AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene073184


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene073184.t1 MTR_2g083490 93.464 459 30 0 1 459 1 459 0.0 862
MS.gene073184.t1 MTR_2g083380 89.542 459 48 0 1 459 18 476 0.0 835
MS.gene073184.t1 MTR_2g083480 64.989 457 160 0 1 457 1 457 0.0 621
MS.gene073184.t1 MTR_2g083430 67.544 456 146 1 3 458 5 458 0.0 619
MS.gene073184.t1 MTR_4g079250 61.087 460 175 3 1 458 1 458 0.0 597
MS.gene073184.t1 MTR_4g079270 61.605 461 173 3 1 459 1 459 0.0 597
MS.gene073184.t1 MTR_2g083390 62.227 458 149 1 1 458 1 434 0.0 586
MS.gene073184.t1 MTR_2g083420 61.135 458 154 1 1 458 1 434 0.0 585
MS.gene073184.t1 MTR_2g014900 56.195 452 197 1 8 459 7 457 0.0 539
MS.gene073184.t1 MTR_2g086283 64.365 449 48 5 11 459 1 337 0.0 530
MS.gene073184.t1 MTR_2g083360 49.115 452 125 4 7 458 28 374 4.02e-141 409
MS.gene073184.t1 MTR_1g090270 42.950 461 245 10 7 458 14 465 3.00e-124 369
MS.gene073184.t1 MTR_4g059370 41.076 353 175 9 131 458 48 392 2.01e-86 270
MS.gene073184.t1 MTR_8g068330 33.192 473 286 14 1 455 1 461 5.72e-70 229
MS.gene073184.t1 MTR_2g008225 33.049 469 283 13 2 454 9 462 2.20e-67 223
MS.gene073184.t1 MTR_2g008220 33.262 469 282 14 2 454 8 461 1.74e-66 221
MS.gene073184.t1 MTR_8g068360 32.773 476 289 15 2 459 6 468 5.50e-65 216
MS.gene073184.t1 MTR_6g036650 31.809 481 281 11 1 456 11 469 4.19e-64 214
MS.gene073184.t1 MTR_7g067330 32.903 465 260 15 2 455 3 426 1.33e-63 212
MS.gene073184.t1 MTR_4g123553 32.347 473 270 17 7 456 14 459 8.57e-63 211
MS.gene073184.t1 MTR_4g079280 46.053 228 78 2 11 238 1 183 1.85e-62 201
MS.gene073184.t1 MTR_8g068340 31.398 465 303 11 2 455 6 465 1.52e-61 207
MS.gene073184.t1 MTR_2g008226 33.962 477 269 21 7 455 9 467 1.91e-61 207
MS.gene073184.t1 MTR_6g042310 32.196 469 280 15 6 457 16 463 4.50e-61 206
MS.gene073184.t1 MTR_7g067120 32.403 466 261 15 2 455 3 426 2.14e-60 204
MS.gene073184.t1 MTR_2g046620 31.624 468 280 15 7 456 15 460 2.33e-60 204
MS.gene073184.t1 MTR_2g014930 38.408 289 98 5 17 305 9 217 1.23e-53 179
MS.gene073184.t1 MTR_8g007650 31.210 471 299 11 6 459 5 467 1.84e-53 186
MS.gene073184.t1 MTR_4g077960 30.670 463 271 14 17 456 1 436 7.12e-53 184
MS.gene073184.t1 MTR_8g007565 30.998 471 300 11 6 459 5 467 1.28e-52 184
MS.gene073184.t1 MTR_5g066410 30.638 470 278 12 11 459 1 443 1.01e-51 181
MS.gene073184.t1 MTR_1g090280 43.478 184 99 3 279 458 133 315 1.28e-46 164
MS.gene073184.t1 MTR_3g435310 29.847 459 256 14 7 456 17 418 3.78e-46 166
MS.gene073184.t1 MTR_2g083440 60.784 102 40 0 357 458 11 112 1.18e-38 136
MS.gene073184.t1 MTR_8g071070 27.044 477 315 14 5 457 4 471 6.67e-36 139
MS.gene073184.t1 MTR_8g009055 26.395 466 289 15 6 439 4 447 1.08e-31 127
MS.gene073184.t1 MTR_8g009050 27.957 465 273 15 6 434 4 442 2.26e-31 125
MS.gene073184.t1 MTR_1g062380 27.412 456 275 17 5 418 13 454 3.34e-31 125
MS.gene073184.t1 MTR_8g066610 26.157 497 310 17 1 457 1 480 4.71e-31 125
MS.gene073184.t1 MTR_4g031800 26.667 465 280 18 7 434 8 448 6.04e-31 125
MS.gene073184.t1 MTR_0009s0240 26.667 480 298 19 5 458 4 455 6.96e-31 124
MS.gene073184.t1 MTR_8g009073 29.122 467 263 19 6 434 4 440 5.84e-30 122
MS.gene073184.t1 MTR_7g070660 26.282 468 285 17 5 433 8 454 6.29e-30 122
MS.gene073184.t1 MTR_8g008990 26.496 468 288 15 6 439 4 449 7.41e-30 121
MS.gene073184.t1 MTR_2g098430 25.738 474 291 18 9 443 7 458 1.32e-29 121
MS.gene073184.t1 MTR_5g035580 26.872 454 275 13 5 433 10 431 1.54e-28 117
MS.gene073184.t1 MTR_5g045970 27.754 472 287 18 5 436 13 470 2.17e-28 117
MS.gene073184.t1 MTR_7g070740 25.000 468 295 14 5 433 8 458 3.38e-28 117
MS.gene073184.t1 MTR_4g485620 26.562 448 282 13 20 436 1 432 3.42e-28 116
MS.gene073184.t1 MTR_5g087620 26.059 472 286 19 8 433 10 464 5.30e-28 116
MS.gene073184.t1 MTR_5g035560 26.096 479 290 16 5 454 8 451 5.57e-28 116
MS.gene073184.t1 MTR_8g009073 31.250 304 175 11 151 434 22 311 1.27e-27 113
MS.gene073184.t1 MTR_8g466240 27.700 426 253 16 1 398 1 399 2.37e-27 114
MS.gene073184.t1 MTR_8g006710 26.281 449 284 17 9 427 7 438 2.53e-27 114
MS.gene073184.t1 MTR_6g038220 26.593 455 274 18 8 436 11 431 3.50e-27 114
MS.gene073184.t1 MTR_6g038240 25.942 451 283 18 8 436 11 432 5.55e-27 113
MS.gene073184.t1 MTR_8g009063 26.190 462 286 16 6 436 11 448 6.03e-27 113
MS.gene073184.t1 MTR_4g117950 25.567 485 287 15 1 437 1 459 1.50e-26 112
MS.gene073184.t1 MTR_7g013220 24.947 473 273 15 8 439 5 436 2.17e-26 111
MS.gene073184.t1 MTR_8g006730 24.222 450 303 13 8 431 6 443 2.44e-26 111
MS.gene073184.t1 MTR_0184s0040 27.044 477 271 18 6 439 19 461 3.09e-26 111
MS.gene073184.t1 MTR_0078s0190 27.044 477 271 18 6 439 19 461 3.09e-26 111
MS.gene073184.t1 MTR_7g117405 27.983 461 286 20 8 436 12 458 5.38e-26 110
MS.gene073184.t1 MTR_7g071040 25.212 472 290 15 5 433 14 465 5.66e-26 110
MS.gene073184.t1 MTR_7g070800 25.641 468 289 17 5 433 3 450 6.11e-26 110
MS.gene073184.t1 MTR_6g038200 26.549 452 279 18 8 436 11 432 6.93e-26 110
MS.gene073184.t1 MTR_8g009067 26.681 461 282 16 6 434 4 440 7.82e-26 110
MS.gene073184.t1 MTR_8g077590 30.149 335 189 8 112 427 115 423 8.45e-26 110
MS.gene073184.t1 MTR_8g027870 25.664 452 298 13 9 439 19 453 1.25e-25 109
MS.gene073184.t1 MTR_7g070810 25.901 444 288 13 7 421 8 439 1.40e-25 109
MS.gene073184.t1 MTR_6g038230 26.269 453 279 18 8 436 11 432 2.05e-25 108
MS.gene073184.t1 MTR_0078s0010 26.395 466 278 16 6 434 4 441 2.15e-25 108
MS.gene073184.t1 MTR_6g033615 36.047 172 104 4 258 427 252 419 2.38e-25 108
MS.gene073184.t1 MTR_7g055710 24.359 468 298 15 5 433 8 458 2.54e-25 108
MS.gene073184.t1 MTR_8g012635 28.497 386 230 11 81 435 78 448 2.92e-25 108
