AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene009784

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene009784.t1 MTR_5g072860 89.625 453 46 1 12 463 18 470 0.0 843
MS.gene009784.t1 MTR_5g075440 54.705 457 200 4 7 460 5 457 0.0 515
MS.gene009784.t1 MTR_3g031450 52.564 468 197 9 1 461 5 454 6.16e-166 476
MS.gene009784.t1 MTR_3g031400 53.004 466 193 9 2 461 7 452 1.66e-165 475
MS.gene009784.t1 MTR_5g072810 50.111 451 212 7 12 458 12 453 8.37e-153 442
MS.gene009784.t1 MTR_5g072840 47.912 455 215 9 12 459 10 449 1.96e-144 421
MS.gene009784.t1 MTR_5g072820 47.588 456 213 9 12 458 10 448 3.82e-143 417
MS.gene009784.t1 MTR_5g072830 46.711 456 217 9 12 458 10 448 3.56e-141 412
MS.gene009784.t1 MTR_5g072850 46.070 458 166 8 5 459 3 382 1.35e-133 391
MS.gene009784.t1 MTR_6g014040 31.417 487 280 17 12 459 10 481 2.59e-62 210
MS.gene009784.t1 MTR_6g014270 31.633 490 276 16 12 459 7 479 8.01e-60 203
MS.gene009784.t1 MTR_7g011470 32.636 478 271 16 12 459 10 466 1.12e-59 202
MS.gene009784.t1 MTR_3g008010 31.328 482 284 16 12 459 10 478 2.02e-59 202
MS.gene009784.t1 MTR_8g059425 30.705 482 287 16 12 459 10 478 2.90e-59 202
MS.gene009784.t1 MTR_6g014200 32.305 486 276 17 12 459 7 477 5.62e-59 201
MS.gene009784.t1 MTR_6g013440 31.148 488 279 16 12 459 11 481 7.13e-59 201
MS.gene009784.t1 MTR_3g079480 31.120 482 287 15 12 460 21 490 1.43e-58 200
MS.gene009784.t1 MTR_6g038220 30.193 467 282 12 12 458 11 453 1.79e-58 199
MS.gene009784.t1 MTR_6g011340 32.186 494 266 18 12 459 10 480 6.32e-58 198
MS.gene009784.t1 MTR_2g008210 30.063 479 292 15 12 459 11 477 6.85e-58 198
MS.gene009784.t1 MTR_3g479520 30.435 483 289 15 12 460 15 484 9.13e-58 198
MS.gene009784.t1 MTR_6g014020 31.211 487 280 17 12 459 10 480 1.43e-57 197
MS.gene009784.t1 MTR_0288s0020 29.918 488 266 15 12 459 10 461 1.70e-57 197
MS.gene009784.t1 MTR_6g014290 31.006 487 279 17 12 459 10 478 1.81e-57 197
MS.gene009784.t1 MTR_7g011470 32.285 477 270 17 12 459 10 462 2.26e-57 196
MS.gene009784.t1 MTR_6g013900 31.762 488 275 19 12 459 10 479 3.15e-57 196
MS.gene009784.t1 MTR_6g013920 32.033 487 275 18 12 459 10 479 6.96e-57 196
MS.gene009784.t1 MTR_6g013450 30.550 491 285 16 9 459 7 481 1.07e-56 195
MS.gene009784.t1 MTR_3g069710 28.788 462 292 10 13 459 13 452 1.29e-56 194
MS.gene009784.t1 MTR_6g038240 30.064 469 283 15 12 459 11 455 1.33e-56 194
MS.gene009784.t1 MTR_6g013960 29.303 488 288 16 12 459 10 480 1.99e-56 194
MS.gene009784.t1 MTR_6g014187 29.158 487 290 14 12 459 10 480 2.41e-56 194
MS.gene009784.t1 MTR_3g479490 30.146 481 291 15 12 459 6 474 2.61e-56 194
MS.gene009784.t1 MTR_6g014220 29.835 486 286 16 12 459 10 478 7.01e-56 193
MS.gene009784.t1 MTR_8g083290 29.474 475 292 13 13 459 5 464 8.37e-56 192
MS.gene009784.t1 MTR_8g088560 30.342 468 285 15 12 458 10 457 9.43e-56 192
MS.gene009784.t1 MTR_6g014250 29.691 485 288 17 12 459 10 478 9.59e-56 192
MS.gene009784.t1 MTR_5g035580 30.258 466 275 16 12 455 13 450 1.18e-55 192
MS.gene009784.t1 MTR_6g014310 29.713 488 286 14 12 459 11 481 1.52e-55 192
MS.gene009784.t1 MTR_6g038230 29.526 464 292 14 11 458 10 454 2.45e-55 191
MS.gene009784.t1 MTR_6g014050 31.762 488 276 18 12 459 11 481 4.91e-55 191
MS.gene009784.t1 MTR_6g014150 31.687 486 279 17 12 459 7 477 8.98e-55 190
MS.gene009784.t1 MTR_4g094220 30.661 499 278 18 1 455 1 475 1.48e-54 189
MS.gene009784.t1 MTR_7g080940 29.915 468 285 15 12 460 11 454 1.83e-54 189
MS.gene009784.t1 MTR_6g013990 30.992 484 283 18 12 459 10 478 3.72e-54 188
MS.gene009784.t1 MTR_6g014300 30.228 483 274 17 12 459 12 466 4.25e-54 188
MS.gene009784.t1 MTR_5g058320 30.579 484 278 18 9 459 7 465 4.82e-54 188
MS.gene009784.t1 MTR_8g083280 29.938 481 277 12 13 459 8 462 4.98e-54 188
MS.gene009784.t1 MTR_7g080950 28.511 470 289 15 12 460 6 449 5.54e-54 187
MS.gene009784.t1 MTR_6g038200 28.970 466 294 13 10 458 9 454 8.39e-54 187
MS.gene009784.t1 MTR_0036s0220 29.668 482 290 18 12 459 12 478 1.77e-53 186
MS.gene009784.t1 MTR_6g014170 30.165 484 271 17 12 459 10 462 2.24e-53 186
MS.gene009784.t1 MTR_6g038300 29.526 464 291 13 12 458 11 455 6.65e-53 184
MS.gene009784.t1 MTR_5g464810 29.607 483 291 18 11 459 11 478 8.41e-52 182
MS.gene009784.t1 MTR_5g064240 29.607 483 291 18 11 459 11 478 8.41e-52 182
MS.gene009784.t1 MTR_6g014240 29.498 478 270 15 12 459 7 447 1.64e-51 181
MS.gene009784.t1 MTR_5g464760 29.253 482 294 17 12 459 12 480 4.91e-51 180
MS.gene009784.t1 MTR_1g107380 27.664 488 292 15 9 459 10 473 1.01e-50 179
MS.gene009784.t1 MTR_7g080935 30.172 464 291 14 11 460 10 454 1.99e-50 178
MS.gene009784.t1 MTR_5g035560 28.936 470 292 15 12 463 11 456 8.21e-50 177
MS.gene009784.t1 MTR_7g102460 28.074 488 306 12 9 459 6 485 1.11e-49 177
MS.gene009784.t1 MTR_3g069690 27.312 465 301 8 11 459 7 450 1.36e-49 176
MS.gene009784.t1 MTR_7g102490 27.767 497 298 14 9 459 6 487 1.42e-49 177
MS.gene009784.t1 MTR_7g080900 28.118 473 311 13 1 460 1 457 1.73e-49 175
MS.gene009784.t1 MTR_3g084520 28.543 494 279 16 12 458 6 472 4.24e-49 175
MS.gene009784.t1 MTR_3g479470 29.400 483 293 16 12 460 13 481 1.02e-48 174
MS.gene009784.t1 MTR_5g016480 26.860 484 300 15 13 461 9 473 2.29e-48 173
MS.gene009784.t1 MTR_4g094920 27.079 469 313 11 9 459 23 480 6.66e-48 172
MS.gene009784.t1 MTR_4g064987 29.724 471 278 14 13 459 9 450 7.77e-48 171
MS.gene009784.t1 MTR_5g031840 28.450 471 303 14 10 458 3 461 1.20e-47 171
MS.gene009784.t1 MTR_1g107375 28.817 465 298 15 10 458 6 453 5.08e-47 169
MS.gene009784.t1 MTR_0184s0040 29.412 476 281 13 6 447 15 469 6.93e-47 169
MS.gene009784.t1 MTR_0078s0190 29.412 476 281 13 6 447 15 469 6.93e-47 169
MS.gene009784.t1 MTR_3g049970 27.926 487 285 15 12 458 9 469 9.65e-47 168
MS.gene009784.t1 MTR_3g084530 28.033 478 302 15 12 458 6 472 1.05e-46 168
MS.gene009784.t1 MTR_5g098930 26.854 499 281 14 12 460 5 469 1.31e-46 168
MS.gene009784.t1 MTR_8g043470 28.916 415 223 10 66 459 15 378 2.71e-46 165
MS.gene009784.t1 MTR_4g024020 27.767 497 299 16 9 459 6 488 5.07e-46 167
MS.gene009784.t1 MTR_8g064870 28.125 480 303 13 13 463 12 478 5.49e-46 166
MS.gene009784.t1 MTR_7g070610 29.350 477 290 16 12 451 13 479 6.56e-46 167
MS.gene009784.t1 MTR_4g485630 28.953 487 284 20 12 458 9 473 7.97e-46 166
MS.gene009784.t1 MTR_4g064987 29.512 471 273 15 13 459 9 444 1.42e-45 164
MS.gene009784.t1 MTR_8g077590 30.818 477 265 16 9 447 6 455 2.05e-45 164
MS.gene009784.t1 MTR_8g066610 28.252 492 279 17 12 455 9 474 3.26e-45 164
MS.gene009784.t1 MTR_1g107350 27.044 477 302 14 12 458 8 468 3.99e-45 164
MS.gene009784.t1 MTR_1g107360 27.629 485 281 13 12 458 9 461 5.14e-45 164
MS.gene009784.t1 MTR_1g062380 27.613 507 282 15 12 460 16 495 5.45e-45 164
