_4g108250 27.513 189 121 5 258 436 280 462 4.45e-16 80.9
MS.gene69836.t1 MTR_6g013920 28.495 186 117 6 253 435 283 455 5.97e-16 80.5
MS.gene69836.t1 MTR_1g107285 30.159 189 119 5 249 435 263 440 6.27e-16 80.1
MS.gene69836.t1 MTR_3g031400 23.266 447 284 15 8 434 18 425 6.93e-16 80.1
MS.gene69836.t1 MTR_6g013450 22.030 463 316 12 5 429 7 462 7.14e-16 80.1
MS.gene69836.t1 MTR_6g014220 28.962 183 120 5 253 435 282 454 7.62e-16 80.1
MS.gene69836.t1 MTR_5g072860 22.247 454 306 15 8 439 18 446 1.44e-15 79.0
MS.gene69836.t1 MTR_6g014200 27.459 244 152 9 206 435 221 453 1.53e-15 79.0
MS.gene69836.t1 MTR_6g014040 24.569 464 298 17 8 435 10 457 1.77e-15 79.0
MS.gene69836.t1 MTR_0288s0020 24.289 457 288 18 8 435 10 437 2.21e-15 78.6
MS.gene69836.t1 MTR_6g013440 23.747 459 307 16 8 435 11 457 2.27e-15 78.6
MS.gene69836.t1 MTR_5g016480 21.674 466 313 18 1 434 1 446 2.91e-15 78.2
MS.gene69836.t1 MTR_6g014190 27.835 194 130 5 253 446 91 274 3.61e-15 76.3
MS.gene69836.t1 MTR_4g064987 23.830 470 288 20 18 458 18 446 4.89e-15 77.4
MS.gene69836.t1 MTR_5g072810 21.219 443 308 12 8 434 12 429 6.03e-15 77.0
MS.gene69836.t1 MTR_4g118000 29.474 190 113 6 258 432 257 440 6.09e-15 77.0
MS.gene69836.t1 MTR_8g009840 32.500 160 92 3 274 419 333 490 6.84e-15 77.4
MS.gene69836.t1 MTR_8g007585 28.415 183 121 5 253 435 196 368 8.61e-15 76.3
MS.gene69836.t1 MTR_6g014310 26.587 252 149 10 201 435 225 457 1.39e-14 76.3
MS.gene69836.t1 MTR_5g464810 23.542 463 300 20 8 436 12 454 2.03e-14 75.5
MS.gene69836.t1 MTR_5g064240 23.542 463 300 20 8 436 12 454 2.03e-14 75.5
MS.gene69836.t1 MTR_5g072840 21.670 443 303 12 8 434 10 424 2.13e-14 75.5
MS.gene69836.t1 MTR_4g064987 23.830 470 282 21 18 458 18 440 2.16e-14 75.5
MS.gene69836.t1 MTR_3g008010 28.652 178 115 6 259 435 288 454 2.24e-14 75.5
MS.gene69836.t1 MTR_6g014050 26.613 248 154 9 201 435 225 457 3.65e-14 74.7
MS.gene69836.t1 MTR_7g070870 22.829 403 285 11 7 394 18 409 6.08e-14 73.9
MS.gene69836.t1 MTR_6g014250 26.776 183 124 5 253 435 282 454 6.12e-14 73.9
MS.gene69836.t1 MTR_1g040310 21.849 476 292 19 7 433 14 458 7.25e-14 73.9
MS.gene69836.t1 MTR_8g056740 24.215 223 151 5 220 430 121 337 1.29e-13 72.8
MS.gene69836.t1 MTR_5g040030 27.957 186 119 5 259 433 281 462 1.70e-13 72.8
MS.gene69836.t1 MTR_6g014240 26.374 182 124 5 253 434 251 422 1.98e-13 72.4
MS.gene69836.t1 MTR_6g013960 22.175 469 324 15 8 446 10 467 2.08e-13 72.4
MS.gene69836.t1 MTR_6g014187 22.366 465 306 18 8 435 10 456 3.15e-13 72.0
MS.gene69836.t1 MTR_2086s0010 28.662 157 103 4 279 435 1 148 4.71e-13 67.8
MS.gene69836.t1 MTR_1996s0010 28.662 157 103 4 279 435 1 148 4.71e-13 67.8
MS.gene69836.t1 MTR_5g464760 23.110 463 304 17 8 436 12 456 9.76e-13 70.5
MS.gene69836.t1 MTR_4g094220 27.374 179 119 6 258 435 287 455 9.91e-13 70.5
MS.gene69836.t1 MTR_7g039550 25.758 198 129 5 259 447 57 245 1.19e-12 68.6
MS.gene69836.t1 MTR_7g080900 29.379 177 114 6 253 429 261 426 1.25e-12 70.1
MS.gene69836.t1 MTR_6g014150 26.923 182 123 5 253 434 281 452 1.85e-12 69.3
MS.gene69836.t1 MTR_6g014290 24.590 183 128 5 253 435 282 454 1.56e-11 66.6
MS.gene69836.t1 MTR_0536s0030 31.061 132 79 4 312 433 197 326 1.61e-11 65.9
MS.gene69836.t1 MTR_5g031860 28.966 145 97 4 252 395 275 414 2.16e-11 66.2
MS.gene69836.t1 MTR_6g014300 26.115 157 106 5 279 435 296 442 3.14e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69836.t1 AT5G53990 47.046 457 217 9 7 458 5 441 1.39e-145 423
MS.gene69836.t1 AT5G54010 45.671 462 232 7 1 458 1 447 5.67e-145 422
