AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene009785

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene009785.t1 MTR_5g072860 95.374 454 20 1 15 467 18 471 0.0 893
MS.gene009785.t1 MTR_5g075440 56.579 456 193 4 10 463 5 457 0.0 533
MS.gene009785.t1 MTR_3g031400 54.176 467 183 9 4 462 7 450 2.06e-176 503
MS.gene009785.t1 MTR_3g031450 53.961 467 186 9 4 462 7 452 9.52e-176 501
MS.gene009785.t1 MTR_5g072810 51.656 453 208 7 12 461 9 453 1.89e-159 459
MS.gene009785.t1 MTR_5g072840 49.567 462 213 9 7 462 2 449 8.18e-152 439
MS.gene009785.t1 MTR_5g072820 50.108 465 204 10 7 461 2 448 5.21e-151 437
MS.gene009785.t1 MTR_5g072830 48.817 465 210 9 7 461 2 448 1.06e-148 432
MS.gene009785.t1 MTR_5g072850 47.921 457 158 11 9 462 3 382 1.75e-136 398
MS.gene009785.t1 MTR_8g059425 31.633 490 282 16 15 467 10 483 2.57e-62 210
MS.gene009785.t1 MTR_7g011470 32.777 479 269 15 15 462 10 466 4.54e-62 209
MS.gene009785.t1 MTR_2g008210 31.237 477 289 15 15 462 11 477 1.34e-61 208
MS.gene009785.t1 MTR_6g014040 30.722 485 286 15 15 462 10 481 2.08e-61 208
MS.gene009785.t1 MTR_8g088560 31.343 469 285 13 12 461 7 457 4.29e-61 206
MS.gene009785.t1 MTR_6g014270 31.161 491 287 15 15 467 7 484 9.29e-61 206
MS.gene009785.t1 MTR_6g013440 30.165 484 289 14 15 462 11 481 5.51e-60 204
MS.gene009785.t1 MTR_7g080950 29.979 467 286 15 15 463 6 449 1.26e-59 202
MS.gene009785.t1 MTR_3g008010 30.266 489 286 16 12 462 7 478 1.29e-59 203
MS.gene009785.t1 MTR_6g014200 31.612 484 282 15 15 462 7 477 1.59e-59 202
MS.gene009785.t1 MTR_7g011470 32.150 479 268 15 15 462 10 462 3.95e-59 201
MS.gene009785.t1 MTR_6g014290 30.658 486 282 17 15 462 10 478 5.53e-59 201
MS.gene009785.t1 MTR_5g035580 31.236 461 277 17 15 458 13 450 7.80e-59 201
MS.gene009785.t1 MTR_6g038240 29.569 487 296 16 1 467 1 460 1.18e-58 200
MS.gene009785.t1 MTR_3g069710 29.870 462 287 9 16 462 13 452 1.53e-58 199
MS.gene009785.t1 MTR_6g011340 30.691 492 276 16 15 462 10 480 3.49e-58 199
MS.gene009785.t1 MTR_5g464810 30.928 485 282 18 14 462 11 478 5.98e-58 198
MS.gene009785.t1 MTR_5g064240 30.928 485 282 18 14 462 11 478 5.98e-58 198
MS.gene009785.t1 MTR_6g013900 31.161 491 280 17 12 462 7 479 8.20e-58 198
MS.gene009785.t1 MTR_6g038300 29.668 482 283 16 7 461 3 455 8.72e-58 197
MS.gene009785.t1 MTR_6g013920 31.568 491 278 17 12 462 7 479 1.44e-57 197
MS.gene009785.t1 MTR_0288s0020 30.083 482 273 16 15 462 10 461 2.43e-57 196
MS.gene009785.t1 MTR_3g479520 30.435 483 289 14 15 463 15 484 3.54e-57 197
MS.gene009785.t1 MTR_0036s0220 30.290 482 287 17 15 462 12 478 5.87e-57 196
MS.gene009785.t1 MTR_6g014020 30.372 484 288 14 15 462 10 480 8.93e-57 196
MS.gene009785.t1 MTR_6g013960 29.012 486 292 16 15 462 10 480 1.15e-56 195
MS.gene009785.t1 MTR_5g035560 30.316 475 281 19 15 467 11 457 1.62e-56 195
MS.gene009785.t1 MTR_6g014300 29.938 481 278 15 15 462 12 466 1.69e-56 194
MS.gene009785.t1 MTR_6g014187 28.980 490 297 15 15 467 10 485 1.72e-56 195
MS.gene009785.t1 MTR_6g014310 29.485 485 291 13 15 462 11 481 2.26e-56 194
MS.gene009785.t1 MTR_6g014250 29.691 485 288 16 15 462 10 478 2.99e-56 194
MS.gene009785.t1 MTR_6g014150 31.417 487 289 14 15 467 7 482 4.04e-56 194
MS.gene009785.t1 MTR_3g079480 29.814 483 292 14 15 463 21 490 4.31e-56 194
MS.gene009785.t1 MTR_6g014220 30.103 485 286 16 15 462 10 478 5.08e-56 193
MS.gene009785.t1 MTR_6g038220 29.218 486 286 13 1 461 1 453 5.34e-56 192
MS.gene009785.t1 MTR_3g479490 29.461 482 293 14 15 462 6 474 7.94e-56 193
MS.gene009785.t1 MTR_6g013990 30.849 483 285 17 15 462 10 478 8.20e-56 193
MS.gene009785.t1 MTR_5g464760 29.607 483 291 16 15 462 12 480 1.65e-55 192
MS.gene009785.t1 MTR_4g094220 29.532 491 285 16 11 458 3 475 1.96e-55 192
MS.gene009785.t1 MTR_6g013450 29.897 485 290 14 15 462 10 481 2.05e-55 192
MS.gene009785.t1 MTR_7g080940 29.979 467 286 13 15 463 11 454 2.90e-55 191
MS.gene009785.t1 MTR_6g014050 30.658 486 284 16 15 462 11 481 5.28e-55 191
MS.gene009785.t1 MTR_5g058320 30.561 481 276 16 15 462 10 465 1.12e-54 189
MS.gene009785.t1 MTR_6g014170 30.943 488 272 18 15 467 10 467 1.89e-54 189
MS.gene009785.t1 MTR_7g080900 28.814 472 291 16 13 463 10 457 7.39e-54 187
MS.gene009785.t1 MTR_8g083290 29.918 488 273 14 16 462 5 464 7.90e-54 187
MS.gene009785.t1 MTR_1g107380 28.980 490 277 16 15 462 13 473 9.65e-54 187
MS.gene009785.t1 MTR_3g069690 27.742 465 299 8 14 462 7 450 1.28e-53 186
MS.gene009785.t1 MTR_8g083280 29.796 490 272 13 16 465 8 465 4.26e-53 185
MS.gene009785.t1 MTR_6g038200 29.060 468 291 14 13 461 9 454 6.55e-53 184
MS.gene009785.t1 MTR_6g038230 28.755 466 293 15 14 461 10 454 1.29e-52 184
MS.gene009785.t1 MTR_4g094920 29.274 468 296 13 16 462 27 480 2.50e-52 184
MS.gene009785.t1 MTR_4g095008 27.941 476 300 15 12 462 8 465 4.54e-52 184
MS.gene009785.t1 MTR_4g064987 30.085 472 275 14 16 462 9 450 2.42e-51 180
MS.gene009785.t1 MTR_6g014240 28.926 484 275 15 15 467 7 452 4.84e-51 179
MS.gene009785.t1 MTR_3g084520 29.376 497 271 18 15 461 6 472 6.98e-51 179
MS.gene009785.t1 MTR_7g080935 30.128 468 284 14 15 463 11 454 1.08e-50 179
MS.gene009785.t1 MTR_3g084540 29.691 485 286 19 15 461 6 473 1.05e-49 176
MS.gene009785.t1 MTR_3g049970 29.350 477 291 15 15 461 9 469 1.52e-49 176
MS.gene009785.t1 MTR_7g102460 27.778 504 289 15 15 466 9 489 1.79e-49 176
MS.gene009785.t1 MTR_3g479470 28.067 481 302 14 15 463 13 481 2.10e-49 176
MS.gene009785.t1 MTR_8g064870 28.092 477 297 12 16 461 12 473 7.14e-49 174
MS.gene009785.t1 MTR_4g064987 29.449 472 272 14 16 462 9 444 9.45e-49 173
MS.gene009785.t1 MTR_0184s0040 29.691 485 268 15 13 454 19 473 2.05e-48 173
MS.gene009785.t1 MTR_0078s0190 29.691 485 268 15 13 454 19 473 2.05e-48 173
MS.gene009785.t1 MTR_7g070660 27.557 479 305 13 15 461 11 479 2.35e-48 173
MS.gene009785.t1 MTR_1g107375 29.310 464 299 12 12 461 5 453 2.50e-48 172
MS.gene009785.t1 MTR_5g016480 26.915 483 301 13 16 464 9 473 2.68e-48 172
MS.gene009785.t1 MTR_7g070610 29.730 481 283 17 15 454 13 479 3.45e-48 173
MS.gene009785.t1 MTR_5g098930 26.653 484 299 11 16 463 6 469 4.92e-48 172
MS.gene009785.t1 MTR_3g084530 28.157 483 295 17 15 461 6 472 9.98e-48 171
MS.gene009785.t1 MTR_7g047030 30.417 480 264 19 13 450 4 455 1.39e-47 171
MS.gene009785.t1 MTR_7g047270 30.417 480 264 19 13 450 4 455 1.39e-47 171
MS.gene009785.t1 MTR_7g102490 27.600 500 299 15 14 466 8 491 1.52e-47 171
MS.gene009785.t1 MTR_8g043470 28.878 419 231 9 67 467 14 383 2.32e-47 168
MS.gene009785.t1 MTR_1g107360 29.854 479 272 16 15 458 9 458 3.28e-47 169
MS.gene009785.t1 MTR_8g009050 27.824 478 287 15 13 454 4 459 1.10e-46 168
MS.gene009785.t1 MTR_5g031840 27.966 472 304 14 13 461 3 461 1.47e-46 167
MS.gene009785.t1 MTR_1g107350 27.579 475 302 14 15 461 8 468 1.74e-46 168
MS.gene009785.t1 MTR_0078s0010 29.228 479 271 16 13 450 4 455 2.25e-46 167