MS.gene009784.t1 MTR_3g084540 27.708 480 302 16 12 458 6 473 5.53e-45 164
MS.gene009784.t1 MTR_8g009050 27.484 473 295 14 10 451 4 459 6.53e-45 163
MS.gene009784.t1 MTR_4g095008 26.737 475 301 16 12 459 11 465 1.79e-44 164
MS.gene009784.t1 MTR_7g117170 29.314 481 290 15 2 451 7 468 2.65e-44 162
MS.gene009784.t1 MTR_0078s0010 28.571 476 286 14 10 451 4 459 3.03e-44 161
MS.gene009784.t1 MTR_7g055710 27.579 475 300 13 12 451 11 476 3.99e-44 162
MS.gene009784.t1 MTR_8g009073 28.510 463 291 11 10 446 4 452 6.12e-44 160
MS.gene009784.t1 MTR_8g027885 28.361 476 275 15 13 451 19 465 1.02e-43 160
MS.gene009784.t1 MTR_7g013180 28.261 460 282 14 12 449 5 438 1.03e-43 159
MS.gene009784.t1 MTR_1g107365 27.696 473 290 14 12 458 45 491 1.33e-43 160
MS.gene009784.t1 MTR_7g117405 26.210 496 292 15 12 459 12 481 1.75e-43 159
MS.gene009784.t1 MTR_1g107315 27.140 479 301 14 11 458 7 468 2.46e-43 159
MS.gene009784.t1 MTR_7g013240 27.511 458 291 13 12 455 6 436 2.59e-43 158
MS.gene009784.t1 MTR_8g009055 28.025 471 295 13 10 451 4 459 3.47e-43 159
MS.gene009784.t1 MTR_8g009063 27.349 479 294 13 10 454 11 469 4.85e-43 158
MS.gene009784.t1 MTR_1g029540 28.450 471 278 18 17 458 19 459 4.97e-43 158
MS.gene009784.t1 MTR_3g479610 32.258 310 181 8 170 460 15 314 5.27e-43 154
MS.gene009784.t1 MTR_8g064880 30.595 487 288 15 12 463 9 480 5.30e-43 158
MS.gene009784.t1 MTR_8g027870 29.019 479 268 16 13 451 19 465 8.06e-43 158
MS.gene009784.t1 MTR_7g013200 26.813 455 299 11 12 455 5 436 1.49e-42 156
MS.gene009784.t1 MTR_5g031860 28.421 475 295 16 12 458 12 469 1.57e-42 157
MS.gene009784.t1 MTR_7g070800 27.651 481 289 14 12 451 6 468 1.61e-42 157
MS.gene009784.t1 MTR_1g019510 28.118 473 295 14 10 454 4 459 1.62e-42 157
MS.gene009784.t1 MTR_7g070940 27.158 475 301 12 12 455 9 469 1.81e-42 157
MS.gene009784.t1 MTR_1g107285 28.392 479 286 14 13 458 9 463 2.30e-42 156
MS.gene009784.t1 MTR_7g070660 26.749 486 300 14 12 458 11 479 2.67e-42 157
MS.gene009784.t1 MTR_5g031830 28.687 495 291 16 1 458 1 470 3.08e-42 156
MS.gene009784.t1 MTR_5g045970 26.772 508 284 14 12 460 16 494 4.66e-42 156
MS.gene009784.t1 MTR_4g008630 28.661 478 279 17 13 458 15 462 6.06e-42 155
MS.gene009784.t1 MTR_7g071040 26.360 478 303 12 12 451 17 483 6.98e-42 155
MS.gene009784.t1 MTR_7g013260 27.837 467 279 15 12 455 6 437 7.55e-42 154
MS.gene009784.t1 MTR_7g070860 28.355 462 296 12 12 451 7 455 8.14e-42 155
MS.gene009784.t1 MTR_8g008990 27.731 476 292 14 10 451 4 461 1.37e-41 154
MS.gene009784.t1 MTR_8g006730 27.677 495 285 16 11 462 5 469 1.78e-41 154
MS.gene009784.t1 MTR_2g040530 27.673 477 296 16 13 458 6 464 2.29e-41 154
MS.gene009784.t1 MTR_7g047030 28.998 469 285 15 10 447 4 455 2.66e-41 153
MS.gene009784.t1 MTR_7g047270 28.998 469 285 15 10 447 4 455 2.66e-41 153
MS.gene009784.t1 MTR_7g070780 27.926 487 297 16 12 458 11 483 3.92e-41 153
MS.gene009784.t1 MTR_8g465670 26.403 481 299 11 11 455 6 467 4.96e-41 153
MS.gene009784.t1 MTR_3g009510 27.347 490 283 15 11 451 4 469 1.52e-40 151
MS.gene009784.t1 MTR_7g102560 26.305 498 303 16 9 460 6 485 1.63e-40 152
MS.gene009784.t1 MTR_7g102550 25.873 487 305 14 12 455 9 482 3.00e-40 151
MS.gene009784.t1 MTR_5g070090 29.873 472 287 20 11 458 10 461 3.12e-40 150
MS.gene009784.t1 MTR_7g046490 34.091 308 151 10 176 451 169 456 3.36e-40 150
MS.gene009784.t1 MTR_1g032490 27.426 474 312 14 8 458 6 470 5.09e-40 150
MS.gene009784.t1 MTR_8g012635 28.629 496 271 18 10 454 4 467 6.80e-40 150
MS.gene009784.t1 MTR_6g005600 28.106 491 260 17 11 447 5 456 7.08e-40 149
MS.gene009784.t1 MTR_8g012650 28.743 501 275 18 11 459 5 475 7.45e-40 149
MS.gene009784.t1 MTR_8g008970 28.205 468 296 12 10 451 4 457 1.09e-39 152
MS.gene009784.t1 MTR_8g008970 31.641 256 158 6 204 451 535 781 2.43e-28 119
MS.gene009784.t1 MTR_5g045960 24.900 498 304 10 12 459 9 486 1.60e-39 149
MS.gene009784.t1 MTR_4g031800 26.749 486 296 15 13 460 10 473 1.63e-39 149
MS.gene009784.t1 MTR_6g014190 32.542 295 161 9 193 459 3 287 2.38e-39 144
MS.gene009784.t1 MTR_7g070910 26.834 477 302 12 12 451 11 477 3.03e-39 148
MS.gene009784.t1 MTR_8g006710 28.016 489 286 20 13 462 7 468 4.22e-39 147
MS.gene009784.t1 MTR_8g009067 27.273 473 302 12 10 455 4 461 4.42e-39 147
MS.gene009784.t1 MTR_7g013220 29.437 462 278 15 12 449 5 442 4.60e-39 147
MS.gene009784.t1 MTR_8g012745 27.743 483 289 14 10 454 4 464 5.15e-39 147
MS.gene009784.t1 MTR_4g485620 28.967 397 245 13 88 460 76 459 5.69e-39 147
MS.gene009784.t1 MTR_0184s0030 27.813 471 289 13 10 447 4 456 8.97e-39 146
MS.gene009784.t1 MTR_7g102520 26.220 492 305 15 12 459 12 489 3.41e-38 145
MS.gene009784.t1 MTR_8g009073 32.653 294 165 7 176 446 40 323 8.69e-38 141
MS.gene009784.t1 MTR_8g009067 31.579 304 173 8 176 455 51 343 9.27e-38 141
MS.gene009784.t1 MTR_0078s0060 28.125 480 273 17 10 446 4 454 9.96e-38 144
MS.gene009784.t1 MTR_4g117960 26.042 480 304 15 16 458 15 480 1.84e-37 143
MS.gene009784.t1 MTR_0891s0010 32.197 264 157 6 212 460 35 291 2.61e-37 138
MS.gene009784.t1 MTR_6g023665 26.931 479 292 14 11 454 12 467 3.41e-37 142
MS.gene009784.t1 MTR_8g074550 27.621 496 283 16 11 451 7 481 4.05e-37 142
MS.gene009784.t1 MTR_7g070810 26.186 485 302 13 12 458 9 475 1.19e-36 141
MS.gene009784.t1 MTR_0536s0020 25.979 485 290 16 16 458 22 479 2.89e-36 140
MS.gene009784.t1 MTR_0536s0010 27.066 484 280 18 16 458 25 476 3.93e-36 139
MS.gene009784.t1 MTR_7g102450 25.105 478 314 12 12 460 11 473 4.45e-36 139
MS.gene009784.t1 MTR_8g012730 37.838 222 107 6 251 446 80 296 5.47e-36 135
MS.gene009784.t1 MTR_6g033725 25.413 484 288 14 13 454 5 457 5.59e-36 139
MS.gene009784.t1 MTR_4g117950 25.615 488 287 15 16 460 10 464 6.23e-36 139
MS.gene009784.t1 MTR_4g108250 25.887 479 307 13 12 451 11 480 7.60e-36 139
MS.gene009784.t1 MTR_8g006220 25.306 490 302 11 11 455 5 475 1.02e-35 138
MS.gene009784.t1 MTR_6g488280 26.096 479 296 15 11 454 5 460 1.08e-35 138
MS.gene009784.t1 MTR_0428s0010 26.096 479 296 15 11 454 5 460 1.08e-35 138
MS.gene009784.t1 MTR_8g466240 27.061 473 292 15 9 455 5 450 2.42e-35 137
MS.gene009784.t1 MTR_7g070740 25.941 478 304 14 12 451 11 476 3.36e-35 137
MS.gene009784.t1 MTR_8g032950 25.311 482 310 13 13 458 13 480 3.47e-35 137
MS.gene009784.t1 MTR_7g070930 26.151 478 304 10 12 451 14 480 3.60e-35 137
MS.gene009784.t1 MTR_5g090580 24.850 499 300 13 11 460 4 476 4.82e-35 136
MS.gene009784.t1 MTR_8g007585 35.149 202 115 3 267 459 198 392 4.94e-35 135
MS.gene009784.t1 MTR_5g090670 26.104 498 297 16 11 460 4 478 4.95e-35 136
MS.gene009784.t1 MTR_2g046820 25.420 476 302 14 12 455 5 459 5.31e-35 136
MS.gene009784.t1 MTR_6g013680 28.436 422 216 16 66 459 12 375 6.73e-35 134
