AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene048584

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene048584.t1 MTR_3g031450 93.118 465 32 0 1 465 1 465 0.0 898
MS.gene048584.t1 MTR_3g031400 86.538 468 55 3 1 465 1 463 0.0 836
MS.gene048584.t1 MTR_5g072860 53.173 457 184 8 18 452 18 466 1.76e-169 485
MS.gene048584.t1 MTR_5g075440 52.772 451 193 7 18 452 10 456 1.45e-158 457
MS.gene048584.t1 MTR_5g072810 49.443 449 205 10 18 451 12 453 3.47e-145 423
MS.gene048584.t1 MTR_5g072820 47.865 445 215 7 18 451 10 448 2.06e-140 410
MS.gene048584.t1 MTR_5g072840 47.416 445 217 7 18 451 10 448 1.24e-139 409
MS.gene048584.t1 MTR_5g072830 46.966 445 219 7 18 451 10 448 3.56e-138 405
MS.gene048584.t1 MTR_5g072850 45.055 455 177 10 9 458 2 388 9.55e-117 348
MS.gene048584.t1 MTR_8g083290 28.151 476 284 11 19 452 5 464 2.96e-59 201
MS.gene048584.t1 MTR_6g038300 31.140 456 283 15 18 452 11 456 1.32e-57 197
MS.gene048584.t1 MTR_6g038230 30.435 460 284 14 17 453 10 456 3.26e-56 193
MS.gene048584.t1 MTR_7g080950 31.938 454 281 13 16 451 4 447 5.28e-56 193
MS.gene048584.t1 MTR_3g008010 29.012 486 287 13 13 452 5 478 9.36e-56 192
MS.gene048584.t1 MTR_6g038220 31.330 466 287 14 9 453 2 455 2.07e-55 191
MS.gene048584.t1 MTR_7g080935 31.799 478 275 16 14 461 7 463 3.51e-55 191
MS.gene048584.t1 MTR_6g014290 30.675 489 275 17 13 452 5 478 5.15e-55 191
MS.gene048584.t1 MTR_8g088560 31.545 466 275 15 18 454 10 460 1.47e-54 189
MS.gene048584.t1 MTR_8g083280 30.063 479 286 15 19 462 8 472 3.04e-54 188
MS.gene048584.t1 MTR_5g035580 30.901 466 275 16 18 456 13 458 4.94e-54 187
MS.gene048584.t1 MTR_6g038200 30.283 459 286 14 17 453 10 456 7.60e-54 187
MS.gene048584.t1 MTR_5g464760 29.668 482 283 16 16 452 10 480 9.53e-54 187
MS.gene048584.t1 MTR_6g038240 30.786 458 281 15 18 452 11 455 4.32e-53 185
MS.gene048584.t1 MTR_5g035560 30.886 463 275 16 18 454 11 454 1.97e-52 184
MS.gene048584.t1 MTR_7g080940 30.736 462 278 15 16 452 9 453 2.39e-51 180
MS.gene048584.t1 MTR_0036s0220 28.512 484 280 14 18 452 12 478 4.56e-51 180
MS.gene048584.t1 MTR_6g013960 27.869 488 292 13 13 452 5 480 8.43e-51 179
MS.gene048584.t1 MTR_6g014040 28.106 491 294 14 10 452 2 481 1.05e-50 179
MS.gene048584.t1 MTR_6g014250 27.721 487 292 13 13 452 5 478 1.32e-50 179
MS.gene048584.t1 MTR_6g013900 29.098 488 285 16 13 452 5 479 1.99e-50 178
MS.gene048584.t1 MTR_2g008210 26.477 491 291 14 13 452 6 477 2.03e-50 178
MS.gene048584.t1 MTR_3g084540 28.541 473 294 13 18 451 6 473 3.41e-50 178
MS.gene048584.t1 MTR_5g464810 28.512 484 282 15 17 452 11 478 1.16e-49 176
MS.gene048584.t1 MTR_5g064240 28.512 484 282 15 17 452 11 478 1.16e-49 176
MS.gene048584.t1 MTR_3g084520 28.692 474 293 14 18 452 6 473 1.32e-49 176
MS.gene048584.t1 MTR_6g013990 27.515 487 287 12 16 452 8 478 1.48e-49 176
MS.gene048584.t1 MTR_6g014187 26.598 485 296 12 16 452 8 480 2.11e-49 176
MS.gene048584.t1 MTR_6g014270 28.131 487 288 14 16 452 5 479 2.57e-49 176
MS.gene048584.t1 MTR_1g107380 28.571 476 292 13 18 456 13 477 7.16e-49 174
MS.gene048584.t1 MTR_6g013450 27.403 489 294 14 13 452 5 481 1.05e-48 174
MS.gene048584.t1 MTR_6g014310 27.629 485 293 15 15 452 8 481 1.43e-48 174
MS.gene048584.t1 MTR_3g479490 29.363 487 280 17 16 453 4 475 1.47e-48 173
MS.gene048584.t1 MTR_6g014200 27.010 485 294 12 16 452 5 477 2.25e-48 173
MS.gene048584.t1 MTR_4g095008 28.721 477 276 14 18 452 11 465 2.62e-48 174
MS.gene048584.t1 MTR_6g014020 27.198 489 294 14 13 452 5 480 2.94e-48 172
MS.gene048584.t1 MTR_3g084530 28.632 475 290 13 18 451 6 472 3.29e-48 172
MS.gene048584.t1 MTR_8g059425 26.749 486 298 14 13 452 5 478 2.43e-47 170
MS.gene048584.t1 MTR_1g107365 29.336 467 285 15 18 455 45 495 4.07e-47 170
MS.gene048584.t1 MTR_6g011340 27.016 496 286 13 13 452 5 480 4.83e-47 169
MS.gene048584.t1 MTR_5g016480 27.686 484 283 15 19 454 9 473 5.63e-47 169
MS.gene048584.t1 MTR_7g080900 30.022 463 290 16 13 453 7 457 5.94e-47 169
MS.gene048584.t1 MTR_7g011470 28.157 483 277 12 16 452 8 466 6.95e-47 169
MS.gene048584.t1 MTR_6g014050 27.216 485 295 12 15 452 8 481 7.55e-47 169
MS.gene048584.t1 MTR_3g479470 29.485 485 275 17 16 450 11 478 1.18e-46 168
MS.gene048584.t1 MTR_3g049970 28.659 492 270 17 18 455 9 473 1.71e-46 168
MS.gene048584.t1 MTR_6g013920 29.158 487 286 16 13 452 5 479 2.02e-46 167
MS.gene048584.t1 MTR_1g107350 28.571 483 282 15 18 455 8 472 2.33e-46 167
MS.gene048584.t1 MTR_4g024020 28.370 497 283 17 16 453 7 489 4.14e-46 167
MS.gene048584.t1 MTR_3g479520 27.879 495 295 17 7 452 2 483 6.34e-46 166
MS.gene048584.t1 MTR_8g064870 27.801 482 291 13 12 451 7 473 6.67e-46 166
MS.gene048584.t1 MTR_1g107360 28.452 478 281 17 18 455 9 465 7.61e-46 166
MS.gene048584.t1 MTR_7g011470 27.557 479 281 10 16 452 8 462 7.78e-46 166
MS.gene048584.t1 MTR_7g102490 28.880 509 277 17 6 453 4 488 8.00e-46 166
MS.gene048584.t1 MTR_6g014220 27.835 485 294 14 13 452 5 478 9.74e-46 166
MS.gene048584.t1 MTR_6g013440 25.926 486 298 16 16 452 9 481 2.43e-44 162
MS.gene048584.t1 MTR_1g107375 27.991 468 281 17 18 451 8 453 2.88e-44 161
MS.gene048584.t1 MTR_1g107285 29.046 482 266 18 19 451 9 463 3.79e-44 161
MS.gene048584.t1 MTR_0288s0020 25.667 487 285 14 13 452 5 461 6.82e-44 160
MS.gene048584.t1 MTR_4g094220 26.884 491 281 16 16 448 5 475 8.21e-44 160
MS.gene048584.t1 MTR_6g014300 26.819 481 284 17 16 452 10 466 1.23e-43 160
MS.gene048584.t1 MTR_5g087620 25.933 509 291 20 13 453 5 495 1.51e-43 160
MS.gene048584.t1 MTR_3g079480 28.099 484 288 18 16 452 19 489 1.84e-43 160
MS.gene048584.t1 MTR_4g094920 26.078 487 302 14 19 466 27 494 1.86e-43 160
MS.gene048584.t1 MTR_1g032490 29.412 476 291 14 12 451 4 470 3.18e-43 159
MS.gene048584.t1 MTR_6g014150 25.859 495 287 14 16 452 5 477 4.32e-43 159
MS.gene048584.t1 MTR_6g014170 27.216 485 281 15 13 452 5 462 8.15e-43 157
MS.gene048584.t1 MTR_1g107315 28.838 482 276 15 17 451 7 468 1.43e-42 157
MS.gene048584.t1 MTR_3g009510 26.854 499 279 18 16 454 3 475 1.73e-42 157
MS.gene048584.t1 MTR_7g102460 27.756 508 282 18 6 453 4 486 2.22e-42 157
MS.gene048584.t1 MTR_5g058320 27.235 481 283 16 16 452 8 465 5.01e-42 155
MS.gene048584.t1 MTR_0184s0040 28.000 475 264 16 18 440 21 469 2.70e-41 154
MS.gene048584.t1 MTR_0078s0190 28.000 475 264 16 18 440 21 469 2.70e-41 154
MS.gene048584.t1 MTR_7g102560 26.337 486 299 14 18 453 9 485 3.13e-41 154
MS.gene048584.t1 MTR_7g013200 27.549 461 275 14 18 448 5 436 2.01e-40 150
MS.gene048584.t1 MTR_7g117405 26.804 485 292 15 18 453 12 482 4.76e-40 150
MS.gene048584.t1 MTR_3g069710 27.178 482 292 18 12 462 5 458 2.43e-39 148
MS.gene048584.t1 MTR_8g009050 26.695 472 283 15 18 444 6 459 2.99e-39 148
MS.gene048584.t1 MTR_8g027885 25.826 484 300 13 1 444 1 465 5.28e-39 147
MS.gene048584.t1 MTR_0078s0060 27.021 470 275 14 18 440 6 454 6.98e-39 147
MS.gene048584.t1 MTR_7g013220 26.514 479 268 16 18 448 5 447 7.74e-39 146
MS.gene048584.t1 MTR_5g090660 24.950 497 293 13 16 455 3 476 9.44e-39 148
MS.gene048584.t1 MTR_7g117170 26.263 495 287 14 1 444 1 468 1.41e-38 146
MS.gene048584.t1 MTR_8g064880 28.638 426 255 13 18 401 9 427 1.59e-38 146
MS.gene048584.t1 MTR_7g013260 25.957 470 279 16 14 448 2 437 1.62e-38 145
MS.gene048584.t1 MTR_8g006730 26.652 469 283 15 16 440 4 455 2.67e-38 145
MS.gene048584.t1 MTR_5g031840 27.044 477 285 15 18 451 5 461 3.52e-38 145
MS.gene048584.t1 MTR_8g006710 26.566 463 290 14 16 440 4 454 3.63e-38 145
MS.gene048584.t1 MTR_3g069690 25.519 482 304 15 12 461 2 460 5.50e-38 144
MS.gene048584.t1 MTR_8g008990 25.996 477 282 14 18 444 6 461 7.84e-38 144
MS.gene048584.t1 MTR_8g027870 25.667 487 297 13 1 444 1 465 7.86e-38 144