MS.gene009785.t1 MTR_7g070800 29.289 478 285 16 15 454 6 468 3.05e-46 167
MS.gene009785.t1 MTR_8g009063 28.834 489 274 15 13 457 11 469 3.12e-46 167
MS.gene009785.t1 MTR_7g055710 28.333 480 290 16 15 454 11 476 5.09e-46 167
MS.gene009785.t1 MTR_8g009073 30.165 484 266 16 13 454 4 457 5.20e-46 166
MS.gene009785.t1 MTR_8g009055 27.743 483 281 14 13 454 4 459 7.18e-46 166
MS.gene009785.t1 MTR_1g107365 28.333 480 287 15 15 465 45 496 9.13e-46 166
MS.gene009785.t1 MTR_7g013200 27.912 455 294 10 15 458 5 436 1.10e-45 165
MS.gene009785.t1 MTR_7g070860 29.247 465 288 15 15 454 7 455 2.61e-45 164
MS.gene009785.t1 MTR_7g070940 27.778 486 296 15 9 458 3 469 3.18e-45 164
MS.gene009785.t1 MTR_1g107315 27.824 478 303 14 12 461 5 468 6.15e-45 164
MS.gene009785.t1 MTR_8g008990 27.941 476 291 12 13 454 4 461 6.70e-45 163
MS.gene009785.t1 MTR_5g031830 27.470 506 286 14 1 461 1 470 1.44e-44 162
MS.gene009785.t1 MTR_7g013240 28.540 459 285 13 15 458 6 436 1.51e-44 162
MS.gene009785.t1 MTR_7g117170 28.778 483 291 12 4 454 7 468 1.97e-44 162
MS.gene009785.t1 MTR_4g024020 27.495 491 302 14 15 462 9 488 3.66e-44 162
MS.gene009785.t1 MTR_7g013180 29.158 463 274 17 15 452 5 438 4.21e-44 160
MS.gene009785.t1 MTR_7g071040 28.364 483 287 16 15 454 17 483 5.76e-44 161
MS.gene009785.t1 MTR_8g077590 30.126 478 265 15 13 450 7 455 1.13e-43 160
MS.gene009785.t1 MTR_2g040530 26.489 487 297 14 12 461 2 464 1.67e-43 159
MS.gene009785.t1 MTR_8g465670 27.536 483 291 13 14 458 6 467 1.85e-43 159
MS.gene009785.t1 MTR_8g006730 29.124 491 268 17 14 457 5 462 1.98e-43 159
MS.gene009785.t1 MTR_7g070780 28.131 487 296 16 15 461 11 483 2.32e-43 160
MS.gene009785.t1 MTR_0078s0060 29.485 485 269 17 13 454 4 458 3.45e-43 159
MS.gene009785.t1 MTR_8g064880 29.652 489 280 16 15 461 9 475 3.71e-43 159
MS.gene009785.t1 MTR_5g031860 26.572 493 306 12 1 461 1 469 3.98e-43 159
MS.gene009785.t1 MTR_7g013260 28.664 464 279 15 15 458 6 437 4.77e-43 157
MS.gene009785.t1 MTR_1g062380 27.345 501 297 16 12 463 13 495 5.48e-43 159
MS.gene009785.t1 MTR_4g485630 28.542 487 286 17 15 461 9 473 6.80e-43 158
MS.gene009785.t1 MTR_8g027885 27.673 477 277 17 16 454 19 465 8.38e-43 158
MS.gene009785.t1 MTR_1g107285 28.450 471 296 13 16 461 9 463 9.89e-43 157
MS.gene009785.t1 MTR_8g006710 29.218 486 269 19 16 457 7 461 1.55e-42 157
MS.gene009785.t1 MTR_0184s0030 28.025 471 288 13 13 450 4 456 1.60e-42 157
MS.gene009785.t1 MTR_3g479610 31.833 311 182 8 172 463 15 314 1.84e-42 153
MS.gene009785.t1 MTR_1g032490 26.667 480 308 13 11 461 6 470 1.91e-42 157
MS.gene009785.t1 MTR_1g019510 28.454 485 272 16 13 454 4 456 4.24e-42 155
MS.gene009785.t1 MTR_7g117405 27.364 497 285 16 15 462 12 481 7.88e-42 155
MS.gene009785.t1 MTR_7g102560 27.092 502 296 16 15 467 9 489 1.17e-41 155
MS.gene009785.t1 MTR_5g070090 28.721 477 286 20 1 450 1 450 1.45e-41 154
MS.gene009785.t1 MTR_4g108250 27.140 479 301 14 15 454 11 480 1.61e-41 155
MS.gene009785.t1 MTR_8g027870 27.651 481 272 17 16 454 19 465 2.77e-41 154
MS.gene009785.t1 MTR_8g066610 27.789 493 280 16 15 458 9 474 6.13e-41 153
MS.gene009785.t1 MTR_8g008970 29.132 484 271 15 13 454 4 457 7.97e-41 156
MS.gene009785.t1 MTR_8g008970 32.685 257 155 6 206 454 535 781 4.78e-29 121
MS.gene009785.t1 MTR_8g012635 29.132 484 284 15 13 457 4 467 1.54e-40 151
MS.gene009785.t1 MTR_7g070810 27.054 499 280 16 15 461 9 475 1.58e-40 152
MS.gene009785.t1 MTR_3g009510 26.749 486 291 14 14 454 4 469 1.81e-40 151
MS.gene009785.t1 MTR_7g070930 27.254 488 306 13 5 454 4 480 2.58e-40 151
MS.gene009785.t1 MTR_7g070910 27.101 476 302 14 15 454 11 477 2.73e-40 151
MS.gene009785.t1 MTR_5g045970 26.614 511 287 15 12 463 13 494 3.57e-40 151
MS.gene009785.t1 MTR_7g070740 27.607 489 282 17 15 454 11 476 5.53e-40 150
MS.gene009785.t1 MTR_7g046490 34.304 309 150 9 178 454 169 456 5.95e-40 150
MS.gene009785.t1 MTR_8g012650 31.429 385 207 13 115 462 111 475 8.36e-40 149
MS.gene009785.t1 MTR_5g045960 26.441 503 290 15 15 462 9 486 9.84e-40 149
MS.gene009785.t1 MTR_7g102450 27.066 484 297 15 15 463 11 473 1.19e-39 149
MS.gene009785.t1 MTR_6g033625 28.238 471 280 16 16 450 5 453 1.34e-39 149
MS.gene009785.t1 MTR_8g009067 28.008 482 287 14 13 458 4 461 1.75e-39 149
MS.gene009785.t1 MTR_6g023665 27.178 482 287 15 14 457 12 467 2.65e-39 148
MS.gene009785.t1 MTR_5g090580 26.190 504 287 15 14 463 4 476 3.48e-39 148
MS.gene009785.t1 MTR_6g005600 27.883 477 291 13 12 454 3 460 5.35e-39 147
MS.gene009785.t1 MTR_8g009073 33.667 300 165 7 178 454 40 328 6.67e-39 144
MS.gene009785.t1 MTR_2g046820 25.255 491 290 15 12 458 2 459 1.22e-38 146
MS.gene009785.t1 MTR_1g029540 27.021 470 286 16 20 461 19 459 1.40e-38 146
MS.gene009785.t1 MTR_8g006220 26.815 496 287 14 14 458 5 475 1.66e-38 146
MS.gene009785.t1 MTR_7g013220 27.991 468 288 14 15 458 5 447 2.03e-38 145
MS.gene009785.t1 MTR_5g090620 25.761 493 300 16 16 463 6 477 2.04e-38 145
MS.gene009785.t1 MTR_8g012745 30.189 371 214 10 115 457 111 464 2.67e-38 145
MS.gene009785.t1 MTR_6g033725 25.996 477 294 14 16 457 5 457 4.06e-38 145
MS.gene009785.t1 MTR_4g008630 28.067 481 278 18 16 461 15 462 4.59e-38 144
MS.gene009785.t1 MTR_5g090670 26.523 509 281 16 14 463 4 478 7.20e-38 144
MS.gene009785.t1 MTR_4g031800 24.949 489 301 12 16 463 10 473 7.55e-38 144
MS.gene009785.t1 MTR_2g046750 26.078 487 294 15 12 458 2 462 7.77e-38 144
MS.gene009785.t1 MTR_0891s0010 30.769 299 177 8 184 463 4 291 1.01e-37 139
MS.gene009785.t1 MTR_4g485620 29.471 397 227 13 99 463 84 459 1.08e-37 143
MS.gene009785.t1 MTR_8g009067 31.908 304 173 7 178 458 51 343 1.93e-37 140
MS.gene009785.t1 MTR_6g014190 30.405 296 179 8 183 462 3 287 2.59e-37 138
MS.gene009785.t1 MTR_5g090660 25.202 496 294 13 14 462 4 469 3.02e-37 144
MS.gene009785.t1 MTR_0477s0010 28.329 353 200 7 125 462 3 317 3.31e-37 139
MS.gene009785.t1 MTR_5g070040 27.366 486 293 15 14 465 10 469 4.85e-37 142
MS.gene009785.t1 MTR_4g117950 26.446 484 288 15 19 463 10 464 1.41e-36 140
MS.gene009785.t1 MTR_7g102520 25.549 501 319 14 8 466 5 493 1.92e-36 140
MS.gene009785.t1 MTR_4g117960 26.025 488 294 19 19 461 15 480 3.61e-36 140
MS.gene009785.t1 MTR_6g488280 26.994 489 279 16 14 457 5 460 4.92e-36 139
MS.gene009785.t1 MTR_0428s0010 26.994 489 279 16 14 457 5 460 4.92e-36 139
MS.gene009785.t1 MTR_5g090700 24.291 494 311 14 14 463 4 478 7.09e-36 139
MS.gene009785.t1 MTR_5g090600 25.478 471 311 12 14 463 4 455 9.51e-36 138
MS.gene009785.t1 MTR_6g033675 26.195 481 291 14 16 457 5 460 1.05e-35 138
MS.gene009785.t1 MTR_7g102550 25.400 500 303 17 9 458 3 482 1.21e-35 138
MS.gene009785.t1 MTR_6g033660 26.667 465 304 13 16 455 5 457 1.35e-35 138
MS.gene009785.t1 MTR_8g074550 26.547 501 282 18 14 454 7 481 1.57e-35 138
MS.gene009785.t1 MTR_6g013680 28.401 419 223 15 67 462 11 375 1.65e-35 135
MS.gene009785.t1 MTR_8g012730 37.662 231 112 6 253 457 80 304 1.97e-35 134
