AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene009786

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene009786.t1 MTR_5g075440 74.891 458 110 3 1 454 1 457 0.0 712
MS.gene009786.t1 MTR_5g072850 71.367 461 62 7 1 461 1 391 0.0 637
MS.gene009786.t1 MTR_5g072860 58.553 456 179 4 10 457 18 471 0.0 568
MS.gene009786.t1 MTR_3g031450 56.444 450 176 5 9 452 17 452 5.43e-174 496
MS.gene009786.t1 MTR_3g031400 55.333 450 183 5 7 452 15 450 1.12e-172 493
MS.gene009786.t1 MTR_5g072810 51.322 454 205 6 6 451 8 453 4.14e-162 466
MS.gene009786.t1 MTR_5g072840 52.009 448 200 7 10 451 10 448 4.16e-156 450
MS.gene009786.t1 MTR_5g072820 51.786 448 201 7 10 451 10 448 4.27e-154 445
MS.gene009786.t1 MTR_5g072830 51.663 451 197 8 10 451 10 448 9.87e-154 444
MS.gene009786.t1 MTR_5g035580 31.818 462 268 16 10 448 13 450 1.06e-59 202
MS.gene009786.t1 MTR_5g464810 31.884 483 281 17 7 453 9 479 1.81e-59 202
MS.gene009786.t1 MTR_5g064240 31.884 483 281 17 7 453 9 479 1.81e-59 202
MS.gene009786.t1 MTR_8g088560 31.185 481 277 15 1 451 1 457 8.12e-58 197
MS.gene009786.t1 MTR_6g038200 29.764 467 290 14 6 452 7 455 2.11e-56 194
MS.gene009786.t1 MTR_6g038220 30.444 473 289 16 1 452 1 454 4.52e-56 193
MS.gene009786.t1 MTR_5g464760 31.120 482 282 18 10 453 12 481 9.30e-56 192
MS.gene009786.t1 MTR_6g014040 30.390 487 282 15 10 453 10 482 1.05e-55 192
MS.gene009786.t1 MTR_7g080950 30.128 468 294 15 10 461 6 456 1.08e-55 192
MS.gene009786.t1 MTR_6g013990 31.134 485 278 14 10 453 10 479 1.22e-55 192
MS.gene009786.t1 MTR_5g035560 30.802 474 283 16 1 452 2 452 2.34e-55 192
MS.gene009786.t1 MTR_6g013900 31.967 488 271 16 10 453 10 480 3.56e-55 191
MS.gene009786.t1 MTR_6g014270 30.081 492 286 15 10 457 7 484 1.13e-54 190
MS.gene009786.t1 MTR_6g038230 28.964 473 290 15 6 454 7 457 1.24e-54 189
MS.gene009786.t1 MTR_6g014020 30.103 485 285 16 10 453 10 481 1.42e-53 187
MS.gene009786.t1 MTR_6g013920 31.828 487 273 15 10 453 10 480 1.51e-53 187
MS.gene009786.t1 MTR_3g479490 30.228 483 287 15 10 454 6 476 2.09e-53 186
MS.gene009786.t1 MTR_0036s0220 29.792 480 289 16 10 453 12 479 2.29e-53 186
MS.gene009786.t1 MTR_6g014290 29.339 484 288 16 10 453 10 479 3.70e-53 186
MS.gene009786.t1 MTR_6g014200 30.372 484 285 14 10 453 7 478 5.48e-53 185
MS.gene009786.t1 MTR_3g079480 30.470 489 278 16 10 454 21 491 1.24e-52 184
MS.gene009786.t1 MTR_8g083290 27.731 476 298 12 9 452 3 464 1.75e-52 183
MS.gene009786.t1 MTR_3g008010 27.664 488 299 15 6 453 6 479 2.76e-52 183
MS.gene009786.t1 MTR_2g008210 27.615 478 302 12 10 453 11 478 2.88e-52 183
MS.gene009786.t1 MTR_3g084520 28.033 478 301 13 9 452 5 473 1.52e-51 181
MS.gene009786.t1 MTR_6g013960 29.652 489 282 17 10 453 10 481 2.01e-51 181
MS.gene009786.t1 MTR_6g014310 29.132 484 291 14 10 453 11 482 2.07e-51 181
MS.gene009786.t1 MTR_3g084540 29.583 480 290 16 9 451 5 473 2.23e-51 181
MS.gene009786.t1 MTR_3g049970 29.053 475 290 14 10 451 9 469 2.89e-51 181
MS.gene009786.t1 MTR_6g038240 29.263 475 294 14 6 458 7 461 3.30e-51 180
MS.gene009786.t1 MTR_6g014250 28.074 488 297 15 6 453 6 479 3.81e-51 180
MS.gene009786.t1 MTR_6g038300 28.942 463 294 13 10 453 11 457 3.85e-51 180
MS.gene009786.t1 MTR_8g059425 29.424 486 293 14 10 457 10 483 4.58e-51 180
MS.gene009786.t1 MTR_7g080940 28.664 464 289 15 10 452 11 453 5.26e-51 179
MS.gene009786.t1 MTR_6g011340 30.247 486 283 14 10 453 10 481 5.69e-51 180
MS.gene009786.t1 MTR_6g014187 28.717 491 292 14 10 457 10 485 1.45e-50 179
MS.gene009786.t1 MTR_6g014220 28.512 484 292 15 10 453 10 479 3.24e-50 177
MS.gene009786.t1 MTR_8g083280 28.850 461 307 9 9 452 6 462 4.88e-50 177
MS.gene009786.t1 MTR_3g084530 29.876 482 285 18 9 451 5 472 7.53e-50 176
MS.gene009786.t1 MTR_4g095008 28.662 471 294 15 10 453 11 466 1.20e-49 177
MS.gene009786.t1 MTR_6g014050 30.453 486 282 15 10 453 11 482 1.97e-49 176
MS.gene009786.t1 MTR_7g080900 28.043 460 297 15 10 451 12 455 2.01e-49 175
MS.gene009786.t1 MTR_3g479520 29.508 488 284 15 10 454 15 485 2.44e-49 176
MS.gene009786.t1 MTR_0288s0020 29.167 480 277 14 10 453 10 462 2.51e-49 175
MS.gene009786.t1 MTR_6g013440 28.893 488 287 16 10 453 11 482 4.22e-49 175
MS.gene009786.t1 MTR_5g058320 29.814 483 274 16 10 453 10 466 5.88e-49 174
MS.gene009786.t1 MTR_1g107365 29.462 465 293 12 10 454 45 494 6.61e-49 175
MS.gene009786.t1 MTR_6g014300 27.975 479 287 15 10 453 12 467 1.00e-48 173
MS.gene009786.t1 MTR_6g014170 29.058 499 282 17 1 458 1 468 2.11e-48 172
MS.gene009786.t1 MTR_4g094920 29.149 470 291 15 11 453 27 481 3.34e-48 173
MS.gene009786.t1 MTR_7g080935 28.964 473 276 14 10 452 11 453 4.26e-48 172
MS.gene009786.t1 MTR_5g016480 28.092 477 294 15 11 452 9 471 9.12e-48 171
MS.gene009786.t1 MTR_6g013450 30.649 447 247 15 10 409 10 440 1.12e-47 171
MS.gene009786.t1 MTR_5g098930 28.032 503 267 16 10 454 5 470 2.15e-47 170
MS.gene009786.t1 MTR_3g069710 27.966 472 300 10 9 461 11 461 2.87e-47 169
MS.gene009786.t1 MTR_7g011470 28.392 479 287 12 10 453 10 467 3.14e-47 169
MS.gene009786.t1 MTR_1g107380 26.834 477 301 15 10 453 13 474 4.15e-47 169
MS.gene009786.t1 MTR_4g094220 28.216 482 290 15 10 448 7 475 2.17e-46 167
MS.gene009786.t1 MTR_1g107375 28.755 466 294 15 10 454 8 456 1.02e-45 165
MS.gene009786.t1 MTR_3g479470 28.807 486 290 16 10 455 13 482 1.96e-45 165
MS.gene009786.t1 MTR_1g107350 28.421 475 293 13 10 451 8 468 2.39e-45 164
MS.gene009786.t1 MTR_1g107315 29.400 483 292 16 10 458 8 475 2.98e-45 164
MS.gene009786.t1 MTR_1g107285 28.302 477 294 15 11 456 9 468 3.32e-45 164
MS.gene009786.t1 MTR_8g064870 28.631 482 297 12 11 458 12 480 4.44e-45 164
MS.gene009786.t1 MTR_7g011470 27.975 479 285 12 10 453 10 463 5.20e-45 163
MS.gene009786.t1 MTR_6g014150 28.542 487 298 13 10 457 7 482 6.91e-45 163
MS.gene009786.t1 MTR_8g066610 29.084 502 280 18 1 451 1 477 2.21e-44 162
MS.gene009786.t1 MTR_5g070090 28.542 480 284 18 6 451 7 461 3.35e-44 161
MS.gene009786.t1 MTR_1g107360 27.637 474 292 13 10 452 9 462 3.91e-44 161
MS.gene009786.t1 MTR_1g029540 28.118 473 274 17 15 452 19 460 5.18e-44 160
MS.gene009786.t1 MTR_7g070660 28.631 482 291 16 10 451 11 479 2.97e-43 159
MS.gene009786.t1 MTR_7g013200 28.035 453 293 10 10 449 5 437 1.37e-42 156
MS.gene009786.t1 MTR_1g032490 28.247 485 299 14 1 451 1 470 3.03e-42 156
MS.gene009786.t1 MTR_7g117170 27.564 468 292 12 11 445 16 469 3.56e-42 156
MS.gene009786.t1 MTR_5g031840 26.694 487 295 12 1 451 1 461 4.83e-42 155
MS.gene009786.t1 MTR_1g062380 25.451 499 317 13 1 454 7 495 4.91e-42 156
MS.gene009786.t1 MTR_3g009510 28.252 492 275 16 11 448 6 473 7.52e-42 155
MS.gene009786.t1 MTR_4g008630 27.479 484 274 20 11 452 15 463 1.17e-41 154
MS.gene009786.t1 MTR_8g009050 28.302 477 279 15 10 445 6 460 2.27e-41 154
MS.gene009786.t1 MTR_7g102460 28.138 494 287 17 10 452 9 485 2.28e-41 154
MS.gene009786.t1 MTR_5g045960 27.525 505 285 18 10 456 9 490 2.41e-41 154