MS.gene69836.t1 AT1G64920 45.098 459 227 9 7 458 5 445 8.78e-141 411
MS.gene69836.t1 AT1G64910 45.374 454 229 7 7 458 5 441 5.88e-140 409
MS.gene69836.t1 AT4G09500 44.371 453 233 9 5 455 3 438 4.44e-138 404
MS.gene69836.t1 AT4G27560 42.857 462 245 7 1 458 1 447 1.02e-137 404
MS.gene69836.t1 AT2G22930 44.469 452 234 7 5 455 3 438 1.50e-137 402
MS.gene69836.t1 AT4G27570 42.641 462 246 7 1 458 1 447 2.43e-137 402
MS.gene69836.t1 AT3G29630 42.457 464 241 7 1 458 1 444 7.62e-136 399
MS.gene69836.t1 AT5G54060 44.444 459 244 8 7 458 12 466 5.05e-135 397
MS.gene69836.t1 AT3G29630 42.950 461 217 9 1 458 1 418 2.09e-131 386
MS.gene69836.t1 AT4G09500 42.572 451 219 9 5 455 3 413 3.19e-128 378
MS.gene69836.t1 AT1G50580 41.921 458 244 7 1 455 1 439 2.43e-126 374
MS.gene69836.t1 AT5G65550 30.444 473 295 17 5 458 6 463 1.27e-64 216
MS.gene69836.t1 AT2G22590 32.120 467 284 15 7 454 14 466 2.84e-63 212
MS.gene69836.t1 AT5G49690 31.707 451 277 15 7 443 9 442 5.03e-63 211
MS.gene69836.t1 AT2G22930 39.908 218 117 4 5 222 3 206 3.44e-51 175
MS.gene69836.t1 AT2G22930 36.842 95 56 2 364 455 193 286 1.30e-12 68.6
MS.gene69836.t1 AT5G03490 27.416 445 285 12 6 435 17 438 7.15e-37 141
MS.gene69836.t1 AT2G15490 26.403 481 316 14 7 456 6 479 3.58e-36 139
MS.gene69836.t1 AT1G51210 28.132 455 267 15 2 433 15 432 9.05e-36 137
MS.gene69836.t1 AT2G15490 26.860 484 313 16 7 456 6 482 2.22e-35 137
MS.gene69836.t1 AT2G15480 26.294 483 314 16 7 456 9 482 2.65e-34 134
MS.gene69836.t1 AT2G15480 26.113 494 311 17 7 456 9 492 1.23e-33 132
MS.gene69836.t1 AT4G34138 28.511 470 267 18 7 433 10 453 7.17e-32 127
MS.gene69836.t1 AT2G16890 26.593 455 289 16 8 436 9 444 8.87e-31 124
MS.gene69836.t1 AT4G34135 26.484 438 282 12 7 413 10 438 9.18e-31 124
MS.gene69836.t1 AT5G12890 26.190 462 298 17 7 437 9 458 2.86e-30 123
MS.gene69836.t1 AT4G34131 26.452 465 293 17 7 435 9 460 3.81e-30 122
MS.gene69836.t1 AT2G36800 26.350 463 296 18 6 433 10 462 1.54e-29 121
MS.gene69836.t1 AT2G36750 26.509 464 294 16 5 433 7 458 1.91e-29 120
MS.gene69836.t1 AT3G50740 26.522 460 289 14 8 435 7 449 2.70e-29 120
MS.gene69836.t1 AT2G36780 26.452 465 294 18 5 433 11 463 5.12e-29 119
MS.gene69836.t1 AT4G36770 36.574 216 116 7 234 435 232 440 4.14e-28 116
MS.gene69836.t1 AT5G14860 26.652 469 280 18 8 436 8 452 7.76e-28 116
MS.gene69836.t1 AT1G01420 25.482 467 278 17 8 435 8 443 5.22e-27 113
MS.gene69836.t1 AT1G01420 25.482 467 278 17 8 435 11 446 5.89e-27 113
MS.gene69836.t1 AT2G16890 26.218 431 275 15 8 412 9 422 8.55e-27 112
MS.gene69836.t1 AT1G73880 25.431 464 282 15 8 438 14 446 9.75e-27 112
MS.gene69836.t1 AT4G01070 26.078 464 280 17 8 435 8 444 9.97e-27 112
MS.gene69836.t1 AT2G18570 34.239 184 112 2 259 434 260 442 1.65e-26 112
MS.gene69836.t1 AT2G36760 25.862 464 300 15 4 433 10 463 2.22e-26 112
MS.gene69836.t1 AT2G31790 26.030 461 271 21 8 434 8 432 4.02e-26 110
MS.gene69836.t1 AT3G53150 25.751 466 296 16 7 428 21 480 5.51e-26 110
MS.gene69836.t1 AT2G31750 25.054 463 289 17 1 436 1 432 1.10e-25 109
MS.gene69836.t1 AT2G30150 24.605 443 295 14 8 436 13 430 1.61e-25 108
MS.gene69836.t1 AT2G31750 25.054 463 289 17 1 436 1 432 1.67e-25 109
MS.gene69836.t1 AT1G05675 25.551 454 280 19 8 434 6 428 1.74e-25 108
MS.gene69836.t1 AT1G10400 25.151 497 287 21 4 451 3 463 7.24e-25 107
MS.gene69836.t1 AT2G30140 24.429 438 295 13 8 433 13 426 1.11e-24 106
MS.gene69836.t1 AT2G30140 25.055 455 270 18 8 433 13 425 1.96e-24 105
MS.gene69836.t1 AT2G18560 29.500 200 127 3 243 434 159 352 3.14e-24 104
