AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene040439

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene040439.t1 MTR_7g029115 91.655 719 43 1 52 770 1 702 0.0 1304
MS.gene040439.t1 MTR_3g115250 71.267 797 177 9 3 754 1 790 0.0 1089
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene040439.t1 AT1G42440 58.020 798 280 11 3 753 1 790 0.0 917

Find 158 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCAATGCCTTTCTGTATTT+AGG 0.205408 7.4:-72518057 MS.gene040439:CDS
AGAGGATGTTAAATTCTTTA+AGG 0.213886 7.4:-72512070 MS.gene040439:intron
AAGAATCTGTCCTTCATTTC+AGG 0.226133 7.4:-72512978 MS.gene040439:intron
AGTCTATTCGGAATTCTATA+TGG 0.254313 7.4:-72513327 MS.gene040439:CDS
GAATCTGAAGCAGAGCTTAA+AGG 0.271947 7.4:+72511629 None:intergenic
TTTGTTCAGGTTCATGTATC+AGG 0.277316 7.4:-72517194 MS.gene040439:intron
TCTACAATACTCCCAGGATT+TGG 0.290398 7.4:-72518649 MS.gene040439:CDS
TTTGTTCCATCAGCCTCATT+TGG 0.297607 7.4:+72514369 None:intergenic
TAACTCTTCCTTGGATTTGA+TGG 0.304439 7.4:+72512803 None:intergenic
GACGCGGTTTGCAAAATATA+AGG 0.305864 7.4:-72513356 MS.gene040439:CDS
CGATATTCTAATCTTATATT+CGG 0.320602 7.4:+72518606 None:intergenic
CTTTCTGTATTTAGGTCTCT+TGG 0.321593 7.4:-72518049 MS.gene040439:CDS
CCGTCAGAATAACGCGCTTC+AGG 0.325079 7.4:+72512455 None:intergenic
TACCAACCGGTTCTTTAATT+CGG 0.327324 7.4:+72511885 None:intergenic
TAATATTTCATGTTGGGTTT+CGG 0.340526 7.4:-72512782 MS.gene040439:CDS
TCCGGGAACATCAGAATATC+AGG 0.340978 7.4:-72514298 MS.gene040439:intron
TCTCAGTACATTGATTCGTT+TGG 0.345900 7.4:-72518082 MS.gene040439:CDS
GATGAAGAGGAGTCAGATTA+TGG 0.348630 7.4:-72513841 MS.gene040439:CDS
GCACCAGAAGTAGCTGCTTT+GGG 0.354608 7.4:-72512511 MS.gene040439:CDS
TTAAAGAATTTAACATCCTC+TGG 0.355436 7.4:+72512072 None:intergenic
ATGAAATATTAACTCTTCCT+TGG 0.358498 7.4:+72512794 None:intergenic
TCGATTACAGAGAAATAAAA+TGG 0.359523 7.4:-72519999 MS.gene040439:intron
AAAAGATGGTTTGGCCTCTT+GGG 0.360897 7.4:+72511653 None:intergenic
GGAAAGGGAGAAAATGAAAT+AGG 0.361457 7.4:+72512568 None:intergenic
GAGCCCAAAGCAGCTACTTC+TGG 0.367122 7.4:+72512508 None:intergenic
TGCACCAGAAGTAGCTGCTT+TGG 0.374949 7.4:-72512512 MS.gene040439:CDS
GGAGGATCAAAATGCAGTTT+AGG 0.379707 7.4:-72511594 None:intergenic
GTTGTAGGTTGCTGATCTAC+TGG 0.383059 7.4:-72518146 MS.gene040439:intron
GGTTTCGGCAATTTGTTTGC+AGG 0.386760 7.4:-72512767 MS.gene040439:intron
TTTGCAAACCGCGTCCTAGC+TGG 0.390492 7.4:+72513364 None:intergenic
TTGTTCCATCAGCCTCATTT+GGG 0.391052 7.4:+72514370 None:intergenic
CGAATATAAGATTAGAATAT+CGG 0.392691 7.4:-72518605 MS.gene040439:intron
TTCCAGTTGGCTCATACATT+AGG 0.393373 7.4:-72513101 MS.gene040439:CDS
TTCAGATTCACTTCCATGTA+TGG 0.394866 7.4:-72511615 MS.gene040439:CDS
TTGAATTCGCATGAGAAAAT+CGG 0.400083 7.4:+72512661 None:intergenic
GGTTCCAGATCGTCAAAATC+TGG 0.400296 7.4:-72514669 MS.gene040439:CDS
TCTTGCTAAAGCTTTAGAAA+TGG 0.404433 7.4:-72513148 MS.gene040439:CDS
ACCTGATATTCTGATGTTCC+CGG 0.405785 7.4:+72514297 None:intergenic
TACAGATACGTGAACAGAAA+AGG 0.406730 7.4:-72519384 MS.gene040439:intron