MS.gene009786.t1 MTR_7g055710 26.971 482 301 13 10 450 11 482 4.66e-41 153
MS.gene009786.t1 MTR_6g033625 26.763 482 282 15 11 447 5 460 6.36e-41 152
MS.gene009786.t1 MTR_7g117405 25.971 489 305 12 6 452 8 481 8.66e-41 152
MS.gene009786.t1 MTR_6g033675 28.238 471 281 15 15 447 9 460 1.10e-40 152
MS.gene009786.t1 MTR_5g090700 25.992 504 289 17 10 456 5 481 1.58e-40 151
MS.gene009786.t1 MTR_5g031830 27.345 501 283 20 1 451 1 470 6.14e-40 150
MS.gene009786.t1 MTR_5g031860 26.122 490 288 13 7 451 9 469 6.83e-40 149
MS.gene009786.t1 MTR_7g013240 28.414 454 289 11 10 449 6 437 7.24e-40 149
MS.gene009786.t1 MTR_6g033725 26.598 485 294 15 11 456 5 466 1.04e-39 149
MS.gene009786.t1 MTR_7g013180 29.336 467 274 16 10 449 5 442 1.19e-39 148
MS.gene009786.t1 MTR_0184s0040 27.579 475 292 12 10 449 21 478 1.32e-39 149
MS.gene009786.t1 MTR_0078s0190 27.579 475 292 12 10 449 21 478 1.32e-39 149
MS.gene009786.t1 MTR_2g040530 27.273 473 286 13 17 451 12 464 1.47e-39 149
MS.gene009786.t1 MTR_3g479610 31.329 316 176 8 165 454 15 315 1.69e-39 145
MS.gene009786.t1 MTR_7g070610 28.056 499 298 18 1 451 1 486 1.90e-39 149
MS.gene009786.t1 MTR_5g090660 25.615 488 302 14 10 454 5 474 2.12e-39 150
MS.gene009786.t1 MTR_4g024020 26.775 493 298 14 10 452 9 488 2.84e-39 148
MS.gene009786.t1 MTR_5g045970 26.036 507 311 16 1 458 7 498 3.13e-39 148
MS.gene009786.t1 MTR_7g102490 27.163 497 290 15 10 452 9 487 3.60e-39 148
MS.gene009786.t1 MTR_7g102550 29.303 488 288 17 9 450 8 484 3.85e-39 147
MS.gene009786.t1 MTR_5g090630 26.585 489 286 14 10 452 5 466 4.31e-39 147
MS.gene009786.t1 MTR_7g102560 26.069 491 310 12 10 457 9 489 4.63e-39 147
MS.gene009786.t1 MTR_7g070800 27.216 485 295 15 10 451 6 475 7.33e-39 147
MS.gene009786.t1 MTR_5g090600 26.105 475 302 14 10 456 5 458 7.98e-39 146
MS.gene009786.t1 MTR_8g064880 27.976 504 276 15 2 451 5 475 1.36e-38 146
MS.gene009786.t1 MTR_8g006730 27.349 479 293 13 6 447 2 462 1.48e-38 145
MS.gene009786.t1 MTR_2g046820 26.128 421 261 11 61 451 62 462 2.33e-38 145
MS.gene009786.t1 MTR_8g077590 28.163 490 278 15 2 447 3 462 3.41e-38 145
MS.gene009786.t1 MTR_6g014240 28.067 481 278 17 10 457 7 452 3.55e-38 144
MS.gene009786.t1 MTR_8g009063 26.850 473 295 11 10 447 13 469 4.09e-38 145
MS.gene009786.t1 MTR_8g027885 27.254 477 291 15 3 444 10 465 6.20e-38 144
MS.gene009786.t1 MTR_8g006710 27.197 478 292 14 11 451 7 465 8.86e-38 144
MS.gene009786.t1 MTR_3g069690 25.159 473 294 13 10 452 8 450 9.02e-38 143
MS.gene009786.t1 MTR_8g009055 27.637 474 286 14 10 445 6 460 1.21e-37 143
MS.gene009786.t1 MTR_6g033660 27.311 476 280 14 11 444 5 456 1.26e-37 143
MS.gene009786.t1 MTR_7g013220 26.940 464 295 11 10 449 5 448 1.50e-37 142
MS.gene009786.t1 MTR_6g023665 27.273 484 295 15 11 459 14 475 4.03e-37 142
MS.gene009786.t1 MTR_0078s0010 26.754 456 276 13 9 425 5 441 6.92e-37 141
MS.gene009786.t1 MTR_7g047030 27.902 448 281 11 9 425 5 441 9.15e-37 141
MS.gene009786.t1 MTR_7g047270 27.902 448 281 11 9 425 5 441 9.15e-37 141
MS.gene009786.t1 MTR_4g031800 26.305 479 293 15 11 448 10 469 1.03e-36 141
MS.gene009786.t1 MTR_8g074550 25.918 490 296 12 9 445 7 482 1.13e-36 141
MS.gene009786.t1 MTR_7g071040 26.899 487 298 17 10 451 17 490 1.15e-36 141
MS.gene009786.t1 MTR_2g046750 25.314 478 290 15 17 451 12 465 1.18e-36 140
MS.gene009786.t1 MTR_4g485620 29.208 404 236 16 82 455 75 458 1.50e-36 140
MS.gene009786.t1 MTR_4g485630 27.255 499 272 17 10 451 9 473 1.78e-36 140
MS.gene009786.t1 MTR_5g090580 25.761 493 297 17 10 454 5 476 2.39e-36 140
MS.gene009786.t1 MTR_7g013260 27.133 457 292 13 10 449 6 438 2.80e-36 139
MS.gene009786.t1 MTR_8g008990 26.681 476 290 13 10 445 6 462 7.03e-36 138
MS.gene009786.t1 MTR_6g005600 27.837 467 285 14 10 440 6 456 7.51e-36 138
MS.gene009786.t1 MTR_5g090620 25.255 491 300 15 10 452 5 476 1.39e-35 137
MS.gene009786.t1 MTR_6g488280 26.059 472 296 13 11 447 7 460 2.39e-35 137
MS.gene009786.t1 MTR_0428s0010 26.059 472 296 13 11 447 7 460 2.39e-35 137
MS.gene009786.t1 MTR_5g070040 27.292 469 271 19 10 433 11 454 2.51e-35 137
MS.gene009786.t1 MTR_8g027870 27.083 480 288 16 3 444 10 465 2.59e-35 137
MS.gene009786.t1 MTR_7g070860 26.964 471 292 14 14 451 11 462 3.96e-35 136
MS.gene009786.t1 MTR_1g019510 27.883 477 282 14 10 447 6 459 5.17e-35 136
MS.gene009786.t1 MTR_8g008970 27.932 469 289 12 10 445 6 458 6.82e-35 138
MS.gene009786.t1 MTR_8g008970 29.864 221 134 6 235 445 573 782 1.60e-23 104
MS.gene009786.t1 MTR_7g070910 26.186 485 304 15 10 451 11 484 9.12e-35 135
MS.gene009786.t1 MTR_5g090670 25.896 502 287 16 10 454 5 478 9.50e-35 135
MS.gene009786.t1 MTR_6g014160 28.783 337 188 10 61 370 47 358 1.19e-34 134
MS.gene009786.t1 MTR_8g009067 27.789 475 288 13 10 448 6 461 1.51e-34 135
MS.gene009786.t1 MTR_6g033615 25.482 467 289 12 11 445 5 444 1.60e-34 134
MS.gene009786.t1 MTR_7g070940 26.639 488 305 16 1 451 1 472 2.09e-34 134
MS.gene009786.t1 MTR_8g012650 29.101 378 221 8 106 451 109 471 2.11e-34 134
MS.gene009786.t1 MTR_4g082810 29.177 401 238 14 10 376 7 395 2.65e-34 133
MS.gene009786.t1 MTR_5g072825 56.701 97 39 1 1 97 1 94 2.96e-34 124
MS.gene009786.t1 MTR_8g466240 25.157 477 307 15 1 451 1 453 4.21e-34 133
MS.gene009786.t1 MTR_8g009073 28.632 475 282 17 10 447 6 460 4.43e-34 133
MS.gene009786.t1 MTR_8g043470 26.154 390 209 10 61 428 15 347 6.87e-34 131
MS.gene009786.t1 MTR_7g070740 26.240 484 304 16 10 451 11 483 1.25e-33 132
MS.gene009786.t1 MTR_7g102450 23.319 476 326 8 10 456 11 476 1.49e-33 132
MS.gene009786.t1 MTR_2g059240 25.519 482 305 16 6 453 9 470 2.65e-33 131
MS.gene009786.t1 MTR_8g009067 32.026 306 167 9 171 448 51 343 3.68e-33 129
MS.gene009786.t1 MTR_0477s0010 28.090 356 196 9 118 453 3 318 4.51e-33 127
MS.gene009786.t1 MTR_7g070780 26.132 486 302 16 10 451 11 483 4.54e-33 131
MS.gene009786.t1 MTR_8g465670 26.240 484 287 15 11 448 8 467 5.03e-33 130
MS.gene009786.t1 MTR_4g064987 25.000 476 300 14 6 452 3 450 8.13e-33 129
MS.gene009786.t1 MTR_8g090095 25.941 478 287 16 15 452 30 480 8.50e-33 130
MS.gene009786.t1 MTR_7g070810 25.911 494 304 15 1 451 1 475 1.16e-32 129
MS.gene009786.t1 MTR_7g102520 24.704 506 310 14 1 452 1 489 1.65e-32 129
MS.gene009786.t1 MTR_8g006260 27.596 366 208 10 110 440 115 458 2.25e-32 129
MS.gene009786.t1 MTR_7g070930 25.447 503 307 18 1 451 1 487 4.37e-32 128
MS.gene009786.t1 MTR_7g046490 32.468 308 164 9 171 449 169 461 5.82e-32 127
MS.gene009786.t1 MTR_8g012635 27.807 374 223 8 106 447 109 467 7.66e-32 127
MS.gene009786.t1 MTR_4g117960 26.875 480 295 18 14 451 15 480 1.25e-31 127
MS.gene009786.t1 MTR_5g090610 24.547 497 291 13 10 457 5 466 1.43e-31 126
MS.gene009786.t1 MTR_0184s0030 25.106 470 294 14 10 440 6 456 1.45e-31 126
MS.gene009786.t1 MTR_0078s0060 26.722 479 299 15 10 453 6 467 2.13e-31 126
MS.gene009786.t1 MTR_0536s0010 25.157 477 293 16 14 451 25 476 2.38e-31 126
MS.gene009786.t1 MTR_0891s0010 29.630 270 152 6 207 452 35 290 2.70e-31 122
