AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene92080


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene92080.t1 MTR_2g083420 81.004 458 63 1 1 458 1 434 0.0 766
MS.gene92080.t1 MTR_2g083480 80.786 458 88 0 1 458 1 458 0.0 763
MS.gene92080.t1 MTR_2g083390 80.349 458 66 1 1 458 1 434 0.0 756
MS.gene92080.t1 MTR_2g083430 77.948 458 101 0 1 458 1 458 0.0 714
MS.gene92080.t1 MTR_2g083380 65.939 458 156 0 1 458 18 475 0.0 613
MS.gene92080.t1 MTR_2g083490 65.721 458 157 0 1 458 1 458 0.0 612
MS.gene92080.t1 MTR_2g083360 68.433 453 38 4 6 458 27 374 0.0 587
MS.gene92080.t1 MTR_4g079250 61.087 460 175 3 1 458 1 458 0.0 577
MS.gene92080.t1 MTR_4g079270 60.217 460 179 3 1 458 1 458 0.0 574
MS.gene92080.t1 MTR_2g014900 56.195 452 197 1 7 458 6 456 0.0 523
MS.gene92080.t1 MTR_2g086283 47.768 448 120 7 11 457 1 335 1.07e-122 361
MS.gene92080.t1 MTR_1g090270 40.435 460 256 11 7 457 14 464 3.46e-109 331
MS.gene92080.t1 MTR_4g059370 39.815 324 182 6 141 457 74 391 7.49e-77 245
MS.gene92080.t1 MTR_7g067330 32.762 467 256 16 2 454 3 425 1.37e-66 220
MS.gene92080.t1 MTR_8g068330 31.712 473 299 14 1 458 1 464 6.49e-66 219
MS.gene92080.t1 MTR_8g068360 30.983 468 306 11 2 458 6 467 2.94e-63 212
MS.gene92080.t1 MTR_8g068340 31.393 481 280 15 2 454 6 464 3.22e-63 212
MS.gene92080.t1 MTR_7g067120 32.397 463 257 16 2 451 3 422 5.57e-63 210
MS.gene92080.t1 MTR_4g123553 30.886 463 288 15 6 454 13 457 2.13e-61 207
MS.gene92080.t1 MTR_2g008220 31.064 470 293 16 2 455 8 462 4.50e-61 206
MS.gene92080.t1 MTR_2g008225 30.835 467 298 14 2 455 9 463 7.39e-61 206
MS.gene92080.t1 MTR_2g008226 33.263 475 275 20 6 454 8 466 3.91e-60 204
MS.gene92080.t1 MTR_4g079280 43.860 228 83 2 11 238 1 183 2.13e-58 190
MS.gene92080.t1 MTR_2g014930 40.484 289 92 5 17 305 9 217 1.43e-57 190
MS.gene92080.t1 MTR_6g042310 31.102 463 285 16 7 454 17 460 3.71e-57 196
MS.gene92080.t1 MTR_6g036650 30.233 473 295 17 1 454 11 467 1.18e-56 195
MS.gene92080.t1 MTR_2g046620 29.437 462 296 16 6 454 14 458 5.51e-52 182
MS.gene92080.t1 MTR_2g083440 77.451 102 23 0 357 458 11 112 8.07e-51 168
MS.gene92080.t1 MTR_8g007565 30.752 439 278 13 7 428 6 435 6.50e-48 171
MS.gene92080.t1 MTR_8g007650 30.979 439 277 13 7 428 6 435 7.67e-48 171
MS.gene92080.t1 MTR_4g077960 28.194 454 290 17 17 454 1 434 3.74e-45 163
MS.gene92080.t1 MTR_5g066410 29.358 436 263 11 11 427 1 410 1.92e-44 161
MS.gene92080.t1 MTR_1g090280 42.623 183 100 3 279 457 133 314 1.75e-43 155
MS.gene92080.t1 MTR_3g435310 27.912 455 268 14 2 450 12 412 5.23e-43 157
MS.gene92080.t1 MTR_8g071070 26.987 478 308 15 8 457 7 471 4.60e-37 142
MS.gene92080.t1 MTR_5g087620 27.515 487 280 19 8 443 10 474 1.53e-34 135
MS.gene92080.t1 MTR_8g066610 27.044 477 298 18 1 443 1 461 2.23e-34 134
MS.gene92080.t1 MTR_0009s0240 27.407 405 270 12 8 397 7 402 3.95e-33 130
MS.gene92080.t1 MTR_8g009055 28.358 469 264 17 7 434 5 442 4.36e-31 125
MS.gene92080.t1 MTR_6g023665 26.292 445 288 14 9 427 14 444 1.09e-30 124
MS.gene92080.t1 MTR_4g485590 28.883 412 229 15 8 394 9 381 3.64e-30 121
MS.gene92080.t1 MTR_8g027885 27.907 473 295 19 5 452 16 467 7.64e-30 121
MS.gene92080.t1 MTR_2g098430 24.890 454 308 14 9 437 7 452 1.12e-29 121
MS.gene92080.t1 MTR_6g488280 27.840 449 276 18 9 427 7 437 1.56e-29 120
MS.gene92080.t1 MTR_0428s0010 27.840 449 276 18 9 427 7 437 1.56e-29 120
MS.gene92080.t1 MTR_4g031800 25.956 497 293 17 6 458 7 472 1.93e-29 120
MS.gene92080.t1 MTR_8g009050 29.140 477 250 21 7 434 5 442 7.40e-29 118
MS.gene92080.t1 MTR_8g027870 27.234 470 302 17 5 452 16 467 1.07e-28 118
MS.gene92080.t1 MTR_1g062380 25.918 463 290 17 7 428 15 465 8.87e-28 115
MS.gene92080.t1 MTR_6g033625 27.753 454 268 18 9 427 5 433 1.19e-27 115
MS.gene92080.t1 MTR_4g485630 25.255 491 302 21 7 457 8 473 1.27e-27 115
MS.gene92080.t1 MTR_8g465670 26.809 470 269 17 9 434 8 446 1.47e-27 115
MS.gene92080.t1 MTR_8g006730 25.000 448 294 15 8 427 6 439 1.52e-27 115
MS.gene92080.t1 MTR_3g009510 34.101 217 124 4 236 436 241 454 2.02e-27 114
MS.gene92080.t1 MTR_7g013220 25.602 457 286 18 8 437 5 434 3.39e-27 113
MS.gene92080.t1 MTR_7g013180 25.571 438 271 16 8 419 5 413 5.20e-27 113
MS.gene92080.t1 MTR_4g485620 25.495 455 291 15 20 443 1 438 7.51e-27 112
MS.gene92080.t1 MTR_8g012635 34.404 218 122 5 235 435 235 448 8.94e-27 112
MS.gene92080.t1 MTR_7g102460 26.419 458 281 18 5 421 6 448 1.24e-26 112
MS.gene92080.t1 MTR_0184s0030 35.437 206 114 6 237 425 234 437 1.78e-26 112
MS.gene92080.t1 MTR_7g117405 26.226 469 292 18 8 440 12 462 4.57e-26 110
MS.gene92080.t1 MTR_5g045970 27.623 467 281 18 7 432 15 465 5.24e-26 110
MS.gene92080.t1 MTR_0078s0060 25.212 472 285 17 7 440 5 446 8.05e-26 110
MS.gene92080.t1 MTR_7g070740 24.597 496 308 16 7 458 10 483 1.01e-25 110
MS.gene92080.t1 MTR_8g008990 26.709 468 275 18 7 434 5 444 1.34e-25 109
MS.gene92080.t1 MTR_7g070660 23.760 484 322 16 7 457 10 479 2.24e-25 108
MS.gene92080.t1 MTR_8g009073 26.261 476 263 18 7 434 5 440 2.87e-25 108
MS.gene92080.t1 MTR_6g033615 30.435 230 138 6 216 427 194 419 3.09e-25 108
MS.gene92080.t1 MTR_6g038200 25.054 459 277 20 8 436 11 432 3.22e-25 108
MS.gene92080.t1 MTR_7g117170 34.286 210 122 5 257 454 266 471 3.35e-25 108
MS.gene92080.t1 MTR_8g012650 33.028 218 125 5 235 435 235 448 3.36e-25 108
MS.gene92080.t1 MTR_1g019520 35.450 189 107 4 257 434 4 188 3.54e-25 103
MS.gene92080.t1 MTR_7g046490 35.938 192 109 4 253 432 250 439 4.65e-25 107