AAGAGTTAATATTTCATGTT+GGG 0.407651 7.4:-72512788 MS.gene040439:CDS
ATAAGGGACTCAAGTCTATT+CGG 0.408251 7.4:-72513339 MS.gene040439:CDS
CAACTGGAACACAGTCTTCT+CGG 0.421252 7.4:+72513115 None:intergenic
ATCTTACCTCATGGCTCATA+AGG 0.433597 7.4:-72517615 MS.gene040439:intron
ATACATTAGGCTGCATATCA+TGG 0.436002 7.4:-72513088 MS.gene040439:CDS
GAAGATACAAGATGAACTTA+AGG 0.436203 7.4:-72513648 MS.gene040439:CDS
GCATCTCATCTGAACCCATT+AGG 0.438120 7.4:+72517096 None:intergenic
TATACCAAACGCAGTATTCG+TGG 0.443764 7.4:-72511908 MS.gene040439:CDS
TTTACGTTTCGACACTCGTT+GGG 0.446883 7.4:+72512122 None:intergenic
TCTCTCTTGAGGATTATTGT+AGG 0.451656 7.4:+72512547 None:intergenic
ACTGTTGGTATTCCAAATCC+TGG 0.452598 7.4:+72518637 None:intergenic
TGTCAAGAATGCTGGAGAGC+AGG 0.453277 7.4:-72514636 MS.gene040439:intron
TGAAAACTGTTGATCGAGAT+AGG 0.455302 7.4:-72512483 MS.gene040439:CDS
TCTACTCTCATGCATGGAAA+TGG 0.456856 7.4:-72518264 MS.gene040439:CDS
AGCAGACCACATGCTGTAAC+CGG 0.458582 7.4:+72513015 None:intergenic
GATATAGTTGTCAAGAATGC+TGG 0.465249 7.4:-72514644 MS.gene040439:CDS
TCGGCCACGAATACTGCGTT+TGG 0.468726 7.4:+72511904 None:intergenic
AACTCTTCCTTGGATTTGAT+GGG 0.469335 7.4:+72512804 None:intergenic
GTCTATTCGGAATTCTATAT+GGG 0.472019 7.4:-72513326 MS.gene040439:CDS
TTGAGGATTATTGTAGGAAA+GGG 0.473102 7.4:+72512553 None:intergenic
GAATTCTATATGGGATCCTA+TGG 0.478428 7.4:-72513317 MS.gene040439:intron
CAGCCTCTCTGTGAATCAAA+TGG 0.478691 7.4:-72517279 MS.gene040439:intron
AAAGATAACCAGTGAGAAGA+AGG 0.480248 7.4:+72517309 None:intergenic
AACATACCGTGTGTACCAAC+CGG 0.484373 7.4:+72511872 None:intergenic
CATAACTATACCTGAAATGA+AGG 0.486849 7.4:+72512968 None:intergenic
TCGTGGCCGAATTAAAGAAC+CGG 0.487872 7.4:-72511891 MS.gene040439:CDS
ACAGATACGTGAACAGAAAA+GGG 0.490199 7.4:-72519383 MS.gene040439:intron
TCTTCTAAATCTTCTCTCAA+AGG 0.496466 7.4:-72520169 MS.gene040439:intron
GGTTACAGCATGTGGTCTGC+TGG 0.496699 7.4:-72513013 MS.gene040439:CDS
CTTTGCTCTATGTGCTTCTG+TGG 0.498498 7.4:-72518722 MS.gene040439:CDS
AATGGCTTAAAGTTCCTCAT+TGG 0.499435 7.4:-72517649 MS.gene040439:CDS
CGATGAAGTGGATACGCCAT+TGG 0.501229 7.4:-72513392 MS.gene040439:CDS
GAAGAGTTAATATTTCATGT+TGG 0.502923 7.4:-72512789 MS.gene040439:CDS
TTTACTTGAGTTCAAAAGAA+GGG 0.502985 7.4:+72517127 None:intergenic
AGATCATCCTTTGTATCAGC+TGG 0.504240 7.4:+72517825 None:intergenic
CTTTACGTTTCGACACTCGT+TGG 0.505082 7.4:+72512121 None:intergenic
TTGCAAACCGCGTCCTAGCT+GGG 0.505760 7.4:+72513365 None:intergenic
CTTGAGGATTATTGTAGGAA+AGG 0.506116 7.4:+72512552 None:intergenic
CTGAAGCGCGTTATTCTGAC+GGG 0.506308 7.4:-72512454 MS.gene040439:CDS
CTTCATAATTGCAGTTCTTG+TGG 0.506384 7.4:-72517685 MS.gene040439:intron
CAGGTTCATGTATCAGGTGC+TGG 0.509397 7.4:-72517188 MS.gene040439:CDS
CGTTTGGTATAAATCTCTAC+AGG 0.510956 7.4:+72511920 None:intergenic
ACGCGGTTTGCAAAATATAA+GGG 0.514778 7.4:-72513355 MS.gene040439:CDS
ATGGAGAGGTTTCTCCATGC+TGG 0.517625 7.4:-72512619 MS.gene040439:CDS
CAATGGCGTATCCACTTCAT+CGG 0.518162 7.4:+72513393 None:intergenic
AAGAAAGAGAAAGCTTCCTC+CGG 0.519515 7.4:-72514316 MS.gene040439:CDS