MS.gene009784.t1 MTR_5g090660 25.403 496 293 15 11 459 4 469 6.94e-35 137
MS.gene009784.t1 MTR_5g087620 25.444 507 299 17 12 460 10 495 7.90e-35 136
MS.gene009784.t1 MTR_0477s0010 28.249 354 192 8 126 459 6 317 8.30e-35 132
MS.gene009784.t1 MTR_2g046750 24.795 488 299 14 12 458 5 465 9.44e-35 135
MS.gene009784.t1 MTR_5g090620 25.352 497 301 16 11 460 4 477 1.45e-34 135
MS.gene009784.t1 MTR_5g016660 26.273 491 293 13 9 451 7 476 1.47e-34 135
MS.gene009784.t1 MTR_5g090600 26.151 478 299 14 11 460 4 455 1.98e-34 134
MS.gene009784.t1 MTR_6g033625 25.105 474 291 14 13 447 5 453 3.48e-34 134
MS.gene009784.t1 MTR_5g090700 23.984 492 315 12 11 460 4 478 3.64e-34 134
MS.gene009784.t1 MTR_6g014186 26.283 487 266 17 12 459 7 439 5.18e-34 133
MS.gene009784.t1 MTR_2g059240 25.605 496 298 18 4 459 5 469 5.26e-34 133
MS.gene009784.t1 MTR_5g070040 27.447 470 284 15 11 447 10 455 6.94e-34 133
MS.gene009784.t1 MTR_5g090630 25.410 488 300 14 11 459 4 466 1.64e-33 132
MS.gene009784.t1 MTR_8g012630 35.849 212 106 5 269 454 204 411 1.72e-33 131
MS.gene009784.t1 MTR_4g118000 25.625 480 291 16 16 458 16 466 1.95e-33 132
MS.gene009784.t1 MTR_8g044140 31.136 273 155 6 211 455 178 445 2.35e-33 131
MS.gene009784.t1 MTR_8g090095 25.474 475 296 14 17 458 30 479 3.15e-33 131
MS.gene009784.t1 MTR_6g033660 25.156 481 291 12 13 452 5 457 5.19e-33 130
MS.gene009784.t1 MTR_2g035040 28.460 383 230 10 114 464 24 394 6.12e-33 129
MS.gene009784.t1 MTR_5g019580 25.866 491 287 17 12 451 7 471 1.58e-32 129
MS.gene009784.t1 MTR_2g035020 31.734 271 158 6 212 455 208 478 2.05e-32 129
MS.gene009784.t1 MTR_6g033675 26.327 490 279 16 13 454 5 460 3.27e-32 128
MS.gene009784.t1 MTR_6g035295 25.263 475 309 13 13 451 13 477 4.00e-32 128
MS.gene009784.t1 MTR_8g068330 25.446 448 295 14 12 433 8 442 4.90e-32 127
MS.gene009784.t1 MTR_5g098960 25.926 432 285 14 13 423 8 425 1.49e-31 126
MS.gene009784.t1 MTR_8g006270 29.124 388 217 14 104 455 95 460 1.50e-31 126
MS.gene009784.t1 MTR_8g006260 28.032 371 215 11 114 454 114 462 1.68e-31 126
MS.gene009784.t1 MTR_8g071070 25.826 484 296 16 11 455 6 465 1.71e-31 126
MS.gene009784.t1 MTR_4g117980 32.174 230 127 5 253 458 257 481 3.28e-31 125
MS.gene009784.t1 MTR_5g090610 25.000 472 293 12 11 447 4 449 4.11e-31 125
MS.gene009784.t1 MTR_1g019520 32.864 213 112 5 267 454 2 208 5.37e-31 119
MS.gene009784.t1 MTR_6g014160 28.235 340 189 11 66 378 47 358 8.17e-31 123
MS.gene009784.t1 MTR_4g485640 31.010 287 158 9 195 455 391 663 9.11e-31 125
MS.gene009784.t1 MTR_4g117890 24.268 478 301 14 16 455 17 471 2.61e-30 123
MS.gene009784.t1 MTR_7g012120 33.784 222 123 4 254 451 255 476 2.65e-30 123
MS.gene009784.t1 MTR_5g067170 25.625 480 299 16 16 455 15 476 2.75e-30 123
MS.gene009784.t1 MTR_6g033615 25.268 467 285 14 13 447 5 439 3.07e-30 122
MS.gene009784.t1 MTR_5g019580 25.207 484 271 16 12 451 59 495 6.39e-30 122
MS.gene009784.t1 MTR_8g007650 25.551 454 288 15 10 432 5 439 6.90e-30 121
MS.gene009784.t1 MTR_5g029800 25.210 476 310 16 16 458 15 477 7.77e-30 122
MS.gene009784.t1 MTR_5g039900 29.963 267 144 6 217 451 221 476 1.06e-29 121
MS.gene009784.t1 MTR_6g035185 25.451 499 285 17 16 458 15 482 1.60e-29 120
MS.gene009784.t1 MTR_4g082820 24.949 489 291 18 10 455 5 460 2.01e-29 120
MS.gene009784.t1 MTR_1g040310 30.627 271 156 8 211 455 216 480 2.45e-29 120
MS.gene009784.t1 MTR_8g007565 25.330 454 289 15 10 432 5 439 2.69e-29 120
MS.gene009784.t1 MTR_5g027210 24.842 475 288 13 10 433 2 458 5.84e-29 119
MS.gene009784.t1 MTR_2g034990 24.638 483 302 15 16 455 15 478 6.61e-29 119
MS.gene009784.t1 MTR_6g035265 30.415 217 126 2 267 458 257 473 1.18e-28 118
MS.gene009784.t1 MTR_4g082810 35.714 224 108 11 199 398 196 407 1.71e-28 117
MS.gene009784.t1 MTR_4g128720 22.574 474 301 13 12 455 15 452 3.55e-28 116
MS.gene009784.t1 MTR_7g039550 29.167 264 144 6 220 451 2 254 4.21e-28 113
MS.gene009784.t1 MTR_2086s0010 32.778 180 104 3 291 460 1 173 5.34e-28 109
MS.gene009784.t1 MTR_1996s0010 32.778 180 104 3 291 460 1 173 5.34e-28 109
MS.gene009784.t1 MTR_0009s0240 24.790 476 301 18 11 455 6 455 1.05e-27 115
MS.gene009784.t1 MTR_7g067120 24.091 440 286 15 8 436 5 407 1.15e-27 115
MS.gene009784.t1 MTR_6g078320 24.896 482 306 16 10 452 9 473 1.53e-27 115
MS.gene009784.t1 MTR_5g004940 33.498 203 104 5 267 458 195 377 3.11e-27 113
MS.gene009784.t1 MTR_5g040030 26.124 356 180 10 165 451 139 480 5.49e-27 114
MS.gene009784.t1 MTR_7g071050 34.518 197 108 4 267 443 229 424 1.08e-26 112
MS.gene009784.t1 MTR_2g008225 25.110 454 293 16 12 439 15 447 1.62e-26 112
MS.gene009784.t1 MTR_2g098430 24.544 493 299 20 13 455 7 476 1.77e-26 112
MS.gene009784.t1 MTR_5g072825 50.515 97 40 3 8 102 4 94 4.07e-26 102
MS.gene009784.t1 MTR_4g485590 25.058 431 251 12 10 410 7 395 4.14e-26 110
MS.gene009784.t1 MTR_5g066410 23.596 445 281 14 16 432 2 415 7.34e-26 109
MS.gene009784.t1 MTR_8g068360 24.615 455 289 18 12 433 12 445 1.20e-25 109
MS.gene009784.t1 MTR_7g070870 23.313 489 292 16 8 458 15 458 7.82e-25 107
MS.gene009784.t1 MTR_2g008220 24.672 458 290 17 12 439 14 446 2.05e-24 105
MS.gene009784.t1 MTR_5g066390 32.704 159 91 3 310 459 64 215 2.72e-24 100
MS.gene009784.t1 MTR_7g067330 24.215 446 278 16 8 436 5 407 2.80e-24 105
MS.gene009784.t1 MTR_7g080960 34.081 223 99 6 242 460 294 472 4.41e-24 105
MS.gene009784.t1 MTR_4g123553 23.060 451 301 15 12 439 15 442 4.87e-24 104
MS.gene009784.t1 MTR_8g009840 33.645 214 109 9 266 451 310 518 1.01e-23 104
MS.gene009784.t1 MTR_4g128690 23.913 460 293 18 12 447 15 441 3.97e-23 102
MS.gene009784.t1 MTR_6g014185 29.119 261 138 10 210 459 121 345 1.67e-22 99.0
MS.gene009784.t1 MTR_7g470610 29.018 224 136 5 210 410 69 292 1.98e-22 97.4
MS.gene009784.t1 MTR_7g070583 29.018 224 136 5 210 410 69 292 1.98e-22 97.4
MS.gene009784.t1 MTR_8g068340 23.377 462 290 17 12 436 12 446 2.26e-22 99.8
MS.gene009784.t1 MTR_7g070995 35.338 133 78 2 327 451 5 137 6.17e-22 92.4
MS.gene009784.t1 MTR_1g090270 23.874 444 292 13 12 432 15 435 9.29e-22 97.8
MS.gene009784.t1 MTR_1g107325 28.986 207 121 3 260 458 164 352 9.97e-22 96.7
MS.gene009784.t1 MTR_2g046620 23.427 461 287 18 12 439 16 443 1.35e-21 97.4
MS.gene009784.t1 MTR_6g036650 23.256 473 322 16 12 460 18 473 2.50e-21 96.7
MS.gene009784.t1 MTR_2g008226 23.644 461 292 19 12 435 10 447 3.60e-21 96.3
MS.gene009784.t1 MTR_6g042310 24.053 449 303 17 10 439 16 445 7.24e-21 95.5
MS.gene009784.t1 MTR_3g009490 32.203 177 94 5 295 447 3 177 1.42e-20 89.7
MS.gene009784.t1 MTR_6g014000 34.375 128 77 2 327 454 31 151 7.85e-20 92.4
MS.gene009784.t1 MTR_6g013435 23.864 352 206 11 123 459 3 307 1.86e-19 89.4