MS.gene92080.t1 MTR_7g102550 24.742 485 311 18 8 452 9 479 6.24e-25 107
MS.gene92080.t1 MTR_8g006710 33.333 183 109 3 257 427 257 438 6.52e-25 107
MS.gene92080.t1 MTR_8g006270 28.261 276 168 7 167 428 178 437 7.39e-25 107
MS.gene92080.t1 MTR_8g006220 26.458 480 266 17 9 434 7 453 8.11e-25 107
MS.gene92080.t1 MTR_6g038220 24.449 454 285 19 8 436 11 431 1.06e-24 106
MS.gene92080.t1 MTR_6g005600 35.233 193 108 4 255 434 255 443 1.10e-24 106
MS.gene92080.t1 MTR_7g070610 23.780 492 318 14 7 458 12 486 1.42e-24 106
MS.gene92080.t1 MTR_8g009073 33.953 215 124 6 234 434 101 311 1.43e-24 104
MS.gene92080.t1 MTR_0184s0040 32.990 194 116 5 253 436 269 458 1.58e-24 106
MS.gene92080.t1 MTR_0078s0190 32.990 194 116 5 253 436 269 458 1.58e-24 106
MS.gene92080.t1 MTR_8g466240 26.256 438 244 19 1 398 1 399 1.59e-24 105
MS.gene92080.t1 MTR_8g012730 31.349 252 149 6 198 435 44 285 1.86e-24 103
MS.gene92080.t1 MTR_7g055710 23.690 477 300 16 7 440 10 465 3.89e-24 105
MS.gene92080.t1 MTR_8g009067 34.574 188 109 4 257 434 139 322 4.70e-24 103
MS.gene92080.t1 MTR_7g070910 23.014 491 331 14 3 458 6 484 4.81e-24 105
MS.gene92080.t1 MTR_8g012630 34.197 193 109 5 257 435 204 392 7.54e-24 103
MS.gene92080.t1 MTR_8g009067 34.574 188 109 4 257 434 257 440 7.85e-24 103
MS.gene92080.t1 MTR_2g046820 32.759 232 138 7 236 454 236 462 1.06e-23 103
MS.gene92080.t1 MTR_0078s0010 35.417 192 110 5 253 434 254 441 1.35e-23 103
MS.gene92080.t1 MTR_7g013200 34.254 181 112 5 257 437 250 423 1.47e-23 103
MS.gene92080.t1 MTR_7g102450 25.000 460 287 18 8 433 11 446 1.60e-23 103
MS.gene92080.t1 MTR_6g038240 32.308 195 121 6 254 448 261 444 1.64e-23 103
MS.gene92080.t1 MTR_5g045960 25.420 476 296 21 7 440 8 466 2.02e-23 103
MS.gene92080.t1 MTR_8g077590 29.710 276 168 6 166 432 184 442 3.58e-23 102
MS.gene92080.t1 MTR_2g040530 29.851 268 150 9 219 454 203 464 4.06e-23 102
MS.gene92080.t1 MTR_8g012745 30.263 304 167 12 147 435 172 445 4.97e-23 101
MS.gene92080.t1 MTR_7g102560 24.738 477 293 15 5 436 6 461 5.11e-23 102
MS.gene92080.t1 MTR_3g079480 25.000 492 305 18 8 458 21 489 5.56e-23 101
MS.gene92080.t1 MTR_8g009063 26.697 442 278 17 7 419 12 436 5.69e-23 101
MS.gene92080.t1 MTR_4g128720 26.726 449 289 18 7 440 14 437 5.79e-23 101
MS.gene92080.t1 MTR_2g046750 34.052 232 135 8 236 454 239 465 8.77e-23 100
MS.gene92080.t1 MTR_1g019510 34.392 189 109 4 257 434 255 439 1.15e-22 100
MS.gene92080.t1 MTR_5g019580 32.636 239 141 7 236 456 241 477 1.20e-22 100
MS.gene92080.t1 MTR_7g071040 22.403 491 334 12 3 458 12 490 1.24e-22 100
MS.gene92080.t1 MTR_5g035560 24.583 480 296 19 7 456 10 453 1.30e-22 100
MS.gene92080.t1 MTR_5g019580 33.796 216 124 6 236 433 265 479 1.33e-22 100
MS.gene92080.t1 MTR_6g033725 30.802 237 142 7 216 434 205 437 1.34e-22 100
MS.gene92080.t1 MTR_4g117980 25.161 465 277 18 6 424 9 448 1.65e-22 100
MS.gene92080.t1 MTR_3g479520 24.897 486 304 18 8 454 15 478 1.65e-22 100
MS.gene92080.t1 MTR_7g013240 26.304 441 257 22 8 420 6 406 1.73e-22 99.8
MS.gene92080.t1 MTR_4g024020 24.838 463 285 18 5 421 6 451 2.28e-22 100
MS.gene92080.t1 MTR_7g102520 25.996 477 293 18 1 432 1 462 2.84e-22 99.8
MS.gene92080.t1 MTR_6g038230 25.265 471 274 19 8 443 11 438 2.96e-22 99.4
MS.gene92080.t1 MTR_7g070810 25.850 441 292 13 7 421 8 439 3.25e-22 99.4
MS.gene92080.t1 MTR_1g107350 24.138 464 302 18 1 434 1 444 3.31e-22 99.4
MS.gene92080.t1 MTR_5g035580 27.612 268 160 7 215 458 196 453 5.19e-22 98.6
MS.gene92080.t1 MTR_4g117950 24.675 462 265 18 6 422 4 427 5.20e-22 98.6
MS.gene92080.t1 MTR_7g102490 24.009 454 299 17 5 421 6 450 5.40e-22 99.0
MS.gene92080.t1 MTR_3g069690 32.787 183 114 5 253 434 251 425 5.53e-22 98.6
MS.gene92080.t1 MTR_7g047030 34.375 192 112 5 253 434 254 441 6.19e-22 98.6
MS.gene92080.t1 MTR_7g047270 34.375 192 112 5 253 434 254 441 6.19e-22 98.6
MS.gene92080.t1 MTR_8g006260 31.795 195 113 7 259 435 263 455 1.67e-21 97.4
MS.gene92080.t1 MTR_8g074550 23.750 480 304 19 1 434 1 464 1.86e-21 97.4
MS.gene92080.t1 MTR_7g070930 22.614 482 318 14 1 440 1 469 1.90e-21 97.4
MS.gene92080.t1 MTR_5g090610 27.237 257 161 6 206 438 190 444 2.24e-21 96.7
MS.gene92080.t1 MTR_5g098960 25.205 488 288 21 1 449 1 450 2.37e-21 96.7
MS.gene92080.t1 MTR_4g082820 27.696 408 245 13 7 384 6 393 2.52e-21 96.7
MS.gene92080.t1 MTR_8g044140 25.840 387 237 14 64 416 37 407 3.11e-21 96.3
MS.gene92080.t1 MTR_3g009490 35.329 167 92 4 283 436 3 166 3.33e-21 91.3
MS.gene92080.t1 MTR_7g070940 23.984 492 307 17 7 458 8 472 3.91e-21 96.3
MS.gene92080.t1 MTR_5g098930 23.651 482 302 17 7 447 4 460 4.60e-21 95.9
MS.gene92080.t1 MTR_4g128690 25.055 455 286 16 7 440 14 434 5.14e-21 95.5
MS.gene92080.t1 MTR_4g082810 27.685 419 259 14 7 397 6 408 5.47e-21 95.1
MS.gene92080.t1 MTR_0536s0010 25.380 461 262 21 6 422 19 441 6.69e-21 95.5
MS.gene92080.t1 MTR_5g090700 29.119 261 153 10 206 439 206 461 7.39e-21 95.5
MS.gene92080.t1 MTR_7g013260 32.086 187 114 7 257 443 251 424 9.59e-21 94.7
MS.gene92080.t1 MTR_1g107315 25.170 441 284 16 1 412 1 424 9.69e-21 95.1
MS.gene92080.t1 MTR_8g088560 32.642 193 122 6 257 449 264 448 1.29e-20 94.4
MS.gene92080.t1 MTR_2g034990 23.144 458 291 13 6 422 9 446 1.39e-20 94.7
MS.gene92080.t1 MTR_8g008970 32.447 188 113 4 257 434 257 440 1.47e-20 95.1
MS.gene92080.t1 MTR_8g008970 34.146 164 99 4 257 419 596 751 3.40e-16 81.6
MS.gene92080.t1 MTR_3g049970 24.681 470 288 20 3 434 4 445 1.48e-20 94.4