MS.gene048584.t1 MTR_4g064987 26.226 469 286 16 15 452 5 444 9.75e-38 143
MS.gene048584.t1 MTR_7g013240 26.496 468 276 16 15 448 3 436 1.62e-37 142
MS.gene048584.t1 MTR_0078s0010 26.446 484 288 15 17 451 5 469 3.54e-37 142
MS.gene048584.t1 MTR_4g064987 26.160 474 286 17 15 452 5 450 6.56e-37 141
MS.gene048584.t1 MTR_8g009063 25.902 471 288 13 18 444 13 466 9.89e-37 141
MS.gene048584.t1 MTR_7g071040 25.918 490 295 17 9 444 8 483 1.48e-36 141
MS.gene048584.t1 MTR_7g070780 26.625 477 303 15 18 451 11 483 1.97e-36 140
MS.gene048584.t1 MTR_6g033675 25.053 471 304 11 15 447 1 460 3.35e-36 139
MS.gene048584.t1 MTR_7g070610 26.068 468 304 11 18 444 13 479 4.83e-36 139
MS.gene048584.t1 MTR_8g009055 25.847 472 287 14 18 444 6 459 5.68e-36 139
MS.gene048584.t1 MTR_7g047030 26.360 478 279 17 17 444 5 459 5.96e-36 139
MS.gene048584.t1 MTR_7g047270 26.360 478 279 17 17 444 5 459 5.96e-36 139
MS.gene048584.t1 MTR_8g074550 26.025 488 280 16 17 440 7 477 6.51e-36 139
MS.gene048584.t1 MTR_8g077590 27.178 482 261 17 17 441 8 456 6.62e-36 139
MS.gene048584.t1 MTR_7g070940 26.789 489 298 16 16 459 7 480 7.31e-36 139
MS.gene048584.t1 MTR_7g055710 27.010 485 295 19 9 444 2 476 1.13e-35 138
MS.gene048584.t1 MTR_7g070930 26.200 500 289 19 5 444 1 480 1.20e-35 138
MS.gene048584.t1 MTR_7g013180 28.228 457 269 17 18 440 5 436 1.28e-35 137
MS.gene048584.t1 MTR_7g070800 26.383 470 296 14 18 444 6 468 1.65e-35 138
MS.gene048584.t1 MTR_5g070090 26.749 486 277 17 17 454 10 464 2.06e-35 137
MS.gene048584.t1 MTR_8g009073 27.056 462 282 12 18 439 6 452 2.33e-35 137
MS.gene048584.t1 MTR_4g485640 27.948 458 282 12 28 449 219 664 2.35e-35 139
MS.gene048584.t1 MTR_6g023665 26.327 471 280 14 16 440 11 460 2.68e-35 137
MS.gene048584.t1 MTR_7g102550 25.615 488 302 14 14 449 5 483 2.97e-35 137
MS.gene048584.t1 MTR_7g070660 25.361 485 295 15 18 451 11 479 3.16e-35 137
MS.gene048584.t1 MTR_7g070910 25.562 489 298 17 9 444 2 477 3.73e-35 137
MS.gene048584.t1 MTR_5g045960 25.514 486 305 13 18 453 9 487 4.82e-35 136
MS.gene048584.t1 MTR_1g062380 24.152 501 304 15 18 458 16 500 6.51e-35 136
MS.gene048584.t1 MTR_8g466240 25.270 463 308 13 16 453 6 455 1.10e-34 135
MS.gene048584.t1 MTR_8g009067 25.367 477 289 13 18 448 6 461 1.70e-34 135
MS.gene048584.t1 MTR_7g102450 24.790 476 305 11 18 453 11 473 1.94e-34 135
MS.gene048584.t1 MTR_8g465670 27.158 475 276 19 16 440 5 459 2.39e-34 134
MS.gene048584.t1 MTR_5g031830 26.349 482 298 16 11 451 5 470 2.94e-34 134
MS.gene048584.t1 MTR_8g066610 26.025 488 288 18 18 451 9 477 3.75e-34 134
MS.gene048584.t1 MTR_4g031800 25.325 462 295 14 19 440 10 461 4.30e-34 134
MS.gene048584.t1 MTR_6g033725 23.382 479 295 11 15 445 1 455 7.28e-34 133
MS.gene048584.t1 MTR_5g090630 23.203 487 303 12 16 453 3 467 9.39e-34 132
MS.gene048584.t1 MTR_1g019510 25.319 470 289 13 18 444 6 456 9.80e-34 132
MS.gene048584.t1 MTR_7g070740 25.610 492 293 15 9 444 2 476 9.97e-34 133
MS.gene048584.t1 MTR_0184s0030 26.078 487 290 15 18 455 6 471 1.03e-33 132
MS.gene048584.t1 MTR_8g012650 28.084 381 218 12 109 451 109 471 1.21e-33 132
MS.gene048584.t1 MTR_4g118000 24.628 471 294 12 22 451 16 466 1.50e-33 132
MS.gene048584.t1 MTR_4g485630 25.261 479 299 14 18 451 9 473 1.58e-33 132
MS.gene048584.t1 MTR_5g090670 23.690 477 298 10 16 440 3 465 1.95e-33 132
MS.gene048584.t1 MTR_5g098930 25.255 491 288 17 16 452 3 468 2.48e-33 131
MS.gene048584.t1 MTR_7g070860 27.253 466 283 19 18 444 7 455 2.84e-33 131
MS.gene048584.t1 MTR_5g090620 24.138 493 299 14 16 452 3 476 3.67e-33 131
MS.gene048584.t1 MTR_8g008970 25.793 473 284 15 18 444 6 457 5.19e-33 133
MS.gene048584.t1 MTR_8g008970 29.464 224 134 7 230 444 573 781 1.32e-20 95.5
MS.gene048584.t1 MTR_5g045970 25.462 487 302 16 18 452 16 493 5.53e-33 131
MS.gene048584.t1 MTR_6g014240 25.417 480 276 17 16 451 5 446 6.76e-33 130
MS.gene048584.t1 MTR_6g033625 26.667 480 271 15 15 440 1 453 7.57e-33 130
MS.gene048584.t1 MTR_4g117960 25.572 481 292 15 22 451 15 480 1.01e-32 130
MS.gene048584.t1 MTR_2g040530 25.000 480 302 17 16 453 3 466 1.02e-32 129
MS.gene048584.t1 MTR_3g479610 27.864 323 199 11 152 452 3 313 1.22e-32 126
MS.gene048584.t1 MTR_5g090700 23.188 483 293 15 16 440 3 465 1.43e-32 129
MS.gene048584.t1 MTR_5g090600 24.153 472 303 13 16 452 3 454 1.53e-32 129
MS.gene048584.t1 MTR_6g014190 27.397 292 189 6 175 452 5 287 1.62e-32 125
MS.gene048584.t1 MTR_8g006270 29.805 359 206 12 113 440 109 452 1.70e-32 129
MS.gene048584.t1 MTR_8g043470 24.031 387 228 9 90 452 34 378 3.35e-32 127
MS.gene048584.t1 MTR_6g488280 24.841 471 287 14 16 440 4 453 4.06e-32 128
MS.gene048584.t1 MTR_0428s0010 24.841 471 287 14 16 440 4 453 4.06e-32 128
MS.gene048584.t1 MTR_6g033660 27.654 358 216 9 113 445 118 457 4.72e-32 128
MS.gene048584.t1 MTR_5g031860 27.801 482 290 18 11 451 5 469 8.62e-32 127
MS.gene048584.t1 MTR_6g005600 26.059 472 285 14 16 441 4 457 1.02e-31 127
MS.gene048584.t1 MTR_2g098430 22.938 497 313 14 16 457 4 485 1.11e-31 127
MS.gene048584.t1 MTR_5g019580 24.547 497 289 14 16 450 5 477 2.10e-31 126
MS.gene048584.t1 MTR_4g108250 25.577 477 298 17 18 444 11 480 2.77e-31 126
MS.gene048584.t1 MTR_8g012635 26.598 485 280 17 17 447 5 467 3.34e-31 125
MS.gene048584.t1 MTR_0891s0010 27.119 295 186 8 172 452 11 290 4.44e-31 121
MS.gene048584.t1 MTR_5g016660 25.889 506 293 16 5 451 1 483 5.63e-31 125
MS.gene048584.t1 MTR_4g485620 27.056 377 250 9 94 451 84 454 7.96e-31 124
MS.gene048584.t1 MTR_8g007585 33.000 200 117 3 262 452 201 392 1.03e-30 123
MS.gene048584.t1 MTR_8g006260 30.592 304 163 10 168 440 172 458 1.34e-30 124
MS.gene048584.t1 MTR_2g046750 24.017 483 304 17 16 453 3 467 2.39e-30 123
MS.gene048584.t1 MTR_4g117980 34.091 220 120 5 256 451 263 481 3.20e-30 123
MS.gene048584.t1 MTR_6g033615 25.161 465 283 13 15 440 1 439 4.43e-30 122
MS.gene048584.t1 MTR_2g046820 23.044 473 318 12 16 453 3 464 5.74e-30 122
MS.gene048584.t1 MTR_0009s0240 24.048 499 289 19 16 460 5 467 6.66e-30 122
MS.gene048584.t1 MTR_1g029540 31.797 217 129 4 253 452 246 460 7.28e-30 121
MS.gene048584.t1 MTR_8g006220 26.860 484 275 18 16 440 4 467 8.62e-30 121
MS.gene048584.t1 MTR_6g014160 26.437 348 203 9 58 378 45 366 8.90e-30 120
MS.gene048584.t1 MTR_7g070810 23.918 485 308 15 14 451 5 475 1.05e-29 121
MS.gene048584.t1 MTR_4g082820 27.673 477 278 19 18 449 7 461 1.10e-29 121
MS.gene048584.t1 MTR_6g035265 24.059 478 298 16 22 452 15 474 1.15e-29 121
MS.gene048584.t1 MTR_8g009067 27.731 357 212 10 122 448 3 343 1.47e-29 119
MS.gene048584.t1 MTR_5g070040 25.466 483 294 16 16 454 9 469 1.81e-29 120
MS.gene048584.t1 MTR_2g059240 24.025 487 306 17 9 452 4 469 1.99e-29 120
MS.gene048584.t1 MTR_4g008630 32.692 208 121 4 262 452 258 463 2.88e-29 120
MS.gene048584.t1 MTR_5g090610 23.769 467 294 13 16 440 3 449 3.34e-29 119
MS.gene048584.t1 MTR_0477s0010 31.500 200 120 3 262 452 126 317 8.62e-29 115
MS.gene048584.t1 MTR_5g090580 23.361 488 286 14 16 441 3 464 9.50e-29 118
MS.gene048584.t1 MTR_5g019580 24.694 490 269 15 16 450 57 501 1.83e-28 118
MS.gene048584.t1 MTR_4g117950 28.205 273 173 5 201 451 191 462 2.12e-28 117
MS.gene048584.t1 MTR_6g035185 22.059 476 317 11 22 451 15 482 2.66e-28 117
MS.gene048584.t1 MTR_8g071070 23.732 493 300 14 16 456 5 473 3.60e-28 117
MS.gene048584.t1 MTR_5g027210 24.130 460 270 15 15 409 1 446 4.18e-28 117
MS.gene048584.t1 MTR_5g067170 23.840 474 308 12 22 451 15 479 4.29e-28 117
MS.gene048584.t1 MTR_8g012730 33.182 220 112 6 248 439 84 296 4.55e-28 114
MS.gene048584.t1 MTR_8g009073 28.701 331 196 8 136 439 6 323 6.53e-28 114
MS.gene048584.t1 MTR_8g012745 25.050 499 278 20 17 451 5 471 1.03e-27 115