MS.gene073184.t1 MTR_7g102450 25.926 459 290 15 8 436 11 449 4.17e-25 108
MS.gene073184.t1 MTR_0078s0060 26.395 466 279 17 6 435 4 441 5.48e-25 107
MS.gene073184.t1 MTR_7g070610 24.524 473 292 15 5 433 10 461 8.20e-25 107
MS.gene073184.t1 MTR_8g009067 28.788 330 201 10 125 434 7 322 1.14e-24 105
MS.gene073184.t1 MTR_8g027885 25.885 452 297 13 9 439 19 453 1.52e-24 106
MS.gene073184.t1 MTR_6g023665 30.085 236 147 5 207 427 212 444 1.68e-24 106
MS.gene073184.t1 MTR_8g465670 24.889 450 303 12 9 434 8 446 1.75e-24 106
MS.gene073184.t1 MTR_8g006270 28.531 354 215 12 117 449 114 450 1.84e-24 105
MS.gene073184.t1 MTR_4g024020 25.314 478 296 16 1 436 4 462 2.42e-24 105
MS.gene073184.t1 MTR_3g009510 31.963 219 126 5 236 436 241 454 2.46e-24 105
MS.gene073184.t1 MTR_7g070940 23.904 456 302 13 7 433 8 447 3.12e-24 105
MS.gene073184.t1 MTR_6g488280 34.254 181 106 3 259 427 258 437 3.99e-24 105
MS.gene073184.t1 MTR_0428s0010 34.254 181 106 3 259 427 258 437 3.99e-24 105
MS.gene073184.t1 MTR_0536s0020 25.536 466 290 16 6 435 16 460 4.07e-24 105
MS.gene073184.t1 MTR_8g012650 28.286 350 211 10 112 435 113 448 5.57e-24 104
MS.gene073184.t1 MTR_0536s0010 25.778 450 280 16 1 421 16 440 5.64e-24 104
MS.gene073184.t1 MTR_5g027210 27.309 249 148 3 212 428 212 459 6.13e-24 104
MS.gene073184.t1 MTR_6g033625 36.047 172 104 4 258 427 266 433 6.36e-24 104
MS.gene073184.t1 MTR_7g013180 25.463 432 279 16 8 419 5 413 6.62e-24 103
MS.gene073184.t1 MTR_7g013200 24.892 462 272 16 8 437 5 423 1.20e-23 103
MS.gene073184.t1 MTR_6g033725 36.313 179 108 4 258 434 263 437 1.47e-23 103
MS.gene073184.t1 MTR_6g038300 25.328 458 278 18 8 436 11 433 1.63e-23 103
MS.gene073184.t1 MTR_4g485590 28.049 410 235 15 8 394 9 381 2.01e-23 102
MS.gene073184.t1 MTR_2g059240 26.877 413 266 10 8 397 13 412 2.01e-23 102
MS.gene073184.t1 MTR_8g006220 24.945 457 302 12 9 434 7 453 2.02e-23 103
MS.gene073184.t1 MTR_0184s0030 29.836 305 179 11 162 449 168 454 2.09e-23 102
MS.gene073184.t1 MTR_6g033675 26.822 343 219 11 109 434 113 440 2.33e-23 102
MS.gene073184.t1 MTR_7g070780 23.667 469 296 15 7 433 10 458 2.72e-23 102
MS.gene073184.t1 MTR_7g070930 24.896 482 293 15 1 433 1 462 2.78e-23 102
MS.gene073184.t1 MTR_7g047030 26.407 462 279 17 8 434 6 441 3.41e-23 102
MS.gene073184.t1 MTR_7g047270 26.407 462 279 17 8 434 6 441 3.41e-23 102
MS.gene073184.t1 MTR_8g088560 26.638 473 266 17 5 438 7 437 3.51e-23 102
MS.gene073184.t1 MTR_7g102560 26.709 468 291 16 7 436 8 461 5.72e-23 101
MS.gene073184.t1 MTR_2g034990 24.130 460 303 16 7 438 10 451 5.84e-23 101
MS.gene073184.t1 MTR_4g117890 24.612 451 282 18 6 421 11 438 5.92e-23 101
MS.gene073184.t1 MTR_1g019510 24.893 466 293 18 6 439 4 444 6.64e-23 101
MS.gene073184.t1 MTR_6g035265 24.364 472 295 19 1 434 6 453 7.97e-23 101
MS.gene073184.t1 MTR_4g117980 23.861 461 295 16 7 429 10 452 8.46e-23 101
MS.gene073184.t1 MTR_7g070870 24.020 408 280 11 4 394 15 409 1.15e-22 100
MS.gene073184.t1 MTR_6g005600 27.515 338 201 9 123 434 124 443 1.23e-22 100
MS.gene073184.t1 MTR_7g117170 25.602 457 288 16 9 434 16 451 1.45e-22 100
MS.gene073184.t1 MTR_8g012730 35.079 191 106 4 259 435 99 285 1.55e-22 98.2
MS.gene073184.t1 MTR_7g046490 29.537 281 176 8 171 435 166 440 1.92e-22 100
MS.gene073184.t1 MTR_8g032950 23.195 457 297 17 7 427 11 449 1.93e-22 100
MS.gene073184.t1 MTR_4g082820 26.358 497 281 21 7 459 6 461 2.59e-22 99.8
MS.gene073184.t1 MTR_7g102460 26.261 476 289 20 2 436 5 459 2.89e-22 99.8
MS.gene073184.t1 MTR_1g107315 26.712 438 273 16 1 408 1 420 3.13e-22 99.4
MS.gene073184.t1 MTR_3g049970 24.524 473 277 16 7 434 8 445 3.49e-22 99.4
MS.gene073184.t1 MTR_4g117960 26.096 456 285 18 1 421 6 444 4.01e-22 99.4
MS.gene073184.t1 MTR_7g102520 34.715 193 114 5 254 436 276 466 4.25e-22 99.4
MS.gene073184.t1 MTR_7g102550 24.793 484 312 18 8 452 9 479 4.55e-22 99.0
MS.gene073184.t1 MTR_4g485630 27.484 473 257 23 7 429 8 444 5.18e-22 99.0
MS.gene073184.t1 MTR_6g033660 35.393 178 109 4 259 434 266 439 5.32e-22 99.0
MS.gene073184.t1 MTR_8g008970 25.597 461 287 17 6 434 4 440 6.58e-22 99.4
MS.gene073184.t1 MTR_8g008970 29.661 236 147 8 207 436 541 763 1.92e-15 79.3
MS.gene073184.t1 MTR_4g485640 32.189 233 133 7 220 428 409 640 7.64e-22 99.0
MS.gene073184.t1 MTR_5g016660 23.427 461 288 15 12 427 14 454 9.33e-22 98.2
MS.gene073184.t1 MTR_7g102490 25.577 477 293 20 2 436 5 461 9.72e-22 98.2
MS.gene073184.t1 MTR_5g039900 24.301 465 300 14 5 433 10 458 1.13e-21 97.8
MS.gene073184.t1 MTR_7g070910 23.125 480 290 15 5 433 8 459 1.57e-21 97.4
MS.gene073184.t1 MTR_8g083280 25.000 452 281 17 16 436 15 439 1.57e-21 97.4
MS.gene073184.t1 MTR_4g082810 27.901 405 250 16 7 384 6 395 1.59e-21 96.7
MS.gene073184.t1 MTR_6g035185 22.899 476 300 16 1 433 6 457 2.28e-21 97.1
MS.gene073184.t1 MTR_8g074550 24.848 495 280 17 1 434 1 464 2.61e-21 97.1
MS.gene073184.t1 MTR_1g107350 23.093 472 297 14 1 434 1 444 4.59e-21 95.9
MS.gene073184.t1 MTR_8g006260 30.500 200 123 6 241 427 246 442 5.64e-21 95.5
MS.gene073184.t1 MTR_1g032490 26.018 442 269 18 2 408 4 422 6.18e-21 95.5
MS.gene073184.t1 MTR_1g019520 32.821 195 112 5 258 439 5 193 7.58e-21 91.3
MS.gene073184.t1 MTR_8g012630 33.508 191 109 4 259 435 206 392 7.85e-21 94.7
MS.gene073184.t1 MTR_7g013240 24.242 429 281 16 8 420 6 406 8.13e-21 94.7
MS.gene073184.t1 MTR_5g045960 25.444 507 284 20 6 451 7 480 1.50e-20 94.4
MS.gene073184.t1 MTR_3g069690 29.333 225 141 6 220 434 209 425 1.92e-20 94.0
MS.gene073184.t1 MTR_4g108250 23.305 472 302 15 5 433 8 462 2.60e-20 94.0
MS.gene073184.t1 MTR_7g080935 24.183 459 289 16 5 438 8 432 3.10e-20 93.2