MS.gene92080.t1 MTR_6g033675 27.848 237 146 6 219 434 208 440 1.55e-20 94.4
MS.gene92080.t1 MTR_7g070800 22.727 462 306 14 7 433 5 450 2.23e-20 94.0
MS.gene92080.t1 MTR_8g064880 25.275 455 276 17 3 416 4 435 2.84e-20 93.6
MS.gene92080.t1 MTR_8g083280 30.180 222 138 7 241 456 249 459 2.88e-20 93.6
MS.gene92080.t1 MTR_4g485640 24.256 437 290 16 18 428 219 640 3.79e-20 94.0
MS.gene92080.t1 MTR_7g070780 23.158 475 313 16 3 440 6 465 4.93e-20 92.8
MS.gene92080.t1 MTR_5g090620 27.376 263 157 9 206 439 203 460 5.12e-20 92.8
MS.gene92080.t1 MTR_3g084540 28.910 211 138 4 253 456 266 471 7.52e-20 92.4
MS.gene92080.t1 MTR_5g058320 25.333 450 274 17 5 420 7 428 8.36e-20 92.0
MS.gene92080.t1 MTR_5g067170 32.804 189 110 5 253 425 262 449 8.70e-20 92.0
MS.gene92080.t1 MTR_6g033660 32.065 184 119 4 253 434 260 439 1.08e-19 91.7
MS.gene92080.t1 MTR_5g090630 28.958 259 147 10 216 439 194 450 1.14e-19 91.7
MS.gene92080.t1 MTR_8g083290 33.520 179 112 5 257 434 267 439 1.21e-19 91.7
MS.gene92080.t1 MTR_4g008630 27.273 242 161 6 208 437 203 441 1.41e-19 91.3
MS.gene92080.t1 MTR_5g090660 28.077 260 150 9 215 439 200 457 1.58e-19 91.7
MS.gene92080.t1 MTR_5g027210 25.660 265 162 4 212 444 212 473 1.70e-19 91.3
MS.gene92080.t1 MTR_0891s0010 28.704 216 136 6 221 427 52 258 1.95e-19 89.0
MS.gene92080.t1 MTR_6g013900 25.490 459 282 17 8 427 10 447 2.55e-19 90.5
MS.gene92080.t1 MTR_0536s0020 24.848 495 289 21 7 450 17 479 2.89e-19 90.5
MS.gene92080.t1 MTR_3g084530 30.890 191 119 5 253 436 266 450 3.37e-19 90.1
MS.gene92080.t1 MTR_5g090670 26.071 280 164 10 216 458 203 476 3.53e-19 90.1
MS.gene92080.t1 MTR_2g059240 23.230 452 307 11 5 431 10 446 3.59e-19 90.1
MS.gene92080.t1 MTR_3g084520 29.082 196 126 5 248 436 261 450 3.63e-19 90.1
MS.gene92080.t1 MTR_0288s0020 24.401 459 283 16 8 434 10 436 4.91e-19 89.7
MS.gene92080.t1 MTR_6g014270 23.567 471 303 17 2 434 3 454 5.09e-19 89.7
MS.gene92080.t1 MTR_6g014170 25.054 459 305 15 8 446 10 449 5.15e-19 89.7
MS.gene92080.t1 MTR_7g080950 30.978 184 116 6 253 436 253 425 5.72e-19 89.4
MS.gene92080.t1 MTR_3g479490 23.246 499 307 22 7 458 5 474 6.06e-19 89.4
MS.gene92080.t1 MTR_3g479610 28.986 207 129 6 257 458 120 313 8.56e-19 87.4
MS.gene92080.t1 MTR_2g035020 23.632 457 290 18 6 422 9 446 9.98e-19 89.0
MS.gene92080.t1 MTR_8g064870 24.190 463 295 18 6 434 9 449 1.03e-18 89.0
MS.gene92080.t1 MTR_5g016660 21.739 483 287 16 3 427 5 454 1.61e-18 88.2
MS.gene92080.t1 MTR_6g014220 24.353 464 294 15 8 434 10 453 1.79e-18 88.2
MS.gene92080.t1 MTR_8g090095 28.226 248 160 7 208 440 217 461 1.90e-18 88.2
MS.gene92080.t1 MTR_3g008010 24.945 457 285 17 8 425 10 447 2.05e-18 87.8
MS.gene92080.t1 MTR_7g012120 30.412 194 119 5 250 428 263 455 2.86e-18 87.4
MS.gene92080.t1 MTR_4g117890 24.000 500 298 21 7 456 12 479 2.89e-18 87.4
MS.gene92080.t1 MTR_4g094920 29.245 212 138 8 253 458 275 480 2.93e-18 87.4
MS.gene92080.t1 MTR_8g032950 24.406 463 286 18 6 427 10 449 3.42e-18 87.4
MS.gene92080.t1 MTR_2g035040 29.897 194 117 5 257 436 173 361 3.75e-18 86.7
MS.gene92080.t1 MTR_6g038300 30.055 183 118 5 254 436 261 433 4.93e-18 86.7
MS.gene92080.t1 MTR_5g029800 31.319 182 110 4 250 417 257 437 4.99e-18 86.7
MS.gene92080.t1 MTR_6g013990 23.913 460 301 15 8 434 10 453 7.36e-18 86.3
MS.gene92080.t1 MTR_1g107380 27.660 235 148 8 236 456 244 470 8.10e-18 86.3
MS.gene92080.t1 MTR_6g035265 23.226 465 295 18 6 433 9 448 9.30e-18 85.9
MS.gene92080.t1 MTR_7g080940 29.508 183 118 5 254 436 259 430 9.70e-18 85.9
MS.gene92080.t1 MTR_1g107360 30.392 204 130 5 232 434 245 437 1.01e-17 85.9
MS.gene92080.t1 MTR_4g095008 30.769 169 110 5 253 417 260 425 1.14e-17 85.9
MS.gene92080.t1 MTR_7g011470 25.602 457 281 15 8 434 10 437 1.37e-17 85.5
MS.gene92080.t1 MTR_6g035185 22.340 470 302 16 6 433 9 457 1.79e-17 85.1
MS.gene92080.t1 MTR_6g013920 25.000 460 283 17 8 427 10 447 2.10e-17 84.7
MS.gene92080.t1 MTR_1g029540 25.926 243 164 6 208 437 199 438 2.51e-17 84.3
MS.gene92080.t1 MTR_5g040030 25.954 262 165 8 196 433 206 462 2.76e-17 84.7
MS.gene92080.t1 MTR_6g013960 22.894 463 304 17 8 434 10 455 2.90e-17 84.3
MS.gene92080.t1 MTR_7g080935 28.962 183 119 5 254 436 259 430 3.03e-17 84.3
MS.gene92080.t1 MTR_5g090580 25.940 266 165 8 206 444 204 464 3.05e-17 84.3
MS.gene92080.t1 MTR_5g072860 22.687 454 294 15 8 434 18 441 4.71e-17 83.6
MS.gene92080.t1 MTR_7g011470 23.861 461 288 12 8 434 10 441 5.87e-17 83.6
MS.gene92080.t1 MTR_6g013450 23.504 468 303 15 5 429 7 462 7.23e-17 83.2
MS.gene92080.t1 MTR_5g090600 26.562 256 152 9 216 445 199 444 7.64e-17 82.8
MS.gene92080.t1 MTR_7g071050 23.241 469 290 18 7 455 12 430 8.27e-17 82.8
MS.gene92080.t1 MTR_4g117960 23.320 506 309 19 1 458 6 480 1.13e-16 82.8
MS.gene92080.t1 MTR_6g011340 23.983 467 294 17 8 434 10 455 1.48e-16 82.4
MS.gene92080.t1 MTR_6g014020 23.617 470 292 16 8 434 10 455 1.60e-16 82.0
MS.gene92080.t1 MTR_3g069710 27.586 261 170 8 208 457 202 454 1.91e-16 81.6
MS.gene92080.t1 MTR_8g059425 24.086 465 294 19 8 434 10 453 2.56e-16 81.6
MS.gene92080.t1 MTR_5g072810 21.124 445 306 15 8 434 12 429 2.57e-16 81.3
MS.gene92080.t1 MTR_6g014250 28.646 192 123 6 257 446 286 465 3.10e-16 81.3
MS.gene92080.t1 MTR_8g056740 25.431 232 159 5 210 431 111 338 3.87e-16 80.5
MS.gene92080.t1 MTR_6g014200 29.891 184 115 6 253 434 281 452 3.98e-16 80.9
MS.gene92080.t1 MTR_5g072820 23.543 446 291 16 8 434 10 424 4.40e-16 80.5