GGATAACATTTACAATCCTC+AGG 0.523806 7.4:+72517846 None:intergenic
TGTAGAGTTTCCCGATGAAG+TGG 0.533637 7.4:-72513404 MS.gene040439:intron
AGCCTAATGTATGAGCCAAC+TGG 0.534711 7.4:+72513099 None:intergenic
AAATGCACCCTTCTTCTCAC+TGG 0.537859 7.4:-72517317 MS.gene040439:CDS
CATCCTCTCCATCTCTCTTG+AGG 0.538235 7.4:+72512536 None:intergenic
ACAGAACGCAACGTTGGTAA+AGG 0.539454 7.4:-72520034 MS.gene040439:CDS
AATGGCGTATCCACTTCATC+GGG 0.540957 7.4:+72513394 None:intergenic
GAACTTCAACTTTACAGAGT+CGG 0.542007 7.4:+72517159 None:intergenic
TGTGGCTCTTTAAAGAGCAA+TGG 0.548868 7.4:-72517667 MS.gene040439:CDS
TAACTTTGAAGCAACACCGC+AGG 0.556209 7.4:+72513059 None:intergenic
AAGTGACAAAGTTTCAATGA+TGG 0.557684 7.4:-72513785 MS.gene040439:intron
GTCCTAGCTGGGACATCCAA+TGG 0.559338 7.4:+72513376 None:intergenic
ACAATAATCCTCAAGAGAGA+TGG 0.559651 7.4:-72512544 MS.gene040439:CDS
GATTCTTCTACAATACTCCC+AGG 0.560159 7.4:-72518655 MS.gene040439:CDS
AAAGATGGTTTGGCCTCTTG+GGG 0.560815 7.4:+72511654 None:intergenic
AGAAGCTCATGCTGCAGATG+AGG 0.562053 7.4:-72513618 MS.gene040439:CDS
GATATTGATGATCGTACTGA+TGG 0.564422 7.4:-72517350 MS.gene040439:CDS
TATGGCATTGAAGATGATGA+TGG 0.567288 7.4:-72513823 MS.gene040439:CDS
GTTCAAGAACTCCGTTGAGA+AGG 0.567385 7.4:+72511717 None:intergenic
ATGTTATCCAGCTGATACAA+AGG 0.568034 7.4:-72517832 MS.gene040439:CDS
TTACCAGACACGCCCAAATG+AGG 0.568389 7.4:-72514382 MS.gene040439:intron
TATTCGGAAGAAGCAACTGT+TGG 0.570763 7.4:+72518622 None:intergenic
AGAAAGAGAAAGCTTCCTCC+GGG 0.574353 7.4:-72514315 MS.gene040439:CDS
TTACTTGAGTTCAAAAGAAG+GGG 0.574385 7.4:+72517128 None:intergenic
TGGATGTCCCAGCTAGGACG+CGG 0.575299 7.4:-72513372 MS.gene040439:CDS
CAAGAGACCTAAATACAGAA+AGG 0.576022 7.4:+72518050 None:intergenic
CATAGCAGAATGGGAATGAG+TGG 0.578376 7.4:-72520232 None:intergenic
AGATGAGATGCACGATGCGA+AGG 0.582163 7.4:-72517084 MS.gene040439:intron
CCTGAAGCGCGTTATTCTGA+CGG 0.584069 7.4:-72512455 MS.gene040439:CDS
CGCCATTGGATGTCCCAGCT+AGG 0.584453 7.4:-72513378 MS.gene040439:CDS
TGGTGATCTACTCTCATGCA+TGG 0.586716 7.4:-72518270 MS.gene040439:CDS
ACACGCCCAAATGAGGCTGA+TGG 0.587587 7.4:-72514375 MS.gene040439:CDS
GAAGCTCATGCTGCAGATGA+GGG 0.590665 7.4:-72513617 MS.gene040439:intron
AACTTTGAAGCAACACCGCA+GGG 0.597089 7.4:+72513060 None:intergenic
CTGTTGGTATTCCAAATCCT+GGG 0.598130 7.4:+72518638 None:intergenic
ATGGGATGAATTCGATGAAG+AGG 0.601876 7.4:-72513854 MS.gene040439:CDS
CTCATGCATGGAAATGGTCA+AGG 0.602514 7.4:-72518258 MS.gene040439:intron
ACACTACCGGTTACAGCATG+TGG 0.608337 7.4:-72513021 MS.gene040439:CDS
AAATGAGGCTGATGGAACAA+AGG 0.610431 7.4:-72514367 MS.gene040439:CDS
AACTCAACGATCTTACCTCA+TGG 0.611394 7.4:-72517624 MS.gene040439:CDS
AAACGCAGACAAGAACAAGA+TGG 0.613118 7.4:-72512638 MS.gene040439:CDS
CGAGAAGACTGTGTTCCAGT+TGG 0.614137 7.4:-72513114 MS.gene040439:CDS
CGAACGAAGAGAACAGTGCT+TGG 0.617692 7.4:+72518022 None:intergenic
TCACGCGCCCATCAAATCCA+AGG 0.618307 7.4:-72512811 MS.gene040439:CDS
GAAGAGAAACGAGACTTGTG+AGG 0.623454 7.4:+72520187 None:intergenic
AGATTCACTTCCATGTATGG+AGG 0.623829 7.4:-72511612 MS.gene040439:CDS