MS.gene009784.t1 MTR_4g077960 23.235 439 295 16 22 439 2 419 2.42e-19 90.5
MS.gene009784.t1 MTR_0536s0030 30.573 157 94 3 317 458 195 351 2.51e-18 86.7
MS.gene009784.t1 MTR_7g070760 29.798 198 101 4 211 394 28 201 4.44e-18 83.2
MS.gene009784.t1 MTR_2g083490 23.140 484 287 19 8 444 4 449 2.22e-17 84.7
MS.gene009784.t1 MTR_3g435310 30.337 178 113 5 270 439 227 401 4.60e-17 83.6
MS.gene009784.t1 MTR_8g056740 29.730 185 121 3 216 391 114 298 4.65e-17 83.2
MS.gene009784.t1 MTR_4g059370 25.287 348 217 13 111 433 41 370 1.09e-16 82.0
MS.gene009784.t1 MTR_2g083380 23.218 491 278 20 8 444 21 466 2.47e-16 81.6
MS.gene009784.t1 MTR_5g090690 26.633 199 103 4 240 417 166 342 2.73e-15 77.8
MS.gene009784.t1 MTR_4g079270 24.268 239 160 5 210 436 207 436 4.55e-15 77.4
MS.gene009784.t1 MTR_0078s0200 25.868 317 209 8 10 315 4 305 1.15e-14 75.1
MS.gene009784.t1 MTR_2g014900 21.267 442 296 16 12 426 7 423 3.48e-14 74.7
MS.gene009784.t1 MTR_4g079250 21.681 452 304 15 12 436 8 436 2.69e-13 72.0
MS.gene009784.t1 MTR_3g479620 32.500 160 97 6 12 162 6 163 3.97e-13 67.8
MS.gene009784.t1 MTR_8g006230 30.732 205 126 7 115 316 55 246 1.34e-12 68.6
MS.gene009784.t1 MTR_6g014195 30.645 186 108 8 12 178 10 193 4.72e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene009784.t1 AT2G30150 50.756 463 212 10 1 458 1 452 5.22e-156 450
MS.gene009784.t1 AT2G30150 50.783 447 205 9 16 458 1 436 3.02e-152 440
MS.gene009784.t1 AT2G30140 50.324 463 208 10 4 458 3 451 2.74e-149 433
MS.gene009784.t1 AT2G30140 50.324 463 207 10 4 458 3 450 5.98e-149 432
MS.gene009784.t1 AT2G36970 29.046 482 286 12 12 458 10 470 1.15e-65 219
MS.gene009784.t1 AT2G28080 29.487 468 289 11 16 459 22 472 2.06e-62 210
MS.gene009784.t1 AT1G05680 31.049 467 278 13 11 455 5 449 5.10e-62 208
MS.gene009784.t1 AT2G31750 31.224 474 278 15 11 460 7 456 1.85e-61 207
MS.gene009784.t1 AT1G05675 29.095 464 291 10 11 455 5 449 2.71e-61 207
MS.gene009784.t1 AT2G31750 31.027 477 281 15 11 463 7 459 4.45e-61 207
MS.gene009784.t1 AT2G43840 30.490 469 275 14 12 458 7 446 2.69e-56 193
MS.gene009784.t1 AT2G43840 30.490 469 275 14 12 458 7 446 4.26e-56 193
MS.gene009784.t1 AT1G22400 28.247 485 304 14 12 463 13 486 9.65e-56 193
MS.gene009784.t1 AT1G22380 29.234 496 286 15 12 464 13 486 1.06e-55 192
MS.gene009784.t1 AT1G22360 29.897 485 291 17 12 461 10 480 2.10e-55 192
MS.gene009784.t1 AT1G78270 29.400 483 292 17 12 459 13 481 3.54e-55 191
MS.gene009784.t1 AT4G15480 26.819 481 315 11 6 461 13 481 3.07e-54 189
MS.gene009784.t1 AT4G01070 28.632 475 286 13 10 451 6 460 4.65e-54 188
MS.gene009784.t1 AT5G38040 29.437 462 273 13 20 458 18 449 1.22e-53 186
MS.gene009784.t1 AT3G46660 28.017 464 297 11 8 455 10 452 2.27e-53 186
MS.gene009784.t1 AT1G22340 28.033 478 306 13 12 459 13 482 2.30e-53 186
MS.gene009784.t1 AT2G31790 29.399 466 289 15 12 456 8 454 7.72e-53 184
MS.gene009784.t1 AT2G43820 29.979 467 280 14 12 458 7 446 1.26e-52 184
MS.gene009784.t1 AT1G24100 28.452 478 291 12 7 458 6 458 4.33e-52 182
MS.gene009784.t1 AT3G46670 28.664 464 292 12 8 455 5 445 5.54e-52 182
MS.gene009784.t1 AT3G21560 28.313 498 301 17 1 464 1 476 1.07e-51 182
MS.gene009784.t1 AT1G01420 28.931 477 281 14 10 451 6 459 3.27e-51 181
MS.gene009784.t1 AT1G01420 28.931 477 281 14 10 451 9 462 4.05e-51 180
MS.gene009784.t1 AT1G22360 28.454 485 286 16 12 461 10 468 2.47e-50 178
MS.gene009784.t1 AT5G05900 31.545 466 276 14 13 460 9 449 2.51e-50 177
MS.gene009784.t1 AT5G38010 27.468 466 297 10 12 458 10 453 3.12e-50 177
MS.gene009784.t1 AT4G15490 27.521 476 311 12 7 459 3 467 4.11e-50 177
MS.gene009784.t1 AT5G59580 26.566 463 300 11 12 458 9 447 1.49e-49 176
MS.gene009784.t1 AT3G11340 29.614 466 279 15 13 459 10 445 1.11e-48 173
MS.gene009784.t1 AT2G36800 29.200 500 289 15 12 464 12 493 1.11e-48 174
MS.gene009784.t1 AT2G36750 27.699 491 312 13 9 464 7 489 1.33e-48 174
MS.gene009784.t1 AT1G10400 28.810 479 292 19 11 462 6 462 1.90e-48 173
MS.gene009784.t1 AT4G15500 27.848 474 297 12 12 459 9 463 3.95e-48 172
MS.gene009784.t1 AT5G59590 26.170 470 296 11 11 458 9 449 1.05e-47 170
MS.gene009784.t1 AT3G02100 30.217 460 289 15 12 455 13 456 2.20e-46 167
MS.gene009784.t1 AT2G23250 28.665 457 279 14 21 458 7 435 2.84e-46 166
MS.gene009784.t1 AT1G22370 30.579 484 284 20 12 461 13 478 6.86e-46 166
MS.gene009784.t1 AT5G05880 29.449 472 277 14 12 458 8 448 1.42e-45 165
MS.gene009784.t1 AT1G05560 27.143 490 277 17 8 458 3 451 1.59e-45 165
MS.gene009784.t1 AT1G01390 29.106 481 284 13 10 455 6 464 1.77e-45 165
MS.gene009784.t1 AT1G01390 29.106 481 284 13 10 455 23 481 3.26e-45 165
MS.gene009784.t1 AT2G36780 26.411 496 305 16 9 460 11 490 3.81e-45 164
MS.gene009784.t1 AT3G46680 27.586 464 290 15 12 455 9 446 3.97e-45 163
MS.gene009784.t1 AT2G23260 27.609 460 306 13 11 458 9 453 4.63e-45 163
MS.gene009784.t1 AT1G05560 27.143 490 277 17 8 458 53 501 5.73e-45 164
MS.gene009784.t1 AT2G26480 27.214 463 296 11 13 461 9 444 1.30e-44 162
MS.gene009784.t1 AT4G15550 27.743 483 293 15 8 455 9 470 6.77e-44 160
MS.gene009784.t1 AT3G53160 26.761 497 296 18 12 460 8 484 9.85e-44 160
MS.gene009784.t1 AT2G36790 28.370 497 307 14 2 460 4 489 1.23e-43 160
MS.gene009784.t1 AT5G05870 29.299 471 285 11 12 458 8 454 1.27e-43 160
MS.gene009784.t1 AT2G16890 28.926 484 282 20 12 458 9 467 4.29e-43 159
MS.gene009784.t1 AT5G14860 28.657 499 285 20 12 464 8 481 5.26e-43 159
MS.gene009784.t1 AT3G46650 26.477 457 282 12 13 454 11 428 5.90e-43 157
MS.gene009784.t1 AT4G15280 25.806 496 297 12 12 460 4 475 1.87e-42 157
MS.gene009784.t1 AT4G15280 25.806 496 297 12 12 460 36 507 3.05e-42 157
MS.gene009784.t1 AT2G36770 25.352 497 315 13 9 463 11 493 3.25e-42 156
MS.gene009784.t1 AT5G05890 28.875 471 285 13 12 458 8 452 7.98e-42 154
MS.gene009784.t1 AT2G36760 26.380 489 314 14 9 460 11 490 1.57e-41 154
MS.gene009784.t1 AT3G46720 29.039 458 280 15 13 455 10 437 2.81e-41 153
MS.gene009784.t1 AT3G21790 25.510 490 307 13 12 458 4 478 3.00e-41 154
MS.gene009784.t1 AT3G46700 25.109 458 310 11 12 458 9 444 1.12e-40 151
MS.gene009784.t1 AT3G21800 25.979 485 305 12 13 458 6 475 1.64e-40 151
MS.gene009784.t1 AT3G46690 26.974 456 295 12 12 451 9 442 2.50e-40 150
MS.gene009784.t1 AT5G03490 28.450 471 281 17 5 449 14 454 3.20e-40 150
MS.gene009784.t1 AT3G55700 26.383 470 296 13 13 459 9 451 3.64e-40 150
MS.gene009784.t1 AT2G29740 27.500 480 304 14 11 458 7 474 4.17e-40 150
MS.gene009784.t1 AT2G15480 26.518 494 297 19 12 455 10 487 5.51e-40 150
MS.gene009784.t1 AT1G05530 25.210 476 303 11 12 459 5 455 6.66e-40 149
MS.gene009784.t1 AT2G15480 26.598 485 298 19 12 455 10 477 8.65e-40 149
MS.gene009784.t1 AT3G21780 25.996 477 311 12 12 458 4 468 8.95e-40 149