MS.gene073184.t1 MTR_3g009490 33.533 167 95 4 283 436 3 166 3.27e-20 88.6
MS.gene073184.t1 MTR_3g079480 24.236 458 288 14 8 427 21 457 3.77e-20 93.2
MS.gene073184.t1 MTR_2g046820 25.556 450 292 12 16 438 13 446 5.05e-20 92.8
MS.gene073184.t1 MTR_4g118000 25.236 424 272 16 7 408 11 411 7.04e-20 92.4
MS.gene073184.t1 MTR_7g012120 24.348 460 291 19 7 428 15 455 7.57e-20 92.4
MS.gene073184.t1 MTR_7g013260 23.953 430 282 16 8 420 6 407 7.64e-20 92.0
MS.gene073184.t1 MTR_5g072860 22.637 455 297 14 8 436 18 443 8.59e-20 92.0
MS.gene073184.t1 MTR_7g070860 23.922 464 284 16 7 433 6 437 1.00e-19 92.0
MS.gene073184.t1 MTR_7g080940 32.258 186 115 5 253 438 258 432 1.18e-19 91.7
MS.gene073184.t1 MTR_8g012745 31.163 215 128 7 237 436 237 446 2.01e-19 90.9
MS.gene073184.t1 MTR_4g128720 27.088 443 268 21 7 425 14 425 2.46e-19 90.5
MS.gene073184.t1 MTR_7g470610 35.583 163 100 4 253 413 128 287 2.79e-19 88.2
MS.gene073184.t1 MTR_7g070583 35.583 163 100 4 253 413 128 287 2.79e-19 88.2
MS.gene073184.t1 MTR_8g064880 25.986 431 250 14 7 394 8 412 2.85e-19 90.5
MS.gene073184.t1 MTR_5g029800 31.280 211 113 7 258 437 265 474 3.53e-19 90.1
MS.gene073184.t1 MTR_5g019580 30.594 219 127 6 239 433 262 479 4.36e-19 90.1
MS.gene073184.t1 MTR_5g019580 30.890 191 116 4 258 433 266 455 4.42e-19 90.1
MS.gene073184.t1 MTR_8g044140 24.694 409 250 11 46 416 19 407 5.75e-19 89.4
MS.gene073184.t1 MTR_3g479520 24.062 453 295 14 8 427 15 451 8.25e-19 89.4
MS.gene073184.t1 MTR_7g080950 32.620 187 115 6 253 439 253 428 1.40e-18 88.2
MS.gene073184.t1 MTR_8g064870 25.874 429 263 14 7 401 10 417 1.59e-18 88.2
MS.gene073184.t1 MTR_1g029540 24.777 448 286 16 13 437 19 438 1.69e-18 88.2
MS.gene073184.t1 MTR_5g090610 28.302 265 164 6 199 439 183 445 1.75e-18 88.2
MS.gene073184.t1 MTR_2g046750 32.766 235 141 9 236 459 239 467 1.84e-18 87.8
MS.gene073184.t1 MTR_5g040030 23.718 468 300 16 6 433 12 462 2.07e-18 88.2
MS.gene073184.t1 MTR_4g008630 28.631 241 157 6 209 437 204 441 2.34e-18 87.8
MS.gene073184.t1 MTR_3g069710 26.819 481 281 20 9 457 13 454 2.40e-18 87.4
MS.gene073184.t1 MTR_1g107365 31.443 194 109 5 219 399 253 435 4.23e-18 87.0
MS.gene073184.t1 MTR_5g075440 24.324 370 241 13 90 440 88 437 6.01e-18 86.3
MS.gene073184.t1 MTR_5g067170 30.978 184 110 5 258 425 267 449 7.54e-18 86.3
MS.gene073184.t1 MTR_8g083290 24.842 475 274 18 8 436 4 441 8.29e-18 85.9
MS.gene073184.t1 MTR_5g090630 23.491 464 303 17 8 438 5 449 9.32e-18 85.9
MS.gene073184.t1 MTR_5g098960 23.679 473 304 18 9 456 8 448 1.03e-17 85.5
MS.gene073184.t1 MTR_2g035040 30.337 178 109 4 258 421 174 350 1.14e-17 85.1
MS.gene073184.t1 MTR_2g035020 30.899 178 108 4 258 421 269 445 1.16e-17 85.9
MS.gene073184.t1 MTR_8g090095 27.969 261 161 8 209 445 218 475 1.24e-17 85.5
MS.gene073184.t1 MTR_3g479490 22.695 423 281 11 7 394 5 416 2.02e-17 84.7
MS.gene073184.t1 MTR_2g040530 30.526 190 120 4 259 438 261 448 2.04e-17 84.7
MS.gene073184.t1 MTR_6g035295 23.736 455 294 16 6 422 10 449 2.55e-17 84.7
MS.gene073184.t1 MTR_0288s0020 22.395 451 303 13 8 429 10 442 4.15e-17 84.0
MS.gene073184.t1 MTR_4g128690 26.667 435 276 17 1 419 8 415 6.57e-17 83.2
MS.gene073184.t1 MTR_3g084520 23.896 498 296 19 8 451 6 474 1.01e-16 82.8
MS.gene073184.t1 MTR_6g013440 28.346 254 152 10 197 434 217 456 1.09e-16 82.8
MS.gene073184.t1 MTR_1g107375 24.146 439 251 15 1 399 1 397 1.70e-16 82.0
MS.gene073184.t1 MTR_1g107285 30.366 191 111 5 219 397 222 402 2.00e-16 81.6
MS.gene073184.t1 MTR_1g107380 23.661 448 283 19 7 419 12 435 2.13e-16 81.6
MS.gene073184.t1 MTR_3g084540 23.478 460 287 16 18 436 16 451 2.51e-16 81.6
MS.gene073184.t1 MTR_1g040310 22.889 450 298 13 1 416 8 442 2.56e-16 81.6
MS.gene073184.t1 MTR_5g090700 23.173 479 295 16 9 438 6 460 2.85e-16 81.3
MS.gene073184.t1 MTR_5g090580 25.784 287 181 7 199 458 197 478 3.19e-16 81.3
MS.gene073184.t1 MTR_6g014170 30.978 184 113 6 253 434 266 437 9.68e-16 79.7
MS.gene073184.t1 MTR_7g011470 30.601 183 116 5 253 429 266 443 1.04e-15 79.7
MS.gene073184.t1 MTR_6g013900 31.073 177 108 6 253 427 283 447 1.04e-15 79.7
MS.gene073184.t1 MTR_7g011470 30.601 183 116 5 253 429 270 447 1.14e-15 79.3
MS.gene073184.t1 MTR_3g031400 23.060 451 284 17 8 436 18 427 1.35e-15 79.3
MS.gene073184.t1 MTR_6g011340 31.579 209 116 9 210 398 229 430 1.58e-15 79.0
MS.gene073184.t1 MTR_6g014020 30.899 178 109 6 253 426 284 451 1.72e-15 79.0
MS.gene073184.t1 MTR_6g014200 30.435 184 114 6 253 434 281 452 1.82e-15 79.0
MS.gene073184.t1 MTR_0891s0010 30.000 170 108 4 259 427 99 258 1.82e-15 77.0
MS.gene073184.t1 MTR_7g080900 24.889 450 279 17 6 429 10 426 1.94e-15 78.6
MS.gene073184.t1 MTR_5g004940 29.167 192 122 5 253 435 193 379 3.13e-15 77.8
MS.gene073184.t1 MTR_6g014190 28.962 183 119 5 253 429 91 268 3.90e-15 76.3
MS.gene073184.t1 MTR_5g016480 34.559 136 84 4 259 392 275 407 3.94e-15 77.8
MS.gene073184.t1 MTR_0036s0220 29.412 187 121 6 253 439 282 457 6.05e-15 77.4
MS.gene073184.t1 MTR_3g479610 27.155 232 146 6 210 427 59 281 6.08e-15 75.9
MS.gene073184.t1 MTR_6g013920 28.502 207 126 6 253 442 283 484 6.56e-15 77.0
MS.gene073184.t1 MTR_8g056740 27.149 221 147 5 220 430 121 337 9.51e-15 76.3
MS.gene073184.t1 MTR_3g031450 21.896 443 283 14 8 427 18 420 1.17e-14 76.3
MS.gene073184.t1 MTR_7g039550 29.464 224 133 5 220 421 5 225 1.37e-14 74.3
MS.gene073184.t1 MTR_5g090620 27.138 269 162 9 199 438 196 459 1.47e-14 75.9
MS.gene073184.t1 MTR_8g007585 29.891 184 115 6 253 434 196 367 1.57e-14 75.5
MS.gene073184.t1 MTR_5g464810 23.932 468 298 18 8 439 12 457 1.59e-14 75.9
MS.gene073184.t1 MTR_5g064240 23.932 468 298 18 8 439 12 457 1.59e-14 75.9
MS.gene073184.t1 MTR_3g084530 29.319 191 122 5 253 436 266 450 1.88e-14 75.9