MS.gene048584.t1 MTR_4g082810 27.384 409 240 18 18 382 7 402 1.18e-27 114
MS.gene048584.t1 MTR_7g012120 32.895 228 126 5 250 451 257 483 1.30e-27 115
MS.gene048584.t1 MTR_4g117890 23.567 471 306 12 19 448 14 471 1.80e-27 115
MS.gene048584.t1 MTR_5g029800 30.667 225 129 5 253 451 254 477 1.99e-27 115
MS.gene048584.t1 MTR_7g046490 30.859 256 139 7 210 441 212 453 2.01e-27 114
MS.gene048584.t1 MTR_0536s0010 23.011 465 310 10 22 451 25 476 2.43e-27 114
MS.gene048584.t1 MTR_2g035040 33.333 213 117 4 263 451 175 386 2.50e-27 113
MS.gene048584.t1 MTR_8g032950 30.804 224 129 4 256 454 261 483 2.76e-27 114
MS.gene048584.t1 MTR_7g071050 25.000 472 261 17 7 435 2 423 3.07e-27 113
MS.gene048584.t1 MTR_8g044140 27.056 377 224 13 112 451 86 448 9.06e-27 112
MS.gene048584.t1 MTR_2g035020 28.521 284 173 7 198 454 204 484 1.22e-26 112
MS.gene048584.t1 MTR_0536s0020 23.207 474 310 16 19 451 19 479 3.46e-26 111
MS.gene048584.t1 MTR_7g102520 22.736 497 323 13 10 454 4 491 1.10e-25 110
MS.gene048584.t1 MTR_8g090095 29.864 221 133 4 253 453 263 481 1.34e-25 109
MS.gene048584.t1 MTR_4g128720 22.414 464 307 13 16 449 13 453 1.43e-25 109
MS.gene048584.t1 MTR_7g470610 32.338 201 117 5 200 383 68 266 1.74e-25 106
MS.gene048584.t1 MTR_7g070583 32.338 201 117 5 200 383 68 266 1.74e-25 106
MS.gene048584.t1 MTR_6g078320 27.208 283 169 7 180 439 199 467 1.83e-25 109
MS.gene048584.t1 MTR_6g035295 26.166 386 241 11 110 463 121 494 2.12e-25 108
MS.gene048584.t1 MTR_5g098960 23.767 446 266 16 16 419 5 418 2.64e-25 108
MS.gene048584.t1 MTR_1g040310 25.781 384 245 11 112 465 124 497 3.05e-25 108
MS.gene048584.t1 MTR_8g012630 31.455 213 111 6 263 447 206 411 3.75e-25 107
MS.gene048584.t1 MTR_7g067330 25.381 394 248 14 16 390 7 373 5.87e-25 107
MS.gene048584.t1 MTR_7g067120 23.485 396 255 12 16 391 7 374 6.64e-25 107
MS.gene048584.t1 MTR_1g019520 30.263 228 118 6 263 465 6 217 1.04e-24 102
MS.gene048584.t1 MTR_7g070870 25.000 404 237 13 18 377 19 400 1.16e-24 106
MS.gene048584.t1 MTR_2g034990 22.899 476 312 13 22 451 15 481 2.04e-24 106
MS.gene048584.t1 MTR_7g080960 30.736 231 109 5 232 458 294 477 2.62e-24 105
MS.gene048584.t1 MTR_6g013680 24.760 416 229 15 69 452 12 375 3.22e-24 104
MS.gene048584.t1 MTR_4g485590 35.238 210 114 6 188 383 177 378 3.53e-24 104
MS.gene048584.t1 MTR_3g009490 32.124 193 100 6 286 454 2 187 8.43e-24 98.6
MS.gene048584.t1 MTR_5g004940 30.882 204 103 5 262 451 198 377 2.33e-23 102
MS.gene048584.t1 MTR_4g128690 22.414 464 300 14 18 449 15 450 4.04e-23 102
MS.gene048584.t1 MTR_5g040030 25.000 392 241 11 110 464 123 498 4.26e-23 102
MS.gene048584.t1 MTR_5g066410 24.138 435 280 14 21 425 1 415 6.35e-23 101
MS.gene048584.t1 MTR_8g068340 23.765 425 248 15 18 391 12 411 1.02e-22 100
MS.gene048584.t1 MTR_2086s0010 30.114 176 105 4 287 452 5 172 1.96e-22 94.4
MS.gene048584.t1 MTR_1996s0010 30.114 176 105 4 287 452 5 172 1.96e-22 94.4
MS.gene048584.t1 MTR_4g123553 22.936 436 295 14 18 426 15 436 3.57e-22 99.4
MS.gene048584.t1 MTR_5g072825 44.330 97 44 3 9 99 2 94 3.91e-22 90.9
MS.gene048584.t1 MTR_8g007565 23.974 463 267 17 18 425 7 439 5.25e-22 99.0
MS.gene048584.t1 MTR_8g007650 24.190 463 266 17 18 425 7 439 5.87e-22 98.6
MS.gene048584.t1 MTR_5g066390 31.250 160 93 3 302 452 64 215 6.29e-22 94.4
MS.gene048584.t1 MTR_5g039900 23.251 486 290 14 19 444 14 476 8.63e-22 98.2
MS.gene048584.t1 MTR_7g039550 28.516 256 159 6 210 444 2 254 1.21e-21 94.7
MS.gene048584.t1 MTR_7g070760 31.795 195 114 4 202 392 29 208 4.68e-21 91.7
MS.gene048584.t1 MTR_8g068360 24.353 464 263 22 18 417 12 451 5.28e-21 95.9
MS.gene048584.t1 MTR_6g014185 25.131 382 207 13 81 453 35 346 7.15e-21 94.4
MS.gene048584.t1 MTR_8g068330 24.283 453 284 17 18 429 8 442 1.15e-20 94.7
MS.gene048584.t1 MTR_6g042310 22.414 406 265 10 18 390 18 406 2.00e-20 94.0
MS.gene048584.t1 MTR_1g107325 24.444 450 229 13 18 456 8 357 3.26e-20 92.4
MS.gene048584.t1 MTR_2g008225 32.044 181 112 3 206 378 220 397 1.07e-19 92.0
MS.gene048584.t1 MTR_2g008226 29.808 208 126 7 261 460 276 471 1.81e-19 91.3
MS.gene048584.t1 MTR_2g008220 31.492 181 113 3 206 378 219 396 2.03e-19 90.9
MS.gene048584.t1 MTR_6g014186 21.792 491 274 17 16 452 5 439 3.70e-19 90.1
MS.gene048584.t1 MTR_8g009840 31.606 193 99 7 278 444 333 518 4.90e-19 90.1
MS.gene048584.t1 MTR_2g046620 27.511 229 151 6 206 426 216 437 6.86e-18 86.3
MS.gene048584.t1 MTR_4g077960 23.810 399 250 12 28 391 2 381 2.47e-17 84.3
MS.gene048584.t1 MTR_6g036650 23.851 457 272 19 18 426 18 446 4.74e-17 84.0
MS.gene048584.t1 MTR_0536s0030 29.487 156 99 4 304 451 199 351 5.54e-17 82.8
MS.gene048584.t1 MTR_7g070995 34.848 132 77 4 321 444 7 137 7.07e-17 78.2
MS.gene048584.t1 MTR_6g014000 31.008 129 81 2 321 449 33 153 1.11e-16 82.8
MS.gene048584.t1 MTR_3g435310 32.653 147 90 3 253 391 218 363 1.82e-15 78.6
MS.gene048584.t1 MTR_4g059370 27.160 243 148 6 195 421 133 362 3.03e-15 77.8
MS.gene048584.t1 MTR_2g014900 22.323 439 285 14 18 420 7 425 1.09e-14 76.3
MS.gene048584.t1 MTR_2g083480 26.009 223 135 5 213 420 220 427 2.94e-14 75.1
MS.gene048584.t1 MTR_8g056740 29.508 183 117 4 263 433 170 352 1.01e-13 73.2
MS.gene048584.t1 MTR_2g083430 23.851 457 281 16 18 431 8 440 1.44e-13 72.8
MS.gene048584.t1 MTR_1g090270 24.691 243 148 6 198 421 209 435 1.45e-13 72.8
MS.gene048584.t1 MTR_0199s0010 26.033 242 145 9 13 222 5 244 3.17e-13 70.5
MS.gene048584.t1 MTR_2g083380 27.354 223 138 6 210 420 234 444 2.26e-12 69.3
MS.gene048584.t1 MTR_4g079250 24.775 222 139 5 213 420 220 427 2.67e-12 68.9
MS.gene048584.t1 MTR_4g079270 24.138 232 154 5 200 420 207 427 4.63e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene048584.t1 AT2G30150 44.589 462 232 7 7 453 2 454 7.57e-139 407
MS.gene048584.t1 AT2G30140 44.348 460 236 6 7 454 2 453 3.36e-136 400
MS.gene048584.t1 AT2G30150 45.190 447 221 7 22 453 1 438 7.24e-136 399
MS.gene048584.t1 AT2G30140 43.319 464 236 6 7 454 2 454 8.38e-135 396
MS.gene048584.t1 AT1G22360 28.747 487 281 14 16 452 8 478 2.23e-59 202
MS.gene048584.t1 AT2G36970 28.221 489 285 13 16 456 8 478 1.77e-57 197
MS.gene048584.t1 AT1G22400 29.448 489 276 16 16 452 11 482 2.49e-57 197
MS.gene048584.t1 AT1G22360 27.926 487 273 13 16 452 8 466 4.22e-55 191
MS.gene048584.t1 AT1G05675 29.718 461 279 12 17 448 5 449 1.75e-54 189
MS.gene048584.t1 AT2G28080 30.998 471 265 16 22 452 22 472 3.96e-54 188
MS.gene048584.t1 AT1G05680 29.348 460 282 12 17 448 5 449 1.12e-53 186
MS.gene048584.t1 AT1G22340 28.834 489 282 15 16 451 11 486 1.84e-53 187
MS.gene048584.t1 AT2G31750 30.670 463 286 14 16 454 6 457 3.83e-53 186
MS.gene048584.t1 AT2G31750 30.586 461 285 14 16 452 6 455 5.44e-53 185
MS.gene048584.t1 AT1G22380 28.306 484 287 16 16 452 11 481 2.25e-52 184
MS.gene048584.t1 AT1G05560 26.625 477 287 13 18 456 5 456 2.54e-52 183
MS.gene048584.t1 AT1G05560 26.598 485 293 13 10 456 47 506 5.12e-52 184
MS.gene048584.t1 AT1G05530 27.021 470 287 12 18 451 5 454 5.56e-51 179
MS.gene048584.t1 AT1G78270 28.631 482 288 14 16 452 11 481 1.30e-49 176
MS.gene048584.t1 AT4G15550 28.778 483 267 14 18 448 13 470 2.47e-49 175
MS.gene048584.t1 AT2G23260 27.922 462 291 15 16 451 8 453 1.09e-48 173
MS.gene048584.t1 AT4G15480 29.675 492 279 19 18 463 19 489 2.78e-48 173
MS.gene048584.t1 AT2G43840 28.390 472 274 14 15 451 4 446 2.80e-48 172
MS.gene048584.t1 AT2G43840 28.602 472 273 15 15 451 4 446 1.50e-47 170
MS.gene048584.t1 AT3G21560 27.419 496 291 15 1 451 1 472 1.53e-47 171
MS.gene048584.t1 AT1G10400 26.819 481 292 18 16 455 5 466 4.71e-47 169
MS.gene048584.t1 AT2G43820 28.448 464 282 15 16 451 5 446 4.96e-47 169
MS.gene048584.t1 AT4G15490 27.950 483 304 14 17 465 7 479 3.43e-46 167