MS.gene009785.t1 MTR_5g098960 26.096 479 296 17 16 466 8 456 3.07e-35 136
MS.gene009785.t1 MTR_0536s0020 26.489 487 291 17 16 461 19 479 4.17e-35 137
MS.gene009785.t1 MTR_6g014186 25.519 482 276 13 15 462 7 439 1.26e-34 134
MS.gene009785.t1 MTR_5g090630 25.662 491 295 13 14 462 4 466 1.41e-34 135
MS.gene009785.t1 MTR_6g033615 26.522 460 288 14 16 450 5 439 1.50e-34 134
MS.gene009785.t1 MTR_5g019580 26.220 492 284 15 15 454 7 471 2.07e-34 135
MS.gene009785.t1 MTR_8g466240 28.151 476 279 20 14 458 7 450 5.36e-34 133
MS.gene009785.t1 MTR_0536s0010 26.240 484 284 17 19 461 25 476 7.38e-34 133
MS.gene009785.t1 MTR_8g007585 34.634 205 117 3 267 462 196 392 8.80e-34 131
MS.gene009785.t1 MTR_8g012630 36.620 213 104 5 271 457 204 411 2.73e-33 130
MS.gene009785.t1 MTR_5g019580 26.653 484 264 17 15 454 59 495 7.70e-33 130
MS.gene009785.t1 MTR_6g014160 27.941 340 190 12 68 380 47 358 9.61e-33 128
MS.gene009785.t1 MTR_6g035295 25.000 480 304 15 16 454 13 477 1.54e-32 129
MS.gene009785.t1 MTR_5g067170 27.178 482 289 17 19 458 15 476 1.76e-32 129
MS.gene009785.t1 MTR_0009s0240 24.842 475 306 14 12 458 4 455 1.99e-32 129
MS.gene009785.t1 MTR_4g118000 25.519 482 289 16 19 461 16 466 3.19e-32 128
MS.gene009785.t1 MTR_2g059240 25.150 501 304 17 1 462 1 469 3.43e-32 128
MS.gene009785.t1 MTR_8g090095 26.465 495 266 18 20 461 30 479 5.23e-32 128
MS.gene009785.t1 MTR_5g087620 25.099 506 302 17 15 463 10 495 5.60e-32 128
MS.gene009785.t1 MTR_5g016660 27.979 386 224 9 104 454 110 476 1.34e-31 127
MS.gene009785.t1 MTR_8g044140 27.182 401 251 14 86 458 58 445 1.57e-31 126
MS.gene009785.t1 MTR_8g071070 24.040 495 295 16 12 458 4 465 1.86e-31 126
MS.gene009785.t1 MTR_8g006270 29.041 365 207 12 117 450 109 452 3.09e-31 125
MS.gene009785.t1 MTR_1g019520 33.023 215 112 5 268 457 1 208 3.60e-31 119
MS.gene009785.t1 MTR_5g090610 24.498 498 285 15 14 461 4 460 3.97e-31 125
MS.gene009785.t1 MTR_8g068330 25.223 448 299 13 15 439 8 442 6.03e-31 124
MS.gene009785.t1 MTR_4g485640 31.716 268 148 9 219 458 403 663 9.43e-31 125
MS.gene009785.t1 MTR_8g032950 27.559 381 225 12 114 461 118 480 1.03e-30 124
MS.gene009785.t1 MTR_8g006260 28.611 360 217 11 116 450 114 458 1.26e-30 124
MS.gene009785.t1 MTR_8g007650 24.944 449 297 11 13 435 5 439 2.02e-30 123
MS.gene009785.t1 MTR_7g012120 36.792 212 109 5 267 454 266 476 2.04e-30 123
MS.gene009785.t1 MTR_2g035040 29.178 377 216 13 116 458 24 383 2.36e-30 122
MS.gene009785.t1 MTR_6g078320 25.255 491 293 19 13 455 9 473 2.88e-30 123
MS.gene009785.t1 MTR_4g082820 25.466 483 296 16 13 458 5 460 3.83e-30 122
MS.gene009785.t1 MTR_4g117980 34.101 217 118 5 269 461 266 481 5.05e-30 122
MS.gene009785.t1 MTR_8g007565 24.722 449 298 11 13 435 5 439 8.80e-30 121
MS.gene009785.t1 MTR_4g117890 25.364 481 298 16 16 458 14 471 1.65e-29 120
MS.gene009785.t1 MTR_2g035020 26.327 490 285 19 19 458 15 478 1.79e-29 120
MS.gene009785.t1 MTR_6g035185 25.873 487 298 17 19 461 15 482 3.22e-29 120
MS.gene009785.t1 MTR_7g071050 26.350 463 255 15 15 444 13 422 9.16e-29 118
MS.gene009785.t1 MTR_5g029800 25.458 491 290 20 19 461 15 477 1.06e-28 118
MS.gene009785.t1 MTR_2g098430 23.517 489 309 18 16 458 7 476 1.23e-28 118
MS.gene009785.t1 MTR_4g082810 28.058 417 244 18 13 392 5 402 1.83e-28 117
MS.gene009785.t1 MTR_5g039900 26.525 377 228 10 110 454 117 476 2.32e-28 117
MS.gene009785.t1 MTR_7g070870 24.297 498 294 16 2 461 6 458 3.85e-28 116
MS.gene009785.t1 MTR_5g072825 57.732 97 35 4 9 104 3 94 5.25e-28 107
MS.gene009785.t1 MTR_7g067120 25.225 444 276 15 11 439 5 407 5.82e-28 115
MS.gene009785.t1 MTR_2g034990 26.240 484 293 19 19 458 15 478 7.53e-28 116
MS.gene009785.t1 MTR_4g128720 21.684 475 304 13 15 458 15 452 8.90e-28 115
MS.gene009785.t1 MTR_1g040310 26.630 368 238 11 114 458 122 480 9.15e-28 116
MS.gene009785.t1 MTR_2086s0010 32.597 181 104 3 293 463 1 173 2.37e-27 108
MS.gene009785.t1 MTR_1996s0010 32.597 181 104 3 293 463 1 173 2.37e-27 108
MS.gene009785.t1 MTR_8g068360 25.306 490 290 19 15 462 12 467 2.05e-26 111
MS.gene009785.t1 MTR_6g035265 24.066 482 304 18 19 461 15 473 2.10e-26 112
MS.gene009785.t1 MTR_2g008225 24.270 445 302 15 15 439 15 444 2.19e-26 111
MS.gene009785.t1 MTR_5g066410 23.649 444 282 11 19 435 2 415 2.46e-26 111
MS.gene009785.t1 MTR_7g080960 31.696 224 104 4 244 463 294 472 4.38e-26 110
MS.gene009785.t1 MTR_5g027210 24.017 483 282 14 13 436 2 458 5.69e-26 110
MS.gene009785.t1 MTR_4g128690 21.909 461 317 12 15 458 15 449 1.63e-25 108
MS.gene009785.t1 MTR_7g039550 29.057 265 144 7 222 454 2 254 2.07e-25 105
MS.gene009785.t1 MTR_2g008220 24.612 451 293 14 15 439 14 443 3.39e-25 108
MS.gene009785.t1 MTR_4g485590 25.768 423 221 14 13 393 7 378 8.31e-25 106
MS.gene009785.t1 MTR_5g004940 32.843 204 105 4 269 461 195 377 8.72e-25 106
MS.gene009785.t1 MTR_4g123553 22.991 448 299 15 15 439 15 439 2.35e-24 105
MS.gene009785.t1 MTR_5g040030 26.075 372 224 10 117 454 126 480 2.76e-24 105
MS.gene009785.t1 MTR_7g067330 26.233 446 269 18 11 439 5 407 3.38e-24 105
MS.gene009785.t1 MTR_7g470610 26.688 311 182 9 125 412 5 292 3.85e-24 102
MS.gene009785.t1 MTR_7g070583 26.688 311 182 9 125 412 5 292 3.85e-24 102
MS.gene009785.t1 MTR_8g009840 33.178 214 109 8 269 454 311 518 9.41e-24 104
MS.gene009785.t1 MTR_5g066390 33.125 160 90 3 312 462 64 215 1.46e-23 99.0
MS.gene009785.t1 MTR_8g068340 25.110 454 281 17 15 430 12 444 1.85e-22 100
MS.gene009785.t1 MTR_6g036650 23.789 454 295 15 15 439 18 449 2.41e-22 99.8
MS.gene009785.t1 MTR_3g009490 32.967 182 95 5 297 454 3 181 5.23e-22 93.6
MS.gene009785.t1 MTR_6g013435 23.714 350 210 10 125 462 3 307 6.00e-22 96.7
MS.gene009785.t1 MTR_7g070995 39.098 133 72 3 330 454 6 137 6.48e-22 92.4
MS.gene009785.t1 MTR_1g090270 23.385 449 300 11 15 439 15 443 2.13e-21 97.1
MS.gene009785.t1 MTR_1g107325 31.667 180 113 2 290 461 175 352 2.26e-21 95.9
MS.gene009785.t1 MTR_6g014185 27.799 259 145 9 212 462 121 345 1.16e-20 93.6
MS.gene009785.t1 MTR_4g077960 23.767 446 278 17 25 439 2 416 1.68e-20 94.0
MS.gene009785.t1 MTR_6g042310 22.547 479 307 19 13 461 16 460 2.33e-20 94.0
MS.gene009785.t1 MTR_2g046620 22.958 453 293 18 15 439 16 440 2.46e-20 93.6
MS.gene009785.t1 MTR_7g070760 29.851 201 103 4 213 399 28 204 3.29e-19 86.3
MS.gene009785.t1 MTR_2g008226 28.444 225 136 8 225 436 233 445 4.03e-19 90.1
MS.gene009785.t1 MTR_6g014000 34.109 129 77 2 329 457 31 151 4.68e-19 90.1
MS.gene009785.t1 MTR_2g083490 23.956 455 298 15 11 439 4 436 4.01e-18 87.0
MS.gene009785.t1 MTR_0536s0030 32.704 159 89 5 319 461 195 351 6.70e-18 85.5
MS.gene009785.t1 MTR_4g059370 23.988 346 230 8 112 439 40 370 1.45e-17 84.7
MS.gene009785.t1 MTR_3g435310 30.857 175 109 5 273 439 228 398 2.03e-17 84.7
MS.gene009785.t1 MTR_2g083380 24.123 456 296 15 11 439 21 453 3.30e-17 84.3
MS.gene009785.t1 MTR_8g056740 32.317 164 97 4 271 425 168 326 9.90e-17 82.4