MS.gene073184.t1 MTR_2g008210 30.000 170 110 5 259 427 284 445 1.94e-14 75.5
MS.gene073184.t1 MTR_1g107360 28.358 201 124 5 219 408 222 413 2.07e-14 75.5
MS.gene073184.t1 MTR_6g013450 28.415 183 120 5 253 429 285 462 2.44e-14 75.5
MS.gene073184.t1 MTR_6g014270 23.256 430 278 15 5 394 4 421 2.46e-14 75.5
MS.gene073184.t1 MTR_3g008010 23.348 454 296 18 8 425 10 447 3.21e-14 75.1
MS.gene073184.t1 MTR_5g058320 31.176 170 105 5 253 420 269 428 3.29e-14 75.1
MS.gene073184.t1 MTR_5g072820 23.881 469 298 16 8 448 10 447 5.11e-14 74.3
MS.gene073184.t1 MTR_6g014220 28.804 184 117 6 253 434 282 453 5.50e-14 74.3
MS.gene073184.t1 MTR_6g014150 29.586 169 107 5 253 419 281 439 8.82e-14 73.6
MS.gene073184.t1 MTR_6g078320 24.843 479 276 17 8 428 11 463 8.89e-14 73.6
MS.gene073184.t1 MTR_6g014240 29.714 175 111 5 223 395 226 390 1.43e-13 72.8
MS.gene073184.t1 MTR_6g014187 29.348 184 116 6 253 434 284 455 1.57e-13 72.8
MS.gene073184.t1 MTR_6g014250 27.419 186 121 6 253 436 282 455 1.92e-13 72.4
MS.gene073184.t1 MTR_6g014290 22.565 421 282 14 8 394 10 420 2.10e-13 72.4
MS.gene073184.t1 MTR_6g014050 28.415 183 120 5 253 429 285 462 6.85e-13 70.9
MS.gene073184.t1 MTR_0536s0030 33.094 139 79 4 309 434 194 331 1.07e-12 69.7
MS.gene073184.t1 MTR_8g009840 28.652 178 105 4 262 419 315 490 2.00e-12 69.7
MS.gene073184.t1 MTR_5g072830 24.779 226 148 5 219 434 211 424 2.23e-12 69.3
MS.gene073184.t1 MTR_5g072850 25.820 244 146 7 215 448 162 380 6.70e-12 67.4
MS.gene073184.t1 MTR_2086s0010 28.667 150 96 4 279 427 1 140 8.13e-12 64.3
MS.gene073184.t1 MTR_1996s0010 28.667 150 96 4 279 427 1 140 8.13e-12 64.3
MS.gene073184.t1 MTR_6g013960 30.556 144 93 4 253 394 284 422 1.72e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene073184.t1 AT5G54010 48.026 456 226 5 5 459 3 448 4.10e-155 448
MS.gene073184.t1 AT5G53990 47.598 458 215 6 6 458 4 441 1.43e-150 436
MS.gene073184.t1 AT4G27570 48.352 455 217 6 8 458 7 447 3.02e-150 435
MS.gene073184.t1 AT2G22930 48.373 461 211 7 1 456 1 439 3.20e-147 427
MS.gene073184.t1 AT5G54060 48.596 463 225 7 5 459 10 467 4.68e-147 428
MS.gene073184.t1 AT1G64910 47.033 455 222 6 6 458 4 441 1.14e-146 426
MS.gene073184.t1 AT4G27560 47.461 453 224 5 8 458 7 447 1.71e-146 426
MS.gene073184.t1 AT4G09500 46.638 461 219 8 1 456 1 439 1.40e-142 416
MS.gene073184.t1 AT1G64920 46.827 457 222 6 7 458 5 445 2.33e-142 415
MS.gene073184.t1 AT3G29630 44.714 454 233 4 5 455 3 441 3.04e-139 407
MS.gene073184.t1 AT1G50580 44.273 454 233 5 5 455 3 439 1.58e-135 398
MS.gene073184.t1 AT3G29630 43.902 451 215 5 5 455 3 415 2.96e-131 386
MS.gene073184.t1 AT4G09500 44.783 460 204 9 1 456 1 414 9.67e-130 382
MS.gene073184.t1 AT5G49690 33.766 462 276 10 7 459 9 449 2.94e-71 233
MS.gene073184.t1 AT2G22590 33.909 463 285 14 5 454 12 466 1.10e-69 229
MS.gene073184.t1 AT5G65550 31.770 469 294 16 2 455 3 460 2.61e-64 215
MS.gene073184.t1 AT2G22930 44.130 247 111 5 1 240 1 227 1.46e-60 199
MS.gene073184.t1 AT2G22930 46.429 84 44 1 373 456 205 287 3.65e-16 79.3
MS.gene073184.t1 AT5G03490 27.765 443 282 12 8 435 19 438 7.32e-39 147
MS.gene073184.t1 AT5G12890 27.215 474 296 16 4 443 6 464 3.96e-37 142
MS.gene073184.t1 AT1G73880 28.537 417 263 14 4 399 10 412 1.30e-34 135
MS.gene073184.t1 AT2G36770 29.565 460 280 17 3 427 11 461 3.37e-34 134
MS.gene073184.t1 AT1G51210 26.742 445 275 13 8 433 20 432 6.31e-34 132
MS.gene073184.t1 AT1G05680 28.200 461 263 19 8 436 6 430 8.82e-33 129
MS.gene073184.t1 AT2G15490 28.112 466 272 17 7 428 6 452 1.49e-32 129
MS.gene073184.t1 AT2G15490 27.862 463 274 16 7 428 6 449 1.80e-32 129
MS.gene073184.t1 AT1G05675 27.571 457 271 17 8 436 6 430 5.03e-32 127
MS.gene073184.t1 AT4G34138 27.699 491 294 15 5 456 8 476 6.22e-32 127
MS.gene073184.t1 AT2G36750 29.122 467 286 19 3 436 7 461 7.23e-32 127
MS.gene073184.t1 AT2G36780 29.847 459 276 19 6 427 12 461 1.09e-31 127
MS.gene073184.t1 AT2G15480 27.696 473 277 19 7 434 9 461 1.25e-30 124
MS.gene073184.t1 AT2G31790 27.352 457 274 16 8 436 8 434 2.25e-30 122
MS.gene073184.t1 AT2G36760 29.122 467 287 20 3 436 11 466 2.69e-30 123
MS.gene073184.t1 AT2G16890 27.455 448 280 19 8 429 9 437 6.43e-30 122
MS.gene073184.t1 AT4G34131 26.931 479 279 19 2 436 4 455 8.28e-30 121
MS.gene073184.t1 AT2G15480 27.549 461 274 17 7 426 9 450 9.95e-30 121
MS.gene073184.t1 AT4G36770 26.338 467 277 17 7 435 3 440 1.53e-28 117
MS.gene073184.t1 AT4G34135 27.130 446 275 15 7 416 10 441 4.86e-28 116
MS.gene073184.t1 AT5G14860 26.797 459 284 19 5 429 5 445 2.20e-27 114
MS.gene073184.t1 AT2G16890 27.146 431 271 18 8 412 9 422 3.06e-27 113
MS.gene073184.t1 AT2G36800 27.155 464 293 18 5 431 9 464 9.60e-27 112
MS.gene073184.t1 AT3G53150 26.752 471 297 17 7 436 21 484 1.31e-26 112
MS.gene073184.t1 AT1G10400 26.164 451 281 17 7 429 6 432 2.00e-26 111
MS.gene073184.t1 AT2G18570 29.688 256 163 4 195 434 188 442 2.06e-26 111
MS.gene073184.t1 AT3G53160 26.439 469 291 21 7 436 7 460 1.72e-25 109
MS.gene073184.t1 AT2G18560 29.752 242 155 4 207 434 112 352 1.75e-25 107
MS.gene073184.t1 AT1G01420 25.620 484 288 19 8 453 8 457 1.93e-25 108
MS.gene073184.t1 AT1G01420 25.510 490 281 19 8 453 11 460 2.01e-25 108
MS.gene073184.t1 AT3G50740 26.407 462 285 17 8 434 7 448 2.11e-25 108
MS.gene073184.t1 AT2G31750 35.429 175 105 4 259 433 263 429 4.61e-24 104
MS.gene073184.t1 AT2G31750 35.429 175 105 4 259 433 263 429 5.52e-24 104
MS.gene073184.t1 AT2G30140 23.983 467 268 16 1 427 1 420 8.92e-24 103
MS.gene073184.t1 AT2G30140 24.249 466 267 17 1 427 1 419 1.46e-23 103
MS.gene073184.t1 AT2G30150 22.153 483 305 16 8 458 13 456 1.59e-23 103