MS.gene69836.t1 AT2G36970 23.282 451 314 14 8 437 10 449 3.98e-24 105
MS.gene69836.t1 AT2G30150 24.714 437 290 14 13 435 2 413 4.86e-24 104
MS.gene69836.t1 AT2G43820 24.385 488 284 18 8 456 7 448 1.15e-23 103
MS.gene69836.t1 AT5G59590 26.477 457 282 20 8 445 10 431 5.30e-23 101
MS.gene69836.t1 AT1G01390 25.314 478 288 18 8 444 8 457 9.71e-23 100
MS.gene69836.t1 AT4G15480 22.976 457 295 17 6 429 17 449 1.05e-22 100
MS.gene69836.t1 AT1G01390 25.696 467 278 18 8 435 25 461 1.28e-22 100
MS.gene69836.t1 AT3G21560 24.222 450 311 13 1 429 3 443 1.62e-22 100
MS.gene69836.t1 AT5G59580 26.216 473 291 18 8 455 9 448 1.69e-22 100
MS.gene69836.t1 AT4G15550 25.942 451 283 19 5 424 12 442 1.88e-22 100
MS.gene69836.t1 AT3G53160 25.427 468 303 20 1 433 1 457 2.85e-22 99.8
MS.gene69836.t1 AT1G05680 24.784 464 271 19 8 434 6 428 7.86e-22 98.2
MS.gene69836.t1 AT3G21760 31.658 199 116 6 248 428 258 454 9.82e-22 98.2
MS.gene69836.t1 AT2G29730 26.608 451 277 18 7 425 4 432 1.14e-21 97.8
MS.gene69836.t1 AT5G26310 30.213 235 140 6 216 434 215 441 1.24e-21 97.8
MS.gene69836.t1 AT2G43840 24.167 480 293 16 8 455 7 447 3.25e-21 96.3
MS.gene69836.t1 AT3G21790 30.196 255 153 8 223 454 226 478 4.11e-21 96.3
MS.gene69836.t1 AT1G07250 29.500 200 135 4 259 454 275 472 4.39e-21 95.9
MS.gene69836.t1 AT2G43840 24.167 480 293 16 8 455 7 447 5.36e-21 95.5
MS.gene69836.t1 AT3G21800 32.086 187 108 4 259 428 265 449 5.87e-21 95.5
MS.gene69836.t1 AT4G15260 32.620 187 107 5 259 428 144 328 5.87e-21 94.4
MS.gene69836.t1 AT4G15280 29.348 276 164 8 208 454 232 505 6.33e-21 95.9
MS.gene69836.t1 AT4G15280 29.348 276 164 8 208 454 200 473 7.51e-21 95.5
MS.gene69836.t1 AT5G66690 30.342 234 141 6 216 434 215 441 7.56e-21 95.5
MS.gene69836.t1 AT1G07240 29.433 282 178 8 190 456 202 477 1.67e-20 94.4
MS.gene69836.t1 AT2G36770 36.612 183 102 6 259 428 281 462 3.03e-20 93.6
MS.gene69836.t1 AT1G05530 23.711 485 293 19 5 452 4 448 4.04e-20 92.8
MS.gene69836.t1 AT1G05560 23.285 481 301 17 4 452 1 445 7.10e-20 92.4
MS.gene69836.t1 AT4G15500 24.449 454 304 17 2 435 5 439 1.18e-19 91.7
MS.gene69836.t1 AT1G05560 23.517 489 302 18 4 456 51 503 1.78e-19 91.3
MS.gene69836.t1 AT1G24100 23.188 483 300 16 8 454 11 458 1.80e-19 90.9
MS.gene69836.t1 AT3G22250 33.908 174 97 7 259 428 276 435 6.45e-19 89.4
MS.gene69836.t1 AT2G29710 32.086 187 113 6 245 425 254 432 7.90e-19 89.4
MS.gene69836.t1 AT3G21780 31.606 193 110 6 259 435 259 445 9.05e-19 89.0
MS.gene69836.t1 AT2G29740 31.633 196 124 6 241 428 255 448 1.61e-18 88.2
MS.gene69836.t1 AT3G21750 25.714 245 160 5 230 454 226 468 1.96e-18 87.8
MS.gene69836.t1 AT3G46670 24.609 447 293 17 16 448 17 433 1.97e-18 87.8
MS.gene69836.t1 AT5G05870 26.718 262 176 8 206 458 204 458 2.03e-18 87.8
MS.gene69836.t1 AT4G15490 22.049 449 304 14 8 429 8 437 2.24e-18 87.8
MS.gene69836.t1 AT3G55700 30.846 201 129 6 247 445 248 440 2.71e-18 87.4
MS.gene69836.t1 AT1G07260 27.273 253 163 7 214 456 232 473 3.65e-18 87.0
MS.gene69836.t1 AT2G28080 22.706 436 283 15 12 416 22 434 3.74e-18 87.0
MS.gene69836.t1 AT3G16520 33.125 160 101 3 258 413 262 419 4.23e-18 87.0
MS.gene69836.t1 AT3G16520 33.125 160 101 3 258 413 262 419 5.08e-18 86.7
MS.gene69836.t1 AT3G16520 33.125 160 101 3 258 413 262 419 5.14e-18 86.7
MS.gene69836.t1 AT1G06000 23.245 413 243 12 8 394 10 374 8.15e-18 85.9
MS.gene69836.t1 AT3G11340 32.184 174 104 6 258 428 252 414 1.15e-17 85.5
MS.gene69836.t1 AT5G05860 27.660 235 153 7 207 434 199 423 1.86e-17 84.7
MS.gene69836.t1 AT3G46660 32.701 211 121 9 241 445 242 437 1.87e-17 84.7