MS.gene92080.t1 MTR_7g470610 25.243 309 184 10 120 409 5 285 4.96e-16 79.0
MS.gene92080.t1 MTR_7g070583 25.243 309 184 10 120 409 5 285 4.96e-16 79.0
MS.gene92080.t1 MTR_4g108250 21.627 504 325 14 3 458 6 487 5.57e-16 80.5
MS.gene92080.t1 MTR_8g007585 30.000 180 112 6 257 434 200 367 6.01e-16 79.7
MS.gene92080.t1 MTR_2g008210 31.818 176 111 6 253 427 278 445 6.81e-16 80.1
MS.gene92080.t1 MTR_7g070860 21.475 461 299 14 7 433 6 437 7.18e-16 80.1
MS.gene92080.t1 MTR_5g070040 30.085 236 143 10 205 427 216 442 8.36e-16 79.7
MS.gene92080.t1 MTR_6g014190 29.891 184 115 6 253 434 91 262 1.16e-15 77.8
MS.gene92080.t1 MTR_1g107375 30.256 195 124 5 240 434 247 429 2.70e-15 78.2
MS.gene92080.t1 MTR_3g031450 27.803 223 131 7 220 427 213 420 3.12e-15 78.2
MS.gene92080.t1 MTR_1g040310 23.919 393 234 16 64 416 75 442 3.29e-15 78.2
MS.gene92080.t1 MTR_6g014240 28.804 184 117 6 253 434 251 422 4.18e-15 77.8
MS.gene92080.t1 MTR_7g070870 22.738 409 284 14 4 394 15 409 1.14e-14 76.3
MS.gene92080.t1 MTR_6g014310 28.333 180 115 6 257 434 289 456 1.34e-14 76.3
MS.gene92080.t1 MTR_4g118000 23.644 461 259 19 6 417 10 426 1.66e-14 75.9
MS.gene92080.t1 MTR_5g016480 33.036 112 73 2 251 361 267 377 1.85e-14 75.9
MS.gene92080.t1 MTR_6g014050 29.121 182 115 6 255 434 287 456 5.80e-14 74.3
MS.gene92080.t1 MTR_0036s0220 28.409 176 115 5 253 428 282 446 6.18e-14 73.9
MS.gene92080.t1 MTR_6g014150 28.994 169 108 5 253 419 281 439 1.43e-13 72.8
MS.gene92080.t1 MTR_5g004940 26.667 195 130 5 257 439 197 390 2.06e-13 72.0
MS.gene92080.t1 MTR_3g479470 23.256 430 269 18 8 395 13 423 2.15e-13 72.4
MS.gene92080.t1 MTR_6g014040 24.416 471 288 19 8 434 10 456 2.24e-13 72.4
MS.gene92080.t1 MTR_5g072840 21.445 443 304 12 8 434 10 424 2.98e-13 72.0
MS.gene92080.t1 MTR_6g014290 27.222 180 117 6 257 434 286 453 5.05e-13 71.2
MS.gene92080.t1 MTR_1g107285 30.120 166 105 4 249 412 263 419 5.87e-13 70.9
MS.gene92080.t1 MTR_5g072830 22.197 446 297 16 8 434 10 424 8.17e-13 70.5
MS.gene92080.t1 MTR_5g464810 28.571 175 114 5 253 427 282 445 8.63e-13 70.5
MS.gene92080.t1 MTR_5g064240 28.571 175 114 5 253 427 282 445 8.63e-13 70.5
MS.gene92080.t1 MTR_7g080900 26.630 184 125 5 257 440 264 437 3.23e-12 68.6
MS.gene92080.t1 MTR_8g009840 37.143 105 64 2 315 419 388 490 6.45e-12 67.8
MS.gene92080.t1 MTR_7g039550 24.107 224 145 5 220 421 5 225 7.05e-12 66.2
MS.gene92080.t1 MTR_4g094220 26.404 178 122 4 257 434 286 454 9.93e-12 67.4
MS.gene92080.t1 MTR_2086s0010 26.846 149 100 4 279 427 1 140 1.00e-11 63.9
MS.gene92080.t1 MTR_1996s0010 26.846 149 100 4 279 427 1 140 1.00e-11 63.9
MS.gene92080.t1 MTR_6g078320 28.000 200 124 6 236 420 252 446 1.59e-11 66.6
MS.gene92080.t1 MTR_0477s0010 27.717 184 119 6 253 434 121 292 2.91e-11 64.7
MS.gene92080.t1 MTR_5g031860 26.842 190 122 6 257 436 280 462 3.34e-11 65.5
MS.gene92080.t1 MTR_0536s0030 30.534 131 78 4 312 432 197 324 9.14e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene92080.t1 AT5G54010 45.916 453 234 6 7 458 5 447 2.18e-145 423
MS.gene92080.t1 AT5G53990 45.254 453 231 5 7 458 5 441 8.70e-143 416
MS.gene92080.t1 AT4G27560 43.860 456 238 6 7 458 6 447 2.53e-139 407
MS.gene92080.t1 AT4G27570 43.421 456 240 7 7 458 6 447 1.12e-138 406
MS.gene92080.t1 AT4G09500 43.736 455 239 8 5 458 3 441 1.20e-136 400
MS.gene92080.t1 AT1G64920 43.326 457 238 6 7 458 5 445 8.05e-136 399
MS.gene92080.t1 AT2G22930 44.615 455 235 6 5 458 3 441 1.59e-135 397
MS.gene92080.t1 AT5G54060 44.469 461 241 8 7 458 12 466 1.22e-134 396
MS.gene92080.t1 AT1G64910 43.107 457 235 6 7 458 5 441 1.02e-133 393
MS.gene92080.t1 AT3G29630 43.267 453 235 6 7 454 5 440 1.90e-133 392
MS.gene92080.t1 AT3G29630 42.889 450 215 7 7 454 5 414 5.94e-127 375
MS.gene92080.t1 AT4G09500 42.070 454 223 9 5 458 3 416 3.02e-124 368
MS.gene92080.t1 AT1G50580 41.943 453 239 7 7 454 5 438 8.58e-123 365
MS.gene92080.t1 AT5G49690 32.527 455 284 11 7 452 9 449 1.46e-66 221
MS.gene92080.t1 AT2G22590 33.550 462 284 15 7 454 14 466 3.62e-66 220
MS.gene92080.t1 AT5G65550 31.290 473 283 16 5 454 6 459 5.34e-66 219
MS.gene92080.t1 AT2G22930 39.269 219 119 3 5 223 3 207 6.40e-48 166
MS.gene92080.t1 AT2G22930 37.143 105 61 3 357 458 187 289 5.59e-14 72.8
MS.gene92080.t1 AT5G03490 27.902 448 284 13 2 434 14 437 3.92e-38 144
MS.gene92080.t1 AT1G51210 28.636 440 273 15 8 433 20 432 1.88e-36 139
MS.gene92080.t1 AT2G15480 27.983 461 291 15 7 434 9 461 3.79e-33 131
MS.gene92080.t1 AT5G12890 27.686 484 281 21 4 443 6 464 9.89e-33 130
MS.gene92080.t1 AT4G34131 27.778 468 282 17 1 428 1 452 1.10e-32 129
MS.gene92080.t1 AT4G34135 28.009 457 257 19 7 416 10 441 1.23e-32 129
MS.gene92080.t1 AT2G15490 27.511 458 289 15 7 430 6 454 1.41e-32 129
MS.gene92080.t1 AT2G15490 27.594 453 288 14 7 428 6 449 1.64e-32 129
MS.gene92080.t1 AT2G15480 27.494 451 291 13 7 428 9 452 1.77e-32 129
MS.gene92080.t1 AT1G73880 25.934 482 311 17 2 457 8 469 3.78e-31 125
MS.gene92080.t1 AT4G36770 27.312 465 275 18 7 435 3 440 2.98e-30 122
MS.gene92080.t1 AT1G05675 27.865 445 281 15 8 434 6 428 2.04e-29 120
MS.gene92080.t1 AT2G36750 27.571 457 277 19 5 422 7 448 2.18e-29 120
MS.gene92080.t1 AT4G34138 25.101 494 303 14 7 458 10 478 9.68e-29 118
MS.gene92080.t1 AT2G16890 26.577 444 289 19 8 429 9 437 1.34e-28 118
MS.gene92080.t1 AT1G10400 25.000 488 295 21 7 452 6 464 1.82e-28 117
MS.gene92080.t1 AT3G53150 27.061 473 279 20 7 427 21 479 2.46e-28 117