MS.gene009786.t1 MTR_6g013680 27.208 419 225 16 61 453 12 376 4.08e-31 123
MS.gene009786.t1 MTR_4g118000 23.625 491 305 16 1 451 6 466 4.74e-31 125
MS.gene009786.t1 MTR_8g009073 32.143 308 162 12 171 447 40 331 6.87e-31 122
MS.gene009786.t1 MTR_0009s0240 24.788 472 307 18 6 448 3 455 9.58e-31 124
MS.gene009786.t1 MTR_8g012745 26.882 372 226 9 106 447 109 464 1.06e-30 124
MS.gene009786.t1 MTR_5g087620 25.840 476 273 15 10 426 10 464 1.11e-30 124
MS.gene009786.t1 MTR_4g082820 26.907 472 277 15 10 427 7 464 2.15e-30 123
MS.gene009786.t1 MTR_8g006270 27.624 362 213 12 110 440 109 452 2.98e-30 122
MS.gene009786.t1 MTR_2g098430 24.082 490 302 15 11 449 7 477 3.56e-30 122
MS.gene009786.t1 MTR_8g006220 26.726 449 259 13 11 410 7 434 3.69e-30 122
MS.gene009786.t1 MTR_8g071070 25.567 485 297 18 6 448 3 465 5.24e-30 122
MS.gene009786.t1 MTR_6g014190 29.293 297 176 10 178 453 5 288 6.33e-30 118
MS.gene009786.t1 MTR_4g064987 24.473 474 299 14 6 452 3 444 6.39e-30 121
MS.gene009786.t1 MTR_5g027210 24.544 493 262 17 11 427 5 463 7.32e-30 122
MS.gene009786.t1 MTR_4g117950 25.466 483 285 19 14 451 10 462 7.77e-30 121
MS.gene009786.t1 MTR_0536s0020 24.040 495 308 16 1 451 9 479 8.06e-30 121
MS.gene009786.t1 MTR_4g485640 28.424 387 227 13 94 448 295 663 9.20e-30 123
MS.gene009786.t1 MTR_7g067120 24.889 450 280 18 1 432 1 410 9.37e-30 120
MS.gene009786.t1 MTR_8g007585 33.498 203 116 4 261 453 200 393 1.50e-29 119
MS.gene009786.t1 MTR_8g012630 33.796 216 106 5 261 447 204 411 2.52e-29 119
MS.gene009786.t1 MTR_8g044140 27.990 393 235 15 92 451 71 448 2.65e-29 120
MS.gene009786.t1 MTR_4g108250 24.949 493 303 15 10 451 11 487 2.91e-29 120
MS.gene009786.t1 MTR_2g035020 24.897 486 298 16 14 451 15 481 7.46e-29 119
MS.gene009786.t1 MTR_8g032950 25.257 487 299 18 11 451 13 480 8.40e-29 119
MS.gene009786.t1 MTR_5g016660 26.978 493 282 21 14 451 14 483 9.51e-29 118
MS.gene009786.t1 MTR_2g034990 25.926 486 293 18 14 451 15 481 1.03e-28 118
MS.gene009786.t1 MTR_6g035185 24.174 484 305 18 14 451 15 482 1.61e-28 118
MS.gene009786.t1 MTR_3g009490 36.649 191 86 5 287 449 3 186 3.44e-28 110
MS.gene009786.t1 MTR_6g078320 25.510 490 295 17 1 441 1 469 3.60e-28 117
MS.gene009786.t1 MTR_4g117980 25.761 493 285 16 14 451 15 481 5.89e-28 116
MS.gene009786.t1 MTR_8g012730 35.294 221 106 6 256 447 92 304 5.96e-28 113
MS.gene009786.t1 MTR_5g019580 24.063 507 305 16 10 461 7 488 1.36e-27 115
MS.gene009786.t1 MTR_1g040310 25.854 410 257 12 68 451 95 483 1.78e-27 115
MS.gene009786.t1 MTR_4g117890 24.124 485 296 17 11 449 14 472 1.84e-27 115
MS.gene009786.t1 MTR_4g485590 26.471 408 236 12 9 386 8 381 6.12e-27 112
MS.gene009786.t1 MTR_2g035040 27.394 376 225 12 110 451 25 386 8.82e-27 111
MS.gene009786.t1 MTR_7g012120 26.221 389 244 9 92 451 109 483 1.60e-26 112
MS.gene009786.t1 MTR_5g067170 24.017 483 304 16 14 451 15 479 2.51e-26 111
MS.gene009786.t1 MTR_7g470610 28.041 296 169 8 115 390 2 273 4.18e-26 107
MS.gene009786.t1 MTR_7g070583 28.041 296 169 8 115 390 2 273 4.18e-26 107
MS.gene009786.t1 MTR_5g098960 25.926 405 252 15 11 386 8 393 5.70e-26 110
MS.gene009786.t1 MTR_5g019580 24.000 500 286 16 10 461 59 512 6.42e-26 110
MS.gene009786.t1 MTR_5g029800 24.291 494 287 18 14 451 15 477 6.48e-26 110
MS.gene009786.t1 MTR_1g019520 32.524 206 105 5 261 440 4 201 6.82e-26 105
MS.gene009786.t1 MTR_7g067330 22.785 474 312 18 1 460 1 434 4.75e-25 107
MS.gene009786.t1 MTR_8g068340 26.265 415 254 15 10 389 12 409 8.05e-25 107
MS.gene009786.t1 MTR_7g070870 25.537 419 265 14 2 390 12 413 9.41e-25 107
MS.gene009786.t1 MTR_7g070760 32.979 188 103 3 207 386 29 201 1.36e-24 101
MS.gene009786.t1 MTR_6g035265 23.542 480 306 16 14 452 15 474 1.55e-24 106
MS.gene009786.t1 MTR_6g014186 24.262 474 289 15 10 453 7 440 2.31e-24 105
MS.gene009786.t1 MTR_5g039900 26.330 376 241 11 103 451 117 483 8.43e-24 104
MS.gene009786.t1 MTR_8g068330 22.963 405 280 8 10 389 8 405 8.68e-24 103
MS.gene009786.t1 MTR_4g128690 23.276 464 310 18 6 448 11 449 1.54e-23 103
MS.gene009786.t1 MTR_6g036650 24.490 441 284 15 10 418 18 441 3.57e-23 102
MS.gene009786.t1 MTR_8g068360 24.455 413 263 15 10 389 12 408 5.09e-23 101
MS.gene009786.t1 MTR_8g007650 21.711 456 308 14 10 432 7 446 7.16e-23 101
MS.gene009786.t1 MTR_2086s0010 30.556 180 105 4 284 452 2 172 9.22e-23 95.5
MS.gene009786.t1 MTR_1996s0010 30.556 180 105 4 284 452 2 172 9.22e-23 95.5
MS.gene009786.t1 MTR_8g009840 34.197 193 96 6 278 445 333 519 1.55e-22 100
MS.gene009786.t1 MTR_5g040030 25.135 370 241 10 110 451 126 487 1.86e-22 100
MS.gene009786.t1 MTR_6g035295 25.926 378 227 12 110 451 124 484 2.02e-22 100
MS.gene009786.t1 MTR_8g007565 21.491 456 309 14 10 432 7 446 2.80e-22 99.8
MS.gene009786.t1 MTR_7g071050 25.110 454 247 18 10 424 13 412 4.05e-22 98.6
MS.gene009786.t1 MTR_6g014185 29.344 259 138 9 205 452 121 345 8.53e-22 97.1
MS.gene009786.t1 MTR_5g004940 31.140 228 119 7 235 451 177 377 1.56e-21 96.7
MS.gene009786.t1 MTR_7g039550 27.757 263 161 8 215 451 2 261 1.84e-21 94.4
MS.gene009786.t1 MTR_2g046620 21.795 468 321 15 10 454 16 461 2.07e-21 97.1
MS.gene009786.t1 MTR_4g128720 21.258 461 318 15 10 448 15 452 2.19e-21 96.7
MS.gene009786.t1 MTR_1g107325 30.556 180 115 2 280 451 175 352 1.03e-20 93.6
MS.gene009786.t1 MTR_2g008220 24.682 393 262 15 10 378 14 396 1.14e-20 94.7
MS.gene009786.t1 MTR_1g090270 22.894 463 286 17 10 432 15 446 4.46e-20 92.8
MS.gene009786.t1 MTR_5g066410 22.271 458 280 15 14 432 2 422 5.45e-20 92.4
MS.gene009786.t1 MTR_5g066390 32.335 167 94 5 297 452 57 215 5.82e-20 88.6
MS.gene009786.t1 MTR_4g123553 22.750 400 271 14 10 386 15 399 6.64e-20 92.4
MS.gene009786.t1 MTR_4g059370 28.519 270 159 8 200 452 133 385 8.07e-20 91.3
MS.gene009786.t1 MTR_7g080960 24.889 225 111 5 237 451 294 470 4.23e-19 90.1
MS.gene009786.t1 MTR_2g083490 23.516 455 303 16 1 429 1 436 5.59e-19 89.4
MS.gene009786.t1 MTR_2g008225 24.495 396 259 14 10 378 15 397 1.31e-18 88.6
MS.gene009786.t1 MTR_2g014900 24.396 455 280 19 10 428 7 433 1.38e-18 88.2
MS.gene009786.t1 MTR_4g077960 22.881 472 295 19 20 458 2 437 2.07e-18 87.8
MS.gene009786.t1 MTR_7g070995 31.387 137 86 2 322 451 9 144 4.12e-18 81.6
MS.gene009786.t1 MTR_0536s0030 34.615 156 91 4 304 451 199 351 4.34e-18 85.9
MS.gene009786.t1 MTR_8g056740 33.582 134 81 2 261 386 168 301 6.78e-18 85.9
MS.gene009786.t1 MTR_6g042310 22.222 405 267 15 10 386 18 402 1.57e-17 85.1
MS.gene009786.t1 MTR_6g014000 33.858 127 76 2 321 447 33 151 2.72e-17 84.7
MS.gene009786.t1 MTR_2g083380 24.197 467 285 20 1 429 18 453 1.10e-16 82.8
MS.gene009786.t1 MTR_2g083430 22.870 446 301 15 10 429 8 436 1.07e-15 79.3
MS.gene009786.t1 MTR_2g008226 21.245 466 310 15 1 426 1 449 2.62e-15 78.2
MS.gene009786.t1 MTR_4g079250 22.296 453 295 14 10 429 8 436 6.40e-15 77.0
MS.gene009786.t1 MTR_5g090690 28.378 148 70 3 235 354 166 305 1.32e-14 75.5