MS.gene69836.t1 AT2G29750 32.432 185 115 6 241 417 255 437 2.58e-17 84.7
MS.gene69836.t1 AT4G14090 30.137 219 131 10 241 448 238 445 8.57e-17 82.8
MS.gene69836.t1 AT1G22400 32.143 196 119 7 258 450 290 474 2.03e-16 82.0
MS.gene69836.t1 AT2G36790 34.054 185 110 5 259 433 280 462 3.09e-16 81.3
MS.gene69836.t1 AT2G23250 27.869 183 124 5 252 434 237 411 4.29e-16 80.5
MS.gene69836.t1 AT1G22360 29.609 179 116 5 258 436 286 454 4.93e-16 80.5
MS.gene69836.t1 AT1G22380 22.052 458 315 15 8 436 13 457 8.41e-16 80.1
MS.gene69836.t1 AT1G78270 30.000 180 113 6 259 436 289 457 1.61e-15 79.0
MS.gene69836.t1 AT2G23260 26.776 183 126 5 253 435 256 430 2.75e-15 78.2
MS.gene69836.t1 AT3G55710 29.101 189 125 5 259 445 263 444 5.49e-15 77.4
MS.gene69836.t1 AT3G02100 22.851 477 300 17 8 450 13 455 1.24e-14 76.3
MS.gene69836.t1 AT5G17030 22.907 454 293 21 8 436 12 433 1.66e-14 75.9
MS.gene69836.t1 AT5G05900 22.511 462 298 17 7 436 7 440 2.98e-14 75.1
MS.gene69836.t1 AT5G17050 21.586 454 300 18 8 436 12 434 4.21e-14 74.7
MS.gene69836.t1 AT1G22340 27.374 179 121 4 258 436 289 458 7.11e-14 73.9
MS.gene69836.t1 AT5G38010 25.647 464 281 22 8 445 10 435 1.65e-12 69.7
MS.gene69836.t1 AT1G22360 27.933 179 107 6 258 436 286 442 2.03e-12 69.3
MS.gene69836.t1 AT5G17040 25.641 195 129 7 258 450 252 432 2.28e-12 69.3
MS.gene69836.t1 AT5G17040 25.641 195 129 7 258 450 150 330 3.52e-12 67.8

Find 84 sgRNAs with CRISPR-Local

Find 109 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAAAACCTTATCTACTTTC+AGG 0.218620 2.2:-13926264 MS.gene69836:CDS
AAAGGAAAAGGGATTGTTTA+TGG 0.232535 2.2:-13925994 MS.gene69836:CDS
GAACCATATGCTGAATTTCT+TGG 0.266462 2.2:-13926297 MS.gene69836:CDS
ACCCTTTCATTGAACCCTTC+TGG 0.299693 2.2:+13926018 None:intergenic
AGGTGATGAGGTTTGGGTTA+AGG 0.305801 2.2:+13926805 None:intergenic
GGGACAAAGGTGATGAGGTT+TGG 0.323609 2.2:+13926798 None:intergenic
TTGTTGGAGAGGTGAAGATA+TGG 0.326912 2.2:+13926900 None:intergenic
CATATTGATGGTCTTCCCTT+TGG 0.332617 2.2:-13926762 MS.gene69836:CDS
AAGGGATTGTTTATGGAAGT+TGG 0.335805 2.2:-13925987 MS.gene69836:CDS
TTTCCAAGAAATTCAGCATA+TGG 0.343543 2.2:+13926294 None:intergenic
GGGTTCAATGAAAGGGTTAA+AGG 0.347987 2.2:-13926012 MS.gene69836:CDS
TTACTAGGTCTTGAATTAAC+AGG 0.350238 2.2:-13926102 MS.gene69836:CDS
GGACAAAGGTGATGAGGTTT+GGG 0.351514 2.2:+13926799 None:intergenic
CTCAATGTTCCTCATATTGA+TGG 0.355741 2.2:-13926774 MS.gene69836:CDS
GATCTCAAGAAACCACCTTC+AGG 0.359642 2.2:-13926480 MS.gene69836:CDS
TGTTGGAGAGGTGAAGATAT+GGG 0.366037 2.2:+13926901 None:intergenic
ACAAGTTTAGCTGATGCAAT+TGG 0.371373 2.2:-13926345 MS.gene69836:CDS
ACAAATTGAACTTCTTCTTA+AGG 0.376446 2.2:-13926667 MS.gene69836:CDS
GGCTTAAGTGCTGCAAGAAA+TGG 0.387827 2.2:+13926075 None:intergenic
TCAATTGACTTAAATCCATT+AGG 0.388679 2.2:+13926051 None:intergenic
AATGAAAGGGTTAAAGGAAA+AGG 0.393303 2.2:-13926006 MS.gene69836:CDS
CAGTTTCAAGAGTTGTTACT+AGG 0.414016 2.2:-13926117 MS.gene69836:CDS
TAGAGCTTGATGGATGAATC+AGG 0.414411 2.2:+13926453 None:intergenic
GCAGCACTTAAGCCACCTAA+TGG 0.417726 2.2:-13926066 MS.gene69836:CDS
AAAATGGGAATCATGGCTTA+AGG 0.418141 2.2:-13926202 MS.gene69836:CDS
ATGAAAGGGTTAAAGGAAAA+GGG 0.418857 2.2:-13926005 MS.gene69836:CDS
ATTCTAGAACATCCTTCTGT+TGG 0.422732 2.2:-13925949 MS.gene69836:CDS
AATAAGAGGGACTAAAGAAA+AGG 0.434353 2.2:+13926716 None:intergenic
TCCATTGCTGTAGCAATAAG+AGG 0.436011 2.2:+13926702 None:intergenic
AATCAAAGAAAACTATTTGT+GGG 0.437422 2.2:+13926637 None:intergenic
CAAGTTTAGCTGATGCAATT+GGG 0.440857 2.2:-13926344 MS.gene69836:CDS