MS.gene009785.t1 MTR_4g079270 24.686 239 160 4 212 439 207 436 1.09e-16 82.4
MS.gene009785.t1 MTR_0078s0200 25.316 316 211 8 13 317 4 305 1.10e-16 81.3
MS.gene009785.t1 MTR_4g079250 25.676 296 182 9 166 439 157 436 8.19e-16 79.7
MS.gene009785.t1 MTR_5g090690 28.488 172 84 3 269 419 189 342 3.32e-15 77.4
MS.gene009785.t1 MTR_2g014900 23.868 243 156 5 193 424 195 419 5.83e-14 74.3
MS.gene009785.t1 MTR_8g006230 29.756 205 128 7 117 318 55 246 1.26e-13 71.6
MS.gene009785.t1 MTR_2g083430 23.478 460 286 19 15 439 8 436 1.17e-12 70.1
MS.gene009785.t1 MTR_3g479620 30.000 160 100 5 15 164 6 163 5.66e-12 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene009785.t1 AT2G30150 52.052 463 207 8 3 461 1 452 7.72e-166 476
MS.gene009785.t1 AT2G30150 52.349 447 198 8 19 461 1 436 1.72e-160 461
MS.gene009785.t1 AT2G30140 51.732 462 204 10 6 461 3 451 4.57e-156 451
MS.gene009785.t1 AT2G30140 51.515 462 204 10 6 461 3 450 1.33e-155 449
MS.gene009785.t1 AT2G28080 30.128 468 286 11 19 462 22 472 1.26e-63 214
MS.gene009785.t1 AT1G22400 30.629 493 282 16 15 466 13 486 3.33e-63 213
MS.gene009785.t1 AT1G05675 29.424 469 283 11 14 458 5 449 6.49e-63 211
MS.gene009785.t1 AT1G05680 29.638 469 282 11 14 458 5 449 9.90e-63 211
MS.gene009785.t1 AT2G36970 28.482 481 290 14 15 461 10 470 1.23e-62 211
MS.gene009785.t1 AT2G31750 30.882 476 275 15 14 462 7 455 4.64e-61 206
MS.gene009785.t1 AT1G78270 31.098 492 296 17 3 462 1 481 6.64e-61 207
MS.gene009785.t1 AT2G31750 30.882 476 275 15 14 462 7 455 1.20e-60 206
MS.gene009785.t1 AT1G22360 30.103 485 290 15 15 464 10 480 3.29e-60 204
MS.gene009785.t1 AT4G01070 29.684 475 281 13 13 454 6 460 5.49e-59 201
MS.gene009785.t1 AT1G22380 31.276 486 283 16 15 464 13 483 1.13e-58 201
MS.gene009785.t1 AT2G43840 30.000 470 276 15 15 461 7 446 1.42e-58 199
MS.gene009785.t1 AT2G43840 30.000 470 276 15 15 461 7 446 2.99e-58 199
MS.gene009785.t1 AT1G22340 30.266 489 281 17 15 462 13 482 8.53e-57 196
MS.gene009785.t1 AT2G43820 29.892 465 283 13 15 461 7 446 2.88e-55 191
MS.gene009785.t1 AT3G46660 29.362 470 283 13 11 458 10 452 3.86e-55 191
MS.gene009785.t1 AT4G15480 28.279 488 302 14 6 464 13 481 6.07e-55 191
MS.gene009785.t1 AT3G46670 29.310 464 289 12 11 458 5 445 7.23e-55 189
MS.gene009785.t1 AT1G22360 28.660 485 285 14 15 464 10 468 1.73e-54 189
MS.gene009785.t1 AT3G21560 27.235 481 302 16 9 458 6 469 2.37e-53 187
MS.gene009785.t1 AT5G38040 29.004 462 275 14 23 461 18 449 1.03e-52 184
MS.gene009785.t1 AT1G01420 29.752 484 268 17 13 454 9 462 1.15e-52 184
MS.gene009785.t1 AT1G01420 29.436 479 276 15 13 454 6 459 1.15e-52 184
MS.gene009785.t1 AT5G05900 31.635 471 269 15 16 463 9 449 4.21e-52 182
MS.gene009785.t1 AT1G22370 29.167 480 296 15 15 464 13 478 7.44e-52 182
MS.gene009785.t1 AT5G59580 28.664 464 289 12 15 461 9 447 7.85e-52 182
MS.gene009785.t1 AT4G15490 28.870 478 302 16 10 462 3 467 1.04e-51 182
MS.gene009785.t1 AT5G38010 28.387 465 292 10 16 461 11 453 1.12e-51 181
MS.gene009785.t1 AT2G31790 29.362 470 284 14 15 459 8 454 1.43e-51 181
MS.gene009785.t1 AT4G15550 28.455 492 294 13 3 458 1 470 1.80e-50 178
MS.gene009785.t1 AT4G15500 27.789 475 296 13 15 462 9 463 1.99e-50 178
MS.gene009785.t1 AT3G11340 29.032 465 283 12 16 462 10 445 2.66e-50 177
MS.gene009785.t1 AT2G23250 29.759 457 274 15 24 461 7 435 9.08e-50 176
MS.gene009785.t1 AT5G59590 27.409 467 294 11 14 461 9 449 1.17e-49 176
MS.gene009785.t1 AT1G05560 28.719 484 280 17 9 461 2 451 2.62e-48 172
MS.gene009785.t1 AT1G10400 28.964 473 281 17 14 454 6 455 3.50e-48 172
MS.gene009785.t1 AT2G36800 28.313 498 288 16 15 463 12 489 6.63e-48 172
MS.gene009785.t1 AT1G05560 28.719 484 280 17 9 461 52 501 7.29e-48 172
MS.gene009785.t1 AT2G36750 28.773 497 285 16 15 463 10 485 9.01e-48 172
MS.gene009785.t1 AT2G23260 27.766 461 304 14 14 461 9 453 1.16e-47 171
MS.gene009785.t1 AT3G46680 28.448 464 286 16 15 458 9 446 1.05e-46 168
MS.gene009785.t1 AT1G24100 26.708 483 295 13 9 461 5 458 1.63e-46 167
MS.gene009785.t1 AT5G05870 30.021 473 279 10 15 461 8 454 2.47e-46 167
MS.gene009785.t1 AT5G05880 29.424 469 279 13 16 461 9 448 5.31e-46 166
MS.gene009785.t1 AT3G46650 27.571 457 277 11 16 457 11 428 3.49e-45 163
MS.gene009785.t1 AT2G26480 27.015 459 302 10 16 462 9 446 1.17e-44 162
MS.gene009785.t1 AT2G36780 26.286 525 290 19 1 463 1 490 1.29e-44 163
MS.gene009785.t1 AT5G14860 28.131 487 297 16 12 461 5 475 7.74e-44 161
MS.gene009785.t1 AT3G46720 28.982 452 288 12 16 458 10 437 1.44e-43 159
MS.gene009785.t1 AT4G15280 25.152 493 304 11 15 463 4 475 1.46e-43 160
MS.gene009785.t1 AT4G15280 25.152 493 304 11 15 463 36 507 1.94e-43 160
MS.gene009785.t1 AT3G21800 26.294 483 306 12 16 461 6 475 2.32e-43 159
MS.gene009785.t1 AT3G46700 26.477 457 303 10 16 461 10 444 3.99e-43 158
MS.gene009785.t1 AT3G21790 25.806 496 298 15 15 461 4 478 4.28e-43 159
MS.gene009785.t1 AT1G05530 26.875 480 290 13 15 462 5 455 5.17e-43 158
MS.gene009785.t1 AT5G05890 28.602 472 283 11 16 461 9 452 8.34e-43 157
MS.gene009785.t1 AT2G16890 28.980 490 274 21 15 461 9 467 1.24e-42 157
MS.gene009785.t1 AT2G36790 27.733 494 303 16 11 463 9 489 1.47e-42 157
MS.gene009785.t1 AT3G21750 26.033 484 304 13 15 462 4 469 2.06e-42 157
MS.gene009785.t1 AT3G02100 28.416 461 296 14 15 458 13 456 3.37e-42 156
MS.gene009785.t1 AT1G01390 28.542 480 288 13 13 458 6 464 5.41e-42 155
MS.gene009785.t1 AT1G01390 28.542 480 288 13 13 458 23 481 1.05e-41 155
MS.gene009785.t1 AT3G21760 26.148 501 292 13 15 461 4 480 1.10e-41 155
MS.gene009785.t1 AT2G36770 26.969 508 295 18 10 466 11 493 1.56e-41 155
MS.gene009785.t1 AT2G36760 25.984 508 294 17 10 463 11 490 1.93e-41 154
MS.gene009785.t1 AT2G29740 28.016 489 290 15 14 461 7 474 4.76e-41 153
MS.gene009785.t1 AT3G21780 26.667 480 304 14 15 461 4 468 5.16e-41 153
MS.gene009785.t1 AT3G46690 27.851 456 291 15 15 454 9 442 5.39e-41 152
MS.gene009785.t1 AT5G05860 28.450 471 281 13 16 462 10 448 9.66e-41 152
MS.gene009785.t1 AT2G15480 26.923 494 295 19 15 458 10 487 1.22e-39 149
MS.gene009785.t1 AT3G55700 25.373 469 302 12 16 462 9 451 1.85e-39 148
MS.gene009785.t1 AT3G53160 26.547 501 298 20 15 466 8 487 1.96e-39 149
MS.gene009785.t1 AT3G53150 26.419 511 315 15 3 462 10 510 3.19e-39 149
MS.gene009785.t1 AT2G29730 25.767 489 294 16 14 462 4 463 3.61e-39 147
MS.gene009785.t1 AT2G15480 27.160 486 294 19 15 458 10 477 1.05e-38 147
MS.gene009785.t1 AT5G26310 25.462 487 289 17 12 454 4 460 1.06e-38 147
MS.gene009785.t1 AT3G55710 25.847 472 300 14 16 462 9 455 1.61e-38 145
MS.gene009785.t1 AT4G34131 27.510 498 286 20 10 458 5 476 2.05e-38 146
MS.gene009785.t1 AT2G15490 26.749 486 296 17 15 458 7 474 3.12e-38 145
MS.gene009785.t1 AT2G18570 27.629 485 276 13 15 454 5 459 1.45e-37 143
MS.gene009785.t1 AT2G29710 25.417 480 307 15 14 462 4 463 1.48e-37 143
MS.gene009785.t1 AT5G17050 24.116 481 316 14 7 463 3 458 1.60e-37 143