MS.gene009786.t1 MTR_0199s0010 25.442 283 182 10 6 269 6 278 9.02e-14 72.0
MS.gene009786.t1 MTR_3g435310 27.451 204 128 6 263 458 228 419 4.34e-13 71.2
MS.gene009786.t1 MTR_8g006230 26.415 212 143 5 100 308 45 246 4.47e-13 70.1
MS.gene009786.t1 MTR_2g083390 26.267 217 137 5 213 427 215 410 8.85e-13 70.5
MS.gene009786.t1 MTR_6g013435 21.937 351 214 11 118 453 3 308 7.26e-12 66.6
MS.gene009786.t1 MTR_2g083420 26.389 216 138 5 213 427 215 410 9.21e-12 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene009786.t1 AT2G30150 50.222 450 216 5 5 451 8 452 2.42e-163 469
MS.gene009786.t1 AT2G30140 51.101 454 211 7 2 451 5 451 8.06e-162 465
MS.gene009786.t1 AT2G30140 51.101 454 210 7 2 451 5 450 2.01e-161 464
MS.gene009786.t1 AT2G30150 50.567 441 210 5 14 451 1 436 1.37e-160 461
MS.gene009786.t1 AT2G28080 31.941 407 235 9 14 389 22 417 5.86e-63 212
MS.gene009786.t1 AT2G36970 26.899 487 303 11 1 451 1 470 7.39e-62 209
MS.gene009786.t1 AT1G05675 29.832 476 278 14 9 455 5 453 7.67e-61 205
MS.gene009786.t1 AT2G31750 29.724 471 280 13 10 452 8 455 3.40e-60 204
MS.gene009786.t1 AT2G31750 29.560 477 285 13 10 458 8 461 5.54e-60 204
MS.gene009786.t1 AT1G05680 29.412 476 280 14 9 455 5 453 5.62e-59 200
MS.gene009786.t1 AT1G24100 29.622 476 289 15 2 451 3 458 3.84e-55 191
MS.gene009786.t1 AT3G21560 28.838 482 300 11 1 451 3 472 4.13e-55 191
MS.gene009786.t1 AT1G22340 29.253 482 292 16 10 453 13 483 9.03e-55 190
MS.gene009786.t1 AT1G22360 27.500 480 304 13 9 453 9 479 5.92e-54 188
MS.gene009786.t1 AT1G05560 27.743 483 282 13 3 451 2 451 1.05e-53 187
MS.gene009786.t1 AT1G05560 27.615 478 289 12 3 451 52 501 2.62e-53 187
MS.gene009786.t1 AT4G15480 28.330 473 295 12 10 451 19 478 2.88e-53 186
MS.gene009786.t1 AT2G43840 29.979 477 264 16 9 451 6 446 3.10e-52 182
MS.gene009786.t1 AT2G43840 29.979 477 264 16 9 451 6 446 5.67e-52 182
MS.gene009786.t1 AT4G15550 26.415 477 298 11 10 450 13 472 6.57e-52 182
MS.gene009786.t1 AT2G23260 27.907 473 303 12 1 453 1 455 2.31e-51 180
MS.gene009786.t1 AT2G31790 28.541 466 290 13 9 449 7 454 9.34e-51 179
MS.gene009786.t1 AT1G22360 26.458 480 297 13 9 453 9 467 1.01e-50 179
MS.gene009786.t1 AT2G43820 30.932 472 264 17 10 451 7 446 2.03e-50 177
MS.gene009786.t1 AT1G22400 28.416 461 282 12 10 433 13 462 2.17e-50 178
MS.gene009786.t1 AT1G78270 28.478 460 282 13 10 433 13 461 2.34e-50 178
MS.gene009786.t1 AT2G23250 29.581 453 275 17 19 451 7 435 7.86e-50 176
MS.gene009786.t1 AT4G15490 26.947 475 310 13 5 452 3 467 1.09e-49 176
MS.gene009786.t1 AT1G22380 28.903 474 276 17 10 436 13 472 3.85e-49 175
MS.gene009786.t1 AT1G05530 26.371 474 293 12 10 451 5 454 3.45e-48 172
MS.gene009786.t1 AT1G10400 30.316 475 281 21 10 450 7 465 4.19e-47 169
MS.gene009786.t1 AT4G15500 27.215 474 303 15 6 452 5 463 6.97e-47 169
MS.gene009786.t1 AT1G22370 27.193 456 288 13 10 433 13 456 1.31e-46 168
MS.gene009786.t1 AT5G14860 28.980 490 286 19 6 451 4 475 1.47e-46 168
MS.gene009786.t1 AT3G21790 27.565 497 285 16 10 452 4 479 3.21e-45 164
MS.gene009786.t1 AT4G15280 25.458 491 298 12 10 452 4 474 3.82e-45 164
MS.gene009786.t1 AT4G15280 25.458 491 298 12 10 452 36 506 6.72e-45 164
MS.gene009786.t1 AT3G46660 26.940 464 306 11 1 448 6 452 3.05e-44 161
MS.gene009786.t1 AT5G59590 26.383 470 306 11 1 451 1 449 1.33e-43 159
MS.gene009786.t1 AT3G21780 26.931 479 299 15 10 451 4 468 1.88e-43 159
MS.gene009786.t1 AT4G01070 26.907 472 291 13 10 445 8 461 2.32e-43 159
MS.gene009786.t1 AT2G16890 29.436 479 283 19 9 451 8 467 1.56e-42 157
MS.gene009786.t1 AT2G36750 26.962 497 287 16 10 452 10 484 1.84e-42 157
MS.gene009786.t1 AT2G36800 26.523 509 292 17 2 452 4 488 1.90e-42 157
MS.gene009786.t1 AT5G59580 26.623 462 300 12 10 453 9 449 2.47e-42 156
MS.gene009786.t1 AT5G38010 25.316 474 310 11 1 451 1 453 3.36e-42 155
MS.gene009786.t1 AT3G46670 26.293 464 307 11 1 448 1 445 2.04e-41 153
MS.gene009786.t1 AT2G36780 26.036 507 291 20 10 458 14 494 2.55e-41 154
MS.gene009786.t1 AT3G02100 28.541 466 286 16 10 449 13 457 1.29e-40 151
MS.gene009786.t1 AT5G38040 25.942 451 298 12 18 451 18 449 1.53e-40 151
MS.gene009786.t1 AT3G21800 25.000 492 306 14 11 456 6 480 2.73e-40 151
MS.gene009786.t1 AT3G11340 26.087 460 298 12 11 452 10 445 2.79e-40 150
MS.gene009786.t1 AT3G21760 25.941 505 293 14 10 456 4 485 3.50e-40 150
MS.gene009786.t1 AT2G29740 28.986 483 286 15 10 451 8 474 4.15e-40 150
MS.gene009786.t1 AT2G16890 30.879 421 237 17 9 392 8 411 4.44e-40 149
MS.gene009786.t1 AT5G05900 26.522 460 300 9 11 452 9 448 7.08e-40 149
MS.gene009786.t1 AT1G01390 30.000 430 229 13 10 392 8 412 1.51e-39 149
MS.gene009786.t1 AT1G01390 30.000 430 229 13 10 392 25 429 2.11e-39 149
MS.gene009786.t1 AT1G01420 26.556 482 279 15 10 445 8 460 1.18e-38 146
MS.gene009786.t1 AT1G01420 26.556 482 279 15 10 445 11 463 1.32e-38 146
MS.gene009786.t1 AT2G36790 26.978 493 293 16 10 452 13 488 1.38e-38 146
MS.gene009786.t1 AT3G46680 25.325 462 302 13 9 449 8 447 6.24e-38 144
MS.gene009786.t1 AT3G21750 26.283 487 294 14 10 452 4 469 8.35e-38 144
MS.gene009786.t1 AT3G53160 25.866 491 301 19 10 452 8 483 8.83e-38 144
MS.gene009786.t1 AT3G46690 25.983 458 302 13 9 448 8 446 1.43e-37 143
MS.gene009786.t1 AT1G73880 25.738 474 303 14 9 452 13 467 3.03e-37 142
MS.gene009786.t1 AT2G15480 25.720 486 302 16 10 451 10 480 5.33e-37 142
MS.gene009786.t1 AT3G53150 26.482 506 300 16 10 456 22 514 7.64e-37 142
MS.gene009786.t1 AT2G36770 26.253 499 293 19 10 454 14 491 1.05e-36 141
MS.gene009786.t1 AT2G36760 24.846 487 315 12 10 454 14 491 1.74e-36 140
MS.gene009786.t1 AT3G46720 26.009 446 304 9 11 448 10 437 1.90e-36 139
MS.gene009786.t1 AT2G15480 25.101 494 305 16 10 451 10 490 3.33e-36 140
MS.gene009786.t1 AT3G55700 25.586 469 300 14 9 452 7 451 3.85e-36 139
MS.gene009786.t1 AT5G03490 26.681 461 285 15 10 442 19 454 3.98e-36 139
MS.gene009786.t1 AT5G05870 26.439 469 298 12 9 451 7 454 7.87e-36 138
MS.gene009786.t1 AT2G29750 28.745 494 274 19 10 452 8 474 1.16e-35 138
MS.gene009786.t1 AT3G46700 25.597 461 299 13 10 451 9 444 1.46e-35 137
MS.gene009786.t1 AT4G34131 26.008 496 307 17 1 452 1 480 1.48e-35 138
MS.gene009786.t1 AT5G65550 26.392 413 257 11 5 386 4 400 1.69e-35 137
MS.gene009786.t1 AT2G15490 25.458 491 297 18 10 451 7 477 4.31e-35 136
MS.gene009786.t1 AT3G55710 25.212 472 302 15 9 452 7 455 1.14e-34 135
MS.gene009786.t1 AT2G15490 24.899 494 299 17 10 451 7 480 2.17e-34 134
MS.gene009786.t1 AT5G05880 25.862 464 299 11 10 451 8 448 2.35e-34 134
MS.gene009786.t1 AT4G14090 23.965 459 314 11 10 450 13 454 3.27e-34 134
MS.gene009786.t1 AT4G15260 27.855 359 219 11 122 452 9 355 2.81e-33 129
MS.gene009786.t1 AT3G46650 25.431 464 293 11 1 447 1 428 1.18e-32 129
MS.gene009786.t1 AT5G26310 24.101 473 302 12 10 444 7 460 1.45e-32 129
MS.gene009786.t1 AT5G05890 24.628 471 300 11 10 451 8 452 2.54e-32 128
MS.gene009786.t1 AT2G29730 31.034 261 157 8 207 452 211 463 3.20e-32 128