AATGTTTCCATGGTTTGCTA+TGG 0.456397 2.2:-13926934 MS.gene69836:CDS
TCAACAAGGAAACTTGTCTT+CGG 0.456884 2.2:-13926405 MS.gene69836:CDS
ACCAGAAGGGTTCAATGAAA+GGG 0.459081 2.2:-13926019 MS.gene69836:CDS
AAATCAAAGAAAACTATTTG+TGG 0.469794 2.2:+13926636 None:intergenic
GTTGAGAAAGGTGATGAAGA+TGG 0.473698 2.2:-13925784 MS.gene69836:CDS
TACCAGAAGGGTTCAATGAA+AGG 0.478236 2.2:-13926020 MS.gene69836:CDS
AAATGGGAATCATGGCTTAA+GGG 0.478566 2.2:-13926201 MS.gene69836:CDS
ATGGATGATGAGAATGAAGT+TGG 0.481015 2.2:-13925718 MS.gene69836:CDS
TTCATGTTGATAGAGCTTGA+TGG 0.481195 2.2:+13926443 None:intergenic
TTGAAGAAGCTTTACCAGAA+GGG 0.482277 2.2:-13926032 MS.gene69836:CDS
AGGAAACTTGTCTTCGGAAG+TGG 0.490313 2.2:-13926399 MS.gene69836:CDS
TTCACATAGCAATGTTTCCA+TGG 0.496374 2.2:-13926944 MS.gene69836:CDS
GTTGGAGAGGTGAAGATATG+GGG 0.500001 2.2:+13926902 None:intergenic
ATGTTTCCATGGTTTGCTAT+GGG 0.504571 2.2:-13926933 MS.gene69836:CDS
ATCTCAAGAAACCACCTTCA+GGG 0.510993 2.2:-13926479 MS.gene69836:CDS
AAGGTTGAGATGTTGTAACT+TGG 0.511625 2.2:+13926824 None:intergenic
CCAAGACATAGCCAAGGAAA+AGG 0.512525 2.2:-13926516 MS.gene69836:CDS
GCTGATGCAATTGGGTTCAA+AGG 0.512832 2.2:-13926336 MS.gene69836:CDS
CCCTCTTATTGCTACAGCAA+TGG 0.516367 2.2:-13926703 MS.gene69836:CDS
AAAGGACCTGAAAGTAGATA+AGG 0.524213 2.2:+13926258 None:intergenic
CAAAGCTGTGAGAATTATGA+TGG 0.527245 2.2:-13925737 MS.gene69836:CDS
AAGGGAAGACCATCAATATG+AGG 0.535527 2.2:+13926765 None:intergenic
ATAAGAGGGACTAAAGAAAA+GGG 0.535599 2.2:+13926717 None:intergenic
TGAAGATGTTTCAGCACCAA+AGG 0.541229 2.2:+13926746 None:intergenic
ATTGAAGAAGCTTTACCAGA+AGG 0.553775 2.2:-13926033 MS.gene69836:CDS
GTTGGTGTAGAAGTTGAGAA+AGG 0.554703 2.2:-13925796 MS.gene69836:CDS
ATTGACTTAAATCCATTAGG+TGG 0.572758 2.2:+13926054 None:intergenic
GAAGATGTTTCAGCACCAAA+GGG 0.579195 2.2:+13926747 None:intergenic
TTATACGATCGTTTGCACAT+AGG 0.579668 2.2:-13926369 MS.gene69836:CDS
AATGATGAGTGAAAAGATGA+AGG 0.586314 2.2:-13925818 MS.gene69836:CDS
TTCAATTTCTATCTTCAACA+AGG 0.588315 2.2:-13926419 MS.gene69836:CDS
TTTGGTGTTTCAGGTAACAA+AGG 0.589154 2.2:+13926240 None:intergenic
ATGAGTGAAAAGATGAAGGT+TGG 0.593081 2.2:-13925814 MS.gene69836:CDS
AACATTGCTATGTGAAGAGG+AGG 0.593159 2.2:+13926951 None:intergenic
GGAAACATTGCTATGTGAAG+AGG 0.596025 2.2:+13926948 None:intergenic
AGGAACATTGAGAGGGACAA+AGG 0.596057 2.2:+13926785 None:intergenic
TGGCTTAAGGGATTCAAACA+TGG 0.597319 2.2:-13926189 MS.gene69836:CDS
TCAATATGAGGAACATTGAG+AGG 0.597639 2.2:+13926777 None:intergenic
ACTCGTTAACACGTGTCAGT+TGG 0.599240 2.2:-13925884 MS.gene69836:CDS
AAGAGGAGGAAGAGATCCCA+TGG 0.613093 2.2:+13926965 None:intergenic
GATGAATCAGGGTACCCTGA+AGG 0.614727 2.2:+13926465 None:intergenic
TGAGAGGGACAAAGGTGATG+AGG 0.616523 2.2:+13926793 None:intergenic
TGGAGCTGCTTCTATAACCG+AGG 0.621385 2.2:-13925908 MS.gene69836:CDS
CCATTGCTGTAGCAATAAGA+GGG 0.627450 2.2:+13926703 None:intergenic
AGAGCTTGATGGATGAATCA+GGG 0.628125 2.2:+13926454 None:intergenic
GTTATGAAACATCCAACAGA+AGG 0.628836 2.2:+13925937 None:intergenic
ACACGTGTTAACGAGTGCCT+CGG 0.644065 2.2:+13925891 None:intergenic
GAATCAGGGTACCCTGAAGG+TGG 0.646439 2.2:+13926468 None:intergenic
CAATATGAGGAACATTGAGA+GGG 0.658346 2.2:+13926778 None:intergenic
AAGTGTCCCATAGCAAACCA+TGG 0.661811 2.2:+13926927 None:intergenic
ATATGATCAACGCCTACACG+TGG 0.668796 2.2:+13925853 None:intergenic
AATGGACCAAGACATAGCCA+AGG 0.696804 2.2:-13926522 MS.gene69836:CDS
GGATGTTTCATAACACACTG+TGG 0.766209 2.2:-13925928 MS.gene69836:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAAAAAATCATAATGAATTA+AGG - chr2.2:13926888-13926907 MS.gene69836:CDS 15.0%