MS.gene048584.t1 AT2G23250 29.571 443 280 17 27 451 7 435 8.27e-46 165
MS.gene048584.t1 AT1G24100 26.737 475 294 13 10 451 5 458 1.05e-45 165
MS.gene048584.t1 AT2G31790 28.452 478 267 17 16 448 6 453 2.50e-45 164
MS.gene048584.t1 AT1G22370 27.349 479 293 16 16 452 11 476 2.27e-44 162
MS.gene048584.t1 AT4G01070 27.907 473 267 17 18 440 8 456 2.07e-43 159
MS.gene048584.t1 AT2G16890 26.667 495 298 20 13 462 4 478 2.77e-43 159
MS.gene048584.t1 AT5G59590 25.902 471 293 10 12 451 4 449 1.38e-42 157
MS.gene048584.t1 AT5G14860 26.572 493 284 20 18 454 8 478 2.99e-42 156
MS.gene048584.t1 AT5G59580 26.695 472 281 13 15 451 6 447 1.34e-41 154
MS.gene048584.t1 AT3G46700 27.312 465 290 13 12 451 3 444 8.55e-41 152
MS.gene048584.t1 AT3G21800 26.113 494 290 16 16 453 3 477 1.42e-40 152
MS.gene048584.t1 AT4G15500 26.496 468 300 14 18 453 9 464 3.53e-40 150
MS.gene048584.t1 AT3G46660 27.872 470 279 16 16 451 12 455 1.04e-39 149
MS.gene048584.t1 AT3G21790 26.305 498 292 16 15 454 1 481 4.94e-39 148
MS.gene048584.t1 AT3G46670 26.552 467 277 14 18 448 9 445 1.83e-38 145
MS.gene048584.t1 AT2G36750 26.025 488 297 15 18 453 10 485 2.45e-38 145
MS.gene048584.t1 AT2G36780 26.337 505 275 20 18 453 14 490 4.41e-38 145
MS.gene048584.t1 AT3G11340 25.486 463 295 15 16 452 7 445 1.59e-37 142
MS.gene048584.t1 AT3G53160 23.810 483 315 11 18 453 8 484 1.93e-37 143
MS.gene048584.t1 AT3G53150 26.628 522 303 17 1 453 1 511 4.25e-37 142
MS.gene048584.t1 AT5G03490 26.824 466 283 15 18 449 19 460 4.83e-37 142
MS.gene048584.t1 AT3G21760 24.950 505 292 17 15 454 1 483 6.51e-37 142
MS.gene048584.t1 AT5G38040 26.770 452 285 14 26 451 18 449 6.62e-37 141
MS.gene048584.t1 AT2G36770 25.657 495 291 18 18 453 14 490 6.64e-37 142
MS.gene048584.t1 AT3G46680 26.269 453 285 14 16 440 7 438 8.09e-37 140
MS.gene048584.t1 AT3G02100 26.501 483 286 15 7 448 2 456 9.86e-37 141
MS.gene048584.t1 AT3G46650 27.015 459 278 14 12 447 4 428 1.08e-36 140
MS.gene048584.t1 AT2G36800 25.000 500 289 15 18 453 12 489 1.13e-36 141
MS.gene048584.t1 AT3G46690 26.464 461 281 13 12 432 3 445 1.51e-36 140
MS.gene048584.t1 AT3G21780 24.587 484 308 13 15 454 1 471 2.96e-36 140
MS.gene048584.t1 AT3G21750 25.000 496 291 16 15 454 1 471 3.10e-36 139
MS.gene048584.t1 AT4G14090 24.573 468 292 15 16 448 11 452 6.68e-36 138
MS.gene048584.t1 AT4G15280 24.008 504 313 17 4 454 22 508 2.04e-35 138
MS.gene048584.t1 AT2G16890 25.968 439 263 18 13 407 4 424 3.18e-35 136
MS.gene048584.t1 AT4G15280 24.138 493 304 17 15 454 1 476 1.23e-34 135
MS.gene048584.t1 AT2G29740 24.847 491 292 14 16 451 6 474 1.52e-34 135
MS.gene048584.t1 AT5G17050 24.375 480 308 14 5 452 1 457 2.47e-34 134
MS.gene048584.t1 AT2G29730 24.268 478 300 17 18 452 5 463 2.69e-34 134
MS.gene048584.t1 AT5G38010 24.893 466 308 9 12 451 4 453 4.94e-34 133
MS.gene048584.t1 AT5G26310 23.849 478 286 12 16 441 5 456 1.51e-33 132
MS.gene048584.t1 AT3G46720 26.667 450 278 12 16 440 7 429 2.69e-33 131
MS.gene048584.t1 AT3G50740 26.141 482 276 19 16 441 5 462 5.90e-33 130
MS.gene048584.t1 AT2G29710 23.319 476 309 16 17 452 4 463 6.98e-33 130
MS.gene048584.t1 AT1G73880 25.259 483 296 17 16 456 12 471 7.60e-33 130
MS.gene048584.t1 AT1G51210 25.508 443 286 17 8 426 10 432 8.43e-33 129
MS.gene048584.t1 AT2G36790 25.813 492 294 18 18 453 13 489 1.12e-32 130
MS.gene048584.t1 AT2G36760 24.385 488 306 17 18 453 14 490 1.97e-32 129
MS.gene048584.t1 AT5G17040 24.138 464 299 14 17 453 4 441 2.23e-32 128
MS.gene048584.t1 AT1G01420 25.941 478 277 19 18 444 8 459 3.99e-32 128
MS.gene048584.t1 AT4G36770 24.681 470 274 15 18 434 4 446 4.82e-32 127
MS.gene048584.t1 AT1G01420 25.941 478 277 19 18 444 11 462 5.02e-32 128
MS.gene048584.t1 AT1G07250 25.657 495 291 17 16 455 4 476 8.59e-32 127
MS.gene048584.t1 AT2G15480 23.409 487 314 15 18 451 10 490 1.18e-31 127
MS.gene048584.t1 AT4G34131 26.075 372 248 11 99 452 118 480 1.22e-31 127
MS.gene048584.t1 AT3G55700 27.835 291 182 5 174 452 177 451 1.65e-31 126
MS.gene048584.t1 AT1G07260 26.016 492 286 20 16 452 4 472 4.25e-31 125
MS.gene048584.t1 AT1G30530 25.482 467 293 15 17 453 11 452 5.49e-31 124
MS.gene048584.t1 AT5G05900 25.602 457 277 16 18 432 8 443 9.22e-31 124
MS.gene048584.t1 AT4G34138 23.810 504 310 17 10 459 3 486 1.18e-30 124
MS.gene048584.t1 AT2G15480 23.382 479 314 15 18 451 10 480 2.43e-30 123
MS.gene048584.t1 AT4G15260 26.486 370 225 10 118 454 2 357 2.75e-30 121
MS.gene048584.t1 AT5G66690 26.724 464 285 16 16 438 5 454 7.14e-30 122
MS.gene048584.t1 AT3G22250 27.015 459 261 16 12 421 2 435 1.42e-29 120
MS.gene048584.t1 AT2G29750 25.101 494 290 19 17 454 7 476 2.25e-29 120
MS.gene048584.t1 AT5G05880 24.729 461 277 14 18 432 8 444 2.99e-29 119
MS.gene048584.t1 AT1G07240 27.200 375 222 13 110 452 121 476 4.12e-29 119
MS.gene048584.t1 AT2G18570 24.895 474 286 15 16 440 3 455 5.41e-29 119
MS.gene048584.t1 AT3G55710 28.346 254 155 5 213 452 215 455 1.40e-28 118
MS.gene048584.t1 AT5G05870 23.441 465 311 10 16 451 6 454 1.64e-28 117
MS.gene048584.t1 AT2G15490 28.077 260 170 5 206 451 221 477 2.18e-28 117
MS.gene048584.t1 AT2G15490 27.757 263 170 5 206 451 221 480 2.57e-28 117
MS.gene048584.t1 AT1G01390 26.442 416 242 14 18 386 25 423 5.55e-28 116
MS.gene048584.t1 AT3G16520 26.923 364 225 12 110 450 113 458 5.89e-28 116
MS.gene048584.t1 AT1G01390 26.258 457 269 16 18 427 8 443 6.94e-28 116
MS.gene048584.t1 AT4G34135 25.355 422 268 16 16 396 9 424 1.01e-27 115
MS.gene048584.t1 AT1G22370 28.013 307 191 10 165 452 11 306 1.41e-27 112
MS.gene048584.t1 AT5G05890 24.893 466 274 15 18 432 8 448 1.65e-27 114
MS.gene048584.t1 AT5G05860 24.464 466 295 12 18 452 9 448 1.99e-27 114
MS.gene048584.t1 AT2G26480 23.890 473 292 12 16 452 6 446 4.95e-27 113
MS.gene048584.t1 AT3G16520 28.383 303 185 9 110 390 113 405 1.58e-26 112
MS.gene048584.t1 AT3G16520 28.383 303 185 9 110 390 113 405 1.66e-26 112
MS.gene048584.t1 AT2G18560 26.515 396 234 13 91 450 1 375 4.68e-26 109
MS.gene048584.t1 AT5G17030 23.014 491 306 14 5 455 1 459 5.26e-26 110
MS.gene048584.t1 AT5G37950 27.562 283 183 6 93 361 63 337 4.42e-25 106
MS.gene048584.t1 AT5G37950 26.829 287 186 5 93 361 63 343 7.29e-24 102
MS.gene048584.t1 AT5G65550 23.373 415 263 14 16 391 7 405 2.00e-23 103
MS.gene048584.t1 AT1G06000 24.899 494 249 19 14 451 6 433 5.33e-23 101
MS.gene048584.t1 AT5G12890 28.137 263 159 8 206 448 226 478 6.72e-23 101
MS.gene048584.t1 AT5G49690 25.740 439 274 17 18 424 10 428 4.57e-22 99.0
MS.gene048584.t1 AT5G17040 24.919 309 193 8 162 453 53 339 2.26e-21 95.5
MS.gene048584.t1 AT4G01070 26.087 322 190 12 18 311 8 309 5.39e-18 85.5
MS.gene048584.t1 AT2G22590 33.333 144 83 3 259 390 270 412 1.61e-16 82.0
MS.gene048584.t1 AT1G64910 21.311 427 292 11 18 421 6 411 1.65e-15 79.0
MS.gene048584.t1 AT1G50580 23.144 229 155 4 210 427 200 418 2.42e-14 75.5
MS.gene048584.t1 AT5G53990 23.333 240 155 6 193 421 190 411 1.22e-13 73.2
MS.gene048584.t1 AT3G29630 20.767 443 294 14 16 427 4 420 3.09e-13 72.0
MS.gene048584.t1 AT3G29630 25.698 179 121 3 260 427 217 394 4.17e-13 71.2
MS.gene048584.t1 AT2G22930 22.222 261 174 5 171 420 168 410 2.79e-12 68.9
MS.gene048584.t1 AT4G34135 25.309 324 204 14 16 307 9 326 4.97e-12 67.4
MS.gene048584.t1 AT5G54010 19.731 446 286 14 16 421 4 417 6.34e-12 67.8
MS.gene048584.t1 AT1G64920 21.941 237 158 6 200 421 191 415 2.50e-11 65.9
MS.gene048584.t1 AT4G09500 22.656 256 169 5 176 420 173 410 3.90e-11 65.5

Find 99 sgRNAs with CRISPR-Local

Find 241 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTGCGATTGTTTCCTCTTT+TGG 0.175518 3.3:+53459188 MS.gene048584:CDS
TTTGGACCAATTGTGTAAAT+TGG 0.200554 3.3:-53462166 None:intergenic