MS.gene92080.t1 AT2G31750 25.607 453 285 15 8 436 8 432 2.90e-28 117
MS.gene92080.t1 AT2G31750 25.607 453 285 15 8 436 8 432 5.62e-28 116
MS.gene92080.t1 AT2G36770 27.015 459 291 17 5 427 11 461 2.10e-27 114
MS.gene92080.t1 AT2G18570 24.411 467 295 14 1 434 1 442 6.30e-27 113
MS.gene92080.t1 AT2G36800 26.350 463 288 17 6 427 10 460 1.98e-26 112
MS.gene92080.t1 AT2G31790 25.205 488 289 18 8 458 8 456 2.45e-26 111
MS.gene92080.t1 AT2G16890 25.995 427 281 17 8 412 9 422 3.62e-26 110
MS.gene92080.t1 AT2G36760 25.942 451 291 16 5 421 11 452 6.32e-26 110
MS.gene92080.t1 AT1G05680 27.039 466 258 22 8 434 6 428 9.48e-26 109
MS.gene92080.t1 AT1G01420 26.681 476 269 17 8 439 8 447 1.09e-25 109
MS.gene92080.t1 AT1G01420 26.681 476 269 17 8 439 11 450 1.30e-25 109
MS.gene92080.t1 AT2G36780 27.021 470 277 22 5 427 11 461 4.34e-25 108
MS.gene92080.t1 AT4G01070 34.862 218 124 6 236 439 235 448 8.22e-25 107
MS.gene92080.t1 AT2G43820 24.101 473 286 18 8 449 7 437 1.30e-24 106
MS.gene92080.t1 AT5G14860 25.000 464 280 17 8 429 8 445 1.94e-24 106
MS.gene92080.t1 AT3G53160 25.108 462 301 18 1 427 1 452 1.03e-23 103
MS.gene92080.t1 AT2G18560 28.972 214 143 2 229 434 140 352 1.86e-23 102
MS.gene92080.t1 AT5G66690 25.214 468 278 15 8 435 7 442 6.38e-23 101
MS.gene92080.t1 AT2G30150 24.536 485 302 21 4 458 6 456 1.84e-22 100
MS.gene92080.t1 AT3G50740 30.180 222 137 3 229 435 231 449 2.46e-22 99.8
MS.gene92080.t1 AT5G26310 24.236 458 295 15 8 435 7 442 8.07e-22 98.2
MS.gene92080.t1 AT4G15260 29.954 217 133 5 257 456 142 356 9.49e-22 96.7
MS.gene92080.t1 AT2G29730 26.233 446 285 15 7 425 4 432 1.56e-21 97.4
MS.gene92080.t1 AT2G43840 23.629 474 285 18 8 448 7 436 1.88e-21 97.1
MS.gene92080.t1 AT2G30140 24.738 477 308 19 2 456 5 452 3.01e-21 96.3
MS.gene92080.t1 AT2G43840 23.629 474 285 18 8 448 7 436 3.40e-21 96.3
MS.gene92080.t1 AT2G36970 28.270 237 150 6 214 437 220 449 3.52e-21 96.3
MS.gene92080.t1 AT2G30140 24.324 481 306 20 2 456 5 453 5.47e-21 95.5
MS.gene92080.t1 AT2G30150 24.313 473 297 20 13 458 2 440 5.96e-21 95.5
MS.gene92080.t1 AT3G21800 30.233 215 131 4 257 454 263 475 6.20e-21 95.5
MS.gene92080.t1 AT4G15280 30.556 216 132 4 257 456 294 507 6.62e-21 95.9
MS.gene92080.t1 AT4G15280 30.556 216 132 4 257 456 262 475 7.72e-21 95.5
MS.gene92080.t1 AT3G21560 24.330 485 321 18 1 454 3 472 1.04e-20 95.1
MS.gene92080.t1 AT2G36790 24.520 469 296 20 2 427 7 460 1.61e-20 94.4
MS.gene92080.t1 AT3G22250 33.333 198 110 8 257 450 274 453 2.67e-20 93.6
MS.gene92080.t1 AT3G21790 27.881 269 159 7 219 454 212 478 3.83e-20 93.2
MS.gene92080.t1 AT3G21760 29.907 214 132 5 257 454 269 480 4.90e-20 92.8
MS.gene92080.t1 AT4G15550 22.756 479 332 14 2 456 7 471 5.33e-20 92.8
MS.gene92080.t1 AT3G46670 25.740 439 265 20 16 428 17 420 6.85e-20 92.4
MS.gene92080.t1 AT5G59580 25.773 485 276 21 8 454 9 447 7.26e-20 92.0
MS.gene92080.t1 AT1G07250 28.571 231 153 5 236 456 246 474 7.66e-20 92.4
MS.gene92080.t1 AT4G15500 23.210 461 302 18 1 434 3 438 1.09e-19 91.7
MS.gene92080.t1 AT5G05870 29.339 242 155 7 206 440 204 436 1.70e-19 91.3
MS.gene92080.t1 AT3G21780 29.167 216 135 5 257 456 257 470 2.00e-19 90.9
MS.gene92080.t1 AT1G01390 26.964 471 275 22 8 439 8 448 2.10e-19 90.9
MS.gene92080.t1 AT1G01390 26.964 471 275 22 8 439 25 465 2.36e-19 90.9
MS.gene92080.t1 AT1G07260 29.258 229 150 6 236 454 245 471 4.31e-19 90.1
MS.gene92080.t1 AT1G24100 21.757 478 317 14 8 458 11 458 4.42e-19 89.7
MS.gene92080.t1 AT5G59590 29.730 259 164 10 205 454 200 449 5.53e-19 89.4
MS.gene92080.t1 AT3G21750 27.386 241 153 5 236 456 232 470 8.12e-19 89.4
MS.gene92080.t1 AT4G15490 22.698 467 303 18 1 434 1 442 8.49e-19 89.0
MS.gene92080.t1 AT2G29710 33.714 175 103 5 257 425 265 432 1.79e-18 88.2
MS.gene92080.t1 AT5G05860 24.667 450 295 16 7 440 8 429 2.05e-18 87.8
MS.gene92080.t1 AT3G55700 28.226 248 160 6 206 445 203 440 3.10e-18 87.4
MS.gene92080.t1 AT4G15480 30.978 184 120 6 254 434 275 454 3.37e-18 87.4
MS.gene92080.t1 AT5G05880 25.393 445 285 18 1 425 1 418 1.02e-17 85.5
MS.gene92080.t1 AT1G07240 30.702 228 146 7 236 454 251 475 1.39e-17 85.5
MS.gene92080.t1 AT3G11340 24.828 435 280 16 9 427 10 413 1.57e-17 85.1
MS.gene92080.t1 AT2G29740 32.000 200 126 6 236 427 250 447 2.04e-17 84.7
MS.gene92080.t1 AT3G16520 29.897 194 125 4 257 446 261 447 2.45e-17 84.3
MS.gene92080.t1 AT3G16520 31.928 166 107 3 257 418 261 424 2.59e-17 84.3
MS.gene92080.t1 AT3G16520 31.928 166 107 3 257 418 261 424 2.89e-17 84.3
MS.gene92080.t1 AT3G55710 32.500 160 99 5 259 416 263 415 5.74e-17 83.6
MS.gene92080.t1 AT2G23250 29.808 208 130 6 235 432 210 411 1.06e-16 82.4
MS.gene92080.t1 AT4G14090 29.648 199 129 7 253 448 255 445 1.32e-16 82.4
MS.gene92080.t1 AT3G46690 23.608 449 304 15 8 440 9 434 1.49e-16 82.0
MS.gene92080.t1 AT1G05560 28.251 223 139 6 241 448 275 491 2.04e-16 82.0
MS.gene92080.t1 AT5G05890 28.017 232 154 7 207 432 204 428 2.22e-16 81.6
MS.gene92080.t1 AT1G05560 27.803 223 140 6 241 448 225 441 2.86e-16 81.3
MS.gene92080.t1 AT1G06000 23.844 411 243 15 8 394 10 374 3.63e-16 80.9
MS.gene92080.t1 AT2G23260 29.775 178 117 5 257 434 260 429 5.35e-16 80.5
MS.gene92080.t1 AT1G05530 26.122 245 157 6 222 448 206 444 1.17e-15 79.3
MS.gene92080.t1 AT2G28080 25.417 240 157 7 214 435 220 455 1.53e-15 79.3
MS.gene92080.t1 AT1G22400 31.429 175 110 5 253 427 285 449 5.47e-15 77.4
MS.gene92080.t1 AT3G02100 29.348 184 111 5 257 440 277 441 1.23e-14 76.3