MS.gene009785.t1 AT2G15490 26.585 489 296 17 15 458 7 477 1.65e-37 143
MS.gene009785.t1 AT2G16890 28.989 445 245 19 15 417 9 424 2.08e-37 142
MS.gene009785.t1 AT2G29750 27.198 489 299 16 14 464 7 476 2.18e-37 143
MS.gene009785.t1 AT5G03490 28.270 474 279 19 7 452 14 454 2.23e-37 142
MS.gene009785.t1 AT1G07250 33.569 283 165 7 195 462 199 473 2.91e-37 142
MS.gene009785.t1 AT1G07260 30.000 370 228 10 112 464 119 474 5.44e-37 142
MS.gene009785.t1 AT4G15260 26.471 374 216 9 126 463 6 356 1.36e-36 138
MS.gene009785.t1 AT4G14090 25.806 465 299 15 15 458 13 452 1.45e-34 135
MS.gene009785.t1 AT3G50740 25.152 493 289 16 12 454 4 466 1.66e-34 135
MS.gene009785.t1 AT4G34138 27.088 491 287 17 7 451 3 468 7.18e-34 133
MS.gene009785.t1 AT5G17040 22.845 464 316 11 14 462 4 440 4.25e-33 130
MS.gene009785.t1 AT5G66690 25.358 489 287 16 12 454 4 460 5.80e-33 130
MS.gene009785.t1 AT1G73880 26.042 480 305 17 11 462 10 467 1.43e-32 129
MS.gene009785.t1 AT2G18560 28.389 391 226 12 96 454 1 369 2.81e-32 127
MS.gene009785.t1 AT5G12890 28.119 505 278 23 9 458 4 478 3.09e-32 129
MS.gene009785.t1 AT4G36770 25.820 488 259 18 15 444 4 446 3.57e-32 128
MS.gene009785.t1 AT1G07240 32.103 271 155 8 212 462 215 476 5.11e-31 125
MS.gene009785.t1 AT5G17030 23.431 478 322 15 7 463 3 457 7.94e-31 124
MS.gene009785.t1 AT5G37950 26.687 326 216 7 61 371 26 343 8.11e-31 122
MS.gene009785.t1 AT1G30530 23.629 474 312 16 10 462 7 451 9.51e-31 124
MS.gene009785.t1 AT1G22370 28.435 313 192 9 172 464 8 308 4.23e-30 119
MS.gene009785.t1 AT5G37950 26.444 329 207 7 61 371 26 337 7.60e-30 119
MS.gene009785.t1 AT4G01070 29.154 319 199 9 13 320 6 308 8.83e-30 119
MS.gene009785.t1 AT4G34135 26.122 490 294 15 15 458 11 478 1.41e-29 121
MS.gene009785.t1 AT3G16520 26.371 474 295 15 16 458 6 456 1.69e-29 120
MS.gene009785.t1 AT5G65550 23.476 443 296 13 10 426 4 429 1.82e-29 120
MS.gene009785.t1 AT3G22250 24.896 482 299 15 16 463 9 461 1.73e-28 117
MS.gene009785.t1 AT5G17040 27.243 301 194 7 172 462 53 338 1.22e-27 113
MS.gene009785.t1 AT3G16520 28.117 409 247 13 16 393 6 398 2.45e-27 114
MS.gene009785.t1 AT3G16520 28.117 409 247 13 16 393 6 398 2.96e-27 114
MS.gene009785.t1 AT5G49690 24.324 444 297 14 15 439 10 433 1.89e-26 112
MS.gene009785.t1 AT1G51210 24.672 458 287 19 6 436 6 432 2.23e-26 111
MS.gene009785.t1 AT1G06000 23.838 495 267 18 12 461 4 433 3.23e-21 96.3
MS.gene009785.t1 AT2G22590 21.616 458 308 16 12 439 12 448 1.10e-20 94.7
MS.gene009785.t1 AT3G29630 22.706 436 277 15 15 417 6 414 2.30e-15 78.6
MS.gene009785.t1 AT5G53990 21.749 446 296 15 15 439 6 419 2.51e-15 78.6
MS.gene009785.t1 AT1G64910 23.423 444 265 17 13 417 4 411 2.10e-14 75.5
MS.gene009785.t1 AT5G54010 22.273 440 292 16 15 432 6 417 6.11e-14 73.9
MS.gene009785.t1 AT4G09500 20.270 444 305 13 15 439 6 419 6.18e-12 67.8
MS.gene009785.t1 AT4G27570 21.510 437 283 16 15 417 7 417 9.67e-12 67.4
MS.gene009785.t1 AT4G27560 21.591 440 279 16 15 417 7 417 1.86e-11 66.2
MS.gene009785.t1 AT5G54060 23.318 446 289 16 12 420 10 439 2.71e-11 65.9
MS.gene009785.t1 AT2G22930 23.111 225 152 5 225 438 204 418 4.76e-11 65.1

Find 127 sgRNAs with CRISPR-Local

Find 166 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACAGGAACATTTCTCTTAT+TGG 0.153236 5.3:-57514370 None:intergenic
CAATTGCACGTTGACATATT+TGG 0.193573 5.3:-57515750 None:intergenic
CATTACCCGGTAAATGTTTC+AGG 0.194155 5.3:+57514465 MS.gene009785:CDS
TAGGCTTGTTAGAAGATTTA+TGG 0.205219 5.3:+57515675 MS.gene009785:CDS
TACATGATAGCTATTTGTTT+TGG 0.213058 5.3:+57514334 MS.gene009785:CDS
TTGAACTTGATTATATAAAT+TGG 0.214972 5.3:+57515236 MS.gene009785:CDS
TGAAGCTGTTATGACTAAAA+TGG 0.236354 5.3:+57514257 MS.gene009785:CDS
AATGGTTGGTCCATCATTAT+TGG 0.246488 5.3:-57515559 None:intergenic
TTGATGTTGTTGTTTGGTTT+TGG 0.265612 5.3:-57514168 None:intergenic
AAAGATATTTGTGGGGAAAA+AGG 0.278339 5.3:+57515409 MS.gene009785:CDS
GTGGTTGGTGGAGAAGGATT+TGG 0.303447 5.3:-57513997 None:intergenic
CAATATATTACTCTATTGTT+TGG 0.309306 5.3:-57515833 None:intergenic
GTAGGTCCAATTGTGTAAAT+TGG 0.309840 5.3:-57515160 None:intergenic
TTGAGGCTCAATTTCATATA+TGG 0.312256 5.3:-57515104 None:intergenic
AACAAGGATGTTGGGGTTGT+TGG 0.318935 5.3:-57514097 None:intergenic
TCTATACCAATTTACACAAT+TGG 0.329382 5.3:+57515154 MS.gene009785:CDS
ATCTTTGCCTCGACCTTCTT+CGG 0.344761 5.3:-57514220 None:intergenic
TGTTAGAAGATTTATGGATT+TGG 0.355476 5.3:+57515681 MS.gene009785:CDS
AAACGTGTGGATTACATTCC+GGG 0.361089 5.3:+57514956 MS.gene009785:CDS
ATTTGGCCGTGACTAAAATA+AGG 0.365609 5.3:-57515187 None:intergenic
CAAACGTGTGGATTACATTC+CGG 0.374925 5.3:+57514955 MS.gene009785:CDS
ATGTTCCTGTTGCGTCGTTT+TGG 0.382125 5.3:+57514382 MS.gene009785:CDS
TATAATCAAGTTCAACATCT+TGG 0.382409 5.3:-57515228 None:intergenic
GCGAATTTGATGTTGTTGTT+TGG 0.382887 5.3:-57514174 None:intergenic
TGGTGCTTAGAGAGGCAATT+TGG 0.392268 5.3:-57515204 None:intergenic
TGGGTGGTGGTTGGTGGAGA+AGG 0.394153 5.3:-57514003 None:intergenic
TGCTTTCTTCATCCATGGTA+TGG 0.395710 5.3:-57515062 None:intergenic
TCTTAAACATTATCGTCGTT+TGG 0.398240 5.3:+57514431 MS.gene009785:CDS
ATAGTTGAGGATTGGAAAGT+TGG 0.399566 5.3:+57515595 MS.gene009785:CDS
ACTATATATTTACTATTCAA+TGG 0.405664 5.3:-57515577 None:intergenic
AACTAACCTGAAACATTTAC+CGG 0.406297 5.3:-57514471 None:intergenic
ACTATGTGGGTGGTGGTTGG+TGG 0.411133 5.3:-57514009 None:intergenic
ATAGGCCAAAACGACGCAAC+AGG 0.417767 5.3:-57514387 None:intergenic
ACAAAGGTAACAAGGATGTT+GGG 0.417990 5.3:-57514105 None:intergenic
CATCATGAAGTGGAAAATCT+TGG 0.420380 5.3:-57514997 None:intergenic
TCTTACCTCTCCAATAATGA+TGG 0.427830 5.3:+57515549 MS.gene009785:CDS
GAATCAAGTAGTTTCTCAAA+TGG 0.433865 5.3:-57514285 None:intergenic
CCTTTGTTGTCACGGAAGAA+TGG 0.441073 5.3:+57514121 MS.gene009785:CDS
TAGTTGAGGATTGGAAAGTT+GGG 0.447378 5.3:+57515596 MS.gene009785:CDS
TGGTGGGTCGGAGTTGATGA+TGG 0.447434 5.3:-57514148 None:intergenic
AACGTTATTCCCTCCGAAGA+AGG 0.450034 5.3:+57514207 MS.gene009785:CDS
CTAAGTGGAAAGATATTTGT+GGG 0.454247 5.3:+57515401 MS.gene009785:CDS
GGGTTGATGTGGCCTCGACC+TGG 0.457192 5.3:-57514045 None:intergenic
GTTTGCATAGGTTCATCATT+GGG 0.458429 5.3:-57514065 None:intergenic
AATCAAGTAGTTTCTCAAAT+GGG 0.466238 5.3:-57514284 None:intergenic
GAGCTAATTCTAACAATCTA+CGG 0.466397 5.3:-57515033 None:intergenic
TTTCTTGGTAATATATTACA+TGG 0.470876 5.3:+57515808 MS.gene009785:CDS
AGTTTGCATAGGTTCATCAT+TGG 0.473753 5.3:-57514066 None:intergenic
GGGAATAACGTTTGCGATGG+TGG 0.475066 5.3:-57514196 None:intergenic
GTTGGTGGAGAAGGATTTGG+AGG 0.476078 5.3:-57513994 None:intergenic
TATGCATCAACACTCTCAAT+TGG 0.478373 5.3:-57515453 None:intergenic
GTAAATATATAGTTGAGGAT+TGG 0.484188 5.3:+57515587 MS.gene009785:CDS
TATATTTACTATTCAATGGT+TGG 0.484708 5.3:-57515573 None:intergenic
TGGGTGGAGGGTGGAAAAGA+AGG 0.488266 5.3:+57515615 MS.gene009785:CDS
AGGATTGGAAAGTTGGGTGG+AGG 0.494686 5.3:+57515602 MS.gene009785:CDS
GGATTGGAAAGTTGGGTGGA+GGG 0.500664 5.3:+57515603 MS.gene009785:CDS