MS.gene009786.t1 AT1G07240 27.446 368 227 10 110 452 124 476 4.64e-32 128
MS.gene009786.t1 AT1G51210 25.355 422 270 15 10 409 20 418 8.12e-32 126
MS.gene009786.t1 AT1G07260 25.410 488 298 16 10 452 6 472 1.39e-31 126
MS.gene009786.t1 AT3G16520 28.863 343 204 11 127 448 133 456 1.75e-31 126
MS.gene009786.t1 AT2G26480 24.729 461 315 9 11 457 9 451 1.86e-31 125
MS.gene009786.t1 AT2G29710 22.363 474 322 12 10 452 5 463 2.97e-31 125
MS.gene009786.t1 AT4G34138 23.926 489 308 17 10 453 11 480 2.98e-31 125
MS.gene009786.t1 AT4G36770 25.696 467 267 15 17 434 11 446 4.83e-31 125
MS.gene009786.t1 AT1G07250 32.453 265 147 10 208 451 219 472 1.90e-30 123
MS.gene009786.t1 AT5G17050 23.207 474 319 13 3 452 5 457 2.31e-30 123
MS.gene009786.t1 AT2G18570 24.000 475 301 12 10 444 5 459 4.00e-30 122
MS.gene009786.t1 AT3G16520 30.464 302 175 10 129 409 135 422 4.66e-30 122
MS.gene009786.t1 AT5G05860 25.466 483 296 14 1 453 1 449 5.22e-30 122
MS.gene009786.t1 AT3G16520 30.464 302 175 10 129 409 135 422 6.41e-30 121
MS.gene009786.t1 AT3G50740 24.254 503 289 17 10 454 7 475 7.03e-30 122
MS.gene009786.t1 AT5G37950 27.044 318 208 8 61 361 33 343 7.60e-30 119
MS.gene009786.t1 AT5G66690 25.726 482 283 15 10 444 7 460 1.07e-29 121
MS.gene009786.t1 AT4G34135 24.385 488 306 17 10 451 11 481 2.01e-28 117
MS.gene009786.t1 AT5G37950 26.415 318 204 8 61 361 33 337 8.29e-28 114
MS.gene009786.t1 AT3G22250 26.392 485 266 17 11 445 9 452 1.33e-26 112
MS.gene009786.t1 AT2G18560 27.815 302 179 8 171 444 79 369 1.41e-26 110
MS.gene009786.t1 AT5G12890 23.577 492 315 16 2 448 3 478 2.79e-26 111
MS.gene009786.t1 AT1G30530 23.191 470 318 14 3 452 5 451 3.97e-26 110
MS.gene009786.t1 AT5G17040 21.720 465 315 13 9 452 4 440 7.41e-25 107
MS.gene009786.t1 AT1G06000 23.333 480 278 20 10 453 10 435 1.18e-24 106
MS.gene009786.t1 AT5G49690 25.439 456 278 18 10 432 10 436 3.84e-24 105
MS.gene009786.t1 AT5G17030 22.222 477 319 16 3 452 5 456 8.71e-24 103
MS.gene009786.t1 AT1G22370 25.260 289 186 8 165 433 8 286 1.15e-23 101
MS.gene009786.t1 AT4G01070 26.948 308 205 8 10 307 8 305 6.56e-21 94.0
MS.gene009786.t1 AT5G53990 23.596 445 284 17 10 429 6 419 1.17e-20 94.7
MS.gene009786.t1 AT5G17040 23.054 334 215 9 135 452 31 338 3.38e-20 92.0
MS.gene009786.t1 AT5G54010 23.629 474 294 19 10 451 6 443 1.42e-19 91.3
MS.gene009786.t1 AT1G64910 23.111 450 280 18 10 429 6 419 1.06e-17 85.5
MS.gene009786.t1 AT2G22590 22.453 481 307 18 10 450 15 469 5.39e-16 80.5
MS.gene009786.t1 AT4G27570 22.013 477 315 16 10 460 7 452 1.66e-14 75.9
MS.gene009786.t1 AT1G64920 22.124 452 284 20 10 428 6 422 8.00e-14 73.6
MS.gene009786.t1 AT1G50580 20.961 458 315 12 10 446 6 437 1.81e-13 72.8
MS.gene009786.t1 AT2G22930 21.109 469 306 19 10 451 6 437 7.02e-13 70.9
MS.gene009786.t1 AT4G27560 21.369 482 299 18 10 452 7 447 9.13e-13 70.5
MS.gene009786.t1 AT3G29630 21.525 446 293 16 10 428 6 421 1.32e-12 70.1
MS.gene009786.t1 AT5G54060 22.293 471 316 18 11 452 14 463 1.73e-12 69.7

Find 112 sgRNAs with CRISPR-Local

Find 176 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAAAGGAAGGTGTTATTTC+TGG 0.162724 5.3:+57503669 MS.gene009786:CDS
AATGGTTGGTCCAAATTTAT+TGG 0.182855 5.3:-57503711 None:intergenic
ATTCTTCTGTTGGTGGATTT+TGG 0.192409 5.3:+57503625 MS.gene009786:CDS
AGATGTTAAGGGAGATATTT+TGG 0.207711 5.3:+57503785 MS.gene009786:CDS
GTGACCTTACAAGGGATATT+AGG 0.211375 5.3:+57503859 MS.gene009786:CDS
AAAGTTGGTGTGTGAATTTA+TGG 0.216402 5.3:+57503827 MS.gene009786:CDS
ACTATCATCTTACTATTAAA+TGG 0.227718 5.3:-57503729 None:intergenic
AACAAGGATGTTATTGTTCT+TGG 0.238578 5.3:-57501847 None:intergenic
GAGAGTGAAGGAAGATGTTA+AGG 0.271637 5.3:+57503773 MS.gene009786:CDS
GGGTTGATGTGGCCTCTTCC+AGG 0.271732 5.3:-57501795 None:intergenic
AAGCTGATGTTGTCGGGTTT+TGG 0.282585 5.3:-57501915 None:intergenic
CACTACCCTCTGCGAAATTC+AGG 0.303972 5.3:+57502209 MS.gene009786:CDS
ATATTCCGGTAGCGTCGTTT+TGG 0.312238 5.3:+57502126 MS.gene009786:CDS
CTATTTGTAGTGTTTGGTTT+GGG 0.335355 5.3:-57503375 None:intergenic
TCGCGACCACCCTGCCTTCA+TGG 0.347113 5.3:+57501980 MS.gene009786:CDS
ATAGTTGAGGATTTGAAGAT+TGG 0.347421 5.3:+57503747 MS.gene009786:CDS
CGGCTACTATCATCGTTTAG+AGG 0.349069 5.3:-57503168 None:intergenic
ATGTAGCTATTTGTAGTGTT+TGG 0.351380 5.3:-57503381 None:intergenic
AGTATGTGGTTGAAGGAATT+TGG 0.352116 5.3:-57501759 None:intergenic
GTAGGACCGATGGTGTAAAT+TGG 0.361919 5.3:-57503321 None:intergenic
TTAATATAGTATGGTATTGT+AGG 0.379162 5.3:-57503339 None:intergenic
GCTATTTGTAGTGTTTGGTT+TGG 0.380599 5.3:-57503376 None:intergenic
TTTCCCTAATATCCCTTGTA+AGG 0.381935 5.3:-57503863 None:intergenic
CACAATCTGTTGGAACAAAA+TGG 0.384606 5.3:+57502185 MS.gene009786:CDS
TGACCTTACAAGGGATATTA+GGG 0.386233 5.3:+57503860 MS.gene009786:CDS
CAAAGGAAGGTGTTATTTCT+GGG 0.400581 5.3:+57503670 MS.gene009786:CDS
ATATGATACTATGTTGTATT+GGG 0.404560 5.3:+57502079 MS.gene009786:CDS
GTCGCGACCGCGAATGAGTT+CGG 0.418146 5.3:-57501964 None:intergenic
GAAATTTGAAATTGTAAAGT+TGG 0.423128 5.3:+57503812 MS.gene009786:CDS
TATATGATACTATGTTGTAT+TGG 0.423767 5.3:+57502078 MS.gene009786:CDS
GAACGAGTAAGTTATATTCC+TGG 0.427921 5.3:+57503117 MS.gene009786:CDS
GAACGGAAGCTGATGTTGTC+GGG 0.432318 5.3:-57501921 None:intergenic
CAAGGTTGAAAGAAATTTGT+GGG 0.433196 5.3:+57503553 MS.gene009786:CDS
TTTGCATTATTCGCTTGCTT+CGG 0.436391 5.3:-57503188 None:intergenic
CCTTTGTTGTCACGGAAGAA+TGG 0.443093 5.3:+57501871 MS.gene009786:CDS
CATTACTATGTCACTAATGA+AGG 0.461203 5.3:-57503958 None:intergenic
TGGTCAAGTAATTCCTCAAA+GGG 0.462712 5.3:-57502029 None:intergenic
CGGAAATCGAAGGAATATTC+CGG 0.466228 5.3:+57502112 MS.gene009786:CDS
TTGAAGGAGGTTTATCAAGT+TGG 0.470319 5.3:-57502049 None:intergenic
ACCGATGGTGTAAATTGGTA+AGG 0.472721 5.3:-57503316 None:intergenic
AATGTGACAACACTCTCAAT+TGG 0.474430 5.3:-57503605 None:intergenic
AGAGTGAAGGAAGATGTTAA+GGG 0.476102 5.3:+57503774 MS.gene009786:CDS
AATTTGTGGGCACATGGGAT+TGG 0.477446 5.3:+57503566 MS.gene009786:CDS
CACAGTACACACATGCTTGA+AGG 0.478996 5.3:+57503988 MS.gene009786:CDS
ATGTGGCCTCTTCCAGGGTA+AGG 0.479755 5.3:-57501789 None:intergenic
TTGTCACATTCTTCTGTTGG+TGG 0.486010 5.3:+57503618 MS.gene009786:CDS
AGGCGCGTTGAGGAAATTCC+AGG 0.489830 5.3:-57503135 None:intergenic
ATAATGCAAATGACTTTGAA+AGG 0.492528 5.3:+57503201 MS.gene009786:CDS
GAAAGAAATTTGTGGGCACA+TGG 0.495955 5.3:+57503560 MS.gene009786:CDS
CATAGCTAGTATGTGGTTGA+AGG 0.499893 5.3:-57501766 None:intergenic
ACAAGGTTGAAAGAAATTTG+TGG 0.500800 5.3:+57503552 MS.gene009786:CDS
ATTATAGCTTCCATGAAGGC+AGG 0.505334 5.3:-57501990 None:intergenic
AGTTCGGAAGGAACAACATT+GGG 0.507150 5.3:-57501948 None:intergenic
AAGATATGTGGTGATGCAAT+TGG 0.512128 5.3:+57503903 MS.gene009786:CDS
GAAGATTGGGTTGAGAGTGA+AGG 0.515549 5.3:+57503761 MS.gene009786:CDS
TCATCTTACTATTAAATGGT+TGG 0.515586 5.3:-57503725 None:intergenic
GTTCCTTCCGAACTCATTCG+CGG 0.516554 5.3:+57501957 MS.gene009786:CDS
CCCTTACCAATTTACACCAT+CGG 0.522509 5.3:+57503315 MS.gene009786:CDS