MS.gene073184.t1 AT5G38040 26.059 472 276 21 16 454 18 449 1.66e-22 100
MS.gene073184.t1 AT2G30150 22.176 478 301 16 13 458 2 440 1.76e-22 99.8
MS.gene073184.t1 AT2G43820 25.431 464 269 18 8 438 7 426 2.00e-22 99.8
MS.gene073184.t1 AT2G43840 33.516 182 111 4 257 438 255 426 1.65e-21 97.1
MS.gene073184.t1 AT2G43840 33.516 182 111 4 257 438 255 426 1.73e-21 97.1
MS.gene073184.t1 AT1G06000 24.537 432 249 13 8 415 10 388 1.80e-21 97.1
MS.gene073184.t1 AT5G59580 25.966 466 301 19 8 455 9 448 1.90e-21 97.1
MS.gene073184.t1 AT4G15490 24.070 457 309 17 1 434 1 442 2.01e-21 97.1
MS.gene073184.t1 AT5G59590 27.027 444 279 17 8 434 10 425 2.06e-21 96.7
MS.gene073184.t1 AT5G26310 23.581 458 298 14 8 435 7 442 1.01e-20 95.1
MS.gene073184.t1 AT2G36970 21.681 452 320 11 8 437 10 449 2.95e-20 93.6
MS.gene073184.t1 AT1G01390 25.104 482 284 20 8 444 8 457 3.63e-20 93.2
MS.gene073184.t1 AT2G36790 27.253 466 287 20 2 427 7 460 3.68e-20 93.2
MS.gene073184.t1 AT1G01390 25.104 482 284 20 8 444 25 474 4.03e-20 93.2
MS.gene073184.t1 AT2G28080 23.028 469 320 18 12 454 22 475 4.06e-20 93.2
MS.gene073184.t1 AT2G29730 31.646 237 145 7 200 425 202 432 4.48e-20 92.8
MS.gene073184.t1 AT4G14090 24.138 464 270 20 12 439 19 436 8.54e-20 92.0
MS.gene073184.t1 AT4G01070 22.785 474 295 17 1 434 1 443 1.29e-19 91.7
MS.gene073184.t1 AT4G15480 24.672 458 300 16 4 434 15 454 1.30e-19 91.7
MS.gene073184.t1 AT1G07250 27.815 302 188 10 166 456 192 474 1.02e-18 89.0
MS.gene073184.t1 AT4G15280 29.749 279 165 7 207 456 231 507 1.24e-18 89.0
MS.gene073184.t1 AT5G05880 25.660 265 166 9 196 437 189 445 1.34e-18 88.2
MS.gene073184.t1 AT4G15280 29.749 279 165 7 207 456 199 475 1.98e-18 88.2
MS.gene073184.t1 AT5G66690 28.099 242 151 6 236 459 233 469 5.84e-18 86.7
MS.gene073184.t1 AT3G16520 30.457 197 118 5 258 437 262 456 6.47e-18 86.3
MS.gene073184.t1 AT1G24100 22.151 465 291 17 8 438 11 438 8.65e-18 85.9
MS.gene073184.t1 AT1G07260 27.425 299 190 10 166 454 190 471 1.07e-17 85.9
MS.gene073184.t1 AT5G05890 26.848 257 167 9 199 437 196 449 1.13e-17 85.5
MS.gene073184.t1 AT1G22360 24.893 466 292 16 8 436 10 454 1.15e-17 85.9
MS.gene073184.t1 AT3G16520 31.515 165 107 3 258 418 262 424 1.38e-17 85.1
MS.gene073184.t1 AT4G15550 26.237 465 293 18 2 436 7 451 1.62e-17 85.1
MS.gene073184.t1 AT3G16520 31.515 165 107 3 258 418 262 424 1.76e-17 85.1
MS.gene073184.t1 AT1G05560 24.622 463 292 20 1 438 1 431 2.28e-17 84.7
MS.gene073184.t1 AT3G46670 23.230 452 288 18 2 428 3 420 2.38e-17 84.7
MS.gene073184.t1 AT1G05560 24.622 463 292 20 1 438 51 481 4.71e-17 84.0
MS.gene073184.t1 AT3G11340 27.586 232 151 7 203 427 192 413 4.95e-17 83.6
MS.gene073184.t1 AT4G15260 29.648 199 119 5 259 439 144 339 5.91e-17 82.4
MS.gene073184.t1 AT3G21560 24.681 470 288 18 3 434 7 448 6.14e-17 83.6
MS.gene073184.t1 AT5G05860 26.609 233 154 7 210 435 202 424 7.08e-17 83.2
MS.gene073184.t1 AT1G05530 25.797 345 198 12 120 436 118 432 1.74e-16 82.0
MS.gene073184.t1 AT1G78270 24.249 466 295 17 8 436 13 457 3.75e-16 81.3
MS.gene073184.t1 AT4G15500 23.348 454 312 15 1 434 1 438 4.74e-16 80.9
MS.gene073184.t1 AT3G21760 29.126 206 125 5 253 439 262 465 5.07e-16 80.5
MS.gene073184.t1 AT5G38010 24.473 474 282 19 8 449 10 439 5.37e-16 80.5
MS.gene073184.t1 AT2G29710 31.280 211 124 7 228 425 230 432 7.97e-16 80.1
MS.gene073184.t1 AT3G21790 27.907 215 136 4 259 456 268 480 8.19e-16 80.1
MS.gene073184.t1 AT3G21800 30.000 200 118 5 253 432 256 453 1.71e-15 79.0
MS.gene073184.t1 AT3G02100 23.409 487 294 19 8 458 13 456 1.88e-15 79.0
MS.gene073184.t1 AT3G21750 29.258 229 130 6 236 439 232 453 2.00e-15 79.0
MS.gene073184.t1 AT2G23250 27.670 206 132 4 252 448 237 434 2.98e-15 78.2
MS.gene073184.t1 AT3G22250 32.402 179 101 9 259 432 276 439 3.34e-15 78.2
MS.gene073184.t1 AT1G22360 24.764 424 268 14 8 394 10 419 6.90e-15 77.0
MS.gene073184.t1 AT5G17050 30.387 181 109 7 258 436 269 434 9.67e-15 76.6
MS.gene073184.t1 AT1G22380 31.319 182 107 6 259 436 290 457 5.94e-14 74.3
MS.gene073184.t1 AT5G05900 25.417 240 158 8 210 436 209 440 6.35e-14 73.9
MS.gene073184.t1 AT3G21780 28.037 214 136 5 259 456 259 470 9.30e-14 73.6
MS.gene073184.t1 AT1G30530 30.769 182 109 6 258 437 263 429 1.57e-13 72.8
MS.gene073184.t1 AT1G22400 30.769 169 107 5 259 427 291 449 1.60e-13 72.8
MS.gene073184.t1 AT2G23260 27.174 184 126 3 253 436 256 431 2.54e-13 72.0
MS.gene073184.t1 AT5G17030 28.897 263 145 13 196 436 191 433 2.61e-13 72.0
MS.gene073184.t1 AT3G55710 31.429 140 87 4 257 389 261 398 9.44e-13 70.5
MS.gene073184.t1 AT2G26480 24.046 262 164 11 197 444 186 426 6.46e-12 67.8
MS.gene073184.t1 AT3G46720 28.444 225 135 9 230 449 223 426 1.19e-11 67.0
MS.gene073184.t1 AT1G22340 22.293 471 299 16 8 436 13 458 1.27e-11 67.0
MS.gene073184.t1 AT5G17040 29.282 181 111 7 258 436 252 417 3.11e-11 65.5

Find 87 sgRNAs with CRISPR-Local

Find 123 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATACAACAACAATTGATTT+TGG 0.147257 2.3:+14240700 MS.gene073184:CDS
TATTATTAATGCTAAGATTA+TGG 0.158090 2.3:+14240832 MS.gene073184:CDS
TCAGATGTTTCTTTCTCTTT+AGG 0.182567 2.3:+14239939 MS.gene073184:CDS
GGTAAGCCGGTTCTTCTTTC+GGG 0.198064 2.3:+14240401 MS.gene073184:CDS
AAATGGAGTTCTTGGCTTAA+TGG 0.206487 2.3:+14240464 MS.gene073184:CDS
TAAAGATTAAAGGATGAAAT+AGG 0.210953 2.3:-14240212 None:intergenic
TTCATGAGAATAAAGATTAA+AGG 0.229126 2.3:-14240222 None:intergenic
ACCCTTTCTTCAAACCCTTC+TGG 0.251866 2.3:-14240647 None:intergenic
CCTCTTATTAAACCAAGATT+TGG 0.256317 2.3:+14241006 MS.gene073184:CDS
TGGTAAGCCGGTTCTTCTTT+CGG 0.261558 2.3:+14240400 MS.gene073184:CDS
GATTACTTAGAACAAGAATT+TGG 0.263030 2.3:+14240380 MS.gene073184:CDS