ACAATCCTCAGGAAATTCTG+AGG 0.624314 7.4:+72517857 None:intergenic
TATACTTGCAAAGACACTAC+CGG 0.630488 7.4:-72513034 MS.gene040439:CDS
AATCCTCAAGAGAGATGGAG+AGG 0.632229 7.4:-72512539 MS.gene040439:CDS
TCTTGCCTCAGAATTTCCTG+AGG 0.643770 7.4:-72517862 MS.gene040439:CDS
ATAGCAGAATGGGAATGAGT+GGG 0.646682 7.4:-72520231 None:intergenic
CAGGTACTAAAAGCACCTCA+TGG 0.646730 7.4:-72518290 MS.gene040439:CDS
AAAGAACCGGTTGGTACACA+CGG 0.647276 7.4:-72511878 MS.gene040439:intron
TTCACATGAAGACTTTGCCG+AGG 0.648716 7.4:+72518114 None:intergenic
GATCGTTGAGTTCTCCAATG+AGG 0.650248 7.4:+72517635 None:intergenic
GCAATGAAGTGCCTTCTCAA+CGG 0.651139 7.4:-72511728 MS.gene040439:CDS
TTACCATTTGATTCACAGAG+AGG 0.651783 7.4:+72517276 None:intergenic
AGATGATGATGGAGATTCTG+AGG 0.652330 7.4:-72513812 MS.gene040439:CDS
AAGATAACCAGTGAGAAGAA+GGG 0.654585 7.4:+72517310 None:intergenic
ACAAACGAGCATTCCCCAAG+AGG 0.656824 7.4:-72511667 MS.gene040439:CDS
CTACTGAAAAGCGTCCAGCA+TGG 0.660758 7.4:+72512605 None:intergenic
GGCCGAATTAAAGAACCGGT+TGG 0.664191 7.4:-72511887 MS.gene040439:CDS
TTACTCACAATTACACGAGG+AGG 0.673161 7.4:+72519316 None:intergenic
TACAAAGGATGATCTGCACA+AGG 0.676894 7.4:-72517817 MS.gene040439:intron
GTGAAAACAGAACGCAACGT+TGG 0.678738 7.4:-72520040 MS.gene040439:CDS
CAGACAAGAACAAGATGGAG+AGG 0.687695 7.4:-72512633 MS.gene040439:CDS
TATTTACTCACAATTACACG+AGG 0.705049 7.4:+72519313 None:intergenic
CATATCATGGACGTACCCTG+CGG 0.712045 7.4:-72513075 MS.gene040439:CDS
TCCAAACCTTATGAGCCATG+AGG 0.713107 7.4:+72517609 None:intergenic
TGATATTCTGATGTTCCCGG+AGG 0.735991 7.4:+72514300 None:intergenic
TGAAGCGCGTTATTCTGACG+GGG 0.739162 7.4:-72512453 MS.gene040439:intron
AAACAGAATAGAGAACTCAG+TGG 0.757960 7.4:-72519349 MS.gene040439:CDS
CATGAGAGTAGATCACCATG+AGG 0.766830 7.4:+72518275 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr7.4 gene 72511595 72520245 72511595 ID=MS.gene040439
chr7.4 mRNA 72511595 72520245 72511595 ID=MS.gene040439.t1;Parent=MS.gene040439
chr7.4 exon 72520170 72520245 72520170 ID=MS.gene040439.t1.exon1;Parent=MS.gene040439.t1
chr7.4 CDS 72520170 72520245 72520170 ID=cds.MS.gene040439.t1;Parent=MS.gene040439.t1
chr7.4 exon 72520000 72520079 72520000 ID=MS.gene040439.t1.exon2;Parent=MS.gene040439.t1
chr7.4 CDS 72520000 72520079 72520000 ID=cds.MS.gene040439.t1;Parent=MS.gene040439.t1
chr7.4 exon 72519324 72519401 72519324 ID=MS.gene040439.t1.exon3;Parent=MS.gene040439.t1
chr7.4 CDS 72519324 72519401 72519324 ID=cds.MS.gene040439.t1;Parent=MS.gene040439.t1
chr7.4 exon 72518606 72518749 72518606 ID=MS.gene040439.t1.exon4;Parent=MS.gene040439.t1
chr7.4 CDS 72518606 72518749 72518606 ID=cds.MS.gene040439.t1;Parent=MS.gene040439.t1
chr7.4 exon 72518259 72518309 72518259 ID=MS.gene040439.t1.exon5;Parent=MS.gene040439.t1
chr7.4 CDS 72518259 72518309 72518259 ID=cds.MS.gene040439.t1;Parent=MS.gene040439.t1
chr7.4 exon 72518021 72518161 72518021 ID=MS.gene040439.t1.exon6;Parent=MS.gene040439.t1
chr7.4 CDS 72518021 72518161 72518021 ID=cds.MS.gene040439.t1;Parent=MS.gene040439.t1
chr7.4 exon 72517818 72517940 72517818 ID=MS.gene040439.t1.exon7;Parent=MS.gene040439.t1