MS.gene009784.t1 AT5G05860 28.326 466 290 13 12 459 9 448 9.54e-40 149
MS.gene009784.t1 AT2G15490 27.349 479 302 17 12 455 7 474 2.65e-39 148
MS.gene009784.t1 AT2G29730 33.080 263 160 6 212 464 211 467 4.09e-39 147
MS.gene009784.t1 AT3G21750 25.153 489 304 14 11 459 3 469 4.23e-39 147
MS.gene009784.t1 AT2G29750 27.902 491 293 18 11 461 7 476 5.23e-39 147
MS.gene009784.t1 AT4G34131 26.494 502 286 18 7 455 5 476 1.14e-38 146
MS.gene009784.t1 AT2G15490 27.178 482 302 17 12 455 7 477 1.29e-38 146
MS.gene009784.t1 AT3G53150 25.000 500 314 12 12 460 22 511 3.16e-38 146
MS.gene009784.t1 AT3G21760 25.562 489 310 12 12 458 4 480 5.37e-38 145
MS.gene009784.t1 AT1G07250 34.701 268 153 7 208 460 214 474 1.46e-37 143
MS.gene009784.t1 AT2G16890 29.545 440 250 18 12 415 9 424 1.81e-37 142
MS.gene009784.t1 AT5G26310 26.250 480 288 18 12 451 7 460 6.19e-37 142
MS.gene009784.t1 AT2G18570 28.423 482 276 16 12 451 5 459 8.44e-37 141
MS.gene009784.t1 AT5G17050 23.958 480 323 12 1 460 1 458 9.92e-37 140
MS.gene009784.t1 AT2G29710 25.261 479 309 14 11 459 4 463 4.52e-36 139
MS.gene009784.t1 AT4G14090 27.155 464 294 17 12 455 13 452 8.72e-36 138
MS.gene009784.t1 AT3G55710 25.800 469 304 15 13 459 9 455 1.08e-35 138
MS.gene009784.t1 AT1G07260 28.261 368 227 9 115 461 123 474 3.71e-34 134
MS.gene009784.t1 AT4G34138 25.833 480 291 14 12 448 11 468 9.66e-34 133
MS.gene009784.t1 AT5G17030 24.217 479 322 15 1 460 1 457 1.60e-33 132
MS.gene009784.t1 AT4G36770 26.850 473 273 17 12 441 4 446 2.79e-33 131
MS.gene009784.t1 AT3G50740 25.151 497 278 16 12 451 7 466 3.09e-33 131
MS.gene009784.t1 AT4G15260 28.986 276 161 6 211 460 90 356 7.76e-33 128
MS.gene009784.t1 AT1G73880 24.792 480 317 13 5 459 7 467 4.21e-32 128
MS.gene009784.t1 AT5G66690 25.988 481 285 16 12 449 7 459 8.37e-32 127
MS.gene009784.t1 AT2G18560 29.337 392 216 15 96 451 3 369 2.22e-31 124
MS.gene009784.t1 AT1G07240 30.970 268 161 6 210 459 215 476 5.79e-31 125
MS.gene009784.t1 AT5G12890 27.016 496 291 20 8 455 6 478 6.12e-31 125
MS.gene009784.t1 AT5G17040 23.605 466 310 11 11 459 4 440 9.67e-31 124
MS.gene009784.t1 AT5G65550 23.362 458 300 14 7 435 4 439 2.06e-30 123
MS.gene009784.t1 AT4G34135 26.327 490 293 17 12 455 11 478 5.53e-30 122
MS.gene009784.t1 AT5G37950 26.911 327 215 8 58 369 26 343 7.44e-30 119
MS.gene009784.t1 AT1G51210 25.551 454 287 17 4 433 6 432 1.38e-28 117
MS.gene009784.t1 AT5G17040 29.020 255 166 5 210 459 94 338 3.41e-28 114
MS.gene009784.t1 AT1G30530 24.464 466 318 15 7 459 7 451 1.77e-27 114
MS.gene009784.t1 AT5G37950 26.300 327 211 8 58 369 26 337 1.86e-27 112
MS.gene009784.t1 AT1G22370 30.696 316 180 11 170 461 8 308 2.05e-27 112
MS.gene009784.t1 AT5G49690 25.901 444 287 16 12 433 10 433 3.97e-27 114
MS.gene009784.t1 AT3G16520 30.916 262 154 9 210 455 206 456 1.02e-26 112
MS.gene009784.t1 AT4G01070 28.750 320 200 10 10 318 6 308 1.91e-26 110
MS.gene009784.t1 AT3G22250 23.956 455 286 14 13 430 9 440 1.80e-25 108
MS.gene009784.t1 AT3G16520 35.859 198 106 6 210 391 206 398 5.69e-25 107
MS.gene009784.t1 AT3G16520 35.859 198 106 6 210 391 206 398 7.06e-25 107
MS.gene009784.t1 AT1G06000 23.237 482 277 19 12 458 10 433 1.11e-21 97.4
MS.gene009784.t1 AT2G22590 22.198 455 303 17 12 436 15 448 6.00e-21 95.5
MS.gene009784.t1 AT1G64910 21.542 441 292 14 10 429 4 411 4.55e-15 77.4
MS.gene009784.t1 AT3G29630 21.296 432 289 13 12 415 6 414 1.12e-14 76.3
MS.gene009784.t1 AT5G53990 20.000 435 302 12 12 429 6 411 9.30e-14 73.6
MS.gene009784.t1 AT5G54060 21.598 463 334 11 13 459 14 463 1.96e-13 72.8
MS.gene009784.t1 AT5G54010 20.554 433 308 12 12 429 6 417 3.99e-13 71.6
MS.gene009784.t1 AT4G34135 24.629 337 200 13 12 315 11 326 1.38e-12 69.3
MS.gene009784.t1 AT4G27570 20.833 432 293 14 12 415 7 417 1.46e-11 66.6
MS.gene009784.t1 AT4G27560 20.045 444 306 12 12 432 7 424 1.93e-11 66.2
MS.gene009784.t1 AT1G50580 20.669 329 226 7 112 429 108 412 7.49e-11 64.3

Find 114 sgRNAs with CRISPR-Local

Find 156 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACATGATAGTTATTTGTTT+TGG 0.190342 5.3:+57519354 MS.gene009784:CDS
TAGGCTTGTTAGAAGATTTA+TGG 0.205219 5.3:+57520664 MS.gene009784:CDS
AATAATATGAAAGCCTTTCT+TGG 0.246704 5.3:+57520779 MS.gene009784:CDS
AAAGGTTGGTCCATCATTAT+TGG 0.266008 5.3:-57520548 None:intergenic
TGAAGCTGTTGCTACTAAAA+TGG 0.273399 5.3:+57519277 MS.gene009784:CDS
GTGGTGGGTGGAGGAGGATT+TGG 0.277697 5.3:-57519017 None:intergenic
GTTAGAAGATTTATGGATTT+GGG 0.281168 5.3:+57520671 MS.gene009784:CDS
CATCGTGAAGTTGAAAATCT+TGG 0.286582 5.3:-57519986 None:intergenic
TGTTAGAAGATTTATGGATT+TGG 0.300533 5.3:+57520670 MS.gene009784:CDS
GTAGGTCCAATTGTGTAAAT+TGG 0.309840 5.3:-57520149 None:intergenic
TATAATCATGTTTAACATCT+TGG 0.318063 5.3:-57520217 None:intergenic
GAAAGATATTTGTGGGGATA+AGG 0.325851 5.3:+57520397 MS.gene009784:CDS
TCTATACCAATTTACACAAT+TGG 0.329382 5.3:+57520143 MS.gene009784:CDS
ATCTTTGCCTCGACCTTCTT+CGG 0.344761 5.3:-57519240 None:intergenic
GGGTTGATGTGGCCGCGACC+TGG 0.348374 5.3:-57519062 None:intergenic
AACTAACCTGAAGCATTTAC+TGG 0.357766 5.3:-57519491 None:intergenic
TTGAGGCTCAAGTTCATATA+TGG 0.359393 5.3:-57520093 None:intergenic
AAACGTGTGGATTACATTCC+GGG 0.361089 5.3:+57519945 MS.gene009784:CDS
TCTTCGGAGGGAACTACGTT+TGG 0.361946 5.3:-57519224 None:intergenic
ATAGTTGAGGATTGGAAAGT+TGG 0.365038 5.3:+57520584 MS.gene009784:CDS
GATTACCCAGTAAATGCTTC+AGG 0.373708 5.3:+57519485 MS.gene009784:CDS
CAAACGTGTGGATTACATTC+CGG 0.374925 5.3:+57519944 MS.gene009784:CDS
ATGTTCATGTTGCGTCGTTT+TGG 0.385300 5.3:+57519402 MS.gene009784:CDS
CTTTGGCCGTGACTAAAATA+AGG 0.387209 5.3:-57520176 None:intergenic
AAAGATATTTGTGGGGATAA+GGG 0.388826 5.3:+57520398 MS.gene009784:CDS
TATGAAAATGTTGAGGTTGT+TGG 0.398570 5.3:-57519114 None:intergenic
TGGCTAGATAATCAACCCTT+TGG 0.405021 5.3:+57520245 MS.gene009784:CDS
CTCCATTTGCAACTGCACTT+TGG 0.421432 5.3:-57520745 None:intergenic
AGCTTGCATAGGTTCATCAT+TGG 0.421746 5.3:-57519083 None:intergenic
TCTTACCTCTCCAATAATGA+TGG 0.427830 5.3:+57520538 MS.gene009784:CDS
TAGTTGAGGATTGGAAAGTT+GGG 0.447378 5.3:+57520585 MS.gene009784:CDS
GTGGGTGGAGGAGGATTTGG+AGG 0.452077 5.3:-57519014 None:intergenic
AGAAGAAACGACGCCGACAT+AGG 0.455999 5.3:-57519425 None:intergenic
AGTTGGGTGGAGAGTGGAGA+CGG 0.457769 5.3:+57520601 MS.gene009784:CDS
AACGTAGTTCCCTCCGAAGA+AGG 0.458701 5.3:+57519227 MS.gene009784:CDS
CCATTCTTCTGTGACTATGA+AGG 0.462954 5.3:-57519138 None:intergenic
CTAAGTGGAAAGATATTTGT+GGG 0.463305 5.3:+57520390 MS.gene009784:CDS
GCTTGCATAGGTTCATCATT+GGG 0.465865 5.3:-57519082 None:intergenic
TTTCTTGGTAATATATTACA+TGG 0.470876 5.3:+57520794 MS.gene009784:CDS
TGCCAAAGTGCAGTTGCAAA+TGG 0.473909 5.3:+57520743 MS.gene009784:CDS