GAAACATATGTGTGGGAAAA+TGG 0.209304 3.3:+53462420 MS.gene048584:CDS
ATCCTTCTATAGGTGGTTAT+TGG 0.229141 3.3:+53462485 MS.gene048584:CDS
ATTGTTGAAGATTGGAAAAT+TGG 0.237800 3.3:+53462607 MS.gene048584:CDS
GCTTGCGTTGTAGGAAAATA+TGG 0.263003 3.3:-53459294 None:intergenic
GATAAAGAAATTCATGGATT+TGG 0.273240 3.3:+53462693 MS.gene048584:CDS
AACATACCTTACTTTAATCT+TGG 0.291719 3.3:+53462187 MS.gene048584:CDS
TCTCTAAATGCTACTAATAA+TGG 0.298126 3.3:+53462223 MS.gene048584:CDS
TACCTAAATGCTTGCGTTGT+AGG 0.301252 3.3:-53459303 None:intergenic
TTTATTGATAAAGAAATTCA+TGG 0.318239 3.3:+53462687 MS.gene048584:CDS
ATATTCCGGTGGCTGCGTTC+TGG 0.321377 3.3:+53459236 MS.gene048584:CDS
GTAAGATTATTGTTGAAGAT+TGG 0.329370 3.3:+53462599 MS.gene048584:CDS
ATTATATTCCATCAAATTCC+TGG 0.329643 3.3:+53461978 MS.gene048584:CDS
TTCCTACAACGCAAGCATTT+AGG 0.330420 3.3:+53459301 MS.gene048584:CDS
AATTGGGTGGAGAGTGAAAA+AGG 0.345078 3.3:+53462624 MS.gene048584:CDS
TAACCAATCTTTGTAACTTT+GGG 0.345448 3.3:-53462251 None:intergenic
TTAACCAATCTTTGTAACTT+TGG 0.352674 3.3:-53462252 None:intergenic
TGGCTCTTGATAGTCGCTTT+TGG 0.358932 3.3:-53458878 None:intergenic
ATGTACAAAACAGAATCTTT+AGG 0.358971 3.3:-53462283 None:intergenic
ACAATTCCAATTTACACAAT+TGG 0.367981 3.3:+53462160 MS.gene048584:CDS
ACAAAGGTGACAAGGATGTT+AGG 0.371807 3.3:-53458980 None:intergenic
TTTAACATTTCCTCTTGCTA+TGG 0.379731 3.3:+53462561 MS.gene048584:CDS
GAGCCCATTGCAAAATTTGT+TGG 0.389261 3.3:-53462039 None:intergenic
AGATTAAAGTAAGGTATGTT+TGG 0.391403 3.3:-53462184 None:intergenic
CTGCCCAAAGTTACAAAGAT+TGG 0.396042 3.3:+53462248 MS.gene048584:CDS
AAACATATGTGTGGGAAAAT+GGG 0.397297 3.3:+53462421 MS.gene048584:CDS
TAGAGACAAGTGACTTGCTT+AGG 0.431016 3.3:-53458952 None:intergenic
GAATCCATCCCTAACGTTGT+TGG 0.440660 3.3:+53459064 MS.gene048584:CDS
AACTTGTCACCAACAACGTT+AGG 0.445829 3.3:-53459073 None:intergenic
GGGCAGTTCATGTTGGAAAC+CGG 0.448557 3.3:+53459209 MS.gene048584:CDS
TTGTTGAAGATTGGAAAATT+GGG 0.451022 3.3:+53462608 MS.gene048584:CDS
ATTCATTTGCGTTCTTGAAA+CGG 0.451138 3.3:-53462326 None:intergenic
GGTTAATCGATCAGCTTGTT+CGG 0.460745 3.3:+53459146 MS.gene048584:CDS
TGGAAACCGGAGGAATATTC+CGG 0.460893 3.3:+53459222 MS.gene048584:CDS
CAAAGGTGACAAGGATGTTA+GGG 0.461834 3.3:-53458979 None:intergenic
AACGTCAACGTCGGAGTTGT+GGG 0.466254 3.3:+53459261 MS.gene048584:CDS
GTCCAATAACCACCTATAGA+AGG 0.466360 3.3:-53462487 None:intergenic
GTGTGGGAAAATGGGGTTTG+TGG 0.466437 3.3:+53462429 MS.gene048584:CDS
CAACGTCAACGTCGGAGTTG+TGG 0.472165 3.3:+53459260 MS.gene048584:CDS
TGAAGGTGTTATGACTGAAA+TGG 0.475242 3.3:+53459108 MS.gene048584:CDS
ACAATAATCTTACTAATCAA+TGG 0.475557 3.3:-53462589 None:intergenic
TGACTTGCTTAGGTTCATCA+TGG 0.476422 3.3:-53458942 None:intergenic
GTATTGTCACATCCTTCTAT+AGG 0.480794 3.3:+53462475 MS.gene048584:CDS
TTGACACATGAAGCATCAAA+TGG 0.490021 3.3:+53462847 MS.gene048584:CDS
GGATGATAAGTTAGACACTT+TGG 0.490333 3.3:+53462645 MS.gene048584:CDS
CCTTTGTTGTCACACAAGAA+TGG 0.490852 3.3:+53458996 MS.gene048584:CDS
AGACGAACCCAGGAATTTGA+TGG 0.492144 3.3:-53461986 None:intergenic
CAACATGAACTGCCCAAAAG+AGG 0.493880 3.3:-53459201 None:intergenic
GGTTGGAATTCTGTTATTGA+AGG 0.500422 3.3:+53462517 MS.gene048584:CDS
GATGTGACAATACCCTCAAT+TGG 0.509026 3.3:-53462465 None:intergenic
TTATATTCCATCAAATTCCT+GGG 0.510705 3.3:+53461979 MS.gene048584:CDS
GACTTGCTTAGGTTCATCAT+GGG 0.512171 3.3:-53458941 None:intergenic
AAATGGGGTTTGTGGTGACA+TGG 0.513482 3.3:+53462437 MS.gene048584:CDS
ATGTGTCCACGTGATGGGTA+TGG 0.521026 3.3:-53458914 None:intergenic
AGACACTTTGGTGATAAAAG+AGG 0.521298 3.3:+53462657 MS.gene048584:CDS
CAGCCACCGGAATATTCCTC+CGG 0.528894 3.3:-53459228 None:intergenic
ACTTGTCACCAACAACGTTA+GGG 0.530251 3.3:-53459072 None:intergenic
GCATCTGCATTGCACGATAG+TGG 0.531451 3.3:+53462355 MS.gene048584:CDS
ACAAAACAGAATCTTTAGGT+TGG 0.533239 3.3:-53462279 None:intergenic
TAGTGGTGTTCGATTCTTGT+GGG 0.539153 3.3:+53462372 MS.gene048584:CDS
AAGTTTATAGATGTTGTTGA+AGG 0.542873 3.3:+53459091 MS.gene048584:CDS
TTGAAGAATATAGTGGAGAG+TGG 0.551385 3.3:+53462823 MS.gene048584:CDS
GTTATTGGACACATTGTGGT+TGG 0.552161 3.3:+53462500 MS.gene048584:CDS
GGGTTGATGTGTCCACGTGA+TGG 0.556261 3.3:-53458920 None:intergenic
TTTAAGGCATCAATTACTTG+AGG 0.558300 3.3:-53462127 None:intergenic
GTTGTCCAGAACGCAGCCAC+CGG 0.559166 3.3:-53459241 None:intergenic
TGACATGGTGTGACCAATTG+AGG 0.560689 3.3:+53462452 MS.gene048584:CDS
TTGTGTCCAAGATTAAAGTA+AGG 0.561566 3.3:-53462193 None:intergenic
AGCTAGCAATAAAGAAAGGT+GGG 0.563734 3.3:+53462773 MS.gene048584:CDS
TCTCAGCTAGCAATAAAGAA+AGG 0.564806 3.3:+53462769 MS.gene048584:CDS
GGTTCAAGCTCATAAATTGA+AGG 0.569825 3.3:-53462106 None:intergenic
GGTTGATGTGTCCACGTGAT+GGG 0.577296 3.3:-53458919 None:intergenic
TTGTCACATCCTTCTATAGG+TGG 0.578373 3.3:+53462478 MS.gene048584:CDS
GTCACCAACAACGTTAGGGA+TGG 0.579117 3.3:-53459068 None:intergenic
TGGTTGTTCTTATCAAGTAG+AGG 0.581501 3.3:-53462019 None:intergenic
TTGAAGATTGGAAAATTGGG+TGG 0.582495 3.3:+53462611 MS.gene048584:CDS
ATAGATTGAAACATATGTGT+GGG 0.584985 3.3:+53462413 MS.gene048584:CDS
AAATGGAAGCACCGTTCGAG+CGG 0.585082 3.3:+53459125 MS.gene048584:CDS
CAGCTAGCAATAAAGAAAGG+TGG 0.586018 3.3:+53462772 MS.gene048584:CDS
AACATATGTGTGGGAAAATG+GGG 0.586799 3.3:+53462422 MS.gene048584:CDS
AATATCTGCTAGACGAACCC+AGG 0.590469 3.3:-53461996 None:intergenic
ATCTTGAAGATGAAACTCCA+TGG 0.604504 3.3:-53458846 None:intergenic
TGATCGATTAACCGCTCGAA+CGG 0.609000 3.3:-53459136 None:intergenic
ATAGTGGTGTTCGATTCTTG+TGG 0.611428 3.3:+53462371 MS.gene048584:CDS
ACTTGCTTAGGTTCATCATG+GGG 0.613350 3.3:-53458940 None:intergenic
CCATTCTTGTGTGACAACAA+AGG 0.613860 3.3:-53458996 None:intergenic
AATAGATTGAAACATATGTG+TGG 0.615244 3.3:+53462412 MS.gene048584:CDS
AATGGCTGATCCATAGCAAG+AGG 0.616160 3.3:-53462571 None:intergenic
TCGCAGATGATAAACGTCAC+TGG 0.620024 3.3:-53459172 None:intergenic
GACATGGTGTGACCAATTGA+GGG 0.627094 3.3:+53462453 MS.gene048584:CDS
GGTGGTTATTGGACACATTG+TGG 0.638646 3.3:+53462496 MS.gene048584:CDS
CAGTTCATGTTGGAAACCGG+AGG 0.641575 3.3:+53459212 MS.gene048584:CDS
CAGATGATAAACGTCACTGG+TGG 0.678654 3.3:-53459169 None:intergenic
AAACCGGAGGAATATTCCGG+TGG 0.703022 3.3:+53459225 MS.gene048584:CDS
GTTGTTCCATACCCATCACG+TGG 0.709653 3.3:+53458908 MS.gene048584:CDS
GTGTGACAACAAAGGTGACA+AGG 0.723257 3.3:-53458988 None:intergenic
GTTCTGGACAACGTCAACGT+CGG 0.742769 3.3:+53459252 MS.gene048584:CDS
GGTATGGAACAACTATCACG+TGG 0.750419 3.3:-53458898 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATATTTGACAAATTTA+CGG + chr3.3:53461782-53461801 MS.gene048584:intron 10.0%
!! ATATAAATTATTAAAAATCC+AGG + chr3.3:53461735-53461754 MS.gene048584:intron 10.0%
!! ATTAATCTCTAAATAATATA+TGG - chr3.3:53460534-53460553 None:intergenic 10.0%
!! CCAAAAAAAAAAATATATAA+AGG + chr3.3:53459615-53459634 MS.gene048584:intron 10.0%
!! TATAAATTATTAAAAATCCA+GGG + chr3.3:53461736-53461755 MS.gene048584:intron 10.0%
!!! AAAATGTATTTAAAATTTGA+CGG + chr3.3:53459536-53459555 MS.gene048584:intron 10.0%
!!! AAATGTTTTTTCATATTAAT+CGG + chr3.3:53460473-53460492 MS.gene048584:intron 10.0%
!!! AGTTTTTTTTTTTTTTTTGA+GGG + chr3.3:53459682-53459701 MS.gene048584:intron 10.0%
!!! CATCATTTTATAAAAAATAA+AGG - chr3.3:53460130-53460149 None:intergenic 10.0%
!!! CCTTTATATATTTTTTTTTT+TGG - chr3.3:53459618-53459637 None:intergenic 10.0%
!!! CTTTATTTTTTATAAAATGA+TGG + chr3.3:53460128-53460147 MS.gene048584:intron 10.0%
!!! TAGTTTTTTTTTTTTTTTTG+AGG + chr3.3:53459681-53459700 MS.gene048584:intron 10.0%
!! AAATTCTTTCAAAAAGTTAA+AGG + chr3.3:53461175-53461194 MS.gene048584:intron 15.0%
!! AACTTCTTAAAAACAATTTA+AGG + chr3.3:53460049-53460068 MS.gene048584:intron 15.0%