chr7.4 CDS 72517818 72517940 72517818 ID=cds.MS.gene040439.t1;Parent=MS.gene040439.t1
chr7.4 exon 72517616 72517693 72517616 ID=MS.gene040439.t1.exon8;Parent=MS.gene040439.t1
chr7.4 CDS 72517616 72517693 72517616 ID=cds.MS.gene040439.t1;Parent=MS.gene040439.t1
chr7.4 exon 72517280 72517375 72517280 ID=MS.gene040439.t1.exon9;Parent=MS.gene040439.t1
chr7.4 CDS 72517280 72517375 72517280 ID=cds.MS.gene040439.t1;Parent=MS.gene040439.t1
chr7.4 exon 72517085 72517207 72517085 ID=MS.gene040439.t1.exon10;Parent=MS.gene040439.t1
chr7.4 CDS 72517085 72517207 72517085 ID=cds.MS.gene040439.t1;Parent=MS.gene040439.t1
chr7.4 exon 72514637 72514705 72514637 ID=MS.gene040439.t1.exon11;Parent=MS.gene040439.t1
chr7.4 CDS 72514637 72514705 72514637 ID=cds.MS.gene040439.t1;Parent=MS.gene040439.t1
chr7.4 exon 72514299 72514397 72514299 ID=MS.gene040439.t1.exon12;Parent=MS.gene040439.t1
chr7.4 CDS 72514299 72514397 72514299 ID=cds.MS.gene040439.t1;Parent=MS.gene040439.t1
chr7.4 exon 72513786 72513881 72513786 ID=MS.gene040439.t1.exon13;Parent=MS.gene040439.t1
chr7.4 CDS 72513786 72513881 72513786 ID=cds.MS.gene040439.t1;Parent=MS.gene040439.t1
chr7.4 exon 72513618 72513693 72513618 ID=MS.gene040439.t1.exon14;Parent=MS.gene040439.t1
chr7.4 CDS 72513618 72513693 72513618 ID=cds.MS.gene040439.t1;Parent=MS.gene040439.t1
chr7.4 exon 72513318 72513421 72513318 ID=MS.gene040439.t1.exon15;Parent=MS.gene040439.t1
chr7.4 CDS 72513318 72513421 72513318 ID=cds.MS.gene040439.t1;Parent=MS.gene040439.t1
chr7.4 exon 72512979 72513238 72512979 ID=MS.gene040439.t1.exon16;Parent=MS.gene040439.t1
chr7.4 CDS 72512979 72513238 72512979 ID=cds.MS.gene040439.t1;Parent=MS.gene040439.t1
chr7.4 exon 72512768 72512854 72512768 ID=MS.gene040439.t1.exon17;Parent=MS.gene040439.t1
chr7.4 CDS 72512768 72512854 72512768 ID=cds.MS.gene040439.t1;Parent=MS.gene040439.t1
chr7.4 exon 72512454 72512684 72512454 ID=MS.gene040439.t1.exon18;Parent=MS.gene040439.t1
chr7.4 CDS 72512454 72512684 72512454 ID=cds.MS.gene040439.t1;Parent=MS.gene040439.t1
chr7.4 exon 72512071 72512149 72512071 ID=MS.gene040439.t1.exon19;Parent=MS.gene040439.t1
chr7.4 CDS 72512071 72512149 72512071 ID=cds.MS.gene040439.t1;Parent=MS.gene040439.t1
chr7.4 exon 72511879 72511942 72511879 ID=MS.gene040439.t1.exon20;Parent=MS.gene040439.t1
chr7.4 CDS 72511879 72511942 72511879 ID=cds.MS.gene040439.t1;Parent=MS.gene040439.t1
chr7.4 exon 72511595 72511752 72511595 ID=MS.gene040439.t1.exon21;Parent=MS.gene040439.t1
chr7.4 CDS 72511595 72511752 72511595 ID=cds.MS.gene040439.t1;Parent=MS.gene040439.t1
Gene Sequence

>MS.gene040439