ATTATTGGAGAGGTAAGAAA+AGG 0.507093 5.3:-57515544 None:intergenic
TATTGTGCTTTCTTCATCCA+TGG 0.508332 5.3:-57515067 None:intergenic
AACAAAGGTAACAAGGATGT+TGG 0.510094 5.3:-57514106 None:intergenic
AGAAGGATTTGGAGGTTCCA+TGG 0.511869 5.3:-57513986 None:intergenic
TCTAAGTGGAAAGATATTTG+TGG 0.514263 5.3:+57515400 MS.gene009785:CDS
TTGGAAAGTTGGGTGGAGGG+TGG 0.517790 5.3:+57515606 MS.gene009785:CDS
AGACGAATTGATGAGTTCCC+CGG 0.518887 5.3:-57514974 None:intergenic
GCTACTATGTGGGTGGTGGT+TGG 0.524247 5.3:-57514012 None:intergenic
ATCAAGTTCAACATCTTGGT+TGG 0.524790 5.3:-57515224 None:intergenic
TGTTGGGGTTGTTGGAGATG+AGG 0.528028 5.3:-57514089 None:intergenic
GTGTTGATGCATAGTGCTAT+AGG 0.529886 5.3:+57515463 MS.gene009785:CDS
ATGTGGCCTCGACCTGGGTA+TGG 0.530456 5.3:-57514039 None:intergenic
CTCAAAACATCAATTGCTTG+AGG 0.534158 5.3:-57515121 None:intergenic
AGCTAATTCTAACAATCTAC+GGG 0.535491 5.3:-57515032 None:intergenic
GGTTCATCATTGGGTTGATG+TGG 0.536548 5.3:-57514056 None:intergenic
TGGCTAGATAATCAACCCAT+TGG 0.537035 5.3:+57515256 MS.gene009785:CDS
CTTTAACATCACCATGTCCA+TGG 0.540884 5.3:+57513969 None:intergenic
TTGCCTCGACCTTCTTCGGA+GGG 0.545928 5.3:-57514216 None:intergenic
CAAATCAATGAAATTGCGAA+TGG 0.547383 5.3:+57515328 MS.gene009785:CDS
GGGTGGAATTCAACAAGAGA+AGG 0.548966 5.3:+57515505 MS.gene009785:CDS
TGACTAAAATAAGGTATGGT+AGG 0.550916 5.3:-57515178 None:intergenic
ATGATGAAGTGAAGGAAATG+AGG 0.551360 5.3:+57515707 MS.gene009785:CDS
CCTTGTTACCTTTGTTGTCA+CGG 0.554764 5.3:+57514113 MS.gene009785:CDS
TAAGAAGAGATGAAATTGCT+AGG 0.556457 5.3:+57515656 MS.gene009785:CDS
GGTATGGTACGGCTACTATG+TGG 0.556856 5.3:-57514023 None:intergenic
GGCTCAATTTCATATATGGA+AGG 0.559502 5.3:-57515100 None:intergenic
GCCGTGACTAAAATAAGGTA+TGG 0.560100 5.3:-57515182 None:intergenic
ATTTGGAGGTTCCATGGACA+TGG 0.560712 5.3:-57513980 None:intergenic
GACATATAGAACAGAACCAA+TGG 0.564420 5.3:-57515272 None:intergenic
ACATATAGAACAGAACCAAT+GGG 0.568120 5.3:-57515271 None:intergenic
TTGAGGATTGGAAAGTTGGG+TGG 0.569689 5.3:+57515599 MS.gene009785:CDS
TGGAGATGAGGAGTTTGCAT+AGG 0.577125 5.3:-57514077 None:intergenic
GTATGGTACGGCTACTATGT+GGG 0.579099 5.3:-57514022 None:intergenic
ATCTTGGTTGGTGCTTAGAG+AGG 0.582916 5.3:-57515212 None:intergenic
GCGAATGGTTTGCGCGAAAG+TGG 0.587045 5.3:+57515343 MS.gene009785:CDS
CAACGTGCAATTGCAAGTGG+AGG 0.589211 5.3:+57515760 MS.gene009785:CDS
CAAAGGTAACAAGGATGTTG+GGG 0.590706 5.3:-57514104 None:intergenic
TAAACATTATCGTCGTTTGG+AGG 0.591585 5.3:+57514434 MS.gene009785:CDS
CTATCATGTATAATCACACT+CGG 0.591952 5.3:-57514321 None:intergenic
GGTTGATGTGGCCTCGACCT+GGG 0.592829 5.3:-57514044 None:intergenic
TACGGCTACTATGTGGGTGG+TGG 0.593788 5.3:-57514016 None:intergenic
ATTCCCTCCGAAGAAGGTCG+AGG 0.594862 5.3:+57514213 MS.gene009785:CDS
CCGTGACAACAAAGGTAACA+AGG 0.601448 5.3:-57514113 None:intergenic
CGTAAGCTCGCATCATGAAG+TGG 0.601654 5.3:-57515007 None:intergenic
TTTGCCTCGACCTTCTTCGG+AGG 0.601667 5.3:-57514217 None:intergenic
GGAGGGAATAACGTTTGCGA+TGG 0.602303 5.3:-57514199 None:intergenic
GCCTCGACCTGGGTATGGTA+CGG 0.604546 5.3:-57514034 None:intergenic
GCCGTACCATACCCAGGTCG+AGG 0.605968 5.3:+57514033 MS.gene009785:CDS
GCTCAATTTCATATATGGAA+GGG 0.606891 5.3:-57515099 None:intergenic
TCTGTTCTATATGTCTCACA+AGG 0.608612 5.3:+57515280 MS.gene009785:CDS
GAATAGTAAATATATAGTTG+AGG 0.608954 5.3:+57515582 MS.gene009785:CDS
CCATTCTTCCGTGACAACAA+AGG 0.612347 5.3:-57514121 None:intergenic
TTGGTCCATCATTATTGGAG+AGG 0.620610 5.3:-57515554 None:intergenic
TATCGTCGTTTGGAGGAACA+TGG 0.621006 5.3:+57514441 MS.gene009785:CDS
GGAGGAACATGGTCATTACC+CGG 0.623039 5.3:+57514452 MS.gene009785:CDS
AACGTGCAATTGCAAGTGGA+GGG 0.623769 5.3:+57515761 MS.gene009785:CDS
AACGTGTGGATTACATTCCG+GGG 0.625241 5.3:+57514957 MS.gene009785:CDS
TGCGTGGAGAAAGTTCTAAG+TGG 0.625771 5.3:+57515386 MS.gene009785:CDS
TGTCAACGTGCAATTGCAAG+TGG 0.626244 5.3:+57515757 MS.gene009785:CDS
TTTGGAAGATGATGAAGTGA+AGG 0.627399 5.3:+57515699 MS.gene009785:CDS
TAGCTCTCAATACCATACCA+TGG 0.643975 5.3:+57515050 MS.gene009785:CDS
TGGTACGGCTACTATGTGGG+TGG 0.662770 5.3:-57514019 None:intergenic
ATAGTAGCCGTACCATACCC+AGG 0.666075 5.3:+57514027 MS.gene009785:CDS
AAAGTGGTGTTAGATTCTTG+TGG 0.666670 5.3:+57515359 MS.gene009785:CDS
AGAAGTTGGTGACAAACGTG+TGG 0.670943 5.3:+57514943 MS.gene009785:intron
TAAGTGGAAAGATATTTGTG+GGG 0.677407 5.3:+57515402 MS.gene009785:CDS
AGATTCTTGTGGATAATGCG+TGG 0.682535 5.3:+57515370 MS.gene009785:CDS
ACTCTCAATTGGTCACACCA+TGG 0.684804 5.3:-57515442 None:intergenic
ACTAACCTGAAACATTTACC+GGG 0.686216 5.3:-57514470 None:intergenic
TTGATGCATAGTGCTATAGG+TGG 0.705531 5.3:+57515466 MS.gene009785:CDS
CTGTTCTATATGTCTCACAA+GGG 0.733356 5.3:+57515281 MS.gene009785:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACTATATATTTACTATTCAA+TGG - chr5.3:57515580-57515599 None:intergenic 15.0%
!! TTGAACTTGATTATATAAAT+TGG + chr5.3:57515236-57515255 MS.gene009785:CDS 15.0%
!!! AAAAGCTTTCAAATTATTTT+CGG - chr5.3:57515791-57515810 None:intergenic 15.0%
!! CTAAAAAATGCAAGTAAAAT+GGG - chr5.3:57514630-57514649 None:intergenic 20.0%
!! GAATAGTAAATATATAGTTG+AGG + chr5.3:57515582-57515601 MS.gene009785:CDS 20.0%
!! TAATACGAGAAAAAAATAGA+TGG - chr5.3:57514774-57514793 None:intergenic 20.0%
!! TATATTTACTATTCAATGGT+TGG - chr5.3:57515576-57515595 None:intergenic 20.0%
!! TTAGGAAAATTTCAAAAACT+TGG + chr5.3:57514646-57514665 MS.gene009785:intron 20.0%
!!! AATAATTTGAAAGCTTTTCT+TGG + chr5.3:57515793-57515812 MS.gene009785:CDS 20.0%
!!! TATTATTTTTAATCATGTGG+CGG + chr5.3:57514809-57514828 MS.gene009785:intron 20.0%
!!! TGGTATTATTTTTAATCATG+TGG + chr5.3:57514806-57514825 MS.gene009785:intron 20.0%
!!! TTTCTTGGTAATATATTACA+TGG + chr5.3:57515808-57515827 MS.gene009785:CDS 20.0%
! AATCAAGTAGTTTCTCAAAT+GGG - chr5.3:57514287-57514306 None:intergenic 25.0%
! CCTAAAAAATGCAAGTAAAA+TGG - chr5.3:57514631-57514650 None:intergenic 25.0%
! GTAAATATATAGTTGAGGAT+TGG + chr5.3:57515587-57515606 MS.gene009785:CDS 25.0%
! TATAATCAAGTTCAACATCT+TGG - chr5.3:57515231-57515250 None:intergenic 25.0%
! TATTTATGATTTAGCTACCT+GGG + chr5.3:57514569-57514588 MS.gene009785:intron 25.0%
! TCTATACCAATTTACACAAT+TGG + chr5.3:57515154-57515173 MS.gene009785:CDS 25.0%
! TGTTAGAAGATTTATGGATT+TGG + chr5.3:57515681-57515700 MS.gene009785:CDS 25.0%
! TTATTTATGATTTAGCTACC+TGG + chr5.3:57514568-57514587 MS.gene009785:intron 25.0%
!! AGTGTTTTCTTTCTTTCTAA+AGG - chr5.3:57514601-57514620 None:intergenic 25.0%
!! TACATGATAGCTATTTGTTT+TGG + chr5.3:57514334-57514353 MS.gene009785:CDS 25.0%
!! TAGTTTATGGACTAAATCAA+TGG + chr5.3:57514731-57514750 MS.gene009785:intron 25.0%
!!! ACATGATAGCTATTTGTTTT+GGG + chr5.3:57514335-57514354 MS.gene009785:CDS 25.0%
!!! ATGTGAAAATCGTGTTTTTT+TGG - chr5.3:57514866-57514885 None:intergenic 25.0%
!!! CCATTTTACTTGCATTTTTT+AGG + chr5.3:57514628-57514647 MS.gene009785:intron 25.0%