!! AATAAATGTATTTAGTAGAT+TGG + chr3.3:53459861-53459880 MS.gene048584:intron 15.0%
!! AATATATTTGACAAATTTAC+GGG + chr3.3:53461783-53461802 MS.gene048584:intron 15.0%
!! AATCTACTAAATACATTTAT+TGG - chr3.3:53459862-53459881 None:intergenic 15.0%
!! TTACAAATTACTTAAAGTTT+AGG - chr3.3:53461621-53461640 None:intergenic 15.0%
!! TTCTCTTTCAAAAAAATTTA+AGG + chr3.3:53460076-53460095 MS.gene048584:intron 15.0%
!! TTTATTGATAAAGAAATTCA+TGG + chr3.3:53462687-53462706 MS.gene048584:CDS 15.0%
!!! AATGTTTTTTCATATTAATC+GGG + chr3.3:53460474-53460493 MS.gene048584:intron 15.0%
!!! ACATATTATTTGAAGTTTTA+GGG + chr3.3:53461667-53461686 MS.gene048584:intron 15.0%
!!! ATCGTAAATTTTATTTTTGA+AGG - chr3.3:53460104-53460123 None:intergenic 15.0%
!!! ATGCTATTATTTTTTAGTAT+AGG + chr3.3:53461811-53461830 MS.gene048584:intron 15.0%
!!! GGATATATGTATTTAATTTA+TGG - chr3.3:53460288-53460307 None:intergenic 15.0%
!!! TACATATTATTTGAAGTTTT+AGG + chr3.3:53461666-53461685 MS.gene048584:intron 15.0%
!!! TATATGTATTTAATTTATGG+CGG - chr3.3:53460285-53460304 None:intergenic 15.0%
!!! TCAATTAAAAAACTAGTTTA+AGG - chr3.3:53461595-53461614 None:intergenic 15.0%
!!! TGCTATTATTTTTTAGTATA+GGG + chr3.3:53461812-53461831 MS.gene048584:intron 15.0%
!!! TTAAATTTTTTTGAAAGAGA+AGG - chr3.3:53460077-53460096 None:intergenic 15.0%
!! AATAAATGTACTTAGTAGAT+TGG + chr3.3:53459905-53459924 MS.gene048584:intron 20.0%
!! ACAATAATCTTACTAATCAA+TGG - chr3.3:53462592-53462611 None:intergenic 20.0%
!! ATAAAGACCCAAAAAAAAAA+TGG + chr3.3:53461321-53461340 MS.gene048584:intron 20.0%
!! ATAGTGCAAATATTCTAAAT+AGG - chr3.3:53460702-53460721 None:intergenic 20.0%
!! ATCTCTAAATAATATATGGT+TGG - chr3.3:53460530-53460549 None:intergenic 20.0%
!! ATTTAAAAATCATCAACTTG+TGG - chr3.3:53461212-53461231 None:intergenic 20.0%
!! TAACAATATCTTTACACAAT+TGG - chr3.3:53460309-53460328 None:intergenic 20.0%
!! TACATCAAAATTAAACTCAT+TGG - chr3.3:53459436-53459455 None:intergenic 20.0%
!! TTATGAAATACACTAATTGA+AGG - chr3.3:53460155-53460174 None:intergenic 20.0%
!!! AAAAAATGAAAATTTTGAGC+AGG - chr3.3:53461508-53461527 None:intergenic 20.0%
!!! AAAAATGAAAATTTTGAGCA+GGG - chr3.3:53461507-53461526 None:intergenic 20.0%
!!! ATTATTTTTTGTGCAGAAAA+TGG + chr3.3:53461941-53461960 MS.gene048584:intron 20.0%
!!! CAAGTTTTTATACATACAAA+GGG - chr3.3:53459763-53459782 None:intergenic 20.0%
!!! TAGTTTTGTTTAACAGTTAA+AGG + chr3.3:53461149-53461168 MS.gene048584:intron 20.0%
!!! TCAAGTTTTTATACATACAA+AGG - chr3.3:53459764-53459783 None:intergenic 20.0%
!!! TTAAGTTTAAAATTGTGCAT+TGG + chr3.3:53460864-53460883 MS.gene048584:intron 20.0%
! AACATACCTTACTTTAATCT+TGG + chr3.3:53462187-53462206 MS.gene048584:CDS 25.0%
! AAGTTTATAGATGTTGTTGA+AGG + chr3.3:53459091-53459110 MS.gene048584:CDS 25.0%
! AATAGATTGAAACATATGTG+TGG + chr3.3:53462412-53462431 MS.gene048584:CDS 25.0%
! AATGAACCTTAAAGTATATC+TGG - chr3.3:53460951-53460970 None:intergenic 25.0%
! ACAATTCCAATTTACACAAT+TGG + chr3.3:53462160-53462179 MS.gene048584:CDS 25.0%
! AGATTAAAGTAAGGTATGTT+TGG - chr3.3:53462187-53462206 None:intergenic 25.0%
! ATAGATTGAAACATATGTGT+GGG + chr3.3:53462413-53462432 MS.gene048584:CDS 25.0%
! ATGTACAAAACAGAATCTTT+AGG - chr3.3:53462286-53462305 None:intergenic 25.0%
! ATGTATTTAGTAGATTGGAA+TGG + chr3.3:53459866-53459885 MS.gene048584:intron 25.0%
! ATGTTTATATTTAGTGACTG+AGG + chr3.3:53459971-53459990 MS.gene048584:intron 25.0%
! ATTATATTCCATCAAATTCC+TGG + chr3.3:53461978-53461997 MS.gene048584:CDS 25.0%
! ATTGTTGAAGATTGGAAAAT+TGG + chr3.3:53462607-53462626 MS.gene048584:CDS 25.0%
! CTAAATAGGTCAAGTAATAT+GGG - chr3.3:53460688-53460707 None:intergenic 25.0%
! GATAAAGAAATTCATGGATT+TGG + chr3.3:53462693-53462712 MS.gene048584:CDS 25.0%
! GTAAGATTATTGTTGAAGAT+TGG + chr3.3:53462599-53462618 MS.gene048584:CDS 25.0%
! TAACCAATCTTTGTAACTTT+GGG - chr3.3:53462254-53462273 None:intergenic 25.0%
! TAACGTGATGATAGATATAA+TGG + chr3.3:53461015-53461034 MS.gene048584:intron 25.0%
! TCACATTTCAAAATACTTAG+TGG + chr3.3:53459794-53459813 MS.gene048584:intron 25.0%
! TCTAAATAGGTCAAGTAATA+TGG - chr3.3:53460689-53460708 None:intergenic 25.0%
! TCTCTAAATGCTACTAATAA+TGG + chr3.3:53462223-53462242 MS.gene048584:CDS 25.0%
! TGTATTTAGTAGATTGGAAT+GGG + chr3.3:53459867-53459886 MS.gene048584:intron 25.0%
! TTAACCAATCTTTGTAACTT+TGG - chr3.3:53462255-53462274 None:intergenic 25.0%
! TTATATTCCATCAAATTCCT+GGG + chr3.3:53461979-53461998 MS.gene048584:CDS 25.0%
! TTGTTGAAGATTGGAAAATT+GGG + chr3.3:53462608-53462627 MS.gene048584:CDS 25.0%
!! AAAATGAAAATTTTGAGCAG+GGG - chr3.3:53461506-53461525 None:intergenic 25.0%
!! TCTGTTTTGTACATTTCATA+TGG + chr3.3:53462292-53462311 MS.gene048584:CDS 25.0%
!!! AATTGTGAGCTTTGATTTTA+AGG - chr3.3:53462146-53462165 None:intergenic 25.0%
!!! ACAAACGTCCATTTTTTTTT+TGG - chr3.3:53461332-53461351 None:intergenic 25.0%
!!! ACATTTATTGGTTGTTTCTA+AGG - chr3.3:53459850-53459869 None:intergenic 25.0%
!!! AGCTTTTTTGAAGAATATAG+TGG + chr3.3:53462816-53462835 MS.gene048584:CDS 25.0%
!!! ATAATTTTTTAACATGTCCC+TGG - chr3.3:53461756-53461775 None:intergenic 25.0%
!!! ATGGATTTGGATTTTGATAT+AGG + chr3.3:53462706-53462725 MS.gene048584:CDS 25.0%
!!! ATTTGGATTTTGATATAGGA+AGG + chr3.3:53462710-53462729 MS.gene048584:CDS 25.0%
!!! CAAACGTCCATTTTTTTTTT+GGG - chr3.3:53461331-53461350 None:intergenic 25.0%
!!! TTATTGAAGGTGTTTTTTCT+GGG + chr3.3:53462530-53462549 MS.gene048584:CDS 25.0%
!!! TTTGGATTTTGATATAGGAA+GGG + chr3.3:53462711-53462730 MS.gene048584:CDS 25.0%
AAAAAAAATGGACGTTTGTC+AGG + chr3.3:53461333-53461352 MS.gene048584:intron 30.0%
AAAAAAATGGACGTTTGTCA+GGG + chr3.3:53461334-53461353 MS.gene048584:intron 30.0%
AAACATATGTGTGGGAAAAT+GGG + chr3.3:53462421-53462440 MS.gene048584:CDS 30.0%
AAGTAAGATCTACATCTGAA+CGG + chr3.3:53460246-53460265 MS.gene048584:intron 30.0%
ACAAAACAGAATCTTTAGGT+TGG - chr3.3:53462282-53462301 None:intergenic 30.0%
ACCTTTATATTTAAGCACGT+AGG - chr3.3:53459585-53459604 None:intergenic 30.0%
ATAAAATCCGATGTGTAAGT+TGG - chr3.3:53460418-53460437 None:intergenic 30.0%
ATGTACTTAGTAGATTGGAA+TGG + chr3.3:53459910-53459929 MS.gene048584:intron 30.0%
ATTCATTTGCGTTCTTGAAA+CGG - chr3.3:53462329-53462348 None:intergenic 30.0%
CTGTTTGAGAATTCTTAAAC+TGG - chr3.3:53461839-53461858 None:intergenic 30.0%
GCAAGAGGAAATGTTAAAAA+AGG - chr3.3:53462559-53462578 None:intergenic 30.0%
GTATTTAGTAGATTGGAATG+GGG + chr3.3:53459868-53459887 MS.gene048584:intron 30.0%
TCAAAATACTTAGTGGTATC+AGG + chr3.3:53459801-53459820 MS.gene048584:intron 30.0%
TCAACTAGGTCAAGTAATAT+GGG + chr3.3:53460901-53460920 MS.gene048584:intron 30.0%
TCCTACGTGCTTAAATATAA+AGG + chr3.3:53459581-53459600 MS.gene048584:intron 30.0%
TGATGATAGATATAATGGCA+TGG + chr3.3:53461020-53461039 MS.gene048584:intron 30.0%
TGTAATTATGTCCTCGAATT+GGG + chr3.3:53461636-53461655 MS.gene048584:intron 30.0%
TGTACTTAGTAGATTGGAAT+GGG + chr3.3:53459911-53459930 MS.gene048584:intron 30.0%
TTGTAATTATGTCCTCGAAT+TGG + chr3.3:53461635-53461654 MS.gene048584:intron 30.0%
TTGTGTCCAAGATTAAAGTA+AGG - chr3.3:53462196-53462215 None:intergenic 30.0%
TTTAACATTTCCTCTTGCTA+TGG + chr3.3:53462561-53462580 MS.gene048584:CDS 30.0%
TTTGGACCAATTGTGTAAAT+TGG - chr3.3:53462169-53462188 None:intergenic 30.0%
! ACAACCAACAAATTTTGCAA+TGG + chr3.3:53462035-53462054 MS.gene048584:CDS 30.0%
! CAACCAACAAATTTTGCAAT+GGG + chr3.3:53462036-53462055 MS.gene048584:CDS 30.0%
! GATTCAACTTTTATGTTGTC+TGG - chr3.3:53459049-53459068 None:intergenic 30.0%
! TTTAAGGCATCAATTACTTG+AGG - chr3.3:53462130-53462149 None:intergenic 30.0%
! TTTTGATCCAACTTACACAT+CGG + chr3.3:53460408-53460427 MS.gene048584:intron 30.0%
!! AAAGTTGATTTGACGACATT+TGG - chr3.3:53461071-53461090 None:intergenic 30.0%