!!! TTTTCTTTGATTTTCAATAT+TGG - chr2.2:13925946-13925965 MS.gene69836:CDS 15.0%
!! AAACAACTTTAGATGAAAAA+TGG - chr2.2:13926354-13926373 MS.gene69836:CDS 20.0%
!! AAATCAAAGAAAACTATTTG+TGG + chr2.2:13925939-13925958 None:intergenic 20.0%
!! AACAACTTTAGATGAAAAAT+GGG - chr2.2:13926355-13926374 MS.gene69836:CDS 20.0%
!! AATCAAAGAAAACTATTTGT+GGG + chr2.2:13925938-13925957 None:intergenic 20.0%
!! CAAAAATAAGATATCGAAAA+TGG + chr2.2:13926029-13926048 None:intergenic 20.0%
!!! CATTTTCGATATCTTATTTT+TGG - chr2.2:13926027-13926046 MS.gene69836:CDS 20.0%
!!! GAATTTCTTGGAAATTTTTA+TGG - chr2.2:13926287-13926306 MS.gene69836:CDS 20.0%
!!! TTTTCATCTAAAGTTGTTTT+TGG + chr2.2:13926353-13926372 None:intergenic 20.0%
! ACAAATTGAACTTCTTCTTA+AGG - chr2.2:13925905-13925924 MS.gene69836:CDS 25.0%
! GCATAAAAAGTCTTCAATAT+TGG - chr2.2:13925994-13926013 MS.gene69836:CDS 25.0%
! TTCAATTTCTATCTTCAACA+AGG - chr2.2:13926153-13926172 MS.gene69836:CDS 25.0%
!! AATTTTTGTGAAAAGCTTCA+AGG - chr2.2:13926953-13926972 MS.gene69836:CDS 25.0%
!! TCAATTGACTTAAATCCATT+AGG + chr2.2:13926524-13926543 None:intergenic 25.0%
!!! AACTTGGTTTGTGTTTTTTT+AGG + chr2.2:13925735-13925754 None:intergenic 25.0%
!!! ACTTGGTTTGTGTTTTTTTA+GGG + chr2.2:13925734-13925753 None:intergenic 25.0%
!!! TCGATATCTTATTTTTGGAA+TGG - chr2.2:13926032-13926051 MS.gene69836:CDS 25.0%
!!! TGAAACTGTTTTTGTTCTAA+TGG + chr2.2:13926443-13926462 None:intergenic 25.0%
AAAGGAAAAGGGATTGTTTA+TGG - chr2.2:13926578-13926597 MS.gene69836:CDS 30.0%
AATAAGAGGGACTAAAGAAA+AGG + chr2.2:13925859-13925878 None:intergenic 30.0%
AATGAAAGGGTTAAAGGAAA+AGG - chr2.2:13926566-13926585 MS.gene69836:CDS 30.0%
AATGATGAGTGAAAAGATGA+AGG - chr2.2:13926754-13926773 MS.gene69836:CDS 30.0%
ATAAGAGGGACTAAAGAAAA+GGG + chr2.2:13925858-13925877 None:intergenic 30.0%
ATGAAAGGGTTAAAGGAAAA+GGG - chr2.2:13926567-13926586 MS.gene69836:CDS 30.0%
TAGATGAAAAATGGGAATCA+TGG - chr2.2:13926363-13926382 MS.gene69836:CDS 30.0%
TCCAACAAATTAGCAAAAAG+AGG - chr2.2:13925687-13925706 MS.gene69836:CDS 30.0%
TTACTAGGTCTTGAATTAAC+AGG - chr2.2:13926470-13926489 MS.gene69836:CDS 30.0%
TTTCCAAGAAATTCAGCATA+TGG + chr2.2:13926281-13926300 None:intergenic 30.0%
! ATTGACTTAAATCCATTAGG+TGG + chr2.2:13926521-13926540 None:intergenic 30.0%
!! ACCTCTTTTTGCTAATTTGT+TGG + chr2.2:13925691-13925710 None:intergenic 30.0%
!!! AAAGTTGTTTTTGGTGTTTC+AGG + chr2.2:13926344-13926363 None:intergenic 30.0%
!!! TCTGTGATTTTTTGTGCATA+TGG - chr2.2:13926407-13926426 MS.gene69836:CDS 30.0%
!!! TTTTTGCTAATTTGTTGGAG+AGG + chr2.2:13925686-13925705 None:intergenic 30.0%
AAAATGGGAATCATGGCTTA+AGG - chr2.2:13926370-13926389 MS.gene69836:CDS 35.0%
AAAGGACCTGAAAGTAGATA+AGG + chr2.2:13926317-13926336 None:intergenic 35.0%
AAATGGGAATCATGGCTTAA+GGG - chr2.2:13926371-13926390 MS.gene69836:CDS 35.0%
AAGGGATTGTTTATGGAAGT+TGG - chr2.2:13926585-13926604 MS.gene69836:CDS 35.0%
AAGGTTGAGATGTTGTAACT+TGG + chr2.2:13925751-13925770 None:intergenic 35.0%
ACAAGTTTAGCTGATGCAAT+TGG - chr2.2:13926227-13926246 MS.gene69836:CDS 35.0%
ATGAGTGAAAAGATGAAGGT+TGG - chr2.2:13926758-13926777 MS.gene69836:CDS 35.0%
ATGGATGATGAGAATGAAGT+TGG - chr2.2:13926854-13926873 MS.gene69836:CDS 35.0%
ATTGAAGAAGCTTTACCAGA+AGG - chr2.2:13926539-13926558 MS.gene69836:CDS 35.0%
CAAAGCTGTGAGAATTATGA+TGG - chr2.2:13926835-13926854 MS.gene69836:CDS 35.0%
CAAGTTTAGCTGATGCAATT+GGG - chr2.2:13926228-13926247 MS.gene69836:CDS 35.0%
CAATATGAGGAACATTGAGA+GGG + chr2.2:13925797-13925816 None:intergenic 35.0%