!!! TAAATGTTTTTTCTCTGAAG+TGG - chr5.3:57514551-57514570 None:intergenic 25.0%
AAAGATATTTGTGGGGAAAA+AGG + chr5.3:57515409-57515428 MS.gene009785:CDS 30.0%
AACAGGAACATTTCTCTTAT+TGG - chr5.3:57514373-57514392 None:intergenic 30.0%
AACTAACCTGAAACATTTAC+CGG - chr5.3:57514474-57514493 None:intergenic 30.0%
AACTATACCTCTCTCTAATT+CGG - chr5.3:57514716-57514735 None:intergenic 30.0%
AAGATATTTGTGGGGAAAAA+GGG + chr5.3:57515410-57515429 MS.gene009785:CDS 30.0%
ACATATAGAACAGAACCAAT+GGG - chr5.3:57515274-57515293 None:intergenic 30.0%
AGCTAATTCTAACAATCTAC+GGG - chr5.3:57515035-57515054 None:intergenic 30.0%
ATTATTGGAGAGGTAAGAAA+AGG - chr5.3:57515547-57515566 None:intergenic 30.0%
CAAATCAATGAAATTGCGAA+TGG + chr5.3:57515328-57515347 MS.gene009785:CDS 30.0%
CTAAGTGGAAAGATATTTGT+GGG + chr5.3:57515401-57515420 MS.gene009785:CDS 30.0%
CTATCATGTATAATCACACT+CGG - chr5.3:57514324-57514343 None:intergenic 30.0%
GAATCAAGTAGTTTCTCAAA+TGG - chr5.3:57514288-57514307 None:intergenic 30.0%
GAGCTAATTCTAACAATCTA+CGG - chr5.3:57515036-57515055 None:intergenic 30.0%
GCTCAATTTCATATATGGAA+GGG - chr5.3:57515102-57515121 None:intergenic 30.0%
TAAGAAGAGATGAAATTGCT+AGG + chr5.3:57515656-57515675 MS.gene009785:CDS 30.0%
TAAGTGGAAAGATATTTGTG+GGG + chr5.3:57515402-57515421 MS.gene009785:CDS 30.0%
TCTAAGTGGAAAGATATTTG+TGG + chr5.3:57515400-57515419 MS.gene009785:CDS 30.0%
TCTTAAACATTATCGTCGTT+TGG + chr5.3:57514431-57514450 MS.gene009785:CDS 30.0%
TGAAGCTGTTATGACTAAAA+TGG + chr5.3:57514257-57514276 MS.gene009785:CDS 30.0%
TGACTAAAATAAGGTATGGT+AGG - chr5.3:57515181-57515200 None:intergenic 30.0%
TTGAGGCTCAATTTCATATA+TGG - chr5.3:57515107-57515126 None:intergenic 30.0%
TTTCTCGTATTAATCAGTTG+AGG + chr5.3:57514782-57514801 MS.gene009785:intron 30.0%
! TTAGAGAGAGGTATAGTTTA+TGG + chr5.3:57514718-57514737 MS.gene009785:intron 30.0%
!! TAGGCTTGTTAGAAGATTTA+TGG + chr5.3:57515675-57515694 MS.gene009785:CDS 30.0%
!!! ACCATACCTTATTTTAGTCA+CGG + chr5.3:57515181-57515200 MS.gene009785:CDS 30.0%
!!! TTGATGTTGTTGTTTGGTTT+TGG - chr5.3:57514171-57514190 None:intergenic 30.0%
AAAAACTTGGTATGCTTCAG+GGG + chr5.3:57514659-57514678 MS.gene009785:intron 35.0%
AACAAAGGTAACAAGGATGT+TGG - chr5.3:57514109-57514128 None:intergenic 35.0%
ACAAAGGTAACAAGGATGTT+GGG - chr5.3:57514108-57514127 None:intergenic 35.0%
ACTAACCTGAAACATTTACC+GGG - chr5.3:57514473-57514492 None:intergenic 35.0%
AGTTTGCATAGGTTCATCAT+TGG - chr5.3:57514069-57514088 None:intergenic 35.0%
ATAGTTGAGGATTGGAAAGT+TGG + chr5.3:57515595-57515614 MS.gene009785:CDS 35.0%
ATCAAGTTCAACATCTTGGT+TGG - chr5.3:57515227-57515246 None:intergenic 35.0%
ATGATGAAGTGAAGGAAATG+AGG + chr5.3:57515707-57515726 MS.gene009785:CDS 35.0%
ATTTGGCCGTGACTAAAATA+AGG - chr5.3:57515190-57515209 None:intergenic 35.0%
CAAAAACTTGGTATGCTTCA+GGG + chr5.3:57514658-57514677 MS.gene009785:intron 35.0%
CAATTGCACGTTGACATATT+TGG - chr5.3:57515753-57515772 None:intergenic 35.0%
CATCATGAAGTGGAAAATCT+TGG - chr5.3:57515000-57515019 None:intergenic 35.0%
CTCAAAACATCAATTGCTTG+AGG - chr5.3:57515124-57515143 None:intergenic 35.0%
CTGTTCTATATGTCTCACAA+GGG + chr5.3:57515281-57515300 MS.gene009785:CDS 35.0%
GACATATAGAACAGAACCAA+TGG - chr5.3:57515275-57515294 None:intergenic 35.0%
GGCTCAATTTCATATATGGA+AGG - chr5.3:57515103-57515122 None:intergenic 35.0%
GTAGGTCCAATTGTGTAAAT+TGG - chr5.3:57515163-57515182 None:intergenic 35.0%
GTTTGCATAGGTTCATCATT+GGG - chr5.3:57514068-57514087 None:intergenic 35.0%
TAAAATGCTGCAACAGAAGT+TGG + chr5.3:57514929-57514948 MS.gene009785:intron 35.0%
TAAACATTATCGTCGTTTGG+AGG + chr5.3:57514434-57514453 MS.gene009785:CDS 35.0%
TAGTTGAGGATTGGAAAGTT+GGG + chr5.3:57515596-57515615 MS.gene009785:CDS 35.0%
TATGCATCAACACTCTCAAT+TGG - chr5.3:57515456-57515475 None:intergenic 35.0%
TATTGTGCTTTCTTCATCCA+TGG - chr5.3:57515070-57515089 None:intergenic 35.0%
TCAAAAACTTGGTATGCTTC+AGG + chr5.3:57514657-57514676 MS.gene009785:intron 35.0%
TCGTATTAATCAGTTGAGGT+TGG + chr5.3:57514786-57514805 MS.gene009785:intron 35.0%
TCTGTTCTATATGTCTCACA+AGG + chr5.3:57515280-57515299 MS.gene009785:CDS 35.0%
TCTTACCTCTCCAATAATGA+TGG + chr5.3:57515549-57515568 MS.gene009785:CDS 35.0%
TTTGGAAGATGATGAAGTGA+AGG + chr5.3:57515699-57515718 MS.gene009785:CDS 35.0%
! AAAGTGGTGTTAGATTCTTG+TGG + chr5.3:57515359-57515378 MS.gene009785:CDS 35.0%
! AATGGTTGGTCCATCATTAT+TGG - chr5.3:57515562-57515581 None:intergenic 35.0%
! ATAGTGCTATAGGTGGTTTT+TGG + chr5.3:57515473-57515492 MS.gene009785:CDS 35.0%
! CTTTCTAAAGGAATATTCCC+AGG - chr5.3:57514589-57514608 None:intergenic 35.0%
! GCGAATTTGATGTTGTTGTT+TGG - chr5.3:57514177-57514196 None:intergenic 35.0%
!!! AAAAAGGGTTTGTTTTGCCA+TGG + chr5.3:57515425-57515444 MS.gene009785:CDS 35.0%
!!! ACAAGAGAAGGTTTGTTTTG+TGG + chr5.3:57515517-57515536 MS.gene009785:CDS 35.0%
!!! ATGTTGTTGTTTGGTTTTGG+TGG - chr5.3:57514168-57514187 None:intergenic 35.0%
!!! TGTTGTTGTTTGGTTTTGGT+GGG - chr5.3:57514167-57514186 None:intergenic 35.0%
AGATTCTTGTGGATAATGCG+TGG + chr5.3:57515370-57515389 MS.gene009785:CDS 40.0%
CAAAGGTAACAAGGATGTTG+GGG - chr5.3:57514107-57514126 None:intergenic 40.0%
CATTACCCGGTAAATGTTTC+AGG + chr5.3:57514465-57514484 MS.gene009785:CDS 40.0%
GCCGTGACTAAAATAAGGTA+TGG - chr5.3:57515185-57515204 None:intergenic 40.0%
TAGCTCTCAATACCATACCA+TGG + chr5.3:57515050-57515069 MS.gene009785:CDS 40.0%
TGCTTTCTTCATCCATGGTA+TGG - chr5.3:57515065-57515084 None:intergenic 40.0%
TGGCTAGATAATCAACCCAT+TGG + chr5.3:57515256-57515275 MS.gene009785:CDS 40.0%
TTAGGAACCGAATTAGAGAG+AGG + chr5.3:57514706-57514725 MS.gene009785:intron 40.0%
TTGATGCATAGTGCTATAGG+TGG + chr5.3:57515466-57515485 MS.gene009785:CDS 40.0%
TTGGTCCATCATTATTGGAG+AGG - chr5.3:57515557-57515576 None:intergenic 40.0%
! AAACGTGTGGATTACATTCC+GGG + chr5.3:57514956-57514975 MS.gene009785:CDS 40.0%
! CAAACGTGTGGATTACATTC+CGG + chr5.3:57514955-57514974 MS.gene009785:CDS 40.0%
! CCTTGTTACCTTTGTTGTCA+CGG + chr5.3:57514113-57514132 MS.gene009785:CDS 40.0%
! CTCACAAGGGAGTTTTCTTT+CGG + chr5.3:57515294-57515313 MS.gene009785:CDS 40.0%
! GTGTTGATGCATAGTGCTAT+AGG + chr5.3:57515463-57515482 MS.gene009785:CDS 40.0%
!!! GTGGTTTTTGGTCACATTGT+GGG + chr5.3:57515485-57515504 MS.gene009785:CDS 40.0%
AACAAGGATGTTGGGGTTGT+TGG - chr5.3:57514100-57514119 None:intergenic 45.0%
AACGTGCAATTGCAAGTGGA+GGG + chr5.3:57515761-57515780 MS.gene009785:CDS 45.0%
AACGTTATTCCCTCCGAAGA+AGG + chr5.3:57514207-57514226 MS.gene009785:CDS 45.0%
ACTCTCAATTGGTCACACCA+TGG - chr5.3:57515445-57515464 None:intergenic 45.0%
AGAAAAAACGACGCCGACAT+AGG - chr5.3:57514408-57514427 None:intergenic 45.0%
AGAAGGATTTGGAGGTTCCA+TGG - chr5.3:57513989-57514008 None:intergenic 45.0%
AGACGAATTGATGAGTTCCC+CGG - chr5.3:57514977-57514996 None:intergenic 45.0%
ATCTTTGCCTCGACCTTCTT+CGG - chr5.3:57514223-57514242 None:intergenic 45.0%
CCATTCTTCCGTGACAACAA+AGG - chr5.3:57514124-57514143 None:intergenic 45.0%