!! ACTTTTATGTTGTCTGGTTT+TGG - chr3.3:53459043-53459062 None:intergenic 30.0%
!!! GTTATTGAAGGTGTTTTTTC+TGG + chr3.3:53462529-53462548 MS.gene048584:CDS 30.0%
!!! TATTGAAGGTGTTTTTTCTG+GGG + chr3.3:53462531-53462550 MS.gene048584:CDS 30.0%
!!! TTTTGGTTCAGAGTTTACTA+AGG - chr3.3:53459026-53459045 None:intergenic 30.0%
AACATATGTGTGGGAAAATG+GGG + chr3.3:53462422-53462441 MS.gene048584:CDS 35.0%
AAGTCCTTGACAAATGAAGT+CGG - chr3.3:53461470-53461489 None:intergenic 35.0%
AGATAAAGTCTTACACGTAC+TGG - chr3.3:53461046-53461065 None:intergenic 35.0%
AGCTAGCAATAAAGAAAGGT+GGG + chr3.3:53462773-53462792 MS.gene048584:CDS 35.0%
AGGGATCCAGATATACTTTA+AGG + chr3.3:53460942-53460961 MS.gene048584:intron 35.0%
ATAGGTCAAGTAATATGGGA+CGG - chr3.3:53460684-53460703 None:intergenic 35.0%
ATCCTTCTATAGGTGGTTAT+TGG + chr3.3:53462485-53462504 MS.gene048584:CDS 35.0%
ATTTGTCAAGGACTTTGCAA+GGG + chr3.3:53461475-53461494 MS.gene048584:intron 35.0%
GAAACATATGTGTGGGAAAA+TGG + chr3.3:53462420-53462439 MS.gene048584:CDS 35.0%
GGATGATAAGTTAGACACTT+TGG + chr3.3:53462645-53462664 MS.gene048584:CDS 35.0%
GGTTCAAGCTCATAAATTGA+AGG - chr3.3:53462109-53462128 None:intergenic 35.0%
GGTTGGAATTCTGTTATTGA+AGG + chr3.3:53462517-53462536 MS.gene048584:CDS 35.0%
GTAACCGTTTATTCAGAACA+GGG + chr3.3:53459823-53459842 MS.gene048584:intron 35.0%
GTACTTAGTAGATTGGAATG+GGG + chr3.3:53459912-53459931 MS.gene048584:intron 35.0%
GTATTGTCACATCCTTCTAT+AGG + chr3.3:53462475-53462494 MS.gene048584:CDS 35.0%
GTCAACTAGGTCAAGTAATA+TGG + chr3.3:53460900-53460919 MS.gene048584:intron 35.0%
TCTCAGCTAGCAATAAAGAA+AGG + chr3.3:53462769-53462788 MS.gene048584:CDS 35.0%
TGGTTGTTCTTATCAAGTAG+AGG - chr3.3:53462022-53462041 None:intergenic 35.0%
TGTATTTGAATCCCAATTCG+AGG - chr3.3:53461650-53461669 None:intergenic 35.0%
TTGAAGATTGGAAAATTGGG+TGG + chr3.3:53462611-53462630 MS.gene048584:CDS 35.0%
! AGACACTTTGGTGATAAAAG+AGG + chr3.3:53462657-53462676 MS.gene048584:CDS 35.0%
! TTGAAGAATATAGTGGAGAG+TGG + chr3.3:53462823-53462842 MS.gene048584:CDS 35.0%
!! TGAAGGTGTTATGACTGAAA+TGG + chr3.3:53459108-53459127 MS.gene048584:CDS 35.0%
!!! TTTTACTCTAAGACTTCAGC+TGG + chr3.3:53460977-53460996 MS.gene048584:intron 35.0%
AACTTGTCACCAACAACGTT+AGG - chr3.3:53459076-53459095 None:intergenic 40.0%
AATTGGGTGGAGAGTGAAAA+AGG + chr3.3:53462624-53462643 MS.gene048584:CDS 40.0%
ACAAAGGTGACAAGGATGTT+AGG - chr3.3:53458983-53459002 None:intergenic 40.0%
ACAACGCAAGCATTTAGGTA+AGG + chr3.3:53459306-53459325 MS.gene048584:intron 40.0%
ACTTGCTTAGGTTCATCATG+GGG - chr3.3:53458943-53458962 None:intergenic 40.0%
ACTTGTCACCAACAACGTTA+GGG - chr3.3:53459075-53459094 None:intergenic 40.0%
ATAGTGGTGTTCGATTCTTG+TGG + chr3.3:53462371-53462390 MS.gene048584:CDS 40.0%
CAAAGGTGACAAGGATGTTA+GGG - chr3.3:53458982-53459001 None:intergenic 40.0%
CAAATGAAGTCGGTTGGAAT+AGG - chr3.3:53461460-53461479 None:intergenic 40.0%
CAGCTAGCAATAAAGAAAGG+TGG + chr3.3:53462772-53462791 MS.gene048584:CDS 40.0%
CATTTGTCAAGGACTTTGCA+AGG + chr3.3:53461474-53461493 MS.gene048584:intron 40.0%
CCATTCTTGTGTGACAACAA+AGG - chr3.3:53458999-53459018 None:intergenic 40.0%
CTAGGTCAAGTAATATGGGA+CGG + chr3.3:53460905-53460924 MS.gene048584:intron 40.0%
CTGCCCAAAGTTACAAAGAT+TGG + chr3.3:53462248-53462267 MS.gene048584:CDS 40.0%
GAGCCCATTGCAAAATTTGT+TGG - chr3.3:53462042-53462061 None:intergenic 40.0%
GATGTGACAATACCCTCAAT+TGG - chr3.3:53462468-53462487 None:intergenic 40.0%
GCTTGCGTTGTAGGAAAATA+TGG - chr3.3:53459297-53459316 None:intergenic 40.0%
GGTAACCGTTTATTCAGAAC+AGG + chr3.3:53459822-53459841 MS.gene048584:intron 40.0%
GTCCAATAACCACCTATAGA+AGG - chr3.3:53462490-53462509 None:intergenic 40.0%
GTTATTGGACACATTGTGGT+TGG + chr3.3:53462500-53462519 MS.gene048584:CDS 40.0%
TACCTAAATGCTTGCGTTGT+AGG - chr3.3:53459306-53459325 None:intergenic 40.0%
TAGTGGTGTTCGATTCTTGT+GGG + chr3.3:53462372-53462391 MS.gene048584:CDS 40.0%
TTCCTACAACGCAAGCATTT+AGG + chr3.3:53459301-53459320 MS.gene048584:CDS 40.0%
TTGTCACATCCTTCTATAGG+TGG + chr3.3:53462478-53462497 MS.gene048584:CDS 40.0%
! AGGTCCCTGTTCTGAATAAA+CGG - chr3.3:53459830-53459849 None:intergenic 40.0%
! CCTTTGTTGTCACACAAGAA+TGG + chr3.3:53458996-53459015 MS.gene048584:CDS 40.0%
! CTGCGATTGTTTCCTCTTTT+GGG + chr3.3:53459189-53459208 MS.gene048584:CDS 40.0%
! GACTTGCTTAGGTTCATCAT+GGG - chr3.3:53458944-53458963 None:intergenic 40.0%
! GGTTAATCGATCAGCTTGTT+CGG + chr3.3:53459146-53459165 MS.gene048584:CDS 40.0%
! TCTGCGATTGTTTCCTCTTT+TGG + chr3.3:53459188-53459207 MS.gene048584:CDS 40.0%
!! GACGGAGGGAGTATTATTAA+GGG + chr3.3:53460923-53460942 MS.gene048584:intron 40.0%
!! GGGCTCTAAAAAGTTGTCAA+TGG + chr3.3:53462056-53462075 MS.gene048584:CDS 40.0%
!! TAGAGACAAGTGACTTGCTT+AGG - chr3.3:53458955-53458974 None:intergenic 40.0%
!! TGACTTGCTTAGGTTCATCA+TGG - chr3.3:53458945-53458964 None:intergenic 40.0%
!!! ATAGTCGCTTTTGGTGATTG+TGG - chr3.3:53458872-53458891 None:intergenic 40.0%
AAACCTATGGGAAACTTGCG+AGG + chr3.3:53461371-53461390 MS.gene048584:intron 45.0%
AAATGGGGTTTGTGGTGACA+TGG + chr3.3:53462437-53462456 MS.gene048584:CDS 45.0%
AACCTATGGGAAACTTGCGA+GGG + chr3.3:53461372-53461391 MS.gene048584:intron 45.0%
AATATCTGCTAGACGAACCC+AGG - chr3.3:53461999-53462018 None:intergenic 45.0%
AATGGCTGATCCATAGCAAG+AGG - chr3.3:53462574-53462593 None:intergenic 45.0%
AGACGAACCCAGGAATTTGA+TGG - chr3.3:53461989-53462008 None:intergenic 45.0%
ATACCAACCAGATCGAACCA+TGG + chr3.3:53460646-53460665 MS.gene048584:intron 45.0%
ATGAAGTCGGTTGGAATAGG+TGG - chr3.3:53461457-53461476 None:intergenic 45.0%
CAACATGAACTGCCCAAAAG+AGG - chr3.3:53459204-53459223 None:intergenic 45.0%
CAGATGATAAACGTCACTGG+TGG - chr3.3:53459172-53459191 None:intergenic 45.0%
CCTTGACAAATGAAGTCGGT+TGG - chr3.3:53461466-53461485 None:intergenic 45.0%
GAATCCATCCCTAACGTTGT+TGG + chr3.3:53459064-53459083 MS.gene048584:CDS 45.0%
GACATGGTGTGACCAATTGA+GGG + chr3.3:53462453-53462472 MS.gene048584:CDS 45.0%
GGTATGGAACAACTATCACG+TGG - chr3.3:53458901-53458920 None:intergenic 45.0%
GGTGGTTATTGGACACATTG+TGG + chr3.3:53462496-53462515 MS.gene048584:CDS 45.0%
GTATGATCCATGGTTCGATC+TGG - chr3.3:53460656-53460675 None:intergenic 45.0%
GTCAAGTAATATGGGACGGA+GGG + chr3.3:53460909-53460928 MS.gene048584:intron 45.0%
GTCAAGTAATATGGGACGGA+GGG - chr3.3:53460928-53460909 None:intergenic 45.0%
GTGTGACAACAAAGGTGACA+AGG - chr3.3:53458991-53459010 None:intergenic 45.0%
TCGCAGATGATAAACGTCAC+TGG - chr3.3:53459175-53459194 None:intergenic 45.0%
TGACATGGTGTGACCAATTG+AGG + chr3.3:53462452-53462471 MS.gene048584:CDS 45.0%
TGATCGATTAACCGCTCGAA+CGG - chr3.3:53459139-53459158 None:intergenic 45.0%
TGGAAACCGGAGGAATATTC+CGG + chr3.3:53459222-53459241 MS.gene048584:CDS 45.0%
TTGTCGGCGGTTAAACCTAT+GGG + chr3.3:53461359-53461378 MS.gene048584:intron 45.0%
TTTGTCGGCGGTTAAACCTA+TGG + chr3.3:53461358-53461377 MS.gene048584:intron 45.0%
! CCAACCGACTTCATTTGTCA+AGG + chr3.3:53461463-53461482 MS.gene048584:intron 45.0%
! CTATGCAAGGGCTTTTGTCA+GGG - chr3.3:53461404-53461423 None:intergenic 45.0%
! CTCTTTTGGGCAGTTCATGT+TGG + chr3.3:53459202-53459221 MS.gene048584:CDS 45.0%
! TTGTGCATTGGCATACGTGA+CGG + chr3.3:53460876-53460895 MS.gene048584:intron 45.0%
!! GACGTTTGTCAGGGTTTTGT+CGG + chr3.3:53461343-53461362 MS.gene048584:intron 45.0%
!! GGACGGAGGGAGTATTATTA+AGG + chr3.3:53460922-53460941 MS.gene048584:intron 45.0%
!! TGGCTCTTGATAGTCGCTTT+TGG - chr3.3:53458881-53458900 None:intergenic 45.0%
!! TAATAATAAAAATAAAGAAT+AGG + chr3.3:53460172-53460191 MS.gene048584:intron 5.0%
!!! TTTTTAAACTAAAAAAAATA+TGG + chr3.3:53461235-53461254 MS.gene048584:intron 5.0%
AAACCGGAGGAATATTCCGG+TGG + chr3.3:53459225-53459244 MS.gene048584:CDS 50.0%
AACGTCAACGTCGGAGTTGT+GGG + chr3.3:53459261-53459280 MS.gene048584:CDS 50.0%