MS.gene92080.t1 AT1G30530 28.899 218 130 8 243 450 241 443 1.24e-14 76.3
MS.gene92080.t1 AT1G22360 29.348 184 120 5 253 436 281 454 1.85e-14 75.9
MS.gene92080.t1 AT1G78270 27.717 184 124 5 253 436 283 457 2.24e-14 75.5
MS.gene92080.t1 AT2G26480 27.468 233 147 8 221 445 209 427 8.16e-14 73.6
MS.gene92080.t1 AT5G05900 26.230 244 158 10 207 436 205 440 2.54e-13 72.0
MS.gene92080.t1 AT1G22340 26.087 184 127 4 253 436 284 458 3.68e-13 71.6
MS.gene92080.t1 AT1G22380 28.804 184 121 5 253 436 284 457 9.05e-13 70.5
MS.gene92080.t1 AT3G46720 30.508 177 100 7 257 428 254 412 2.63e-12 68.9
MS.gene92080.t1 AT1G22360 30.282 142 96 3 253 394 281 419 1.64e-11 66.6
MS.gene92080.t1 AT4G34135 24.928 345 195 16 7 309 10 332 7.79e-11 63.9

Find 84 sgRNAs with CRISPR-Local

Find 99 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTAAACCTGTTCTGCTTTC+AGG 0.094372 2.4:+15882171 MS.gene92080:CDS
AAAGGAAAAGGAATTGTTTA+TGG 0.231240 2.4:+15882441 MS.gene92080:CDS
TCCCACAGAAAACTAGAATT+TGG 0.233485 2.4:+15882030 MS.gene92080:CDS
AGGATATTGAACTTCTTCTA+AGG 0.265020 2.4:+15881767 MS.gene92080:CDS
AAATGGTTAAAATGGCTTAA+AGG 0.265256 2.4:+15882234 MS.gene92080:CDS
CCAAGGTAAGCTGATGATAT+TGG 0.272835 2.4:-15881889 None:intergenic
ATCACAGTTCCTCATGTTAA+TGG 0.297077 2.4:+15881661 MS.gene92080:CDS
TCATTCTTGCATTCATGATA+TGG 0.306881 2.4:-15882599 None:intergenic
AAGGAATTGTTTATGGAAGT+TGG 0.308496 2.4:+15882448 MS.gene92080:CDS
GGGTTTAATGAAAGAGTTAA+AGG 0.311231 2.4:+15882423 MS.gene92080:CDS
ACTCTTTCATTAAACCCTTC+AGG 0.318561 2.4:-15882417 None:intergenic
TTCATGCGAATAAAACTTGA+TGG 0.329442 2.4:-15881992 None:intergenic
GGAACAAAGGTAATAAGATT+TGG 0.340347 2.4:-15881637 None:intergenic
GATCTCATGAAACCACCTTC+AGG 0.343673 2.4:+15881955 MS.gene92080:CDS
TTGCTTGGTCTTGAATTAAC+AGG 0.345544 2.4:+15882333 MS.gene92080:CDS
GTTCAATATCCTTCTCAGTT+TGG 0.347676 2.4:-15881756 None:intergenic
TAAAACTTGATGGATGAATC+AGG 0.371051 2.4:-15881982 None:intergenic
GCCACTAAAAGCTACATTAG+AGG 0.374293 2.4:+15882209 MS.gene92080:CDS
TTTAGTGGCTCAGGTAATAT+AGG 0.376028 2.4:-15882195 None:intergenic
GCAGCACTTAAGCCACCTAT+TGG 0.380205 2.4:+15882369 MS.gene92080:CDS
GGCTTAAGTGCTGCAAGAAA+TGG 0.387827 2.4:-15882360 None:intergenic
TTGTTAGAGAGGCGGAGAAA+TGG 0.392849 2.4:-15881535 None:intergenic
TTACACGATCGCTCTGACAT+AGG 0.396357 2.4:+15882066 MS.gene92080:CDS
AATGTTTCCATGGTTTGCTA+TGG 0.406344 2.4:+15881501 MS.gene92080:CDS
AAAGGATGCAGAGAAATTGA+TGG 0.417369 2.4:+15882117 MS.gene92080:CDS
CAGTTTCAAGCGTTGTTGCT+TGG 0.420003 2.4:+15882318 MS.gene92080:CDS
AAATCAAAGAAAACTATTTG+TGG 0.424765 2.4:-15881799 None:intergenic
AATGAAAGAGTTAAAGGAAA+AGG 0.433814 2.4:+15882429 MS.gene92080:CDS
TCTGTGGTTTATTGTGCATA+TGG 0.439244 2.4:+15882270 MS.gene92080:CDS
ATCTCATGAAACCACCTTCA+GGG 0.449830 2.4:+15881956 MS.gene92080:CDS
TTAACATGAGGAACTGTGAT+AGG 0.452014 2.4:-15881658 None:intergenic
ATGTTTCCATGGTTTGCTAT+GGG 0.453158 2.4:+15881502 MS.gene92080:CDS
ATGGATGATGAGAATGAAGT+TGG 0.453273 2.4:+15882717 MS.gene92080:CDS
TCAATAGTCTGAAATCCAAT+AGG 0.454018 2.4:-15882384 None:intergenic
TCTAACAAATTAGCAATAAG+AGG 0.459115 2.4:+15881550 MS.gene92080:CDS
ATAGGACCTGAAAGCAGAAC+AGG 0.461457 2.4:-15882177 None:intergenic
CTTGCATTCATGATATGGTC+AGG 0.468145 2.4:-15882594 None:intergenic
GTTGAGAAAGGTGATGAAGA+TGG 0.473698 2.4:+15882651 MS.gene92080:CDS
ATCCTTCTCAGTTTGGTCCA+TGG 0.480528 2.4:-15881749 None:intergenic
TTGAAGAAGCTTTACCTGAA+GGG 0.490189 2.4:+15882403 MS.gene92080:CDS
AATCTTCCTTGACTATGTCT+TGG 0.492827 2.4:-15881919 None:intergenic
CCCTCTCATTGCTACATCCA+TGG 0.494384 2.4:+15881732 MS.gene92080:CDS
TGCACATAGCAATGTTTCCA+TGG 0.504753 2.4:+15881491 MS.gene92080:CDS
TCAGATGCAGTTGCTTTCAA+AGG 0.514738 2.4:+15882099 MS.gene92080:CDS
CCAATATCATCAGCTTACCT+TGG 0.525225 2.4:+15881889 MS.gene92080:CDS
TATGTCTTGGTATATTTCCA+AGG 0.530714 2.4:-15881906 None:intergenic
TGTTTCCATGGTTTGCTATG+GGG 0.545112 2.4:+15881503 MS.gene92080:CDS
GGATATTGAACTTCTTCTAA+GGG 0.545788 2.4:+15881768 MS.gene92080:CDS
GTTGGTGTAGAAGTTGAGAA+AGG 0.554703 2.4:+15882639 MS.gene92080:CDS
AGGATTCAAACCTGGTTCTG+TGG 0.559933 2.4:+15882254 MS.gene92080:CDS
TGGAGCTGCTTCTATAACTG+AGG 0.562901 2.4:+15882527 MS.gene92080:CDS
AGAAAACTAGAATTTGGAAG+TGG 0.563912 2.4:+15882036 MS.gene92080:CDS
TATTGTGCATATGGAAGTGA+AGG 0.565062 2.4:+15882279 MS.gene92080:CDS
ATTGAAGAAGCTTTACCTGA+AGG 0.566056 2.4:+15882402 MS.gene92080:CDS
ATTGCTATGTGCAAAGGAGG+AGG 0.570238 2.4:-15881481 None:intergenic
GCACAATAAACCACAGAACC+AGG 0.572498 2.4:-15882264 None:intergenic
TTATTGCTAATTTGTTAGAG+AGG 0.575257 2.4:-15881546 None:intergenic
TGGCTTAAAGGATTCAAACC+TGG 0.583848 2.4:+15882246 MS.gene92080:CDS
AATGATGAGTGAAAAGATGA+AGG 0.586314 2.4:+15882617 MS.gene92080:CDS
AATGAGAGGGAATAAAGAAG+AGG 0.588167 2.4:-15881719 None:intergenic
ATGAGTGAAAAGATGAAGGT+TGG 0.593081 2.4:+15882621 MS.gene92080:CDS
AACATTGCTATGTGCAAAGG+AGG 0.593375 2.4:-15881484 None:intergenic
CAAAGGAGGAGGAGAATCCA+TGG 0.596316 2.4:-15881470 None:intergenic
GGAAACATTGCTATGTGCAA+AGG 0.601320 2.4:-15881487 None:intergenic
AAAACTTGATGGATGAATCA+GGG 0.602785 2.4:-15881981 None:intergenic
ACTTGTTAACACGTGTCAGT+TGG 0.603876 2.4:+15882551 MS.gene92080:CDS
ATGAGAGGGAATAAAGAAGA+GGG 0.605864 2.4:-15881718 None:intergenic
TTGCTAATTTGTTAGAGAGG+CGG 0.613040 2.4:-15881543 None:intergenic
GATGAATCAGGGAACCCTGA+AGG 0.613809 2.4:-15881970 None:intergenic
CCATGGATGTAGCAATGAGA+GGG 0.615112 2.4:-15881732 None:intergenic