ATGTAATATATTACCAAGAA+AGG 0.476400 5.3:-57520792 None:intergenic
TATGCATCAACACTCTCAAT+TGG 0.478373 5.3:-57520442 None:intergenic
AAGATATTTGTGGGGATAAG+GGG 0.481885 5.3:+57520399 MS.gene009784:CDS
ACGTGAGTGGTGGGTGGAGG+AGG 0.483465 5.3:-57519023 None:intergenic
TTGTAGGGTCGGAGTTGATG+AGG 0.485403 5.3:-57519166 None:intergenic
TTGGAAAGTTGGGTGGAGAG+TGG 0.485928 5.3:+57520595 MS.gene009784:CDS
TTACAAGAGTTGCGAATAAG+AGG 0.487308 5.3:+57519378 MS.gene009784:CDS
GAATCAAGTAGTTTCTCAAA+TGG 0.489984 5.3:-57519305 None:intergenic
ATCATGTTTAACATCTTGGT+TGG 0.495001 5.3:-57520213 None:intergenic
TGTAGGGTCGGAGTTGATGA+GGG 0.497360 5.3:-57519165 None:intergenic
ACTACGTGAGTGGTGGGTGG+AGG 0.499536 5.3:-57519026 None:intergenic
GTAAGTATATAGTTGAGGAT+TGG 0.500681 5.3:+57520576 MS.gene009784:CDS
AGGAGGATTTGGAGGTTCCA+TGG 0.502238 5.3:-57519006 None:intergenic
ATGTGGCCGCGACCTGGGTA+TGG 0.506573 5.3:-57519056 None:intergenic
ATTATTGGAGAGGTAAGAAA+AGG 0.507093 5.3:-57520533 None:intergenic
TATTGTGCTTTCTTCATCCA+TGG 0.508332 5.3:-57520056 None:intergenic
ACTATATACTTACTATTCAA+AGG 0.508938 5.3:-57520566 None:intergenic
GAGCTAATTCTAACAATCTA+CGG 0.512987 5.3:-57520022 None:intergenic
TCTAAGTGGAAAGATATTTG+TGG 0.514263 5.3:+57520389 MS.gene009784:CDS
AGACGAATTGATGTGTTCCC+CGG 0.515037 5.3:-57519963 None:intergenic
TATACTTACTATTCAAAGGT+TGG 0.524591 5.3:-57520562 None:intergenic
CTTAAAACATCAATTGCTTG+AGG 0.525457 5.3:-57520110 None:intergenic
GTGTTGATGCATAGTGCTAT+AGG 0.529886 5.3:+57520452 MS.gene009784:CDS
CCTTCATAGTCACAGAAGAA+TGG 0.530348 5.3:+57519138 MS.gene009784:CDS
TTAAACATGATTATATAACT+TGG 0.531569 5.3:+57520225 MS.gene009784:CDS
GGTTGATGTGGCCGCGACCT+GGG 0.543493 5.3:-57519061 None:intergenic
GGGTGGAATTCAACTAGAGA+AGG 0.545369 5.3:+57520494 MS.gene009784:CDS
CAAATCAATGAAATTGCGAA+TGG 0.547383 5.3:+57520317 MS.gene009784:CDS
GGGAACTACGTTTGGAATGG+TGG 0.550077 5.3:-57519216 None:intergenic
TGACTAAAATAAGGTATGGT+AGG 0.550916 5.3:-57520167 None:intergenic
TAAGAAGAGATGAAATTGCT+AGG 0.556457 5.3:+57520645 MS.gene009784:CDS
GAATAGTAAGTATATAGTTG+AGG 0.557074 5.3:+57520571 MS.gene009784:CDS
GCCGTGACTAAAATAAGGTA+TGG 0.560100 5.3:-57520171 None:intergenic
CAAAGTGCAGTTGCAAATGG+AGG 0.563559 5.3:+57520746 MS.gene009784:CDS
TTGCCTCGACCTTCTTCGGA+GGG 0.564321 5.3:-57519236 None:intergenic
TTGAGGATTGGAAAGTTGGG+TGG 0.569689 5.3:+57520588 MS.gene009784:CDS
GGCTCAAGTTCATATATGGA+AGG 0.573714 5.3:-57520089 None:intergenic
GGTTCATCATTGGGTTGATG+TGG 0.578474 5.3:-57519073 None:intergenic
GGAGGGAACTACGTTTGGAA+TGG 0.580154 5.3:-57519219 None:intergenic
GACATATAGAACAGAACCAA+AGG 0.583623 5.3:-57520261 None:intergenic
ATCTTGGTTGGTGCTTAGAG+AGG 0.584062 5.3:-57520201 None:intergenic
CTATCATGTATAATCACACT+CGG 0.585298 5.3:-57519341 None:intergenic
GCGAATGGTTTGCGCGAAAG+TGG 0.587045 5.3:+57520332 MS.gene009784:CDS
ACATATAGAACAGAACCAAA+GGG 0.592505 5.3:-57520260 None:intergenic
GTTCCCTCCGAAGAAGGTCG+AGG 0.594862 5.3:+57519233 MS.gene009784:CDS
GCCGCGACCTGGGTATGGTA+CGG 0.595928 5.3:-57519051 None:intergenic
TGGTGCTTAGAGAGGCACTT+TGG 0.597056 5.3:-57520193 None:intergenic
TTTGCCTCGACCTTCTTCGG+AGG 0.601667 5.3:-57519237 None:intergenic
TTGGTCCATCATTATTGGAG+AGG 0.607037 5.3:-57520543 None:intergenic
TCTGTTCTATATGTCTCACA+AGG 0.608612 5.3:+57520269 MS.gene009784:CDS
TAGCTCTGAATAACATACCA+TGG 0.609800 5.3:+57520039 MS.gene009784:CDS
TGGGTGGAGAGTGGAGACGG+AGG 0.613549 5.3:+57520604 MS.gene009784:CDS
GCCGTACCATACCCAGGTCG+CGG 0.613664 5.3:+57519050 MS.gene009784:CDS
TACGGCTACTACGTGAGTGG+TGG 0.618240 5.3:-57519033 None:intergenic
TGGAGATTAAGAGCTTGCAT+AGG 0.622718 5.3:-57519094 None:intergenic
GCTCAAGTTCATATATGGAA+GGG 0.622979 5.3:-57520088 None:intergenic
AAAGTGCAGTTGCAAATGGA+GGG 0.623483 5.3:+57520747 MS.gene009784:CDS
AACGTGTGGATTACATTCCG+GGG 0.625241 5.3:+57519946 MS.gene009784:CDS
GGATTTGGGTGATGAAGTGA+AGG 0.625760 5.3:+57520685 MS.gene009784:CDS
TGCGTGGAGAAAGTTCTAAG+TGG 0.625771 5.3:+57520375 MS.gene009784:CDS
GTGATGAAGTGAAGGAAATG+AGG 0.630372 5.3:+57520693 MS.gene009784:CDS
ACGGCTACTACGTGAGTGGT+GGG 0.632053 5.3:-57519032 None:intergenic
ACTAACCTGAAGCATTTACT+GGG 0.632218 5.3:-57519490 None:intergenic
TGAAGGTTATGAAAATGTTG+AGG 0.642161 5.3:-57519121 None:intergenic
AAAGTGGTGTTAGATTCTTG+TGG 0.666670 5.3:+57520348 MS.gene009784:CDS
AGAAGTTGGTGACAAACGTG+TGG 0.670943 5.3:+57519932 MS.gene009784:intron
GCTACTACGTGAGTGGTGGG+TGG 0.675528 5.3:-57519029 None:intergenic
AGATTCTTGTGGATAATGCG+TGG 0.682535 5.3:+57520359 MS.gene009784:CDS
TGGTACGGCTACTACGTGAG+TGG 0.683850 5.3:-57519036 None:intergenic
ACTCTCAATTGGTCACACCA+TGG 0.684804 5.3:-57520431 None:intergenic
TAAGTGGAAAGATATTTGTG+GGG 0.693286 5.3:+57520391 MS.gene009784:CDS
TTGATGCATAGTGCTATAGG+TGG 0.705531 5.3:+57520455 MS.gene009784:CDS
GTAGTAGCCGTACCATACCC+AGG 0.710129 5.3:+57519044 MS.gene009784:CDS
CTGTTCTATATGTCTCACAA+GGG 0.733356 5.3:+57520270 MS.gene009784:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTATTTATGTGTTTTTAT+GGG + chr5.3:57519554-57519573 MS.gene009784:intron 10.0%
!!! TATTTATTTATGTGTTTTTA+TGG + chr5.3:57519553-57519572 MS.gene009784:intron 10.0%
!!! TCTTATTTTTAATTTTGTAT+GGG + chr5.3:57519797-57519816 MS.gene009784:intron 10.0%
!!! TTATTATCATAGTTTTTTTT+AGG - chr5.3:57519855-57519874 None:intergenic 10.0%
!! TTAAACATGATTATATAACT+TGG + chr5.3:57520225-57520244 MS.gene009784:CDS 15.0%
!!! GTCTTATTTTTAATTTTGTA+TGG + chr5.3:57519796-57519815 MS.gene009784:intron 15.0%
!!! TACTGTTTTTACTAAATTTA+AGG + chr5.3:57519518-57519537 MS.gene009784:intron 15.0%
!! ACTATATACTTACTATTCAA+AGG - chr5.3:57520569-57520588 None:intergenic 20.0%
!! ATGTAATATATTACCAAGAA+AGG - chr5.3:57520795-57520814 None:intergenic 20.0%
!! CATTAATTATAGTTTAGGAA+TGG + chr5.3:57519681-57519700 MS.gene009784:intron 20.0%
!! CATTCCTAAACTATAATTAA+TGG - chr5.3:57519683-57519702 None:intergenic 20.0%
!! GATAAACTCAAAAAAATAGA+TGG + chr5.3:57519628-57519647 MS.gene009784:intron 20.0%
!! TATAATCATGTTTAACATCT+TGG - chr5.3:57520220-57520239 None:intergenic 20.0%
!!! AAAGGCTTTCATATTATTTT+CGG - chr5.3:57520777-57520796 None:intergenic 20.0%
!!! ACATGATAGTTATTTGTTTT+GGG + chr5.3:57519355-57519374 MS.gene009784:CDS 20.0%
!!! TACATGATAGTTATTTGTTT+TGG + chr5.3:57519354-57519373 MS.gene009784:CDS 20.0%
!!! TTTCTTGGTAATATATTACA+TGG + chr5.3:57520794-57520813 MS.gene009784:CDS 20.0%
!!! TTTTGTTGTTTGTTTTTGTA+GGG - chr5.3:57519184-57519203 None:intergenic 20.0%
!!! TTTTTGTTGTTTGTTTTTGT+AGG - chr5.3:57519185-57519204 None:intergenic 20.0%
! AAACTATAATTAATGGTGGT+GGG - chr5.3:57519676-57519695 None:intergenic 25.0%
! AACTCAAAAAAATAGATGGT+TGG + chr5.3:57519632-57519651 MS.gene009784:intron 25.0%