CAGTTTCAAGAGTTGTTACT+AGG - chr2.2:13926455-13926474 MS.gene69836:CDS 35.0%
CCAAACTTGACACAAAAACT+TGG - chr2.2:13925972-13925991 MS.gene69836:CDS 35.0%
CTCAATGTTCCTCATATTGA+TGG - chr2.2:13925798-13925817 MS.gene69836:CDS 35.0%
GAACCATATGCTGAATTTCT+TGG - chr2.2:13926275-13926294 MS.gene69836:CDS 35.0%
GGAAAACCTTATCTACTTTC+AGG - chr2.2:13926308-13926327 MS.gene69836:CDS 35.0%
GTTATGAAACATCCAACAGA+AGG + chr2.2:13926638-13926657 None:intergenic 35.0%
TCAACAAGGAAACTTGTCTT+CGG - chr2.2:13926167-13926186 MS.gene69836:CDS 35.0%
TCAATATGAGGAACATTGAG+AGG + chr2.2:13925798-13925817 None:intergenic 35.0%
TTATACGATCGTTTGCACAT+AGG - chr2.2:13926203-13926222 MS.gene69836:CDS 35.0%
TTCACATAGCAATGTTTCCA+TGG - chr2.2:13925628-13925647 MS.gene69836:CDS 35.0%
TTGAAGAAGCTTTACCAGAA+GGG - chr2.2:13926540-13926559 MS.gene69836:CDS 35.0%
! CCAAGTTTTTGTGTCAAGTT+TGG + chr2.2:13925975-13925994 None:intergenic 35.0%
! CTACAGTTAATCCTTTTCCT+TGG + chr2.2:13926070-13926089 None:intergenic 35.0%
! TTCATGTTGATAGAGCTTGA+TGG + chr2.2:13926132-13926151 None:intergenic 35.0%
! TTTTGTGCATATGGAAGTGA+AGG - chr2.2:13926416-13926435 MS.gene69836:CDS 35.0%
!! AATGTTTCCATGGTTTGCTA+TGG - chr2.2:13925638-13925657 MS.gene69836:CDS 35.0%
!! ATGTTTCCATGGTTTGCTAT+GGG - chr2.2:13925639-13925658 MS.gene69836:CDS 35.0%
!! ATTCTAGAACATCCTTCTGT+TGG - chr2.2:13926623-13926642 MS.gene69836:CDS 35.0%
!! TTTGGTGTTTCAGGTAACAA+AGG + chr2.2:13926335-13926354 None:intergenic 35.0%
AACATTGCTATGTGAAGAGG+AGG + chr2.2:13925624-13925643 None:intergenic 40.0%
AAGGGAAGACCATCAATATG+AGG + chr2.2:13925810-13925829 None:intergenic 40.0%
ACCAGAAGGGTTCAATGAAA+GGG - chr2.2:13926553-13926572 MS.gene69836:CDS 40.0%
ATCTCAAGAAACCACCTTCA+GGG - chr2.2:13926093-13926112 MS.gene69836:CDS 40.0%
CCATTGCTGTAGCAATAAGA+GGG + chr2.2:13925872-13925891 None:intergenic 40.0%
GAAGATGTTTCAGCACCAAA+GGG + chr2.2:13925828-13925847 None:intergenic 40.0%
GGAAACATTGCTATGTGAAG+AGG + chr2.2:13925627-13925646 None:intergenic 40.0%
GGATGTTTCATAACACACTG+TGG - chr2.2:13926644-13926663 MS.gene69836:CDS 40.0%
GGGTTCAATGAAAGGGTTAA+AGG - chr2.2:13926560-13926579 MS.gene69836:CDS 40.0%
GTTGAGAAAGGTGATGAAGA+TGG - chr2.2:13926788-13926807 MS.gene69836:CDS 40.0%
GTTGGTGTAGAAGTTGAGAA+AGG - chr2.2:13926776-13926795 MS.gene69836:CDS 40.0%
TACCAGAAGGGTTCAATGAA+AGG - chr2.2:13926552-13926571 MS.gene69836:CDS 40.0%
TCCATTGCTGTAGCAATAAG+AGG + chr2.2:13925873-13925892 None:intergenic 40.0%
TGAAGATGTTTCAGCACCAA+AGG + chr2.2:13925829-13925848 None:intergenic 40.0%
TGGCTTAAGGGATTCAAACA+TGG - chr2.2:13926383-13926402 MS.gene69836:CDS 40.0%
TGTTGGAGAGGTGAAGATAT+GGG + chr2.2:13925674-13925693 None:intergenic 40.0%
TTGTTGGAGAGGTGAAGATA+TGG + chr2.2:13925675-13925694 None:intergenic 40.0%
! AGAGCTTGATGGATGAATCA+GGG + chr2.2:13926121-13926140 None:intergenic 40.0%
! CATATTGATGGTCTTCCCTT+TGG - chr2.2:13925810-13925829 MS.gene69836:CDS 40.0%
! TAGAGCTTGATGGATGAATC+AGG + chr2.2:13926122-13926141 None:intergenic 40.0%
AAGTGTCCCATAGCAAACCA+TGG + chr2.2:13925648-13925667 None:intergenic 45.0%
AATGGACCAAGACATAGCCA+AGG - chr2.2:13926050-13926069 MS.gene69836:CDS 45.0%
ACCCTTTCATTGAACCCTTC+TGG + chr2.2:13926557-13926576 None:intergenic 45.0%
ACTCGTTAACACGTGTCAGT+TGG - chr2.2:13926688-13926707 MS.gene69836:CDS 45.0%
AGGAAACTTGTCTTCGGAAG+TGG - chr2.2:13926173-13926192 MS.gene69836:CDS 45.0%
AGGAACATTGAGAGGGACAA+AGG + chr2.2:13925790-13925809 None:intergenic 45.0%
ATATGATCAACGCCTACACG+TGG + chr2.2:13926722-13926741 None:intergenic 45.0%