AAGTGATTAAATTTGGATAA+AGG 0.291034 2.3:-14239860 None:intergenic
GAATCAAATCTTTGCAATAC+TGG 0.295673 2.3:+14240087 MS.gene073184:CDS
GATGAAATAGGGTACCCTTT+TGG 0.306371 2.3:-14240200 None:intergenic
CACGTTCATGGTCTTCCATT+TGG 0.309969 2.3:+14239903 MS.gene073184:CDS
GAAGAAAGGGTTAAGGAAAA+AGG 0.313996 2.3:+14240659 MS.gene073184:CDS
CCAAATCTTGGTTTAATAAG+AGG 0.325001 2.3:-14241006 None:intergenic
CTCAATGTTCCTCACGTTCA+TGG 0.331331 2.3:+14239891 MS.gene073184:CDS
ATTATTAATGCTAAGATTAT+GGG 0.332404 2.3:+14240833 MS.gene073184:CDS
TTGGACTCATTCTATGTTGA+TGG 0.332713 2.3:+14241025 MS.gene073184:CDS
CAGTTTCATGAATTGTTGTT+AGG 0.337899 2.3:+14240548 MS.gene073184:CDS
GTACTTTCACACATCCTTGA+TGG 0.354575 2.3:-14240146 None:intergenic
TTGTTAGGACTTGAGTTAAC+AGG 0.363065 2.3:+14240563 MS.gene073184:CDS
ATGAGATTGGCAGAGAAGTT+AGG 0.371096 2.3:+14240960 MS.gene073184:CDS
TTGTTAGAGAGATGAAGATA+TGG 0.377944 2.3:-14239765 None:intergenic
TGTTCTAAGTAATCAACATA+AGG 0.403654 2.3:-14240371 None:intergenic
TCCAGAAGGGTTTGAAGAAA+GGG 0.409233 2.3:+14240646 MS.gene073184:CDS
CTCTAACAAATTAGCCAAAA+GGG 0.410982 2.3:+14239779 MS.gene073184:CDS
AGAGTATATGAAATTGTTGC+TGG 0.413566 2.3:-14240119 None:intergenic
TAATGCTAAGATTATGGGTA+TGG 0.416146 2.3:+14240838 MS.gene073184:CDS
TCTCTAACAAATTAGCCAAA+AGG 0.421960 2.3:+14239778 MS.gene073184:CDS
TTAGGTGGTTCAGGTAAAAC+AGG 0.424268 2.3:-14240425 None:intergenic
TTCCAGAAGGGTTTGAAGAA+AGG 0.426208 2.3:+14240645 MS.gene073184:CDS
GTGTTGATTCCACATTTAGA+TGG 0.433694 2.3:+14240803 MS.gene073184:CDS
CATAGAATGAGTCCAAATCT+TGG 0.444570 2.3:-14241018 None:intergenic
CTATTCTTAAACCTCCAGTT+GGG 0.449572 2.3:+14240600 MS.gene073184:CDS
AAAGATTAAAGGATGAAATA+GGG 0.459912 2.3:-14240211 None:intergenic
ATGTTTCCATGGTTTGCAAT+GGG 0.460769 2.3:+14239732 MS.gene073184:CDS
GTGAAGAAGGGTGAAGAAGA+TGG 0.465141 2.3:+14240881 MS.gene073184:CDS
TGAGCTTAAGTGATGCAATT+GGG 0.474508 2.3:+14240321 MS.gene073184:CDS
TTGAGCTTAAGTGATGCAAT+TGG 0.478411 2.3:+14240320 MS.gene073184:CDS
GGGGCCGGTTCGTTGACCGA+GGG 0.483173 2.3:+14240758 MS.gene073184:CDS
CAGCCCCTCGGTCAACGAAC+CGG 0.484046 2.3:-14240762 None:intergenic
AGAAGCTTCAAGAATTAGTC+AGG 0.484404 2.3:+14241056 MS.gene073184:CDS
TGCACATATCAATGTTTCCA+TGG 0.491689 2.3:+14239721 MS.gene073184:CDS
AGAACAAGAATTTGGTAAGC+CGG 0.492555 2.3:+14240388 MS.gene073184:CDS
TCGACCGTCTCAAACCCAAC+TGG 0.492578 2.3:-14240614 None:intergenic
GCTATTCTTAAACCTCCAGT+TGG 0.492862 2.3:+14240599 MS.gene073184:CDS
GTGATGCAATTGGGTTCAAA+GGG 0.494596 2.3:+14240330 MS.gene073184:CDS
ACAGGTCCCGAAAGAAGAAC+CGG 0.495275 2.3:-14240407 None:intergenic
ATGGGTATGGAATTGAAAGT+TGG 0.496476 2.3:+14240851 MS.gene073184:CDS
AGTGATGCAATTGGGTTCAA+AGG 0.500112 2.3:+14240329 MS.gene073184:CDS
TCATTAGTTTATTGTGCACT+TGG 0.508637 2.3:+14240500 MS.gene073184:CDS
AATGTTTCCATGGTTTGCAA+TGG 0.511213 2.3:+14239731 MS.gene073184:CDS
GTTCTAAGTAATCAACATAA+GGG 0.513918 2.3:-14240370 None:intergenic
AGGGTTTGAAGAAAGGGTTA+AGG 0.518253 2.3:+14240652 MS.gene073184:CDS
AAGGTATTGTTCATAGTGGA+TGG 0.520003 2.3:+14240678 MS.gene073184:CDS
GAAGTGGTTTCAGCACCAAA+TGG 0.527013 2.3:-14239918 None:intergenic
AGTTGGAGTTGAAGTGAAGA+AGG 0.527351 2.3:+14240868 MS.gene073184:CDS
ATGGATGATGAGAATGAGAT+TGG 0.535752 2.3:+14240947 MS.gene073184:CDS
ATTGTGCACTTGGAAGTGAA+TGG 0.539631 2.3:+14240510 MS.gene073184:CDS
CATATACTCTATCTCCATCA+AGG 0.539771 2.3:+14240132 MS.gene073184:CDS
TGGGGCCGGTTCGTTGACCG+AGG 0.542473 2.3:+14240757 MS.gene073184:CDS
TTTGTAACACATTGTGGGGC+CGG 0.544885 2.3:+14240743 MS.gene073184:CDS
ACAATTATTTGTCAGCCCCT+CGG 0.549099 2.3:-14240774 None:intergenic
TCCACTCATCATGACAGCTA+TGG 0.562897 2.3:+14239962 MS.gene073184:CDS
AGAGAAAGAAACATCTGAAG+TGG 0.564919 2.3:-14239934 None:intergenic
ACCTCCAGTTGGGTTTGAGA+CGG 0.565889 2.3:+14240610 MS.gene073184:CDS
AAAGGGTGTAGAGAAATTGA+AGG 0.571742 2.3:+14240347 MS.gene073184:CDS
TGATGCTGTGAAAATTGTGA+TGG 0.573976 2.3:+14240928 MS.gene073184:CDS
ATTGATATGTGCAATGAAGA+TGG 0.579018 2.3:-14239711 None:intergenic
CAATGAAGATGGTGGATCCA+TGG 0.583013 2.3:-14239700 None:intergenic
GTTGGGTTTGAGACGGTCGA+AGG 0.584075 2.3:+14240617 MS.gene073184:CDS
GTTGGAGTTGAAGTGAAGAA+GGG 0.584913 2.3:+14240869 MS.gene073184:CDS
AGAAGATGGATTCTTCACTA+AGG 0.600635 2.3:+14240895 MS.gene073184:CDS
TGAACGTGAGGAACATTGAG+AGG 0.611808 2.3:-14239888 None:intergenic
TCTAACAAATTAGCCAAAAG+GGG 0.613111 2.3:+14239780 MS.gene073184:CDS
GCTGACAAATAATTGTCAGA+TGG 0.619313 2.3:+14240781 MS.gene073184:CDS
ATATGATCACCATCTAAATG+TGG 0.620831 2.3:-14240812 None:intergenic
AAGTGTCCCATTGCAAACCA+TGG 0.628477 2.3:-14239738 None:intergenic
GGGCCGGTTCGTTGACCGAG+GGG 0.631592 2.3:+14240759 MS.gene073184:CDS
ACCGTCTCAAACCCAACTGG+AGG 0.638362 2.3:-14240611 None:intergenic
TCCATAGCTGTCATGATGAG+TGG 0.650873 2.3:-14239963 None:intergenic
GTGAGAAGAAGTTCAACTTG+AGG 0.659642 2.3:-14239996 None:intergenic
GAACGTGAGGAACATTGAGA+GGG 0.668627 2.3:-14239887 None:intergenic
AATGGAAGACCATGAACGTG+AGG 0.680390 2.3:-14239900 None:intergenic
GATATGTGCAATGAAGATGG+TGG 0.727549 2.3:-14239708 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATTAATGCTAAGATTAT+GGG + chr2.3:14240833-14240852 MS.gene073184:CDS 15.0%
!! TATTATTAATGCTAAGATTA+TGG + chr2.3:14240832-14240851 MS.gene073184:CDS 15.0%
!!! AAATCAAAGAAAACAATTTT+AGG - chr2.3:14240032-14240051 None:intergenic 15.0%
!! AAAGATTAAAGGATGAAATA+GGG - chr2.3:14240214-14240233 None:intergenic 20.0%
!! AAGTGATTAAATTTGGATAA+AGG - chr2.3:14239863-14239882 None:intergenic 20.0%
!! TAAAGATTAAAGGATGAAAT+AGG - chr2.3:14240215-14240234 None:intergenic 20.0%
!! TTCATGAGAATAAAGATTAA+AGG - chr2.3:14240225-14240244 None:intergenic 20.0%