! AATAATATGAAAGCCTTTCT+TGG + chr5.3:57520779-57520798 MS.gene009784:CDS 25.0%
! AATAGATGAAGTTTGCAATT+CGG + chr5.3:57519600-57519619 MS.gene009784:intron 25.0%
! ACCACCATTAATTATAGTTT+AGG + chr5.3:57519676-57519695 MS.gene009784:intron 25.0%
! GAATAGTAAGTATATAGTTG+AGG + chr5.3:57520571-57520590 MS.gene009784:CDS 25.0%
! GTTAGAAGATTTATGGATTT+GGG + chr5.3:57520671-57520690 MS.gene009784:CDS 25.0%
! TAAACTATAATTAATGGTGG+TGG - chr5.3:57519677-57519696 None:intergenic 25.0%
! TATACTTACTATTCAAAGGT+TGG - chr5.3:57520565-57520584 None:intergenic 25.0%
! TCCTAAACTATAATTAATGG+TGG - chr5.3:57519680-57519699 None:intergenic 25.0%
! TCTATACCAATTTACACAAT+TGG + chr5.3:57520143-57520162 MS.gene009784:CDS 25.0%
! TGTTAGAAGATTTATGGATT+TGG + chr5.3:57520670-57520689 MS.gene009784:CDS 25.0%
!! TCTTAAACATTTTCGTCTTT+TGG + chr5.3:57519451-57519470 MS.gene009784:CDS 25.0%
AAAGATATTTGTGGGGATAA+GGG + chr5.3:57520398-57520417 MS.gene009784:CDS 30.0%
ACATATAGAACAGAACCAAA+GGG - chr5.3:57520263-57520282 None:intergenic 30.0%
ACGAAAAGCAAATATACATC+AGG - chr5.3:57519756-57519775 None:intergenic 30.0%
ACTTCATCTATTGTACCAAA+TGG - chr5.3:57519592-57519611 None:intergenic 30.0%
ATCATGTTTAACATCTTGGT+TGG - chr5.3:57520216-57520235 None:intergenic 30.0%
ATTATTGGAGAGGTAAGAAA+AGG - chr5.3:57520536-57520555 None:intergenic 30.0%
CAAATCAATGAAATTGCGAA+TGG + chr5.3:57520317-57520336 MS.gene009784:CDS 30.0%
CTAAGTGGAAAGATATTTGT+GGG + chr5.3:57520390-57520409 MS.gene009784:CDS 30.0%
CTATCATGTATAATCACACT+CGG - chr5.3:57519344-57519363 None:intergenic 30.0%
CTTAAAACATCAATTGCTTG+AGG - chr5.3:57520113-57520132 None:intergenic 30.0%
GAATCAAGTAGTTTCTCAAA+TGG - chr5.3:57519308-57519327 None:intergenic 30.0%
GAGCTAATTCTAACAATCTA+CGG - chr5.3:57520025-57520044 None:intergenic 30.0%
GTAAGTATATAGTTGAGGAT+TGG + chr5.3:57520576-57520595 MS.gene009784:CDS 30.0%
TAAATTGTTGCAACAGAAGT+TGG + chr5.3:57519918-57519937 MS.gene009784:intron 30.0%
TAAGAAGAGATGAAATTGCT+AGG + chr5.3:57520645-57520664 MS.gene009784:CDS 30.0%
TAAGTGGAAAGATATTTGTG+GGG + chr5.3:57520391-57520410 MS.gene009784:CDS 30.0%
TAGAGAGAGTTATAGCTTAT+GGG + chr5.3:57519707-57519726 MS.gene009784:intron 30.0%
TATGAAAATGTTGAGGTTGT+TGG - chr5.3:57519117-57519136 None:intergenic 30.0%
TCTAAGTGGAAAGATATTTG+TGG + chr5.3:57520389-57520408 MS.gene009784:CDS 30.0%
TGAAGGTTATGAAAATGTTG+AGG - chr5.3:57519124-57519143 None:intergenic 30.0%
TGACTAAAATAAGGTATGGT+AGG - chr5.3:57520170-57520189 None:intergenic 30.0%
TTAGAGAGAGTTATAGCTTA+TGG + chr5.3:57519706-57519725 MS.gene009784:intron 30.0%
TTTCGTGTATTTATCAGTTG+AGG + chr5.3:57519770-57519789 MS.gene009784:intron 30.0%
!! TAGGCTTGTTAGAAGATTTA+TGG + chr5.3:57520664-57520683 MS.gene009784:CDS 30.0%
!! TTTCGTCTTTTGGAGAAAAA+TGG + chr5.3:57519461-57519480 MS.gene009784:CDS 30.0%
!!! ACCATACCTTATTTTAGTCA+CGG + chr5.3:57520170-57520189 MS.gene009784:CDS 30.0%
AAGATATTTGTGGGGATAAG+GGG + chr5.3:57520399-57520418 MS.gene009784:CDS 35.0%
ATAGTTGAGGATTGGAAAGT+TGG + chr5.3:57520584-57520603 MS.gene009784:CDS 35.0%
ATCTATTGTACCAAATGGAG+AGG - chr5.3:57519587-57519606 None:intergenic 35.0%
CATCGTGAAGTTGAAAATCT+TGG - chr5.3:57519989-57520008 None:intergenic 35.0%
CTGTTCTATATGTCTCACAA+GGG + chr5.3:57520270-57520289 MS.gene009784:CDS 35.0%
GAAAGATATTTGTGGGGATA+AGG + chr5.3:57520397-57520416 MS.gene009784:CDS 35.0%
GACATATAGAACAGAACCAA+AGG - chr5.3:57520264-57520283 None:intergenic 35.0%
GCTCAAGTTCATATATGGAA+GGG - chr5.3:57520091-57520110 None:intergenic 35.0%
GTAGGTCCAATTGTGTAAAT+TGG - chr5.3:57520152-57520171 None:intergenic 35.0%
GTGTATTTATCAGTTGAGGT+TGG + chr5.3:57519774-57519793 MS.gene009784:intron 35.0%
TAGTTGAGGATTGGAAAGTT+GGG + chr5.3:57520585-57520604 MS.gene009784:CDS 35.0%
TATGCATCAACACTCTCAAT+TGG - chr5.3:57520445-57520464 None:intergenic 35.0%
TATTGTGCTTTCTTCATCCA+TGG - chr5.3:57520059-57520078 None:intergenic 35.0%
TCTGTTCTATATGTCTCACA+AGG + chr5.3:57520269-57520288 MS.gene009784:CDS 35.0%
TCTTACCTCTCCAATAATGA+TGG + chr5.3:57520538-57520557 MS.gene009784:CDS 35.0%
TGAAGCTGTTGCTACTAAAA+TGG + chr5.3:57519277-57519296 MS.gene009784:CDS 35.0%
TTACAAGAGTTGCGAATAAG+AGG + chr5.3:57519378-57519397 MS.gene009784:CDS 35.0%
TTGAGGCTCAAGTTCATATA+TGG - chr5.3:57520096-57520115 None:intergenic 35.0%
! AAAGGTTGGTCCATCATTAT+TGG - chr5.3:57520551-57520570 None:intergenic 35.0%
! AAAGTGGTGTTAGATTCTTG+TGG + chr5.3:57520348-57520367 MS.gene009784:CDS 35.0%
! AACTAACCTGAAGCATTTAC+TGG - chr5.3:57519494-57519513 None:intergenic 35.0%
! ACTAACCTGAAGCATTTACT+GGG - chr5.3:57519493-57519512 None:intergenic 35.0%
! ATAGTGCTATAGGTGGTTTT+TGG + chr5.3:57520462-57520481 MS.gene009784:CDS 35.0%
!! TAGCTCTGAATAACATACCA+TGG + chr5.3:57520039-57520058 MS.gene009784:CDS 35.0%
!!! ACTAGAGAAGGTTTGTTTTG+TGG + chr5.3:57520506-57520525 MS.gene009784:CDS 35.0%
!!! GTTGTTTGTTTTTGTAGGGT+CGG - chr5.3:57519180-57519199 None:intergenic 35.0%
AAAGTGCAGTTGCAAATGGA+GGG + chr5.3:57520747-57520766 MS.gene009784:CDS 40.0%
AGATTCTTGTGGATAATGCG+TGG + chr5.3:57520359-57520378 MS.gene009784:CDS 40.0%
AGCTTGCATAGGTTCATCAT+TGG - chr5.3:57519086-57519105 None:intergenic 40.0%
CCATTCTTCTGTGACTATGA+AGG - chr5.3:57519141-57519160 None:intergenic 40.0%
CCTTCATAGTCACAGAAGAA+TGG + chr5.3:57519138-57519157 MS.gene009784:CDS 40.0%
CTTTGGCCGTGACTAAAATA+AGG - chr5.3:57520179-57520198 None:intergenic 40.0%
GATTACCCAGTAAATGCTTC+AGG + chr5.3:57519485-57519504 MS.gene009784:CDS 40.0%
GCCGTGACTAAAATAAGGTA+TGG - chr5.3:57520174-57520193 None:intergenic 40.0%
GCTTGCATAGGTTCATCATT+GGG - chr5.3:57519085-57519104 None:intergenic 40.0%
GGCTCAAGTTCATATATGGA+AGG - chr5.3:57520092-57520111 None:intergenic 40.0%
GTGATGAAGTGAAGGAAATG+AGG + chr5.3:57520693-57520712 MS.gene009784:CDS 40.0%
TGGAGATTAAGAGCTTGCAT+AGG - chr5.3:57519097-57519116 None:intergenic 40.0%
TGGCTAGATAATCAACCCTT+TGG + chr5.3:57520245-57520264 MS.gene009784:CDS 40.0%
TTGATGCATAGTGCTATAGG+TGG + chr5.3:57520455-57520474 MS.gene009784:CDS 40.0%
TTGGTCCATCATTATTGGAG+AGG - chr5.3:57520546-57520565 None:intergenic 40.0%
! AAACGTGTGGATTACATTCC+GGG + chr5.3:57519945-57519964 MS.gene009784:CDS 40.0%
! ATGTTCATGTTGCGTCGTTT+TGG + chr5.3:57519402-57519421 MS.gene009784:CDS 40.0%
! CAAACGTGTGGATTACATTC+CGG + chr5.3:57519944-57519963 MS.gene009784:CDS 40.0%
! CTCACAAGGGAGTTTTCTTT+CGG + chr5.3:57520283-57520302 MS.gene009784:CDS 40.0%
! GTGTTGATGCATAGTGCTAT+AGG + chr5.3:57520452-57520471 MS.gene009784:CDS 40.0%
!!! ATAAGGGGTTTGTTTTGCCA+TGG + chr5.3:57520414-57520433 MS.gene009784:CDS 40.0%
!!! GTGGTTTTTGGTCACATTGT+GGG + chr5.3:57520474-57520493 MS.gene009784:CDS 40.0%
ACTCTCAATTGGTCACACCA+TGG - chr5.3:57520434-57520453 None:intergenic 45.0%