ATGGGAATGAGTGGGACACGAGTGCAATTGAATAAACCTCACAAGTCTCGTTTCTCTTCTAAATCTTCTCTCAAAGGTTTGTCACGTCATGATTTTGATCATCACGTATAATCTTCATGTATTGCTTTGATTAACGGTTTGTTTGCTTTTTTATTGTGTTGTTTAGATAGAATAATTCCAGTTGTGAAAACAGAACGCAACGTTGGTAAAGGAGCACGTGCTGCTCGATTACAGAGAAATAAAATGGTACCTATTATATGTTCTTGTTTGTGCTTTACTCTATACTTACTTGGAGCACCGACACTTCTGATCAAAGGTGTGTTTTTTGTCCGACACAGACACATATAATTACATTCAATTATTCAAAATAGTACCGGTGTCGAAGTGCAGTGTTGGGCTGCTTCATAGGTGCTTTATCGTTGTATTTAGAAAGAAATAAAAAAAAAAAAAAACACAATTTAGTACCAAGTATATGAAAACCATCAAAAAATTTGTCGAGCCTTGCGGCAAAACTCACATGCCAAGTGTTTGAGAAGTGGAAAATTGTGGGCTCGAATCTGCGGCCAACTTTTCAAATGTCCCTGCAGTATTCTGAGTAGGATACTGAAAATCGTCAATTTAGTCCTTGTAGTTATGAAAATTTGTAATGTCAGTCCCTAACATCTAAATGACGGAGAAAAAATTGATGATTTTTATAACTTTAGGAACTAATTATTATATTTGTATACTTCAGAGACTAAATTAGATAGAGAGTGATACATCAAAGATTAATTGATGGTTTATTTATTCTTGTAGTTACTATTTCCAGAGTTGTCTCTGATCGATCTGTGAATTTACAATACAGATACGTGAACAGAAAAGGGCTGCAGTATTGAAACAGAATAGAGAACTCAGTGGCTCAACAACTCCTCCTCGTGTAATTGTGAGTAAATATTAATTCCGGCTGTCTTTTGTTAAATTGAATTTCACACTTATTTTCAGTATGATACCGTGTGTCACACATGTCACTCGTTGGTTTTTACGATTTTTCACATAATACTAACTGTGCAGCATAGGTATTAAATATTCACAAGTACTTCAATTCTTTTTACATAATTGCCTATTTTCAAACATGGTTAAATCTTATTTGTGTCAAATAAATGAATATCCTTTCCAATATACATTCAAATGAAAGTATTTCCTGCAAAATTAGAGGTCAAGTTATTAAGTACAAAAGTCGACATTGTTGACATTTTAGGGTGTGTTTGGGAAGAGGGTTTAGGAGGGGAAGGGAGGGGAGGGCTCACTTTTATTTTTTAAATTACGAACAATGTAAAATGTCTTTTTAAGATAAATTAAGTGTTTTTGAAGTATTATATGATCATTTATCATGTTGTTAATTCAATTTTTTAAAAATCATTTTATAATATCTTTAAATTAAAAAAGGAATGTAAGCCCTCCCCTCCCTTCCCCTCCTAAACCCTCTTCCCAAACACACCCTTAATGTGCCGTCACAGGTTCTCTTTGCTCTATGTGCTTCTGTGGATTTAGAATCACTTGCAAATGAGCTCTCATCATTATTATCTAAAGATTCTTCTACAATACTCCCAGGATTTGGAATACCAACAGTTGCTTCTTCCGAATATAAGATTAGAATATCGGTACATTCATCTGATTGATTGCTGCCTTATTATTATCTGATAATTAGAAAATTTATTGTACATGAATTGAGTTGTTGATAGCTAAAATAGACTTTCGAATTTAATATTTAATGATATGAAGTCATGAATTTAATAATTTATTATTCATTCTCATATATCAGAATATTGACCTGCATTTGGGAAACTAGGACGACAATTGTAATTTAAACATGTTTTCGAATATATAATGATCCTTTTCCCAAGCAAGTTGTGATGGATGGGATTTGACATGAACTTTGTATGCTACATGGCTACAGGTACTAAAAGCACCTCATGGTGATCTACTCTCATGCATGGAAATGGTCAAGGTATCAATTTTTACATTTGCGTTGCCTCCATGACTTCTGTTTATGGCTGTGGAATGGGTTTTGATTACTGCTGTGTTGGACACTGTTTATGTTGTAGGTTGCTGATCTACTGGTTTTTGTGGCCTCGGCAAAGTCTTCATGTGAAGAAACTGCTTCTCAGTACATTGATTCGTTTGGAAATCAATGCCTTTCTGTATTTAGGTCTCTTGGTTTACCAAGCACTGTTCTCTTCGTTCGTGTAAGTTAGGATGAATCATATTTTTGGAAGCTATGAATTGAGTTACACGGACATATAGTCATTTCATTTTATGCTTTTAGGATCTTCCCACTGAGCTAAAACAAAGAAATGAACTAAAGAAGTCGTGCTCATCAAGTCTTGCCTCAGAATTTCCTGAGGATTGTAAATGTTATCCAGCTGATACAAAGGATGATCTGCACAAGGTAATTATTTCAACACTTGTTGGCTGAAAAATTTATTTGTAACCGTTAAGCTTATCATCTATTGTATATCCAGTTTGATAGTTTAACGTTAAGCCTTTCACTCCTTCCGTCTTCATAATTGCAGTTCTTGTGGCTCTTTAAAGAGCAATGGCTTAAAGTTCCTCATTGGAGAACTCAACGATCTTACCTCATGGCTCATAAGGTTTGGATTCAACAGCCTAGTCATATTGGTTTCAATCATGTTTTCTAAGATAATTTATTAGTATATGTAGTTTTGTAGCACTAAACAATCCACAATATCATAACTTTTTTAACATGGGTGAATAAATGATTTCTGACCATATTATATTCACCTTTTCTGTAAAGCCCTTATGCAATTTGATGAAGATGTTGATTGATGCTATTGCATTGAGCTTATCATGTTTTCAACCGTAAATTTCAGGTCGATATTGATGATCGTACTGATGGTAATTCTGACAAATGCACCCTTCTTCTCACTGGTTATCTTTGTGCTCACAGCCTCTCTGTGAATCAAATGGTAATGAGCAAGATCATATAATAGGTTACAGTTTCATTAAATTGTTGGTAGTCTCACATTTTGTTTGTTCAGGTTCATGTATCAGGTGCTGGAGATTTCCGACTCTGTAAAGTTGAAGTTCTCGAAGATCCCCTTCTTTTGAACTCAAGTAAAAATCAAGACCTAATGGGTTCAGATGAGATGCACGATGCGAAGGTATAGAGTTTTACAGAATTTTTTTAGCCATTAAGGGTTTCTACATATATTATTTAATTATATGACAGTAAGGTTAAAACATATAATATGCATATTTATAGGGTCGGCTATGAGCCTGTGCAAAGAGGCTTGTAGCACGCAACCTCGAAGTTGTGAGGACCCCAAATTCTCAAAAAATCATGAGTTTAAACGACCTTGCAACGAAGCTGTGTTTTCTATCAGTTTTGAGGGGCCCAAATTCATAACTGTATTGGGAAATGTTCAATGCTTATAAGAAGGTTTTTAATTCTGTCAACTTATTCATAGACATCTTCCCTGTCTTTTGCTTGCCAAACTATCTGACGTGGGACTTACATCTTTGTTTAGTATGATGTTCAATGCAAACTTGTGTAGCAACTGGTGAACAAGATTCCCCATTTGTGCCTTGAACTTCTAGAGTTGGCCTTGGGACTTTCACTTTCATATTCCGAGTTTGATGACCAACTACTAGGGGAACAGTTACGTTAGCTGCCTGATTCATTTGATTCTCTAGTGTTGACTTACAAACAAAATCCTCCACACCAACAACACAAGAATCCTTCATAAGAAAACCCACTTGAGGATCTTGAAGCTTGGATAACTTCATGAAAGATCCAGAACCAAAGGCCATTGAACTTGCATTGAACTCATGATTTAAGTTCTTTTGTAATTGTCATGTTGGTATTGAGTTGATTGAATAAAAGCAACATAAGTTCCACATCCCTTTGACAAATTAGCAGTTTTCATAGCCTCCAAATAAATTGATAAGAAGTTGTCTCCTTTGTGCCCTGTTGATACAGAAGAAAACTCCATGCACAGCCGCCAACGACTAAAGACTCAGAGTAAATCTTCTCAACATTCAACCGAGAGAAATTCTCAATCTTCCATGTGAATTTCTCAAAAATCTCAACACTTGTTTATTGATGCTCTACTTCTACAAACTCAATAAGATTGACGTAGCCAGCTCCTAAGAACGGCCAGACTTTGAAAGAGAAAGAAGTCACACTTACTGAGTTTGTAGAAATGGAACATCAAGAAACAATTGTTGAAATAGTTGAGAAATTCACATGGAAGATTGAAAACTTCTCTCGCTTGAATGTTGAGAAGATTTACTCTGAGCCTTTCGTTGTTGGTGGCTATCCATGGAACTTCTGTATCCACACAGGGCACAAAGGAGACACCATCTTATCAATTTATTTGGTGACTATGTGAACTGCCAATATGTCAAAGGGATGAAGTAGAGATGTGAAACTAAGTTTTTTTTATTCAATCAATTCAATACCAACATTACAATTTCGAAAGAACTTAACCATGATTTCAATGCACGTTCGATAGCTCAGGGCTTCAGGGCTCCAGATCTTTCATGAAGTTATCTAAGCTTCAAGATCCGCAAATGTGTTTTCTTGCGAAAGATGCTTGTATTGTTGGTACGGAGAATTTTCATTTTAAGTCAACACTTGAGAATCAAGTGGATCAAACAACTAACGTAACTGTTTCCCTATGAGGTGGAAGTCAAACTGGGCATATGAAAGTAGAAAGTCCAATGCCAAATCCAGAAGTTCAAGGCCAAAATGTGGAAACTCATTCACCAATTTCTACACAAGTTTGTAACTCCGTCATCAGACAGTTTGGCAATAAGTTGTGTAGAATGGACTTCAGAGTGTGCAAACAGAGATTAATGCACTTACAGTCCCAGTATTCAGAACCTTGTTATAAGTGTTGAACACTTCACAATACAGTTATTAATTTTTTTGTTTTTATAATAGTTTCTATCTCTGATTTGTGTTTTGAATTAGAAAATCTGATGTAAAACCTCATTTAAACTCGTCACTTTTTTAGAATTTTGGGCCCTCAAAATTTTGAGGCCCTGTGATATGGGTCTGTTTGTACAAGCACATAGCCGCCACCTGCCTAATACTATCAAGGACCGAAATTCATCTGCTGTAGAACACAATATCTCAGGAGTGTTAGGTGGGTTATTCCATAGCCTTTAAGAAAAAAGTAACACAAGTAGGAGACTCTTTTTATATACGTAAGGCCGTCTTTAACATTTTGGAGGTCCTGCTGCTCTAATCTAAAAGACGGCCTTGCATATTTAAGCATGTAAATAAAATCATGGAATCTGAATATTGATATAACACTTTTAATTGGTGAGGTCATTTTTTAGTCTATTAGAAAACACTGTCACCCTTCCCCCTTTTAAGTTTGATATAATGAAATTTTAAGTCTACTGTGCATGCAACATTTGGACATTGTGAACTTGCAAAATTTTTACCTTTTTAATCTCATACGTTCTTTAACTATTTGTCTATATCTACACTTTAATTTTTCCCTCTACTTTCCTGCTTTATAATGTTTTAGGTCATTCATTCTCTGGTTCCAGATCGTCAAAATCTGGAAGATATAGTTGTCAAGAATGCTGGAGAGCAGGTAGATAAGGAGATCCTATTTCTAATTCTGCCATTACTATTTGTTAATCGTAAGATTTGATTTTTGAGATTTTCTACTACTAATTTCTGAATTGACATCTTTTAATTGAATACAAGAGTACTCCTTAATTTTACTTTTTGCACTACGACAAAATGATAGGATGAGCCGTTACTGCCTATCAAATTAGTTGCAAGATTTTTTTCCTTAGCATTTTGAGTGATATCATTCCCTATTACCAGACACGCCCAAATGAGGCTGATGGAACAAAGGCTGATGAAGATCATGAGCAAAAGAAAACAAGAAAGAGAAAGCTTCCTCCGGGAACATCAGAATATCAGGTTTGAGCTTGTTTTCATGATACAGTTATTTCTGAAAGATTTTTGTTACCCTTATTATTTTGATTATTTTTCCTGATGTTTTCTGTCATATTTATGCTTACCAAGTAGGTATTACCTACGTCTCATATTATATGTCTTTTTAAGATAATGCACATGTCCTAAGAAAATGATTAGTTATTTTGAATTCAATAGTAAAATAGTGTGTATAGTGTATATAGTCTAAACTACACATATTAGTTAGAGGTTGAAAGTAGCAGTAGTAGTTGTAGTGGTGAAATAGTTCGGTGGACTATTTAATTAAATGACAAATAACATGATACAAAAATGTTTCAAATGAAACATTTATAATGAGACATAGCCACGGAGGTAGTATCTAATATGGAAAAATAAATTTTTGGCCTTTATTTTGATTTTTAGGCTGCATGGGATGAATTCGATGAAGAGGAGTCAGATTATGGCATTGAAGATGATGATGGAGATTCTGAGGAAGAAAGTGACAAAGTTTCAATGATGGTGAGTTTGTAAAAACTTAATACTGAAGTGTTTTGGCATCATTGGATAGTCTCCGGTCATTAATGCATGATTACTTTTTTGTTGGATTTCAGGAAGTAGATGACATGACTGAAGAGAAGATACAAGATGAACTTAAGGCAATTAAAGAAGCTCATGCTGCAGATGAGGGTAATTTTTATTATTTTATGTTCTTATGTTTGTCTGTGTCACATTTGCTTTTTATTAGAAAAAACCATAAAGTTGAAGAGTTTTGCGTAGGTGACATGGAATGTACCTGTCTGTGGATGATTTGCAATTGTATCGCATTGATGATATAATGATTTTAAATAATGATTTGTTGCTTGATATATGTTTTTTGTTGTAGAGTTTCCCGATGAAGTGGATACGCCATTGGATGTCCCAGCTAGGACGCGGTTTGCAAAATATAAGGGACTCAAGTCTATTCGGAATTCTATATGGGATCCTATGGTATTTTATCACTTCGTTATTCTTTAATTAGTCGTTTCTATTAACAGCAAAAAATTCTGACATTTCTAATTTTTATCAGGAATCTCTACCTCAAGATTATCCCAAAAATTACAATTATCATAGTTTCAAAAGAACACAAAAACAGGTTCTTGCTAAAGCTTTAGAAATGGAACGAGAAAACCGAGAAGACTGTGTTCCAGTTGGCTCATACATTAGGCTGCATATCATGGACGTACCCTGCGGTGTTGCTTCAAAGTTATGTATACTTGCAAAGACACTACCGGTTACAGCATGTGGTCTGCTGGAACACGAAAACGAAGAATCTGTCCTTCATTTCAGGTATAGTTATGCTTTATCATTTTACTATTTCATTTTTAGTGCTTTTCATACTGTACTAATTAAAAAGTGATCCTCTGAATATTCAAAAGACGTGTCATGAAATAAAGTCGCTCATGTTTTGTAGTGTGAAGAAGCACGAAACGTATCACGCGCCCATCAAATCCAAGGAAGAGTTAATATTTCATGTTGGGTTTCGGCAATTTGTTTGCAGGTATGGTATTCAATTTAAACAACCATGACATAATAAAACTCGTTAGGAAAAAAAAGTATAAGAAATGGTGACAAATTTTGCAGGCCGATTTTCTCATGCGAATTCAAAAACGCAGACAAGAACAAGATGGAGAGGTTTCTCCATGCTGGACGCTTTTCAGTAGCTTCAGTTTATGCACCTATTTCATTTTCTCCCTTTCCTACAATAATCCTCAAGAGAGATGGAGAGGATGCTGCACCAGAAGTAGCTGCTTTGGGCTCACTGAAAACTGTTGATCGAGATAGGATAATCCTGAAGCGCGTTATTCTGACGGGGTATGTTTGTTGATGTTTGCCATAACCTATCAATTAAAAGCTGTTAGATATGAAAATATCTCATCATATATCAAAATTGTTTTATAATGTCTTAGGTTATCTATTTGCATTAGTTTCTATATTTCAATATTTCTACATTGTTATCGCCTATTACTTCAACAAAAATCCTTGCATGTTATTTTTTTGTCGACTCCTTTTCAATACTGATTCCGGCAACTTTGTAGTTATTGTCATTTAAGAGTTGGGACAATCCCCAATAAATTTGTTTTACTAATTAGAAGCTTTTAAACATTTTGTGGTGCAGTTACGCCCAACGAGTGTCGAAACGTAAAGCTTCTGTGAAACACATGTTTTATAATCCAGAGGATGTTAAATTCTTTAAGGTAAGAAAAAATGGTACCCAGTTTCTGAAATCATTACTTTCTTTCCATGATGAATTGGATAGAATTGACATTAATTTGTTCTCAGTTTTCACACTAACGAGATTTCTTAATGTGGGTGGTAATTGCAGCCTGTAGAGATTTATACCAAACGCAGTATTCGTGGCCGAATTAAAGAACCGGTTGGTACACACGGTATGTTATGTTAGAAATCTTTACCTTGTATCTTTCAAGGTGTCATTTATTTATATTTCAGATTATATAGCATTCATATAAATCTATTATATCCTGATGGTATTATTCTGTTTATTGTTTGTTCAGGAGCAATGAAGTGCCTTCTCAACGGAGTTCTTGAACAGAGTGATACTGTCTGCATGAATTTATACAAACGAGCATTCCCCAAGAGGCCAAACCATCTTTTTCCTTTAAGCTCTGCTTCAGATTCACTTCCATGTATGGAGGATCAAAATGCAGTTTAG
Protein sequence

>MS.gene040439.t1

MGMSGTRVQLNKPHKSRFSSKSSLKDRIIPVVKTERNVGKGARAARLQRNKMIREQKRAAVLKQNRELSGSTTPPRVIVLFALCASVDLESLANELSSLLSKDSSTILPGFGIPTVASSEYKIRISVLKAPHGDLLSCMEMVKVADLLVFVASAKSSCEETASQYIDSFGNQCLSVFRSLGLPSTVLFVRDLPTELKQRNELKKSCSSSLASEFPEDCKCYPADTKDDLHKFLWLFKEQWLKVPHWRTQRSYLMAHKVDIDDRTDGNSDKCTLLLTGYLCAHSLSVNQMVHVSGAGDFRLCKVEVLEDPLLLNSSKNQDLMGSDEMHDAKVIHSLVPDRQNLEDIVVKNAGEQTRPNEADGTKADEDHEQKKTRKRKLPPGTSEYQAAWDEFDEEESDYGIEDDDGDSEEESDKVSMMEVDDMTEEKIQDELKAIKEAHAADEEFPDEVDTPLDVPARTRFAKYKGLKSIRNSIWDPMESLPQDYPKNYNYHSFKRTQKQVLAKALEMERENREDCVPVGSYIRLHIMDVPCGVASKLCILAKTLPVTACGLLEHENEESVLHFSVKKHETYHAPIKSKEELIFHVGFRQFVCRPIFSCEFKNADKNKMERFLHAGRFSVASVYAPISFSPFPTIILKRDGEDAAPEVAALGSLKTVDRDRIILKRVILTGYAQRVSKRKASVKHMFYNPEDVKFFKPVEIYTKRSIRGRIKEPVGTHGAMKCLLNGVLEQSDTVCMNLYKRAFPKRPNHLFPLSSASDSLPCMEDQNAV