!!! AAACTGTTTTAGATGAAAAA+TGG + chr2.3:14240447-14240466 MS.gene073184:CDS 20.0%
!!! AAATTTTAAATTTGGAAGTG+GGG + chr2.3:14240268-14240287 MS.gene073184:CDS 20.0%
!!! AACTTTGTTTGTGTTTTTTT+GGG - chr2.3:14239828-14239847 None:intergenic 20.0%
!!! AGAAATTTTAAATTTGGAAG+TGG + chr2.3:14240266-14240285 MS.gene073184:CDS 20.0%
!!! GAAATTTTAAATTTGGAAGT+GGG + chr2.3:14240267-14240286 MS.gene073184:CDS 20.0%
!!! TAACTTTGTTTGTGTTTTTT+TGG - chr2.3:14239829-14239848 None:intergenic 20.0%
!!! TTTTATGATAGGCTTTTTAA+TGG + chr2.3:14240296-14240315 MS.gene073184:CDS 20.0%
!!! TTTTCATCTAAAACAGTTTT+AGG - chr2.3:14240446-14240465 None:intergenic 20.0%
! GATTACTTAGAACAAGAATT+TGG + chr2.3:14240380-14240399 MS.gene073184:CDS 25.0%
! GGGTAAAAAGTGATTAAATT+TGG - chr2.3:14239870-14239889 None:intergenic 25.0%
!! GTTCTAAGTAATCAACATAA+GGG - chr2.3:14240373-14240392 None:intergenic 25.0%
!! TGTTCTAAGTAATCAACATA+AGG - chr2.3:14240374-14240393 None:intergenic 25.0%
!!! ACTTTGTTTGTGTTTTTTTG+GGG - chr2.3:14239827-14239846 None:intergenic 25.0%
!!! GATACAACAACAATTGATTT+TGG + chr2.3:14240700-14240719 MS.gene073184:CDS 25.0%
!!! TTTTCTTTGATTTTGCCTTT+TGG + chr2.3:14240039-14240058 MS.gene073184:CDS 25.0%
AGAGTATATGAAATTGTTGC+TGG - chr2.3:14240122-14240141 None:intergenic 30.0%
ATATGATCACCATCTAAATG+TGG - chr2.3:14240815-14240834 None:intergenic 30.0%
ATCTTATTAAACCCCCAAAA+GGG + chr2.3:14240186-14240205 MS.gene073184:CDS 30.0%
ATTGATATGTGCAATGAAGA+TGG - chr2.3:14239714-14239733 None:intergenic 30.0%
CCAAAAATTGCTCAAAGTTT+AGG + chr2.3:14240065-14240084 MS.gene073184:CDS 30.0%
CCAAATCTTGGTTTAATAAG+AGG - chr2.3:14241009-14241028 None:intergenic 30.0%
CCTCTTATTAAACCAAGATT+TGG + chr2.3:14241006-14241025 MS.gene073184:CDS 30.0%
CTCTAACAAATTAGCCAAAA+GGG + chr2.3:14239779-14239798 MS.gene073184:CDS 30.0%
GAATCAAATCTTTGCAATAC+TGG + chr2.3:14240087-14240106 MS.gene073184:CDS 30.0%
GGTTTAAGAATAGCCAAAAA+TGG - chr2.3:14240593-14240612 None:intergenic 30.0%
TAATGCTAAGATTATGGGTA+TGG + chr2.3:14240838-14240857 MS.gene073184:CDS 30.0%
TAGATGAAAAATGGAGTTCT+TGG + chr2.3:14240456-14240475 MS.gene073184:CDS 30.0%
TCAGATGTTTCTTTCTCTTT+AGG + chr2.3:14239939-14239958 MS.gene073184:CDS 30.0%
TCTAACAAATTAGCCAAAAG+GGG + chr2.3:14239780-14239799 MS.gene073184:CDS 30.0%
TCTCTAACAAATTAGCCAAA+AGG + chr2.3:14239778-14239797 MS.gene073184:CDS 30.0%
TTGTTAGAGAGATGAAGATA+TGG - chr2.3:14239768-14239787 None:intergenic 30.0%
! CAGTTTCATGAATTGTTGTT+AGG + chr2.3:14240548-14240567 MS.gene073184:CDS 30.0%
! CCTAAACTTTGAGCAATTTT+TGG - chr2.3:14240068-14240087 None:intergenic 30.0%
! GTTAACAGGTTATCCATTTT+TGG + chr2.3:14240577-14240596 MS.gene073184:CDS 30.0%
! TCATTAGTTTATTGTGCACT+TGG + chr2.3:14240500-14240519 MS.gene073184:CDS 30.0%
!! GAAAAAGGTATTGTTCATAG+TGG + chr2.3:14240674-14240693 MS.gene073184:CDS 30.0%
!! GTTGTTTTGTAACACATTGT+GGG + chr2.3:14240738-14240757 MS.gene073184:CDS 30.0%
!! TTGTTTTGTAACACATTGTG+GGG + chr2.3:14240739-14240758 MS.gene073184:CDS 30.0%
!!! AGCAATTTTTGGTATCCAAA+AGG - chr2.3:14240057-14240076 None:intergenic 30.0%
!!! TCATCTAAAACAGTTTTAGG+TGG - chr2.3:14240443-14240462 None:intergenic 30.0%
AAATGGAGTTCTTGGCTTAA+TGG + chr2.3:14240464-14240483 MS.gene073184:CDS 35.0%
AGAACAAGAATTTGGTAAGC+CGG + chr2.3:14240388-14240407 MS.gene073184:CDS 35.0%
AGAAGCTTCAAGAATTAGTC+AGG + chr2.3:14241056-14241075 MS.gene073184:CDS 35.0%
AGAGAAAGAAACATCTGAAG+TGG - chr2.3:14239937-14239956 None:intergenic 35.0%
ATGGATGATGAGAATGAGAT+TGG + chr2.3:14240947-14240966 MS.gene073184:CDS 35.0%
ATGGGTATGGAATTGAAAGT+TGG + chr2.3:14240851-14240870 MS.gene073184:CDS 35.0%
CATAGAATGAGTCCAAATCT+TGG - chr2.3:14241021-14241040 None:intergenic 35.0%
CATATACTCTATCTCCATCA+AGG + chr2.3:14240132-14240151 MS.gene073184:CDS 35.0%
CTATTCTTAAACCTCCAGTT+GGG + chr2.3:14240600-14240619 MS.gene073184:CDS 35.0%
GAAGAAAGGGTTAAGGAAAA+AGG + chr2.3:14240659-14240678 MS.gene073184:CDS 35.0%
GATCTTATTAAACCCCCAAA+AGG + chr2.3:14240185-14240204 MS.gene073184:CDS 35.0%
GCTGACAAATAATTGTCAGA+TGG + chr2.3:14240781-14240800 MS.gene073184:CDS 35.0%
TGAGCTTAAGTGATGCAATT+GGG + chr2.3:14240321-14240340 MS.gene073184:CDS 35.0%
TGATGCTGTGAAAATTGTGA+TGG + chr2.3:14240928-14240947 MS.gene073184:CDS 35.0%
TGCACATATCAATGTTTCCA+TGG + chr2.3:14239721-14239740 MS.gene073184:CDS 35.0%
TTGAGCTTAAGTGATGCAAT+TGG + chr2.3:14240320-14240339 MS.gene073184:CDS 35.0%
TTGGACTCATTCTATGTTGA+TGG + chr2.3:14241025-14241044 MS.gene073184:CDS 35.0%
TTGTTAGGACTTGAGTTAAC+AGG + chr2.3:14240563-14240582 MS.gene073184:CDS 35.0%
! AAAGGGTGTAGAGAAATTGA+AGG + chr2.3:14240347-14240366 MS.gene073184:CDS 35.0%
! AATGTTTCCATGGTTTGCAA+TGG + chr2.3:14239731-14239750 MS.gene073184:CDS 35.0%
! AGAAGATGGATTCTTCACTA+AGG + chr2.3:14240895-14240914 MS.gene073184:CDS 35.0%
! ATGTTTCCATGGTTTGCAAT+GGG + chr2.3:14239732-14239751 MS.gene073184:CDS 35.0%
!! AAGGTATTGTTCATAGTGGA+TGG + chr2.3:14240678-14240697 MS.gene073184:CDS 35.0%
!! ATGAAATAGGGTACCCTTTT+GGG - chr2.3:14240202-14240221 None:intergenic 35.0%
!! GGTTGTTTTGTAACACATTG+TGG + chr2.3:14240737-14240756 MS.gene073184:CDS 35.0%
!! GTGTTGATTCCACATTTAGA+TGG + chr2.3:14240803-14240822 MS.gene073184:CDS 35.0%
!! TTCTTGGCTTAATGGTTTTG+AGG + chr2.3:14240472-14240491 MS.gene073184:CDS 35.0%
!!! AAAACAGTTTTAGGTGGTTC+AGG - chr2.3:14240437-14240456 None:intergenic 35.0%
!!! GTGGGGTTCTTTTTTATGAT+AGG + chr2.3:14240285-14240304 MS.gene073184:CDS 35.0%
ACAATTATTTGTCAGCCCCT+CGG - chr2.3:14240777-14240796 None:intergenic 40.0%
AGGGTTTGAAGAAAGGGTTA+AGG + chr2.3:14240652-14240671 MS.gene073184:CDS 40.0%
AGTGATGCAATTGGGTTCAA+AGG + chr2.3:14240329-14240348 MS.gene073184:CDS 40.0%
AGTTGGAGTTGAAGTGAAGA+AGG + chr2.3:14240868-14240887 MS.gene073184:CDS 40.0%