CCAAGACATAGCCAAGGAAA+AGG - chr2.2:13926056-13926075 MS.gene69836:CDS 45.0%
CCCTCTTATTGCTACAGCAA+TGG - chr2.2:13925869-13925888 MS.gene69836:CDS 45.0%
GATCTCAAGAAACCACCTTC+AGG - chr2.2:13926092-13926111 MS.gene69836:CDS 45.0%
GCTGATGCAATTGGGTTCAA+AGG - chr2.2:13926236-13926255 MS.gene69836:CDS 45.0%
GGACAAAGGTGATGAGGTTT+GGG + chr2.2:13925776-13925795 None:intergenic 45.0%
GTTGGAGAGGTGAAGATATG+GGG + chr2.2:13925673-13925692 None:intergenic 45.0%
! AGGTGATGAGGTTTGGGTTA+AGG + chr2.2:13925770-13925789 None:intergenic 45.0%
! CCTTTTCCTTGGCTATGTCT+TGG + chr2.2:13926059-13926078 None:intergenic 45.0%
! GGCTTAAGTGCTGCAAGAAA+TGG + chr2.2:13926500-13926519 None:intergenic 45.0%
!!! TTGGTTTTGTTGCCACGTGT+AGG - chr2.2:13926707-13926726 MS.gene69836:CDS 45.0%
ACACGTGTTAACGAGTGCCT+CGG + chr2.2:13926684-13926703 None:intergenic 50.0%
GCAGCACTTAAGCCACCTAA+TGG - chr2.2:13926506-13926525 MS.gene69836:CDS 50.0%
GGGACAAAGGTGATGAGGTT+TGG + chr2.2:13925777-13925796 None:intergenic 50.0%
TGAGAGGGACAAAGGTGATG+AGG + chr2.2:13925782-13925801 None:intergenic 50.0%
TGGAGCTGCTTCTATAACCG+AGG - chr2.2:13926664-13926683 MS.gene69836:CDS 50.0%
! GATGAATCAGGGTACCCTGA+AGG + chr2.2:13926110-13926129 None:intergenic 50.0%
! GAATCAGGGTACCCTGAAGG+TGG + chr2.2:13926107-13926126 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 13925609 13926985 13925609 ID=MS.gene69836
chr2.2 mRNA 13925609 13926985 13925609 ID=MS.gene69836.t1;Parent=MS.gene69836
chr2.2 exon 13925609 13926985 13925609 ID=MS.gene69836.t1.exon1;Parent=MS.gene69836.t1
chr2.2 CDS 13925609 13926985 13925609 ID=cds.MS.gene69836.t1;Parent=MS.gene69836.t1
Gene Sequence

>MS.gene69836

ATGGGATCTCTTCCTCCTCTTCACATAGCAATGTTTCCATGGTTTGCTATGGGACACTTAACCCCATATCTTCACCTCTCCAACAAATTAGCAAAAAGAGGTCACAAAATATCATTCTTCATCCCTAAAAAAACACAAACCAAGTTACAACATCTCAACCTTAACCCAAACCTCATCACCTTTGTCCCTCTCAATGTTCCTCATATTGATGGTCTTCCCTTTGGTGCTGAAACATCTTCAGATGTACCCTTTTCTTTAGTCCCTCTTATTGCTACAGCAATGGATCAAACAGAAAAACAAATTGAACTTCTTCTTAAGGAACTAAACCCACAAATAGTTTTCTTTGATTTTCAATATTGGCTACCAAACTTGACACAAAAACTTGGCATAAAAAGTCTTCAATATTGGATAACTAGTCCATTTTCGATATCTTATTTTTGGAATGGACCAAGACATAGCCAAGGAAAAGGATTAACTGTAGATGATCTCAAGAAACCACCTTCAGGGTACCCTGATTCATCCATCAAGCTCTATCAACATGAACTTCAATTTCTATCTTCAACAAGGAAACTTGTCTTCGGAAGTGGTGTATTTTTATACGATCGTTTGCACATAGGTACAAGTTTAGCTGATGCAATTGGGTTCAAAGGTTGCAAAAAACTTGATGAACCATATGCTGAATTTCTTGGAAATTTTTATGGAAAACCTTATCTACTTTCAGGTCCTTTGTTACCTGAAACACCAAAAACAACTTTAGATGAAAAATGGGAATCATGGCTTAAGGGATTCAAACATGGTTCTGTGATTTTTTGTGCATATGGAAGTGAAGGTCCATTAGAACAAAAACAGTTTCAAGAGTTGTTACTAGGTCTTGAATTAACAGGTTTTCCATTTCTTGCAGCACTTAAGCCACCTAATGGATTTAAGTCAATTGAAGAAGCTTTACCAGAAGGGTTCAATGAAAGGGTTAAAGGAAAAGGGATTGTTTATGGAAGTTGGATTCAACAACAGTTGATTCTAGAACATCCTTCTGTTGGATGTTTCATAACACACTGTGGAGCTGCTTCTATAACCGAGGCACTCGTTAACACGTGTCAGTTGGTTTTGTTGCCACGTGTAGGCGTTGATCATATCATGAATGCAAGAATGATGAGTGAAAAGATGAAGGTTGGTGTAGAAGTTGAGAAAGGTGATGAAGATGGATTGTTTACAAAAGAAAGTGTGAGCAAAGCTGTGAGAATTATGATGGATGATGAGAATGAAGTTGGAAGAGAAGTGAGAAAAAATCATAATGAATTAAGGAAGTTTTTATTGAGTGAGAATTTAGAGTCTTCTTGTGTTGATAATTTTTGTGAAAAGCTTCAAGGTTTGATTTAA

Protein sequence

>MS.gene69836.t1

MGSLPPLHIAMFPWFAMGHLTPYLHLSNKLAKRGHKISFFIPKKTQTKLQHLNLNPNLITFVPLNVPHIDGLPFGAETSSDVPFSLVPLIATAMDQTEKQIELLLKELNPQIVFFDFQYWLPNLTQKLGIKSLQYWITSPFSISYFWNGPRHSQGKGLTVDDLKKPPSGYPDSSIKLYQHELQFLSSTRKLVFGSGVFLYDRLHIGTSLADAIGFKGCKKLDEPYAEFLGNFYGKPYLLSGPLLPETPKTTLDEKWESWLKGFKHGSVIFCAYGSEGPLEQKQFQELLLGLELTGFPFLAALKPPNGFKSIEEALPEGFNERVKGKGIVYGSWIQQQLILEHPSVGCFITHCGAASITEALVNTCQLVLLPRVGVDHIMNARMMSEKMKVGVEVEKGDEDGLFTKESVSKAVRIMMDDENEVGREVRKNHNELRKFLLSENLESSCVDNFCEKLQGLI