CAGTTCATGTTGGAAACCGG+AGG + chr3.3:53459212-53459231 MS.gene048584:CDS 50.0%
GATCCATGGTTCGATCTGGT+TGG - chr3.3:53460652-53460671 None:intergenic 50.0%
GCATCTGCATTGCACGATAG+TGG + chr3.3:53462355-53462374 MS.gene048584:CDS 50.0%
GGGCAGTTCATGTTGGAAAC+CGG + chr3.3:53459209-53459228 MS.gene048584:CDS 50.0%
GGTCAAGTAATATGGGACGG+AGG + chr3.3:53460908-53460927 MS.gene048584:intron 50.0%
GGTCAAGTAATATGGGACGG+AGG - chr3.3:53460927-53460908 None:intergenic 50.0%
GTCACCAACAACGTTAGGGA+TGG - chr3.3:53459071-53459090 None:intergenic 50.0%
GTGTGGGAAAATGGGGTTTG+TGG + chr3.3:53462429-53462448 MS.gene048584:CDS 50.0%
GTTGTTCCATACCCATCACG+TGG + chr3.3:53458908-53458927 MS.gene048584:CDS 50.0%
TTCCCTCGCAAGTTTCCCAT+AGG - chr3.3:53461377-53461396 None:intergenic 50.0%
! CATACGTGACGGAGTCAACT+AGG + chr3.3:53460887-53460906 MS.gene048584:intron 50.0%
! GCTATGCAAGGGCTTTTGTC+AGG - chr3.3:53461405-53461424 None:intergenic 50.0%
! GGTTGATGTGTCCACGTGAT+GGG - chr3.3:53458922-53458941 None:intergenic 50.0%
! GTTCTGGACAACGTCAACGT+CGG + chr3.3:53459252-53459271 MS.gene048584:CDS 50.0%
!! AAATGGAAGCACCGTTCGAG+CGG + chr3.3:53459125-53459144 MS.gene048584:CDS 50.0%
!! ATGTGTCCACGTGATGGGTA+TGG - chr3.3:53458917-53458936 None:intergenic 50.0%
!! GTTTGTCAGGGTTTTGTCGG+CGG + chr3.3:53461346-53461365 MS.gene048584:intron 50.0%
AGGTGGCAGAGGCTATGACA+GGG - chr3.3:53461440-53461459 None:intergenic 55.0%
ATATTCCGGTGGCTGCGTTC+TGG + chr3.3:53459236-53459255 MS.gene048584:CDS 55.0%
CAACGTCAACGTCGGAGTTG+TGG + chr3.3:53459260-53459279 MS.gene048584:CDS 55.0%
CAGCCACCGGAATATTCCTC+CGG - chr3.3:53459231-53459250 None:intergenic 55.0%
CTATGACAGGGGTCGAGTGA+GGG - chr3.3:53461428-53461447 None:intergenic 55.0%
TAGGTGGCAGAGGCTATGAC+AGG - chr3.3:53461441-53461460 None:intergenic 55.0%
TATGACAGGGGTCGAGTGAG+GGG - chr3.3:53461427-53461446 None:intergenic 55.0%
TCGAGTGAGGGGCTATGCAA+GGG - chr3.3:53461416-53461435 None:intergenic 55.0%
TCGGTTGGAATAGGTGGCAG+AGG - chr3.3:53461451-53461470 None:intergenic 55.0%
! GACGGAGGGAGTATGATCCA+TGG - chr3.3:53460666-53460685 None:intergenic 55.0%
!! GGGTTGATGTGTCCACGTGA+TGG - chr3.3:53458923-53458942 None:intergenic 55.0%
GCTATGACAGGGGTCGAGTG+AGG - chr3.3:53461429-53461448 None:intergenic 60.0%
GGTGGCAGAGGCTATGACAG+GGG - chr3.3:53461439-53461458 None:intergenic 60.0%
GTCGAGTGAGGGGCTATGCA+AGG - chr3.3:53461417-53461436 None:intergenic 60.0%
GTTGTCCAGAACGCAGCCAC+CGG - chr3.3:53459244-53459263 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 53458848 53462882 53458848 ID=MS.gene048584
chr3.3 mRNA 53458848 53462882 53458848 ID=MS.gene048584.t1;Parent=MS.gene048584
chr3.3 exon 53458848 53459322 53458848 ID=MS.gene048584.t1.exon1;Parent=MS.gene048584.t1
chr3.3 CDS 53458848 53459322 53458848 ID=cds.MS.gene048584.t1;Parent=MS.gene048584.t1
chr3.3 exon 53461957 53462882 53461957 ID=MS.gene048584.t1.exon2;Parent=MS.gene048584.t1
chr3.3 CDS 53461957 53462882 53461957 ID=cds.MS.gene048584.t1;Parent=MS.gene048584.t1
Gene Sequence

>MS.gene048584

ATGGAGTTTCATCTTCAAGATCCACAATCACCAAAAGCGACTATCAAGAGCCACGTGATAGTTGTTCCATACCCATCACGTGGACACATCAACCCCATGATGAACCTAAGCAAGTCACTTGTCTCTAATAACCCTAACATCCTTGTCACCTTTGTTGTCACACAAGAATGGCTAACCTTAGTAAACTCTGAACCAAAACCAGACAACATAAAAGTTGAATCCATCCCTAACGTTGTTGGTGACAAGTTTATAGATGTTGTTGAAGGTGTTATGACTGAAATGGAAGCACCGTTCGAGCGGTTAATCGATCAGCTTGTTCGGCCACCAGTGACGTTTATCATCTGCGATTGTTTCCTCTTTTGGGCAGTTCATGTTGGAAACCGGAGGAATATTCCGGTGGCTGCGTTCTGGACAACGTCAACGTCGGAGTTGTGGGTGCAATTTTTCCATATTTTCCTACAACGCAAGCATTTAGGTAAGGACAATTTTTTTATATAGTTATGTTATTTTCACAATTTTTAGTCTTTAAGTATTAATTATTTAAAAAACAAAATGTATAATATATTATAATTTTTTTATAAAATACCAATGAGTTTAATTTTGATGTAGTTTCATATAAAAGAAATGCACTATCAACAAATTACACTCGTTCATATTTATGATTTATAAAGTAATTATAATAAAAGTTAAAATGTATTTAAAATTTGACGGTTATGATTGATTGATATGTATTTCCTACGTGCTTAAATATAAAGGTTTATTTTGTACCAAAAAAAAAAATATATAAAGGTTTATTGTAAATTTCAGTTTTATCAAGAAAATTTATAGTAGTATAGTTTTTTTTTTTTTTTTGAGGGAAAATTTAGTAATATAGTTAGAAAGTTTATTTTATGTATGAATGTACATAAAATACCCTTTGTATGTATAAAAACTTGATGTTGATTTTTCACATTTCAAAATACTTAGTGGTATCAGGTAACCGTTTATTCAGAACAGGGACCTTAGAAACAACCAATAAATGTATTTAGTAGATTGGAATGGGGATTATATTTAAAGAAATAAATGTACTTAGTAGATTGGAATGGGGATTATATTTAAAGATAAACTTTATTTTGTCAAATTTATGTTTATATTTAGTGACTGAGGAAGTAGATTTTTTTTGCAATTATAGTTTATATAAATTAAGAATGTGTCTAATATGAACTTCTTAAAAACAATTTAAGGATCCTTCTCTTTCAAAAAAATTTAAGGATCCTTCAAAAATAAAATTTACGATGAACCTTTATTTTTTATAAAATGATGGACCTTCAATTAGTGTATTTCATAATAATAAAAATAAAGAATAGGCATAATATATTTTATTAAAATTAGTAAGATCTACATCTTATTTCAAAAAAAAAGTAAGATCTACATCTGAACGGTGCATAGTAGACGCCGCCATAAATTAAATACATATATCCAATTGTGTAAAGATATTGTTAGATAAATACATATTTTCTTTCAAAAAAAAGAAGATAAATACATTTTTAAACAATCATATTTGTTTTTATTATACAAACATTTTGATCCAACTTACACATCGGATTTTATTTATTAAAACAAGAATAGTAGTTGAATATTCTGACAAATGTTTTTTCATATTAATCGGGAACTATAGATTAAACGATTAATTAAAAGATCCAACCATATATTATTTAGAGATTAATTATTTTAAACTAACTGAGATCTATTTTTTTTTTTTTGATAAACAACTGAAATTTATTTAAGAAATAATATCTTTTTCAATGAATGTCTTTTCATACCAACCAGATCGAACCATGGATCATACTCCCTCCGTCCCATATTACTTGACCTATTTAGAATATTTGCACTATTCATGTAACATGTTTTGACTCTATTTTTCTATTAATATATAAAAACAAAATATAGCATATAAGATGTTGTTAGATTTATCTCGATTAATATTTTCAAAATATCAAATTTTCGTAATTTTTTCTACTAGATTATTAAAGAAATTTAAGTTTAAAATTGTGCATTGGCATACGTGACGGAGTCAACTAGGTCAAGTAATATGGGACGGAGGGAGTATTATTAAGGGATCCAGATATACTTTAAGGTTCATTTTAAAATTTTACTCTAAGACTTCAGCTGGTAATAATAGACTGCATAACGTGATGATAGATATAATGGCATGGCCAGTACGTGTAAGACTTTATCTAACCAAATGTCGTCAAATCAACTTTTTTTTTTTGTTTTTACTTGTTGTAATAGAATAGCAGAAAGAAGAATCTAGATCTACAATAGTTTTGTTTAACAGTTAAAGGTTTAAATTCTTTCAAAAAGTTAAAGGTTTAAATTATTCCACAAGTTGATGATTTTTAAATAGATTTTTAAACTAAAAAAAATATGGTATTAAACTCACTACAAGAAATATGTCAATTTGTCAAGAGCACAAAATCTCTATTAAAAGCGCATAAAGACCCAAAAAAAAAATGGACGTTTGTCAGGGTTTTGTCGGCGGTTAAACCTATGGGAAACTTGCGAGGGAAAAGACCCTGACAAAAGCCCTTGCATAGCCCCTCACTCGACCCCTGTCATAGCCTCTGCCACCTATTCCAACCGACTTCATTTGTCAAGGACTTTGCAAGGGACATGCCCCTGCTCAAAATTTTCATTTTTTTAAAAATAAAAATTATTTAAAAAATCAATAATAAGTTGATTAAAAATCATTTTCATTTGTACATCCTTAAACTAGTTTTTTAATTGAACACCTAAACTTTAAGTAATTTGTAATTATGTCCTCGAATTGGGATTCAAATACATATTATTTGAAGTTTTAGGGATTTAATTAAAATTAATTATTTAAAAGTTTAAGAGAGATAAATGAATATAAATTATTAAAAATCCAGGGACATGTTAAAAAATTATCTAATTAAATATATTTGACAAATTTACGGGCACACATGCTATTATTTTTTAGTATAGGGTCCAGTTTAAGAATTCTCAAACAGTTTTGACATGTTAAAATGACATGAAAAGTGAGTGACACATTATATTTTCAATCATAAGTTCATAACTGAATAAACACAAACTATTATTTTTTGTGCAGAAAATGGTGAAGATTATATCGATTATATTCCATCAAATTCCTGGGTTCGTCTAGCAGATATTCCTCTACTTGATAAGAACAACCAACAAATTTTGCAATGGGCTCTAAAAAGTTGTCAATGGCTTCTCAAAGCACAATATCTATTACTACCTTCAATTTATGAGCTTGAACCTCAAGTAATTGATGCCTTAAAATCAAAGCTCACAATTCCAATTTACACAATTGGTCCAAACATACCTTACTTTAATCTTGGACACAACTCAAATTCTCTAAATGCTACTAATAATGGTGCTGCCCAAAGTTACAAAGATTGGTTAAATCTCCAACCTAAAGATTCTGTTTTGTACATTTCATATGGAAGTTATCTATCCGTTTCAAGAACGCAAATGAATGAAATTGCATCTGCATTGCACGATAGTGGTGTTCGATTCTTGTGGGTAACGCGCGACGAGACTAATAGATTGAAACATATGTGTGGGAAAATGGGGTTTGTGGTGACATGGTGTGACCAATTGAGGGTATTGTCACATCCTTCTATAGGTGGTTATTGGACACATTGTGGTTGGAATTCTGTTATTGAAGGTGTTTTTTCTGGGGTTCCTTTTTTAACATTTCCTCTTGCTATGGATCAGCCATTGATTAGTAAGATTATTGTTGAAGATTGGAAAATTGGGTGGAGAGTGAAAAAGGATGATAAGTTAGACACTTTGGTGATAAAAGAGGAAATTGTTTTATTGATAAAGAAATTCATGGATTTGGATTTTGATATAGGAAGGGATTTGAGAAAAAGAGCAAAAGAATTTCAGCTTTTATCTCAGCTAGCAATAAAGAAAGGTGGGTCATCTGCAAGTAACGTTAAAGCTTTTTTGAAGAATATAGTGGAGAGTGGTTTGACACATGAAGCATCAAATGGAATACATAGTTGA
Protein sequence

>MS.gene048584.t1

MEFHLQDPQSPKATIKSHVIVVPYPSRGHINPMMNLSKSLVSNNPNILVTFVVTQEWLTLVNSEPKPDNIKVESIPNVVGDKFIDVVEGVMTEMEAPFERLIDQLVRPPVTFIICDCFLFWAVHVGNRRNIPVAAFWTTSTSELWVQFFHIFLQRKHLENGEDYIDYIPSNSWVRLADIPLLDKNNQQILQWALKSCQWLLKAQYLLLPSIYELEPQVIDALKSKLTIPIYTIGPNIPYFNLGHNSNSLNATNNGAAQSYKDWLNLQPKDSVLYISYGSYLSVSRTQMNEIASALHDSGVRFLWVTRDETNRLKHMCGKMGFVVTWCDQLRVLSHPSIGGYWTHCGWNSVIEGVFSGVPFLTFPLAMDQPLISKIIVEDWKIGWRVKKDDKLDTLVIKEEIVLLIKKFMDLDFDIGRDLRKRAKEFQLLSQLAIKKGGSSASNVKAFLKNIVESGLTHEASNGIHS