GAGCTTGCATAGATTCATCA+TGG 0.524269 5.3:-57501817 None:intergenic
GTGTTGTCACATTCTTCTGT+TGG 0.525846 5.3:+57503615 MS.gene009786:CDS
TCTCTTACACCACAATCTGT+TGG 0.527727 5.3:+57502175 MS.gene009786:CDS
ATTGTCCAAAACGACGCTAC+CGG 0.527945 5.3:-57502131 None:intergenic
AAGGATGGAAGAACCCTTTG+AGG 0.530840 5.3:+57502016 MS.gene009786:CDS
GGCTACTATCATCGTTTAGA+GGG 0.532751 5.3:-57503167 None:intergenic
TTGGTCAAGTAATTCCTCAA+AGG 0.532856 5.3:-57502030 None:intergenic
CGAACGGAAGCTGATGTTGT+CGG 0.535940 5.3:-57501922 None:intergenic
TAGTTGAGGATTTGAAGATT+GGG 0.537057 5.3:+57503748 MS.gene009786:CDS
GGAAGCTATAATGACAAGGA+TGG 0.541728 5.3:+57502001 MS.gene009786:CDS
GGTTGATGTGGCCTCTTCCA+GGG 0.544283 5.3:-57501794 None:intergenic
TGGCTTGATTCACAACCCAT+TGG 0.545647 5.3:+57503408 MS.gene009786:CDS
GTATCATATACAATCATTGA+AGG 0.554740 5.3:-57502065 None:intergenic
CCTTGTTACCTTTGTTGTCA+CGG 0.554764 5.3:+57501863 MS.gene009786:CDS
TATGTAAAGAACAGAACCAA+TGG 0.556286 5.3:-57503424 None:intergenic
ATGTAAAGAACAGAACCAAT+GGG 0.557405 5.3:-57503423 None:intergenic
TAATAGTAAGATGATAGTTG+AGG 0.559789 5.3:+57503734 MS.gene009786:CDS
AGCTTGCATAGATTCATCAT+GGG 0.562442 5.3:-57501816 None:intergenic
CCGATGGTGTAAATTGGTAA+GGG 0.569644 5.3:-57503315 None:intergenic
GGTGATGCAATTGGCAATGG+TGG 0.574139 5.3:+57503912 MS.gene009786:CDS
GATTCATCATGGGGTTGATG+TGG 0.575044 5.3:-57501806 None:intergenic
CGTTTAGAGGGAAATCAGCT+AGG 0.577614 5.3:-57503155 None:intergenic
TGTCATTATAGCTTCCATGA+AGG 0.584498 5.3:-57501994 None:intergenic
TGTTATTGTTCTTGGAGACA+AGG 0.586183 5.3:-57501839 None:intergenic
TAGCTCGTGGAGAAGTTACA+AGG 0.597310 5.3:+57503535 MS.gene009786:CDS
TTGTATTGGGCTGTTGTCGT+CGG 0.600170 5.3:+57502092 MS.gene009786:CDS
CCGTGACAACAAAGGTAACA+AGG 0.601448 5.3:-57501863 None:intergenic
GTGATGCAATTGGCAATGGT+GGG 0.603212 5.3:+57503913 MS.gene009786:CDS
CCATTCTTCCGTGACAACAA+AGG 0.603720 5.3:-57501871 None:intergenic
ATGTGGTTGAAGGAATTTGG+TGG 0.604904 5.3:-57501756 None:intergenic
CGATGGTGTAAATTGGTAAG+GGG 0.605335 5.3:-57503314 None:intergenic
GTATGGTATTGTAGGACCGA+TGG 0.606979 5.3:-57503331 None:intergenic
GGTTGGAATTCTACAAAGGA+AGG 0.607330 5.3:+57503657 MS.gene009786:CDS
GGTAAGGCATAGCTAGTATG+TGG 0.611047 5.3:-57501773 None:intergenic
CGACCGCGAATGAGTTCGGA+AGG 0.611500 5.3:-57501960 None:intergenic
GAAATCAGCTAGGCGCGTTG+AGG 0.614370 5.3:-57503145 None:intergenic
GCTATGCCTTACCCTGGAAG+AGG 0.616020 5.3:+57501783 MS.gene009786:CDS
GTTTACCTGAATTTCGCAGA+GGG 0.618297 5.3:-57502214 None:intergenic
AAAGAAATTTGTGGGCACAT+GGG 0.625283 5.3:+57503561 MS.gene009786:CDS
GAGTTCGGAAGGAACAACAT+TGG 0.625656 5.3:-57501949 None:intergenic
CTGTTGTCGTCGGAAATCGA+AGG 0.626762 5.3:+57502102 MS.gene009786:CDS
CTACAAATAGCTACATTGAG+TGG 0.628002 5.3:+57503388 MS.gene009786:CDS
TCATATACAATCATTGAAGG+AGG 0.632422 5.3:-57502062 None:intergenic
AAAGGAAGGTGTTATTTCTG+GGG 0.633247 5.3:+57503671 MS.gene009786:CDS
TTATAGCTTCCATGAAGGCA+GGG 0.640476 5.3:-57501989 None:intergenic
GAACAACATTGGGTATCGAA+CGG 0.643287 5.3:-57501938 None:intergenic
TGTGGTGATGCAATTGGCAA+TGG 0.647878 5.3:+57503909 MS.gene009786:CDS
GCTTGCATAGATTCATCATG+GGG 0.655176 5.3:-57501815 None:intergenic
CTGTGGTTGGAATTCTACAA+AGG 0.655583 5.3:+57503653 MS.gene009786:CDS
ATACTAGCTATGCCTTACCC+TGG 0.659035 5.3:+57501777 MS.gene009786:CDS
TCTGTTCTTTACATAGCACA+AGG 0.659909 5.3:+57503432 MS.gene009786:CDS
TCATGGAAGCTATAATGACA+AGG 0.676638 5.3:+57501997 MS.gene009786:CDS
TGTTTACCTGAATTTCGCAG+AGG 0.678782 5.3:-57502215 None:intergenic
TAGCTTCCATGAAGGCAGGG+TGG 0.727043 5.3:-57501986 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTCTTCTATAATTTATTTAT+GGG + chr5.3:57502270-57502289 MS.gene009786:intron 10.0%
!!! CTTGATATTATTTTAAAATT+GGG + chr5.3:57502904-57502923 MS.gene009786:intron 10.0%
!!! TCTTGATATTATTTTAAAAT+TGG + chr5.3:57502903-57502922 MS.gene009786:intron 10.0%
!!! TTTTTAAGATTAATATAGTA+TGG - chr5.3:57503351-57503370 None:intergenic 10.0%
!! GTTCTTCTATAATTTATTTA+TGG + chr5.3:57502269-57502288 MS.gene009786:intron 15.0%
!! TAAAATAATATCAAGAAGTA+TGG - chr5.3:57502899-57502918 None:intergenic 15.0%
!! TTTATTGGAAAAGTTAAAAA+AGG - chr5.3:57503699-57503718 None:intergenic 15.0%
!!! CATTTTCCTTTATTTATTTA+TGG + chr5.3:57502458-57502477 MS.gene009786:intron 15.0%
!!! TATTTTTTTGTCTATAATTG+TGG - chr5.3:57502867-57502886 None:intergenic 15.0%
!!! TTTAACTTTTCCAATAAATT+TGG + chr5.3:57503701-57503720 MS.gene009786:CDS 15.0%
!! ACTATCATCTTACTATTAAA+TGG - chr5.3:57503732-57503751 None:intergenic 20.0%
!! ATATGATACTATGTTGTATT+GGG + chr5.3:57502079-57502098 MS.gene009786:CDS 20.0%
!! ATTGCTCCATAAATAAATAA+AGG - chr5.3:57502467-57502486 None:intergenic 20.0%
!! TAAAAAGTGGTGTAATAATT+AGG - chr5.3:57502384-57502403 None:intergenic 20.0%
!! TATATGATACTATGTTGTAT+TGG + chr5.3:57502078-57502097 MS.gene009786:CDS 20.0%
!! TATTTAATGATCACATCATA+CGG - chr5.3:57502701-57502720 None:intergenic 20.0%
!! TTAATATAGTATGGTATTGT+AGG - chr5.3:57503342-57503361 None:intergenic 20.0%
!!! AAAGCAATGTTAGATTTTTA+TGG + chr5.3:57503511-57503530 MS.gene009786:CDS 20.0%
!!! AAGCAATGTTAGATTTTTAT+GGG + chr5.3:57503512-57503531 MS.gene009786:CDS 20.0%
!!! CATTAAATAGAAATGCATTT+TGG + chr5.3:57502712-57502731 MS.gene009786:intron 20.0%
!!! GAAATTTGAAATTGTAAAGT+TGG + chr5.3:57503812-57503831 MS.gene009786:CDS 20.0%
!!! GGTAAGTTTTTATTAAAAAG+TGG - chr5.3:57502397-57502416 None:intergenic 20.0%
!!! TGTATAGAAAGCATTATTAA+AGG + chr5.3:57502659-57502678 MS.gene009786:intron 20.0%
!!! TTGTAAATTTGCTTCTAAAT+CGG - chr5.3:57502563-57502582 None:intergenic 20.0%
! AGAAAGTTCAAAAAGATATG+TGG + chr5.3:57503891-57503910 MS.gene009786:CDS 25.0%
! ATAATGCAAATGACTTTGAA+AGG + chr5.3:57503201-57503220 MS.gene009786:CDS 25.0%
! ATTGGTTAAGCAATTAAAAG+AGG - chr5.3:57502418-57502437 None:intergenic 25.0%
! CAAAAGTAGAAAAATTGTCT+TGG + chr5.3:57502333-57502352 MS.gene009786:intron 25.0%
! CATCGAATATGAATATGTAA+CGG + chr5.3:57502491-57502510 MS.gene009786:intron 25.0%
! GTATCATATACAATCATTGA+AGG - chr5.3:57502068-57502087 None:intergenic 25.0%
! GTTAACAGTAATTCGAATAA+TGG - chr5.3:57502993-57503012 None:intergenic 25.0%
! TAATAGTAAGATGATAGTTG+AGG + chr5.3:57503734-57503753 MS.gene009786:CDS 25.0%
! TCATCTTACTATTAAATGGT+TGG - chr5.3:57503728-57503747 None:intergenic 25.0%
!! AAATAGAAATGCATTTTGGA+GGG + chr5.3:57502716-57502735 MS.gene009786:intron 25.0%
!! CAAGACAATTTTTCTACTTT+TGG - chr5.3:57502335-57502354 None:intergenic 25.0%
!! TAAATAGAAATGCATTTTGG+AGG + chr5.3:57502715-57502734 MS.gene009786:intron 25.0%
!!! ATATGTTCATTGCTATTTGT+TGG - chr5.3:57502244-57502263 None:intergenic 25.0%
!!! TTTCGTTTTTAAGGTATCAA+TGG - chr5.3:57503292-57503311 None:intergenic 25.0%
AACAAGGATGTTATTGTTCT+TGG - chr5.3:57501850-57501869 None:intergenic 30.0%
ACAAGGTTGAAAGAAATTTG+TGG + chr5.3:57503552-57503571 MS.gene009786:CDS 30.0%
ATAGTTGAGGATTTGAAGAT+TGG + chr5.3:57503747-57503766 MS.gene009786:CDS 30.0%