ATGAGATTGGCAGAGAAGTT+AGG + chr2.3:14240960-14240979 MS.gene073184:CDS 40.0%
ATTGTGCACTTGGAAGTGAA+TGG + chr2.3:14240510-14240529 MS.gene073184:CDS 40.0%
GATATGTGCAATGAAGATGG+TGG - chr2.3:14239711-14239730 None:intergenic 40.0%
GCTATTCTTAAACCTCCAGT+TGG + chr2.3:14240599-14240618 MS.gene073184:CDS 40.0%
GTACTTTCACACATCCTTGA+TGG - chr2.3:14240149-14240168 None:intergenic 40.0%
GTGAGAAGAAGTTCAACTTG+AGG - chr2.3:14239999-14240018 None:intergenic 40.0%
GTGATGCAATTGGGTTCAAA+GGG + chr2.3:14240330-14240349 MS.gene073184:CDS 40.0%
GTTGGAGTTGAAGTGAAGAA+GGG + chr2.3:14240869-14240888 MS.gene073184:CDS 40.0%
TCCAGAAGGGTTTGAAGAAA+GGG + chr2.3:14240646-14240665 MS.gene073184:CDS 40.0%
TTAGGTGGTTCAGGTAAAAC+AGG - chr2.3:14240428-14240447 None:intergenic 40.0%
TTCCAGAAGGGTTTGAAGAA+AGG + chr2.3:14240645-14240664 MS.gene073184:CDS 40.0%
! AGAGATTTTGTGTCCCCTTT+TGG - chr2.3:14239796-14239815 None:intergenic 40.0%
!! GATGAAATAGGGTACCCTTT+TGG - chr2.3:14240203-14240222 None:intergenic 40.0%
!! TGAAATAGGGTACCCTTTTG+GGG - chr2.3:14240201-14240220 None:intergenic 40.0%
!!! ATTTTGGAACACTCGTCTGT+TGG + chr2.3:14240716-14240735 MS.gene073184:CDS 40.0%
!!! TGGCTTAATGGTTTTGAGGA+TGG + chr2.3:14240476-14240495 MS.gene073184:CDS 40.0%
AAGTGTCCCATTGCAAACCA+TGG - chr2.3:14239741-14239760 None:intergenic 45.0%
AATGGAAGACCATGAACGTG+AGG - chr2.3:14239903-14239922 None:intergenic 45.0%
ACCCTTTCTTCAAACCCTTC+TGG - chr2.3:14240650-14240669 None:intergenic 45.0%
CACGTTCATGGTCTTCCATT+TGG + chr2.3:14239903-14239922 MS.gene073184:CDS 45.0%
CTCAATGTTCCTCACGTTCA+TGG + chr2.3:14239891-14239910 MS.gene073184:CDS 45.0%
GAACGTGAGGAACATTGAGA+GGG - chr2.3:14239890-14239909 None:intergenic 45.0%
GAAGTGGTTTCAGCACCAAA+TGG - chr2.3:14239921-14239940 None:intergenic 45.0%
GTGAAGAAGGGTGAAGAAGA+TGG + chr2.3:14240881-14240900 MS.gene073184:CDS 45.0%
TCCACTCATCATGACAGCTA+TGG + chr2.3:14239962-14239981 MS.gene073184:CDS 45.0%
TCCATAGCTGTCATGATGAG+TGG - chr2.3:14239966-14239985 None:intergenic 45.0%
TGAACGTGAGGAACATTGAG+AGG - chr2.3:14239891-14239910 None:intergenic 45.0%
TTTGTAACACATTGTGGGGC+CGG + chr2.3:14240743-14240762 MS.gene073184:CDS 45.0%
! TGGTAAGCCGGTTCTTCTTT+CGG + chr2.3:14240400-14240419 MS.gene073184:CDS 45.0%
!! GAAATAGGGTACCCTTTTGG+GGG - chr2.3:14240200-14240219 None:intergenic 45.0%
!!! TCGAAGGTGCTTTTCCAGAA+GGG + chr2.3:14240633-14240652 MS.gene073184:CDS 45.0%
!!! TTAAAAAGAAATTTTAAATT+TGG + chr2.3:14240260-14240279 MS.gene073184:CDS 5.0%
ACAGGTCCCGAAAGAAGAAC+CGG - chr2.3:14240410-14240429 None:intergenic 50.0%
ACCTCCAGTTGGGTTTGAGA+CGG + chr2.3:14240610-14240629 MS.gene073184:CDS 50.0%
! GGTAAGCCGGTTCTTCTTTC+GGG + chr2.3:14240401-14240420 MS.gene073184:CDS 50.0%
!!! GTCGAAGGTGCTTTTCCAGA+AGG + chr2.3:14240632-14240651 MS.gene073184:CDS 50.0%
ACCGTCTCAAACCCAACTGG+AGG - chr2.3:14240614-14240633 None:intergenic 55.0%
TCGACCGTCTCAAACCCAAC+TGG - chr2.3:14240617-14240636 None:intergenic 55.0%
! GTTGGGTTTGAGACGGTCGA+AGG + chr2.3:14240617-14240636 MS.gene073184:CDS 55.0%
CAGCCCCTCGGTCAACGAAC+CGG - chr2.3:14240765-14240784 None:intergenic 65.0%
!! GGGCCGGTTCGTTGACCGAG+GGG + chr2.3:14240759-14240778 MS.gene073184:CDS 70.0%
!! GGGGCCGGTTCGTTGACCGA+GGG + chr2.3:14240758-14240777 MS.gene073184:CDS 70.0%
!! TGGGGCCGGTTCGTTGACCG+AGG + chr2.3:14240757-14240776 MS.gene073184:CDS 70.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 14239702 14241081 14239702 ID=MS.gene073184
chr2.3 mRNA 14239702 14241081 14239702 ID=MS.gene073184.t1;Parent=MS.gene073184
chr2.3 exon 14239702 14241081 14239702 ID=MS.gene073184.t1.exon1;Parent=MS.gene073184.t1
chr2.3 CDS 14239702 14241081 14239702 ID=cds.MS.gene073184.t1;Parent=MS.gene073184.t1
Gene Sequence

>MS.gene073184

ATGGATCCACCATCTTCATTGCACATATCAATGTTTCCATGGTTTGCAATGGGACACTTAACTCCATATCTTCATCTCTCTAACAAATTAGCCAAAAGGGGACACAAAATCTCTTTCTTCATCCCCAAAAAAACACAAACAAAGTTAGAACAATTCAACCTTTATCCAAATTTAATCACTTTTTACCCTCTCAATGTTCCTCACGTTCATGGTCTTCCATTTGGTGCTGAAACCACTTCAGATGTTTCTTTCTCTTTAGGTCCACTCATCATGACAGCTATGGATCAAACACAGCCTCAAGTTGAACTTCTTCTCACTCAACTAAATCCTAAAATTGTTTTCTTTGATTTTGCCTTTTGGATACCAAAAATTGCTCAAAGTTTAGGAATCAAATCTTTGCAATACTGGATTGTTAGTCCAGCAACAATTTCATATACTCTATCTCCATCAAGGATGTGTGAAAGTACAAACTTGACTGAATTTGATCTTATTAAACCCCCAAAAGGGTACCCTATTTCATCCTTTAATCTTTATTCTCATGAAGCAAAGTATCTTGCTTTAAAAAGAAATTTTAAATTTGGAAGTGGGGTTCTTTTTTATGATAGGCTTTTTAATGGTTTGAGCTTAAGTGATGCAATTGGGTTCAAAGGGTGTAGAGAAATTGAAGGCCCTTATGTTGATTACTTAGAACAAGAATTTGGTAAGCCGGTTCTTCTTTCGGGACCTGTTTTACCTGAACCACCTAAAACTGTTTTAGATGAAAAATGGAGTTCTTGGCTTAATGGTTTTGAGGATGGTTCATTAGTTTATTGTGCACTTGGAAGTGAATGGAAATTAACACAAGAACAGTTTCATGAATTGTTGTTAGGACTTGAGTTAACAGGTTATCCATTTTTGGCTATTCTTAAACCTCCAGTTGGGTTTGAGACGGTCGAAGGTGCTTTTCCAGAAGGGTTTGAAGAAAGGGTTAAGGAAAAAGGTATTGTTCATAGTGGATGGATACAACAACAATTGATTTTGGAACACTCGTCTGTTGGTTGTTTTGTAACACATTGTGGGGCCGGTTCGTTGACCGAGGGGCTGACAAATAATTGTCAGATGGTGTTGATTCCACATTTAGATGGTGATCATATTATTAATGCTAAGATTATGGGTATGGAATTGAAAGTTGGAGTTGAAGTGAAGAAGGGTGAAGAAGATGGATTCTTCACTAAGGAAAGTGTTTGTGATGCTGTGAAAATTGTGATGGATGATGAGAATGAGATTGGCAGAGAAGTTAGGAGTAATCATGATAAACTGAGAAACCTCTTATTAAACCAAGATTTGGACTCATTCTATGTTGATGGTTTCTGTGAGAAGCTTCAAGAATTAGTCAGGTGA

Protein sequence

>MS.gene073184.t1

MDPPSSLHISMFPWFAMGHLTPYLHLSNKLAKRGHKISFFIPKKTQTKLEQFNLYPNLITFYPLNVPHVHGLPFGAETTSDVSFSLGPLIMTAMDQTQPQVELLLTQLNPKIVFFDFAFWIPKIAQSLGIKSLQYWIVSPATISYTLSPSRMCESTNLTEFDLIKPPKGYPISSFNLYSHEAKYLALKRNFKFGSGVLFYDRLFNGLSLSDAIGFKGCREIEGPYVDYLEQEFGKPVLLSGPVLPEPPKTVLDEKWSSWLNGFEDGSLVYCALGSEWKLTQEQFHELLLGLELTGYPFLAILKPPVGFETVEGAFPEGFEERVKEKGIVHSGWIQQQLILEHSSVGCFVTHCGAGSLTEGLTNNCQMVLIPHLDGDHIINAKIMGMELKVGVEVKKGEEDGFFTKESVCDAVKIVMDDENEIGREVRSNHDKLRNLLLNQDLDSFYVDGFCEKLQELVR