CAAAGCTGTGAGAATTGTGA+TGG 0.617527 2.4:+15882698 MS.gene92080:CDS
ATCCATGGACCAAACTGAGA+AGG 0.618561 2.4:+15881747 MS.gene92080:CDS
ATAGTCTGAAATCCAATAGG+TGG 0.626788 2.4:-15882381 None:intergenic
AGGAACTGTGATAGGAACAA+AGG 0.628656 2.4:-15881650 None:intergenic
GTTATGAAACATCCAACAGA+AGG 0.628836 2.4:-15882498 None:intergenic
TCCATGGATGTAGCAATGAG+AGG 0.638914 2.4:-15881733 None:intergenic
AATATACCAAGACATAGTCA+AGG 0.642666 2.4:+15881913 MS.gene92080:CDS
GGAGCTGCTTCTATAACTGA+GGG 0.647559 2.4:+15882528 MS.gene92080:CDS
GAATCAGGGAACCCTGAAGG+TGG 0.649118 2.4:-15881967 None:intergenic
AAGTGCCCCATAGCAAACCA+TGG 0.661811 2.4:-15881508 None:intergenic
GAAGTAGTTTCAGCATCATG+AGG 0.663497 2.4:-15881688 None:intergenic
TGAGGAAGACCATTAACATG+AGG 0.685206 2.4:-15881670 None:intergenic
ATATGGTCAGGATCTACACG+TGG 0.742139 2.4:-15882582 None:intergenic
GGATGTTTCATAACACACTG+TGG 0.766209 2.4:+15882507 MS.gene92080:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTCTTTGATTTTCAATAT+TGG + chr2.4:15881809-15881828 MS.gene92080:CDS 15.0%
!! AAATCAAAGAAAACTATTTG+TGG - chr2.4:15881802-15881821 None:intergenic 20.0%
!!! AATTATCTTCAAACTGTTTT+TGG + chr2.4:15882150-15882169 MS.gene92080:CDS 20.0%
!!! TGAAACTGATTTTTTTCTAA+TGG - chr2.4:15882306-15882325 None:intergenic 20.0%
! AAAGGAAAAGGAATTGTTTA+TGG + chr2.4:15882441-15882460 MS.gene92080:CDS 25.0%
! AAATGGTTAAAATGGCTTAA+AGG + chr2.4:15882234-15882253 MS.gene92080:CDS 25.0%
! AATGAAAGAGTTAAAGGAAA+AGG + chr2.4:15882429-15882448 MS.gene92080:CDS 25.0%
! TAGAGGAAAAATGGTTAAAA+TGG + chr2.4:15882226-15882245 MS.gene92080:CDS 25.0%
! TCTAACAAATTAGCAATAAG+AGG + chr2.4:15881550-15881569 MS.gene92080:CDS 25.0%
!!! TTATTGCTAATTTGTTAGAG+AGG - chr2.4:15881549-15881568 None:intergenic 25.0%
AAGCTACATTAGAGGAAAAA+TGG + chr2.4:15882217-15882236 MS.gene92080:CDS 30.0%
AAGGAATTGTTTATGGAAGT+TGG + chr2.4:15882448-15882467 MS.gene92080:CDS 30.0%
AATATACCAAGACATAGTCA+AGG + chr2.4:15881913-15881932 MS.gene92080:CDS 30.0%
AATGATGAGTGAAAAGATGA+AGG + chr2.4:15882617-15882636 MS.gene92080:CDS 30.0%
AGAAAACTAGAATTTGGAAG+TGG + chr2.4:15882036-15882055 MS.gene92080:CDS 30.0%
AGGATATTGAACTTCTTCTA+AGG + chr2.4:15881767-15881786 MS.gene92080:CDS 30.0%
GGAACAAAGGTAATAAGATT+TGG - chr2.4:15881640-15881659 None:intergenic 30.0%
GGATATTGAACTTCTTCTAA+GGG + chr2.4:15881768-15881787 MS.gene92080:CDS 30.0%
GGGTTTAATGAAAGAGTTAA+AGG + chr2.4:15882423-15882442 MS.gene92080:CDS 30.0%
TATGTCTTGGTATATTTCCA+AGG - chr2.4:15881909-15881928 None:intergenic 30.0%
TCATTCTTGCATTCATGATA+TGG - chr2.4:15882602-15882621 None:intergenic 30.0%
TTCATGCGAATAAAACTTGA+TGG - chr2.4:15881995-15882014 None:intergenic 30.0%
! AAAACTTGATGGATGAATCA+GGG - chr2.4:15881984-15882003 None:intergenic 30.0%
! TAAAACTTGATGGATGAATC+AGG - chr2.4:15881985-15882004 None:intergenic 30.0%
! TCAATAGTCTGAAATCCAAT+AGG - chr2.4:15882387-15882406 None:intergenic 30.0%
!!! AACTTGTTGAGTGTTTTTTC+AGG - chr2.4:15881598-15881617 None:intergenic 30.0%
!!! ACTTGTTGAGTGTTTTTTCA+GGG - chr2.4:15881597-15881616 None:intergenic 30.0%
!!! ATTTTAGAACATCCTTCTGT+TGG + chr2.4:15882486-15882505 MS.gene92080:CDS 30.0%
!!! TCCAAATTCTAGTTTTCTGT+GGG - chr2.4:15882034-15882053 None:intergenic 30.0%
!!! TTCCAAATTCTAGTTTTCTG+TGG - chr2.4:15882035-15882054 None:intergenic 30.0%
AAAGGATGCAGAGAAATTGA+TGG + chr2.4:15882117-15882136 MS.gene92080:CDS 35.0%
AATCTTCCTTGACTATGTCT+TGG - chr2.4:15881922-15881941 None:intergenic 35.0%
AATGAGAGGGAATAAAGAAG+AGG - chr2.4:15881722-15881741 None:intergenic 35.0%
ACTCTTTCATTAAACCCTTC+AGG - chr2.4:15882420-15882439 None:intergenic 35.0%
ATCACAGTTCCTCATGTTAA+TGG + chr2.4:15881661-15881680 MS.gene92080:CDS 35.0%
ATGAGAGGGAATAAAGAAGA+GGG - chr2.4:15881721-15881740 None:intergenic 35.0%
ATGAGTGAAAAGATGAAGGT+TGG + chr2.4:15882621-15882640 MS.gene92080:CDS 35.0%
ATGGATGATGAGAATGAAGT+TGG + chr2.4:15882717-15882736 MS.gene92080:CDS 35.0%
ATTGAAGAAGCTTTACCTGA+AGG + chr2.4:15882402-15882421 MS.gene92080:CDS 35.0%
CCAAACTTGACTCAAAAACT+TGG + chr2.4:15881835-15881854 MS.gene92080:CDS 35.0%
GTTATGAAACATCCAACAGA+AGG - chr2.4:15882501-15882520 None:intergenic 35.0%
GTTCAATATCCTTCTCAGTT+TGG - chr2.4:15881759-15881778 None:intergenic 35.0%
TATTGTGCATATGGAAGTGA+AGG + chr2.4:15882279-15882298 MS.gene92080:CDS 35.0%
TCCCACAGAAAACTAGAATT+TGG + chr2.4:15882030-15882049 MS.gene92080:CDS 35.0%
TCTGTGGTTTATTGTGCATA+TGG + chr2.4:15882270-15882289 MS.gene92080:CDS 35.0%
TTAACATGAGGAACTGTGAT+AGG - chr2.4:15881661-15881680 None:intergenic 35.0%
TTGAAGAAGCTTTACCTGAA+GGG + chr2.4:15882403-15882422 MS.gene92080:CDS 35.0%
TTTAGTGGCTCAGGTAATAT+AGG - chr2.4:15882198-15882217 None:intergenic 35.0%
! ATAGTCTGAAATCCAATAGG+TGG - chr2.4:15882384-15882403 None:intergenic 35.0%
! TAGTTTTCTGTGGGAAACTA+GGG - chr2.4:15882025-15882044 None:intergenic 35.0%
! TCCTCTAATGTAGCTTTTAG+TGG - chr2.4:15882213-15882232 None:intergenic 35.0%
!! AATGTTTCCATGGTTTGCTA+TGG + chr2.4:15881501-15881520 MS.gene92080:CDS 35.0%
!! ATGTTTCCATGGTTTGCTAT+GGG + chr2.4:15881502-15881521 MS.gene92080:CDS 35.0%
!! TTGCTAATTTGTTAGAGAGG+CGG - chr2.4:15881546-15881565 None:intergenic 35.0%
!! TTGCTTGGTCTTGAATTAAC+AGG + chr2.4:15882333-15882352 MS.gene92080:CDS 35.0%
!!! CCAAGTTTTTGAGTCAAGTT+TGG - chr2.4:15881838-15881857 None:intergenic 35.0%
AACATTGCTATGTGCAAAGG+AGG - chr2.4:15881487-15881506 None:intergenic 40.0%
AGGAACTGTGATAGGAACAA+AGG - chr2.4:15881653-15881672 None:intergenic 40.0%