ATGTAAAGAACAGAACCAAT+GGG - chr5.3:57503426-57503445 None:intergenic 30.0%
ATGTAGCTATTTGTAGTGTT+TGG - chr5.3:57503384-57503403 None:intergenic 30.0%
ATTAGCAACTAGCAGTTTAA+AGG - chr5.3:57502590-57502609 None:intergenic 30.0%
CAAGGTTGAAAGAAATTTGT+GGG + chr5.3:57503553-57503572 MS.gene009786:CDS 30.0%
CATTACTATGTCACTAATGA+AGG - chr5.3:57503961-57503980 None:intergenic 30.0%
TAGTTGAGGATTTGAAGATT+GGG + chr5.3:57503748-57503767 MS.gene009786:CDS 30.0%
TATGTAAAGAACAGAACCAA+TGG - chr5.3:57503427-57503446 None:intergenic 30.0%
TCATATACAATCATTGAAGG+AGG - chr5.3:57502065-57502084 None:intergenic 30.0%
! AATGGTTGGTCCAAATTTAT+TGG - chr5.3:57503714-57503733 None:intergenic 30.0%
! AGATGTTAAGGGAGATATTT+TGG + chr5.3:57503785-57503804 MS.gene009786:CDS 30.0%
! CTATTTGTAGTGTTTGGTTT+GGG - chr5.3:57503378-57503397 None:intergenic 30.0%
!! AAAGTTGGTGTGTGAATTTA+TGG + chr5.3:57503827-57503846 MS.gene009786:CDS 30.0%
!! TGACTTTGAAAGGTTTTCAA+TGG + chr5.3:57503211-57503230 MS.gene009786:CDS 30.0%
!!! ATTTTGATAGTGACCTTACA+AGG + chr5.3:57503850-57503869 MS.gene009786:CDS 30.0%
!!! TTTTGATAGTGACCTTACAA+GGG + chr5.3:57503851-57503870 MS.gene009786:CDS 30.0%
AAAGAAATTTGTGGGCACAT+GGG + chr5.3:57503561-57503580 MS.gene009786:CDS 35.0%
AATGTGACAACACTCTCAAT+TGG - chr5.3:57503608-57503627 None:intergenic 35.0%
AGAGTGAAGGAAGATGTTAA+GGG + chr5.3:57503774-57503793 MS.gene009786:CDS 35.0%
AGCTTGCATAGATTCATCAT+GGG - chr5.3:57501819-57501838 None:intergenic 35.0%
AGTATGTGGTTGAAGGAATT+TGG - chr5.3:57501762-57501781 None:intergenic 35.0%
CACAATCTGTTGGAACAAAA+TGG + chr5.3:57502185-57502204 MS.gene009786:CDS 35.0%
CATTCACTGTTAAGATGCTT+TGG + chr5.3:57502948-57502967 MS.gene009786:intron 35.0%
CTACAAATAGCTACATTGAG+TGG + chr5.3:57503388-57503407 MS.gene009786:CDS 35.0%
GAACGAGTAAGTTATATTCC+TGG + chr5.3:57503117-57503136 MS.gene009786:CDS 35.0%
GCTATTTGTAGTGTTTGGTT+TGG - chr5.3:57503379-57503398 None:intergenic 35.0%
TAGTGATGCAATGCAGAAAA+TGG + chr5.3:57503090-57503109 MS.gene009786:intron 35.0%
TCATGGAAGCTATAATGACA+AGG + chr5.3:57501997-57502016 MS.gene009786:CDS 35.0%
TCTGTTCTTTACATAGCACA+AGG + chr5.3:57503432-57503451 MS.gene009786:CDS 35.0%
TGACCTTACAAGGGATATTA+GGG + chr5.3:57503860-57503879 MS.gene009786:CDS 35.0%
TGGTCAAGTAATTCCTCAAA+GGG - chr5.3:57502032-57502051 None:intergenic 35.0%
TGTCATTATAGCTTCCATGA+AGG - chr5.3:57501997-57502016 None:intergenic 35.0%
TGTTATTGTTCTTGGAGACA+AGG - chr5.3:57501842-57501861 None:intergenic 35.0%
TTGAAGGAGGTTTATCAAGT+TGG - chr5.3:57502052-57502071 None:intergenic 35.0%
TTGGTCAAGTAATTCCTCAA+AGG - chr5.3:57502033-57502052 None:intergenic 35.0%
TTTCCCTAATATCCCTTGTA+AGG - chr5.3:57503866-57503885 None:intergenic 35.0%
TTTGCATTATTCGCTTGCTT+CGG - chr5.3:57503191-57503210 None:intergenic 35.0%
! AAGATATGTGGTGATGCAAT+TGG + chr5.3:57503903-57503922 MS.gene009786:CDS 35.0%
! CATTTTGTTCCAACAGATTG+TGG - chr5.3:57502187-57502206 None:intergenic 35.0%
!! AAAGGAAGGTGTTATTTCTG+GGG + chr5.3:57503671-57503690 MS.gene009786:CDS 35.0%
!! ACAAAGGAAGGTGTTATTTC+TGG + chr5.3:57503669-57503688 MS.gene009786:CDS 35.0%
!! CAAAGGAAGGTGTTATTTCT+GGG + chr5.3:57503670-57503689 MS.gene009786:CDS 35.0%
!! TAAGGGGAGTTTCGTTTTTA+AGG - chr5.3:57503301-57503320 None:intergenic 35.0%
!!! ACATGGGATTGGTTTTAGAA+TGG + chr5.3:57503577-57503596 MS.gene009786:CDS 35.0%
!!! ATTCTTCTGTTGGTGGATTT+TGG + chr5.3:57503625-57503644 MS.gene009786:CDS 35.0%
ACCGATGGTGTAAATTGGTA+AGG - chr5.3:57503319-57503338 None:intergenic 40.0%
AGTTCGGAAGGAACAACATT+GGG - chr5.3:57501951-57501970 None:intergenic 40.0%
ATGTGGTTGAAGGAATTTGG+TGG - chr5.3:57501759-57501778 None:intergenic 40.0%
ATTATAGCTTCCATGAAGGC+AGG - chr5.3:57501993-57502012 None:intergenic 40.0%
CATAGCTAGTATGTGGTTGA+AGG - chr5.3:57501769-57501788 None:intergenic 40.0%
CCCTTACCAATTTACACCAT+CGG + chr5.3:57503315-57503334 MS.gene009786:CDS 40.0%
CCGATGGTGTAAATTGGTAA+GGG - chr5.3:57503318-57503337 None:intergenic 40.0%
CGATGGTGTAAATTGGTAAG+GGG - chr5.3:57503317-57503336 None:intergenic 40.0%
CGGAAATCGAAGGAATATTC+CGG + chr5.3:57502112-57502131 MS.gene009786:CDS 40.0%
CTGTGGTTGGAATTCTACAA+AGG + chr5.3:57503653-57503672 MS.gene009786:CDS 40.0%
GAAAGAAATTTGTGGGCACA+TGG + chr5.3:57503560-57503579 MS.gene009786:CDS 40.0%
GAGAGTGAAGGAAGATGTTA+AGG + chr5.3:57503773-57503792 MS.gene009786:CDS 40.0%
GAGCTTGCATAGATTCATCA+TGG - chr5.3:57501820-57501839 None:intergenic 40.0%
GCTTGCATAGATTCATCATG+GGG - chr5.3:57501818-57501837 None:intergenic 40.0%
GGAAGCTATAATGACAAGGA+TGG + chr5.3:57502001-57502020 MS.gene009786:CDS 40.0%
GGCTACTATCATCGTTTAGA+GGG - chr5.3:57503170-57503189 None:intergenic 40.0%
GGTTGGAATTCTACAAAGGA+AGG + chr5.3:57503657-57503676 MS.gene009786:CDS 40.0%
GTGACCTTACAAGGGATATT+AGG + chr5.3:57503859-57503878 MS.gene009786:CDS 40.0%
GTGTTGTCACATTCTTCTGT+TGG + chr5.3:57503615-57503634 MS.gene009786:CDS 40.0%
GTTTACCTGAATTTCGCAGA+GGG - chr5.3:57502217-57502236 None:intergenic 40.0%
TAATTGCTTAACCAATGCCC+CGG + chr5.3:57502422-57502441 MS.gene009786:intron 40.0%
TCTCTTACACCACAATCTGT+TGG + chr5.3:57502175-57502194 MS.gene009786:CDS 40.0%
TGTTTACCTGAATTTCGCAG+AGG - chr5.3:57502218-57502237 None:intergenic 40.0%
TTATAGCTTCCATGAAGGCA+GGG - chr5.3:57501992-57502011 None:intergenic 40.0%
TTGTCACATTCTTCTGTTGG+TGG + chr5.3:57503618-57503637 MS.gene009786:CDS 40.0%
! AGATTTTTATGGGTAGCTCG+TGG + chr5.3:57503522-57503541 MS.gene009786:CDS 40.0%
! CCTTGTTACCTTTGTTGTCA+CGG + chr5.3:57501863-57501882 MS.gene009786:CDS 40.0%
!! AGAAATGCATTTTGGAGGGT+TGG + chr5.3:57502720-57502739 MS.gene009786:intron 40.0%
!! GAAATGCATTTTGGAGGGTT+GGG + chr5.3:57502721-57502740 MS.gene009786:intron 40.0%
!! GAACAACATTGGGTATCGAA+CGG - chr5.3:57501941-57501960 None:intergenic 40.0%
AAAATGTTAACCAGTGCCCC+CGG - chr5.3:57502444-57502463 None:intergenic 45.0%
AAGGATGGAAGAACCCTTTG+AGG + chr5.3:57502016-57502035 MS.gene009786:CDS 45.0%
AATTGCTTAACCAATGCCCC+GGG + chr5.3:57502423-57502442 MS.gene009786:intron 45.0%
AATTTGTGGGCACATGGGAT+TGG + chr5.3:57503566-57503585 MS.gene009786:CDS 45.0%
ATACTAGCTATGCCTTACCC+TGG + chr5.3:57501777-57501796 MS.gene009786:CDS 45.0%
ATTGTCCAAAACGACGCTAC+CGG - chr5.3:57502134-57502153 None:intergenic 45.0%
CCATTCTTCCGTGACAACAA+AGG - chr5.3:57501874-57501893 None:intergenic 45.0%
CCGTGACAACAAAGGTAACA+AGG - chr5.3:57501866-57501885 None:intergenic 45.0%
CGGCTACTATCATCGTTTAG+AGG - chr5.3:57503171-57503190 None:intergenic 45.0%
CGTTTAGAGGGAAATCAGCT+AGG - chr5.3:57503158-57503177 None:intergenic 45.0%
GAGTTCGGAAGGAACAACAT+TGG - chr5.3:57501952-57501971 None:intergenic 45.0%
GGTAAGGCATAGCTAGTATG+TGG - chr5.3:57501776-57501795 None:intergenic 45.0%
GTAGGACCGATGGTGTAAAT+TGG - chr5.3:57503324-57503343 None:intergenic 45.0%
GTATGGTATTGTAGGACCGA+TGG - chr5.3:57503334-57503353 None:intergenic 45.0%
GTGATGCAATTGGCAATGGT+GGG + chr5.3:57503913-57503932 MS.gene009786:CDS 45.0%