AGACGAATTGATGTGTTCCC+CGG - chr5.3:57519966-57519985 None:intergenic 45.0%
ATCTTTGCCTCGACCTTCTT+CGG - chr5.3:57519243-57519262 None:intergenic 45.0%
CAAAGTGCAGTTGCAAATGG+AGG + chr5.3:57520746-57520765 MS.gene009784:CDS 45.0%
CTCCATTTGCAACTGCACTT+TGG - chr5.3:57520748-57520767 None:intergenic 45.0%
GGATTTGGGTGATGAAGTGA+AGG + chr5.3:57520685-57520704 MS.gene009784:CDS 45.0%
GGGTGGAATTCAACTAGAGA+AGG + chr5.3:57520494-57520513 MS.gene009784:CDS 45.0%
GGGTTAAGATCCTCTCCATT+TGG + chr5.3:57519574-57519593 MS.gene009784:intron 45.0%
TGCCAAAGTGCAGTTGCAAA+TGG + chr5.3:57520743-57520762 MS.gene009784:CDS 45.0%
TTGAGGATTGGAAAGTTGGG+TGG + chr5.3:57520588-57520607 MS.gene009784:CDS 45.0%
! AACGTGTGGATTACATTCCG+GGG + chr5.3:57519946-57519965 MS.gene009784:CDS 45.0%
! ATCTTGGTTGGTGCTTAGAG+AGG - chr5.3:57520204-57520223 None:intergenic 45.0%
!! AGAAGTTGGTGACAAACGTG+TGG + chr5.3:57519932-57519951 MS.gene009784:intron 45.0%
!! GGTTCATCATTGGGTTGATG+TGG - chr5.3:57519076-57519095 None:intergenic 45.0%
!! TGCGTGGAGAAAGTTCTAAG+TGG + chr5.3:57520375-57520394 MS.gene009784:CDS 45.0%
!!! GGTGGTTTTTGGTCACATTG+TGG + chr5.3:57520473-57520492 MS.gene009784:CDS 45.0%
!!! GTTTTTGGTCACATTGTGGG+TGG + chr5.3:57520477-57520496 MS.gene009784:CDS 45.0%
AACGTAGTTCCCTCCGAAGA+AGG + chr5.3:57519227-57519246 MS.gene009784:CDS 50.0%
AGAAGAAACGACGCCGACAT+AGG - chr5.3:57519428-57519447 None:intergenic 50.0%
GGAGGGAACTACGTTTGGAA+TGG - chr5.3:57519222-57519241 None:intergenic 50.0%
TCTTCGGAGGGAACTACGTT+TGG - chr5.3:57519227-57519246 None:intergenic 50.0%
TTGGAAAGTTGGGTGGAGAG+TGG + chr5.3:57520595-57520614 MS.gene009784:CDS 50.0%
! GGGAACTACGTTTGGAATGG+TGG - chr5.3:57519219-57519238 None:intergenic 50.0%
! GGTTGGTCCTACCACTAAGT+AGG + chr5.3:57519649-57519668 MS.gene009784:intron 50.0%
!! TGCGTCGTTTTGGCCTATGT+CGG + chr5.3:57519412-57519431 MS.gene009784:CDS 50.0%
!! TGGTGCTTAGAGAGGCACTT+TGG - chr5.3:57520196-57520215 None:intergenic 50.0%
!! TGTAGGGTCGGAGTTGATGA+GGG - chr5.3:57519168-57519187 None:intergenic 50.0%
!! TTGTAGGGTCGGAGTTGATG+AGG - chr5.3:57519169-57519188 None:intergenic 50.0%
ACGGCTACTACGTGAGTGGT+GGG - chr5.3:57519035-57519054 None:intergenic 55.0%
AGTTGGGTGGAGAGTGGAGA+CGG + chr5.3:57520601-57520620 MS.gene009784:CDS 55.0%
GGTGGGACCTACTTAGTGGT+AGG - chr5.3:57519659-57519678 None:intergenic 55.0%
GTAGTAGCCGTACCATACCC+AGG + chr5.3:57519044-57519063 MS.gene009784:CDS 55.0%
TACGGCTACTACGTGAGTGG+TGG - chr5.3:57519036-57519055 None:intergenic 55.0%
TGGTACGGCTACTACGTGAG+TGG - chr5.3:57519039-57519058 None:intergenic 55.0%
TTGCCTCGACCTTCTTCGGA+GGG - chr5.3:57519239-57519258 None:intergenic 55.0%
TTTGCCTCGACCTTCTTCGG+AGG - chr5.3:57519240-57519259 None:intergenic 55.0%
! GCGAATGGTTTGCGCGAAAG+TGG + chr5.3:57520332-57520351 MS.gene009784:CDS 55.0%
!! TGGTGGTGGGACCTACTTAG+TGG - chr5.3:57519663-57519682 None:intergenic 55.0%
GTGGGTGGAGGAGGATTTGG+AGG - chr5.3:57519017-57519036 None:intergenic 60.0%
GTTCCCTCCGAAGAAGGTCG+AGG + chr5.3:57519233-57519252 MS.gene009784:CDS 60.0%
! GCTACTACGTGAGTGGTGGG+TGG - chr5.3:57519032-57519051 None:intergenic 60.0%
!! ACTACGTGAGTGGTGGGTGG+AGG - chr5.3:57519029-57519048 None:intergenic 60.0%
!! GTGGTGGGTGGAGGAGGATT+TGG - chr5.3:57519020-57519039 None:intergenic 60.0%
ATGTGGCCGCGACCTGGGTA+TGG - chr5.3:57519059-57519078 None:intergenic 65.0%
GCCGCGACCTGGGTATGGTA+CGG - chr5.3:57519054-57519073 None:intergenic 65.0%
GCCGTACCATACCCAGGTCG+CGG + chr5.3:57519050-57519069 MS.gene009784:CDS 65.0%
TGGGTGGAGAGTGGAGACGG+AGG + chr5.3:57520604-57520623 MS.gene009784:CDS 65.0%
! GGTTGATGTGGCCGCGACCT+GGG - chr5.3:57519064-57519083 None:intergenic 65.0%
!! ACGTGAGTGGTGGGTGGAGG+AGG - chr5.3:57519026-57519045 None:intergenic 65.0%
!! GGGTTGATGTGGCCGCGACC+TGG - chr5.3:57519065-57519084 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 57519008 57520829 57519008 ID=MS.gene009784
chr5.3 mRNA 57519008 57520829 57519008 ID=MS.gene009784.t1;Parent=MS.gene009784
chr5.3 exon 57519008 57519506 57519008 ID=MS.gene009784.t1.exon1;Parent=MS.gene009784.t1
chr5.3 CDS 57519008 57519506 57519008 ID=cds.MS.gene009784.t1;Parent=MS.gene009784.t1
chr5.3 exon 57519934 57520829 57519934 ID=MS.gene009784.t1.exon2;Parent=MS.gene009784.t1
chr5.3 CDS 57519934 57520829 57519934 ID=cds.MS.gene009784.t1;Parent=MS.gene009784.t1
Gene Sequence

>MS.gene009784

ATGGAACCTCCAAATCCTCCTCCACCCACCACTCACGTAGTAGCCGTACCATACCCAGGTCGCGGCCACATCAACCCAATGATGAACCTATGCAAGCTCTTAATCTCCAACAACCTCAACATTTTCATAACCTTCATAGTCACAGAAGAATGGCTCACCCTCATCAACTCCGACCCTACAAAAACAAACAACAAAAACATCAAATTTGCCACCATTCCAAACGTAGTTCCCTCCGAAGAAGGTCGAGGCAAAGATTTTCTTAATTTTTTTGAAGCTGTTGCTACTAAAATGGAAGAGCCATTTGAGAAACTACTTGATTCTTTTGAGACAGTGCCGAGTGTGATTATACATGATAGTTATTTGTTTTGGGTTACAAGAGTTGCGAATAAGAGGAATGTTCATGTTGCGTCGTTTTGGCCTATGTCGGCGTCGTTTCTTCTTGTTCTTAAACATTTTCGTCTTTTGGAGAAAAATGGTGATTACCCAGTAAATGCTTCAGGTTAGTTACTTTACTGTTTTTACTAAATTTAAGGTACTTTTCATTTTATTTATTTATGTGTTTTTATGGGTTAAGATCCTCTCCATTTGGTACAATAGATGAAGTTTGCAATTCGGAAATAGATAAACTCAAAAAAATAGATGGTTGGTCCTACCACTAAGTAGGTCCCACCACCATTAATTATAGTTTAGGAATGGAATTAGAGAGAGTTATAGCTTATGGGTTAAATCGATGTTTTACTCGACACCTGATGTATATTTGCTTTTCGTGTATTTATCAGTTGAGGTTGGTCTTATTTTTAATTTTGTATGGGATATGTCTCTTCTATAGTTTAATGTAATATTGCCTAAAAAAAACTATGATAATAAACACAATTTTTACATTAGAATATTGTGTGTTTTGTGTGTTGCTTAAATTGTTGCAACAGAAGTTGGTGACAAACGTGTGGATTACATTCCGGGGAACACATCAATTCGTCTCCAAGATTTTCAACTTCACGATGCAAACTTACGCATCCGTAGATTGTTAGAATTAGCTCTGAATAACATACCATGGATGAAGAAAGCACAATATCTATTATTCCCTTCCATATATGAACTTGAGCCTCAAGCAATTGATGTTTTAAGAGAAGAATTTTCTATACCAATTTACACAATTGGACCTACCATACCTTATTTTAGTCACGGCCAAAGTGCCTCTCTAAGCACCAACCAAGATGTTAAACATGATTATATAACTTGGCTAGATAATCAACCCTTTGGTTCTGTTCTATATGTCTCACAAGGGAGTTTTCTTTCGGTTTCAAGTGAACAAATCAATGAAATTGCGAATGGTTTGCGCGAAAGTGGTGTTAGATTCTTGTGGATAATGCGTGGAGAAAGTTCTAAGTGGAAAGATATTTGTGGGGATAAGGGGTTTGTTTTGCCATGGTGTGACCAATTGAGAGTGTTGATGCATAGTGCTATAGGTGGTTTTTGGTCACATTGTGGGTGGAATTCAACTAGAGAAGGTTTGTTTTGTGGTGTGCCTTTTCTTACCTCTCCAATAATGATGGACCAACCTTTGAATAGTAAGTATATAGTTGAGGATTGGAAAGTTGGGTGGAGAGTGGAGACGGAGGTTAAAGATGATGTTTTGATAAGAAGAGATGAAATTGCTAGGCTTGTTAGAAGATTTATGGATTTGGGTGATGAAGTGAAGGAAATGAGGAAAAGAGCAAGAGATCTTCAACAAATATGCCAAAGTGCAGTTGCAAATGGAGGGTCATCCGAAAATAATATGAAAGCCTTTCTTGGTAATATATTACATGGATTCAAACCATAG
Protein sequence

>MS.gene009784.t1

MEPPNPPPPTTHVVAVPYPGRGHINPMMNLCKLLISNNLNIFITFIVTEEWLTLINSDPTKTNNKNIKFATIPNVVPSEEGRGKDFLNFFEAVATKMEEPFEKLLDSFETVPSVIIHDSYLFWVTRVANKRNVHVASFWPMSASFLLVLKHFRLLEKNGDYPVNASEVGDKRVDYIPGNTSIRLQDFQLHDANLRIRRLLELALNNIPWMKKAQYLLFPSIYELEPQAIDVLREEFSIPIYTIGPTIPYFSHGQSASLSTNQDVKHDYITWLDNQPFGSVLYVSQGSFLSVSSEQINEIANGLRESGVRFLWIMRGESSKWKDICGDKGFVLPWCDQLRVLMHSAIGGFWSHCGWNSTREGLFCGVPFLTSPIMMDQPLNSKYIVEDWKVGWRVETEVKDDVLIRRDEIARLVRRFMDLGDEVKEMRKRARDLQQICQSAVANGGSSENNMKAFLGNILHGFKP