ATCTCATGAAACCACCTTCA+GGG + chr2.4:15881956-15881975 MS.gene92080:CDS 40.0%
CAAAGCTGTGAGAATTGTGA+TGG + chr2.4:15882698-15882717 MS.gene92080:CDS 40.0%
CCAAGGTAAGCTGATGATAT+TGG - chr2.4:15881892-15881911 None:intergenic 40.0%
CCAATATCATCAGCTTACCT+TGG + chr2.4:15881889-15881908 MS.gene92080:CDS 40.0%
CTTGCATTCATGATATGGTC+AGG - chr2.4:15882597-15882616 None:intergenic 40.0%
GAAGTAGTTTCAGCATCATG+AGG - chr2.4:15881691-15881710 None:intergenic 40.0%
GCCACTAAAAGCTACATTAG+AGG + chr2.4:15882209-15882228 MS.gene92080:CDS 40.0%
GGAAACATTGCTATGTGCAA+AGG - chr2.4:15881490-15881509 None:intergenic 40.0%
GGATGTTTCATAACACACTG+TGG + chr2.4:15882507-15882526 MS.gene92080:CDS 40.0%
GTTGAGAAAGGTGATGAAGA+TGG + chr2.4:15882651-15882670 MS.gene92080:CDS 40.0%
GTTGGTGTAGAAGTTGAGAA+AGG + chr2.4:15882639-15882658 MS.gene92080:CDS 40.0%
TGAGGAAGACCATTAACATG+AGG - chr2.4:15881673-15881692 None:intergenic 40.0%
TGCACATAGCAATGTTTCCA+TGG + chr2.4:15881491-15881510 MS.gene92080:CDS 40.0%
TGGCTTAAAGGATTCAAACC+TGG + chr2.4:15882246-15882265 MS.gene92080:CDS 40.0%
! AATGTAGCTTTTAGTGGCTC+AGG - chr2.4:15882207-15882226 None:intergenic 40.0%
! ACTTGTTAACACGTGTCAGT+TGG + chr2.4:15882551-15882570 MS.gene92080:CDS 40.0%
! TCAGATGCAGTTGCTTTCAA+AGG + chr2.4:15882099-15882118 MS.gene92080:CDS 40.0%
!! CTAGTTTTCTGTGGGAAACT+AGG - chr2.4:15882026-15882045 None:intergenic 40.0%
!! TGTTTCCATGGTTTGCTATG+GGG + chr2.4:15881503-15881522 MS.gene92080:CDS 40.0%
ATAGGACCTGAAAGCAGAAC+AGG - chr2.4:15882180-15882199 None:intergenic 45.0%
ATATGGTCAGGATCTACACG+TGG - chr2.4:15882585-15882604 None:intergenic 45.0%
ATCCATGGACCAAACTGAGA+AGG + chr2.4:15881747-15881766 MS.gene92080:CDS 45.0%
ATCCTTCTCAGTTTGGTCCA+TGG - chr2.4:15881752-15881771 None:intergenic 45.0%
ATTGCTATGTGCAAAGGAGG+AGG - chr2.4:15881484-15881503 None:intergenic 45.0%
CCATGGATGTAGCAATGAGA+GGG - chr2.4:15881735-15881754 None:intergenic 45.0%
GATCTCATGAAACCACCTTC+AGG + chr2.4:15881955-15881974 MS.gene92080:CDS 45.0%
GCACAATAAACCACAGAACC+AGG - chr2.4:15882267-15882286 None:intergenic 45.0%
GGAGCTGCTTCTATAACTGA+GGG + chr2.4:15882528-15882547 MS.gene92080:CDS 45.0%
GGTAAACCTGTTCTGCTTTC+AGG + chr2.4:15882171-15882190 MS.gene92080:CDS 45.0%
TCCATGGATGTAGCAATGAG+AGG - chr2.4:15881736-15881755 None:intergenic 45.0%
TGGAGCTGCTTCTATAACTG+AGG + chr2.4:15882527-15882546 MS.gene92080:CDS 45.0%
TTACACGATCGCTCTGACAT+AGG + chr2.4:15882066-15882085 MS.gene92080:CDS 45.0%
TTGTTAGAGAGGCGGAGAAA+TGG - chr2.4:15881538-15881557 None:intergenic 45.0%
! CAGTTTCAAGCGTTGTTGCT+TGG + chr2.4:15882318-15882337 MS.gene92080:CDS 45.0%
! GGCTTAAGTGCTGCAAGAAA+TGG - chr2.4:15882363-15882382 None:intergenic 45.0%
!! AGGATTCAAACCTGGTTCTG+TGG + chr2.4:15882254-15882273 MS.gene92080:CDS 45.0%
AAGTGCCCCATAGCAAACCA+TGG - chr2.4:15881511-15881530 None:intergenic 50.0%
CCCTCTCATTGCTACATCCA+TGG + chr2.4:15881732-15881751 MS.gene92080:CDS 50.0%
GATGAATCAGGGAACCCTGA+AGG - chr2.4:15881973-15881992 None:intergenic 50.0%
GCAGCACTTAAGCCACCTAT+TGG + chr2.4:15882369-15882388 MS.gene92080:CDS 50.0%
GAATCAGGGAACCCTGAAGG+TGG - chr2.4:15881970-15881989 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 15881472 15882848 15881472 ID=MS.gene92080
chr2.4 mRNA 15881472 15882848 15881472 ID=MS.gene92080.t1;Parent=MS.gene92080
chr2.4 exon 15881472 15882848 15881472 ID=MS.gene92080.t1.exon1;Parent=MS.gene92080.t1
chr2.4 CDS 15881472 15882848 15881472 ID=cds.MS.gene92080.t1;Parent=MS.gene92080.t1
Gene Sequence

>MS.gene92080

ATGGATTCTCCTCCTCCTTTGCACATAGCAATGTTTCCATGGTTTGCTATGGGGCACTTAACTCCATTTCTCCGCCTCTCTAACAAATTAGCAATAAGAGGTCACAAAATCTCATTCTTCATCCCTGAAAAAACACTCAACAAGTTACAATATCTCAATCTTCATCCAAATCTTATTACCTTTGTTCCTATCACAGTTCCTCATGTTAATGGTCTTCCTCATGATGCTGAAACTACTTCAGATGTACCCTCTTCTTTATTCCCTCTCATTGCTACATCCATGGACCAAACTGAGAAGGATATTGAACTTCTTCTAAGGGAACTAAAGCCACAAATAGTTTTCTTTGATTTTCAATATTGGCTGCCAAACTTGACTCAAAAACTTGGTATCAAAAGTCTTCAATACTTGATATGCAATCCAATATCATCAGCTTACCTTGGAAATATACCAAGACATAGTCAAGGAAGATTTTTAACTGAATTTGATCTCATGAAACCACCTTCAGGGTTCCCTGATTCATCCATCAAGTTTTATTCGCATGAAATTCGTGCCCTAGTTTCCCACAGAAAACTAGAATTTGGAAGTGGTGTTTTATTACACGATCGCTCTGACATAGGCACAAAGTTTTCAGATGCAGTTGCTTTCAAAGGATGCAGAGAAATTGATGGCTTATATGCTAATTATCTTCAAACTGTTTTTGGTAAACCTGTTCTGCTTTCAGGTCCTATATTACCTGAGCCACTAAAAGCTACATTAGAGGAAAAATGGTTAAAATGGCTTAAAGGATTCAAACCTGGTTCTGTGGTTTATTGTGCATATGGAAGTGAAGGTCCATTAGAAAAAAATCAGTTTCAAGCGTTGTTGCTTGGTCTTGAATTAACAGGTTTTCCATTTCTTGCAGCACTTAAGCCACCTATTGGATTTCAGACTATTGAAGAAGCTTTACCTGAAGGGTTTAATGAAAGAGTTAAAGGAAAAGGAATTGTTTATGGAAGTTGGATTCAACAACAATTGATTTTAGAACATCCTTCTGTTGGATGTTTCATAACACACTGTGGAGCTGCTTCTATAACTGAGGGACTTGTTAACACGTGTCAGTTGGTGTTCTTGCCACGTGTAGATCCTGACCATATCATGAATGCAAGAATGATGAGTGAAAAGATGAAGGTTGGTGTAGAAGTTGAGAAAGGTGATGAAGATGGATTGTTTACAAAAGAAAGTGTGAGCAAAGCTGTGAGAATTGTGATGGATGATGAGAATGAAGTTGGAAGAGAAGTGAGAGCTAATCATGCTAAACTGAGAAACTTTTTATTGAGAAGCAATTTAGAATCTTCATGTGTTGATAATTTCTGTCAAAAACTCTACGATTTGCTCTAG

Protein sequence

>MS.gene92080.t1

MDSPPPLHIAMFPWFAMGHLTPFLRLSNKLAIRGHKISFFIPEKTLNKLQYLNLHPNLITFVPITVPHVNGLPHDAETTSDVPSSLFPLIATSMDQTEKDIELLLRELKPQIVFFDFQYWLPNLTQKLGIKSLQYLICNPISSAYLGNIPRHSQGRFLTEFDLMKPPSGFPDSSIKFYSHEIRALVSHRKLEFGSGVLLHDRSDIGTKFSDAVAFKGCREIDGLYANYLQTVFGKPVLLSGPILPEPLKATLEEKWLKWLKGFKPGSVVYCAYGSEGPLEKNQFQALLLGLELTGFPFLAALKPPIGFQTIEEALPEGFNERVKGKGIVYGSWIQQQLILEHPSVGCFITHCGAASITEGLVNTCQLVFLPRVDPDHIMNARMMSEKMKVGVEVEKGDEDGLFTKESVSKAVRIVMDDENEVGREVRANHAKLRNFLLRSNLESSCVDNFCQKLYDLL