CCGTGACAACAAAGGTAACA+AGG - chr5.3:57514116-57514135 None:intergenic 45.0%
GGGTGGAATTCAACAAGAGA+AGG + chr5.3:57515505-57515524 MS.gene009785:CDS 45.0%
GTATGGTACGGCTACTATGT+GGG - chr5.3:57514025-57514044 None:intergenic 45.0%
TATCGTCGTTTGGAGGAACA+TGG + chr5.3:57514441-57514460 MS.gene009785:CDS 45.0%
TGGAGATGAGGAGTTTGCAT+AGG - chr5.3:57514080-57514099 None:intergenic 45.0%
TGGTGCTTAGAGAGGCAATT+TGG - chr5.3:57515207-57515226 None:intergenic 45.0%
TGTCAACGTGCAATTGCAAG+TGG + chr5.3:57515757-57515776 MS.gene009785:CDS 45.0%
TTGAGGATTGGAAAGTTGGG+TGG + chr5.3:57515599-57515618 MS.gene009785:CDS 45.0%
! AACGTGTGGATTACATTCCG+GGG + chr5.3:57514957-57514976 MS.gene009785:CDS 45.0%
! ATCTTGGTTGGTGCTTAGAG+AGG - chr5.3:57515215-57515234 None:intergenic 45.0%
! ATGTTCCTGTTGCGTCGTTT+TGG + chr5.3:57514382-57514401 MS.gene009785:CDS 45.0%
! CCTTTGTTGTCACGGAAGAA+TGG + chr5.3:57514121-57514140 MS.gene009785:CDS 45.0%
!! AGAAGTTGGTGACAAACGTG+TGG + chr5.3:57514943-57514962 MS.gene009785:intron 45.0%
!! GGTTCATCATTGGGTTGATG+TGG - chr5.3:57514059-57514078 None:intergenic 45.0%
!! TGCGTGGAGAAAGTTCTAAG+TGG + chr5.3:57515386-57515405 MS.gene009785:CDS 45.0%
!!! GGTGGTTTTTGGTCACATTG+TGG + chr5.3:57515484-57515503 MS.gene009785:CDS 45.0%
!!! GTTGTTTGGTTTTGGTGGGT+CGG - chr5.3:57514163-57514182 None:intergenic 45.0%
!!! GTTTTTGGTCACATTGTGGG+TGG + chr5.3:57515488-57515507 MS.gene009785:CDS 45.0%
!! ATTATATTGATATATAATTT+AGG + chr5.3:57514688-57514707 MS.gene009785:intron 5.0%
!!! TTTTTTTTTTACTAAATTTA+AGG + chr5.3:57514508-57514527 MS.gene009785:intron 5.0%
AGGATTGGAAAGTTGGGTGG+AGG + chr5.3:57515602-57515621 MS.gene009785:CDS 50.0%
ATAGGCCAAAACGACGCAAC+AGG - chr5.3:57514390-57514409 None:intergenic 50.0%
ATAGTAGCCGTACCATACCC+AGG + chr5.3:57514027-57514046 MS.gene009785:CDS 50.0%
CAACGTGCAATTGCAAGTGG+AGG + chr5.3:57515760-57515779 MS.gene009785:CDS 50.0%
CGTAAGCTCGCATCATGAAG+TGG - chr5.3:57515010-57515029 None:intergenic 50.0%
GGAGGAACATGGTCATTACC+CGG + chr5.3:57514452-57514471 MS.gene009785:CDS 50.0%
GGAGGGAATAACGTTTGCGA+TGG - chr5.3:57514202-57514221 None:intergenic 50.0%
GGATTGGAAAGTTGGGTGGA+GGG + chr5.3:57515603-57515622 MS.gene009785:CDS 50.0%
GGGAATAACGTTTGCGATGG+TGG - chr5.3:57514199-57514218 None:intergenic 50.0%
GGTATGGTACGGCTACTATG+TGG - chr5.3:57514026-57514045 None:intergenic 50.0%
TGTTGGGGTTGTTGGAGATG+AGG - chr5.3:57514092-57514111 None:intergenic 50.0%
! GTTGGTGGAGAAGGATTTGG+AGG - chr5.3:57513997-57514016 None:intergenic 50.0%
!! GTGGTTGGTGGAGAAGGATT+TGG - chr5.3:57514000-57514019 None:intergenic 50.0%
!! TGCGTCGTTTTGGCCTATGT+CGG + chr5.3:57514392-57514411 MS.gene009785:CDS 50.0%
ATTCCCTCCGAAGAAGGTCG+AGG + chr5.3:57514213-57514232 MS.gene009785:CDS 55.0%
TACGGCTACTATGTGGGTGG+TGG - chr5.3:57514019-57514038 None:intergenic 55.0%
TGGGTGGAGGGTGGAAAAGA+AGG + chr5.3:57515615-57515634 MS.gene009785:CDS 55.0%
TGGTACGGCTACTATGTGGG+TGG - chr5.3:57514022-57514041 None:intergenic 55.0%
TTGCCTCGACCTTCTTCGGA+GGG - chr5.3:57514219-57514238 None:intergenic 55.0%
TTGGAAAGTTGGGTGGAGGG+TGG + chr5.3:57515606-57515625 MS.gene009785:CDS 55.0%
TTTGCCTCGACCTTCTTCGG+AGG - chr5.3:57514220-57514239 None:intergenic 55.0%
! ACTATGTGGGTGGTGGTTGG+TGG - chr5.3:57514012-57514031 None:intergenic 55.0%
! GCGAATGGTTTGCGCGAAAG+TGG + chr5.3:57515343-57515362 MS.gene009785:CDS 55.0%
! GCTACTATGTGGGTGGTGGT+TGG - chr5.3:57514015-57514034 None:intergenic 55.0%
!! TGGTGGGTCGGAGTTGATGA+TGG - chr5.3:57514151-57514170 None:intergenic 55.0%
ATGTGGCCTCGACCTGGGTA+TGG - chr5.3:57514042-57514061 None:intergenic 60.0%
GCCTCGACCTGGGTATGGTA+CGG - chr5.3:57514037-57514056 None:intergenic 60.0%
! GGTTGATGTGGCCTCGACCT+GGG - chr5.3:57514047-57514066 None:intergenic 60.0%
!! TGGGTGGTGGTTGGTGGAGA+AGG - chr5.3:57514006-57514025 None:intergenic 60.0%
GCCGTACCATACCCAGGTCG+AGG + chr5.3:57514033-57514052 MS.gene009785:CDS 65.0%
!! GGGTTGATGTGGCCTCGACC+TGG - chr5.3:57514048-57514067 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 57513982 57515843 57513982 ID=MS.gene009785
chr5.3 mRNA 57513982 57515843 57513982 ID=MS.gene009785.t1;Parent=MS.gene009785
chr5.3 exon 57513982 57514486 57513982 ID=MS.gene009785.t1.exon1;Parent=MS.gene009785.t1
chr5.3 CDS 57513982 57514486 57513982 ID=cds.MS.gene009785.t1;Parent=MS.gene009785.t1
chr5.3 exon 57514945 57515843 57514945 ID=MS.gene009785.t1.exon2;Parent=MS.gene009785.t1
chr5.3 CDS 57514945 57515843 57514945 ID=cds.MS.gene009785.t1;Parent=MS.gene009785.t1
Gene Sequence

>MS.gene009785

ATGTCCATGGAACCTCCAAATCCTTCTCCACCAACCACCACCCACATAGTAGCCGTACCATACCCAGGTCGAGGCCACATCAACCCAATGATGAACCTATGCAAACTCCTCATCTCCAACAACCCCAACATCCTTGTTACCTTTGTTGTCACGGAAGAATGGCTCACCATCATCAACTCCGACCCACCAAAACCAAACAACAACATCAAATTCGCCACCATCGCAAACGTTATTCCCTCCGAAGAAGGTCGAGGCAAAGATTTTCTTAATTTTCTTGAAGCTGTTATGACTAAAATGGAAGACCCATTTGAGAAACTACTTGATTCGTTTGAGAGAGTGCCGAGTGTGATTATACATGATAGCTATTTGTTTTGGGTTATAAGAGTTGCCAATAAGAGAAATGTTCCTGTTGCGTCGTTTTGGCCTATGTCGGCGTCGTTTTTTCTTGTTCTTAAACATTATCGTCGTTTGGAGGAACATGGTCATTACCCGGTAAATGTTTCAGGTTAGTTACTTTTCTGTTTTTTTTTTTTTTTACTAAATTTAAGGTACTTTTCTTTTATTTACCACTTCAGAGAAAAAACATTTATTTATGATTTAGCTACCTGGGAATATTCCTTTAGAAAGAAAGAAAACACTTTTAGTCCCATTTTACTTGCATTTTTTAGGAAAATTTCAAAAACTTGGTATGCTTCAGGGGCTACTTATTATATTGATATATAATTTAGGAACCGAATTAGAGAGAGGTATAGTTTATGGACTAAATCAATGGTTTATTCGACACATATTCCATCTATTTTTTTCTCGTATTAATCAGTTGAGGTTGGTATTATTTTTAATCATGTGGCGGTATGTCTCTTCTATAGTTTAATTTATTAGTGCCAAAAAAACACGATTTTCACATTAGAATTTGTTTATAAACATTTTTAAGTGTTTTGTGTGTTGTTTAAAATGCTGCAACAGAAGTTGGTGACAAACGTGTGGATTACATTCCGGGGAACTCATCAATTCGTCTCCAAGATTTTCCACTTCATGATGCGAGCTTACGCACCCGTAGATTGTTAGAATTAGCTCTCAATACCATACCATGGATGAAGAAAGCACAATATCTATTATTCCCTTCCATATATGAAATTGAGCCTCAAGCAATTGATGTTTTGAGAGAAGAATTTTCTATACCAATTTACACAATTGGACCTACCATACCTTATTTTAGTCACGGCCAAATTGCCTCTCTAAGCACCAACCAAGATGTTGAACTTGATTATATAAATTGGCTAGATAATCAACCCATTGGTTCTGTTCTATATGTCTCACAAGGGAGTTTTCTTTCGGTTTCAAGCGAACAAATCAATGAAATTGCGAATGGTTTGCGCGAAAGTGGTGTTAGATTCTTGTGGATAATGCGTGGAGAAAGTTCTAAGTGGAAAGATATTTGTGGGGAAAAAGGGTTTGTTTTGCCATGGTGTGACCAATTGAGAGTGTTGATGCATAGTGCTATAGGTGGTTTTTGGTCACATTGTGGGTGGAATTCAACAAGAGAAGGTTTGTTTTGTGGTGTGCCTTTTCTTACCTCTCCAATAATGATGGACCAACCATTGAATAGTAAATATATAGTTGAGGATTGGAAAGTTGGGTGGAGGGTGGAAAAGAAGGTTAAAGATGATGTTTTGATAAGAAGAGATGAAATTGCTAGGCTTGTTAGAAGATTTATGGATTTGGAAGATGATGAAGTGAAGGAAATGAGGAAAAGAGCAAGAGAGCTTCGCCAAATATGTCAACGTGCAATTGCAAGTGGAGGGTCATCCGAAAATAATTTGAAAGCTTTTCTTGGTAATATATTACATGGATCCAAACAATAG
Protein sequence

>MS.gene009785.t1

MSMEPPNPSPPTTTHIVAVPYPGRGHINPMMNLCKLLISNNPNILVTFVVTEEWLTIINSDPPKPNNNIKFATIANVIPSEEGRGKDFLNFLEAVMTKMEDPFEKLLDSFERVPSVIIHDSYLFWVIRVANKRNVPVASFWPMSASFFLVLKHYRRLEEHGHYPVNVSEVGDKRVDYIPGNSSIRLQDFPLHDASLRTRRLLELALNTIPWMKKAQYLLFPSIYEIEPQAIDVLREEFSIPIYTIGPTIPYFSHGQIASLSTNQDVELDYINWLDNQPIGSVLYVSQGSFLSVSSEQINEIANGLRESGVRFLWIMRGESSKWKDICGEKGFVLPWCDQLRVLMHSAIGGFWSHCGWNSTREGLFCGVPFLTSPIMMDQPLNSKYIVEDWKVGWRVEKKVKDDVLIRRDEIARLVRRFMDLEDDEVKEMRKRARELRQICQRAIASGGSSENNLKAFLGNILHGSKQ