TAGCTCGTGGAGAAGTTACA+AGG + chr5.3:57503535-57503554 MS.gene009786:CDS 45.0%
TGGCTTGATTCACAACCCAT+TGG + chr5.3:57503408-57503427 MS.gene009786:CDS 45.0%
TTGTATTGGGCTGTTGTCGT+CGG + chr5.3:57502092-57502111 MS.gene009786:CDS 45.0%
! AAGCTGATGTTGTCGGGTTT+TGG - chr5.3:57501918-57501937 None:intergenic 45.0%
! ATATTCCGGTAGCGTCGTTT+TGG + chr5.3:57502126-57502145 MS.gene009786:CDS 45.0%
! CCTTTGTTGTCACGGAAGAA+TGG + chr5.3:57501871-57501890 MS.gene009786:CDS 45.0%
! TGTGGTGATGCAATTGGCAA+TGG + chr5.3:57503909-57503928 MS.gene009786:CDS 45.0%
!! GAAGATTGGGTTGAGAGTGA+AGG + chr5.3:57503761-57503780 MS.gene009786:CDS 45.0%
!! GATTCATCATGGGGTTGATG+TGG - chr5.3:57501809-57501828 None:intergenic 45.0%
!! GATTTTGGTCACACTGTGGT+TGG + chr5.3:57503640-57503659 MS.gene009786:CDS 45.0%
!! TTTTGGAGGGTTGGGTAGAA+AGG + chr5.3:57502729-57502748 MS.gene009786:intron 45.0%
!!! TTATTTTTATAATAATGTAA+TGG + chr5.3:57503032-57503051 MS.gene009786:intron 5.0%
AAATGTTAACCAGTGCCCCC+GGG - chr5.3:57502443-57502462 None:intergenic 50.0%
ATTGCTTAACCAATGCCCCG+GGG + chr5.3:57502424-57502443 MS.gene009786:intron 50.0%
CACTACCCTCTGCGAAATTC+AGG + chr5.3:57502209-57502228 MS.gene009786:CDS 50.0%
CGAACGGAAGCTGATGTTGT+CGG - chr5.3:57501925-57501944 None:intergenic 50.0%
CTGTTGTCGTCGGAAATCGA+AGG + chr5.3:57502102-57502121 MS.gene009786:CDS 50.0%
GAACGGAAGCTGATGTTGTC+GGG - chr5.3:57501924-57501943 None:intergenic 50.0%
GGTGATGCAATTGGCAATGG+TGG + chr5.3:57503912-57503931 MS.gene009786:CDS 50.0%
GTTCCTTCCGAACTCATTCG+CGG + chr5.3:57501957-57501976 MS.gene009786:CDS 50.0%
!! GGTGGATTTTGGTCACACTG+TGG + chr5.3:57503636-57503655 MS.gene009786:CDS 50.0%
!!! GTTGTCGGGTTTTGGTTCAG+AGG - chr5.3:57501910-57501929 None:intergenic 50.0%
AATGTTAACCAGTGCCCCCG+GGG - chr5.3:57502442-57502461 None:intergenic 55.0%
AGGCGCGTTGAGGAAATTCC+AGG - chr5.3:57503138-57503157 None:intergenic 55.0%
ATGTGGCCTCTTCCAGGGTA+AGG - chr5.3:57501792-57501811 None:intergenic 55.0%
ATTCCTTAACCAGTGCCCCG+GGG - chr5.3:57502312-57502331 None:intergenic 55.0%
GAAATCAGCTAGGCGCGTTG+AGG - chr5.3:57503148-57503167 None:intergenic 55.0%
GATTCCTTAACCAGTGCCCC+GGG - chr5.3:57502313-57502332 None:intergenic 55.0%
GCTATGCCTTACCCTGGAAG+AGG + chr5.3:57501783-57501802 MS.gene009786:CDS 55.0%
GGATTCCTTAACCAGTGCCC+CGG - chr5.3:57502314-57502333 None:intergenic 55.0%
TAGCTTCCATGAAGGCAGGG+TGG - chr5.3:57501989-57502008 None:intergenic 55.0%
TCTTGTTAACCAGTGCCCCC+GGG + chr5.3:57502293-57502312 MS.gene009786:intron 55.0%
TTGCTTAACCAATGCCCCGG+GGG + chr5.3:57502425-57502444 MS.gene009786:intron 55.0%
! GGTTGATGTGGCCTCTTCCA+GGG - chr5.3:57501797-57501816 None:intergenic 55.0%
! GTCTTGTTAACCAGTGCCCC+CGG + chr5.3:57502292-57502311 MS.gene009786:intron 55.0%
CGACCGCGAATGAGTTCGGA+AGG - chr5.3:57501963-57501982 None:intergenic 60.0%
CTTGTTAACCAGTGCCCCCG+GGG + chr5.3:57502294-57502313 MS.gene009786:intron 60.0%
GTCGCGACCGCGAATGAGTT+CGG - chr5.3:57501967-57501986 None:intergenic 60.0%
TTCCTTAACCAGTGCCCCGG+GGG - chr5.3:57502311-57502330 None:intergenic 60.0%
!! GGGTTGATGTGGCCTCTTCC+AGG - chr5.3:57501798-57501817 None:intergenic 60.0%
TCGCGACCACCCTGCCTTCA+TGG + chr5.3:57501980-57501999 MS.gene009786:CDS 65.0%
AACCAGTGCCCCCGGGGCAT+TGG - chr5.3:57502436-57502455 None:intergenic 70.0%
! AACCAATGCCCCGGGGGCAC+TGG + chr5.3:57502431-57502450 MS.gene009786:intron 70.0%
!! TGCCCCCGGGGCACTGGTTA+AGG + chr5.3:57502306-57502325 MS.gene009786:intron 70.0%
AACCAGTGCCCCCGGGGCAC+TGG + chr5.3:57502300-57502319 MS.gene009786:intron 75.0%
! AACCAGTGCCCCGGGGGCAC+TGG - chr5.3:57502305-57502324 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 57501747 57504007 57501747 ID=MS.gene009786
chr5.3 mRNA 57501747 57504007 57501747 ID=MS.gene009786.t1;Parent=MS.gene009786
chr5.3 exon 57501747 57502230 57501747 ID=MS.gene009786.t1.exon1;Parent=MS.gene009786.t1
chr5.3 CDS 57501747 57502230 57501747 ID=cds.MS.gene009786.t1;Parent=MS.gene009786.t1
chr5.3 exon 57503106 57504007 57503106 ID=MS.gene009786.t1.exon2;Parent=MS.gene009786.t1
chr5.3 CDS 57503106 57504007 57503106 ID=cds.MS.gene009786.t1;Parent=MS.gene009786.t1
Gene Sequence

>MS.gene009786

ATGGAATCACCACCAAATTCCTTCAACCACATACTAGCTATGCCTTACCCTGGAAGAGGCCACATCAACCCCATGATGAATCTATGCAAGCTCCTTGTCTCCAAGAACAATAACATCCTTGTTACCTTTGTTGTCACGGAAGAATGGCTAAGCTTAATATCCTCTGAACCAAAACCCGACAACATCAGCTTCCGTTCGATACCCAATGTTGTTCCTTCCGAACTCATTCGCGGTCGCGACCACCCTGCCTTCATGGAAGCTATAATGACAAGGATGGAAGAACCCTTTGAGGAATTACTTGACCAACTTGATAAACCTCCTTCAATGATTGTATATGATACTATGTTGTATTGGGCTGTTGTCGTCGGAAATCGAAGGAATATTCCGGTAGCGTCGTTTTGGACAATGTCTGCTTCGTTTTTCTCTGTTCTCTTACACCACAATCTGTTGGAACAAAATGGTCACTACCCTCTGCGAAATTCAGGTAAACAAAACCAACAAATAGCAATGAACATATCTCAAGTTCTTCTATAATTTATTTATGGGTCTTGTTAACCAGTGCCCCCGGGGCACTGGTTAAGGAATCCAAAAGTAGAAAAATTGTCTTGGAAATATAATCTGTTACTTTTGACTACCTAATTATTACACCACTTTTTAATAAAAACTTACCTCTTTTAATTGCTTAACCAATGCCCCGGGGGCACTGGTTAACATTTTCCTTTATTTATTTATGGAGCAATTTAACATCGAATATGAATATGTAACGGTCAATTTAGAAACTGATTTCTAAATCGATTGTGAATGAGTTTGCAACCGATTTAGAAGCAAATTTACAAAAAGCCTTTAAACTGCTAGTTGCTAATATAAACAACTCATTTTTCATTTTTAGTCTCTAAATTATATAGCAAAATTTGTATAGAAAGCATTATTAAAGGCATATCAATACATTATCCGTATGATGTGATCATTAAATAGAAATGCATTTTGGAGGGTTGGGTAGAAAGGAGAAAAAAAATACAAGCATAACAATTAATATAGTAACATTTGTACTTCAAAAAATGATTTTTTTTATACTTCATTTTACAATTTGCATATTAGCAAAATGTTGAAATCATGACCACAATTATAGACAAAAAAATAAAATAATATCCATACTTCTTGATATTATTTTAAAATTGGGTGATATTAATTAAGTTCTCTGCATTCACTGTTAAGATGCTTTGGACTGTCGATCAATCAAAAACCATTATTCGAATTACTGTTAACTTGATATGTTGAAAGTTATTTATTTTTATAATAATGTAATGGTTATGATTGATTGATATGAATTAAATCATGAGATTTAGTGATGCAATGCAGAAAATGGTGATGAACGAGTAAGTTATATTCCTGGAATTTCCTCAACGCGCCTAGCTGATTTCCCTCTAAACGATGATAGTAGCCGAAGCAAGCGAATAATGCAAATGACTTTGAAAGGTTTTCAATGGATTCACAAAGCACAATATCTTCTATTCACTTCAATTTATGAGCTTGAATCTCAAGCCATTGATACCTTAAAAACGAAACTCCCCTTACCAATTTACACCATCGGTCCTACAATACCATACTATATTAATCTTAAAAACAATCCCAAACCAAACACTACAAATAGCTACATTGAGTGGCTTGATTCACAACCCATTGGTTCTGTTCTTTACATAGCACAAGGTAGTTTTCTCTCAGCTTCAAATGAACAAATTAATGAGATTGCAAATGCTGTGCGTGAAAGCAATGTTAGATTTTTATGGGTAGCTCGTGGAGAAGTTACAAGGTTGAAAGAAATTTGTGGGCACATGGGATTGGTTTTAGAATGGTGTGACCAATTGAGAGTGTTGTCACATTCTTCTGTTGGTGGATTTTGGTCACACTGTGGTTGGAATTCTACAAAGGAAGGTGTTATTTCTGGGGTACCTTTTTTAACTTTTCCAATAAATTTGGACCAACCATTTAATAGTAAGATGATAGTTGAGGATTTGAAGATTGGGTTGAGAGTGAAGGAAGATGTTAAGGGAGATATTTTGGTGAAGAAATTTGAAATTGTAAAGTTGGTGTGTGAATTTATGGATTTTGATAGTGACCTTACAAGGGATATTAGGGAAAAAAGTAGAAAGTTCAAAAAGATATGTGGTGATGCAATTGGCAATGGTGGGTCTGCTGATAATGATTTGAATGCCTTCATTAGTGACATAGTAATGCATTGTTCACAGTACACACATGCTTGA
Protein sequence

>MS.gene009786.t1

MESPPNSFNHILAMPYPGRGHINPMMNLCKLLVSKNNNILVTFVVTEEWLSLISSEPKPDNISFRSIPNVVPSELIRGRDHPAFMEAIMTRMEEPFEELLDQLDKPPSMIVYDTMLYWAVVVGNRRNIPVASFWTMSASFFSVLLHHNLLEQNGHYPLRNSENGDERVSYIPGISSTRLADFPLNDDSSRSKRIMQMTLKGFQWIHKAQYLLFTSIYELESQAIDTLKTKLPLPIYTIGPTIPYYINLKNNPKPNTTNSYIEWLDSQPIGSVLYIAQGSFLSASNEQINEIANAVRESNVRFLWVARGEVTRLKEICGHMGLVLEWCDQLRVLSHSSVGGFWSHCGWNSTKEGVISGVPFLTFPINLDQPFNSKMIVEDLKIGLRVKEDVKGDILVKKFEIVKLVCEFMDFDSDLTRDIREKSRKFKKICGDAIGNGGSADNDLNAFISDIVMHCSQYTHA