AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene53798


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene53798.t1 MTR_7g029115 91.655 719 43 1 52 770 1 702 0.0 1311
MS.gene53798.t1 MTR_3g115250 70.891 797 180 8 3 754 1 790 0.0 1088
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene53798.t1 AT1G42440 57.769 798 282 10 3 753 1 790 0.0 912

Find 156 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCAATGCCTTTCTGTATTT+AGG 0.205408 7.1:-68000482 MS.gene53798:CDS
AGAGGATGTTAAATTCTTTA+AGG 0.213886 7.1:-67994351 MS.gene53798:intron
AAGTATCTGTCCTTCATTTC+AGG 0.222070 7.1:-67995259 MS.gene53798:intron
GAATCTGAAGCAGAGCTTAA+AGG 0.271947 7.1:+67993911 None:intergenic
TTTGTTCAGGTTCATGTATC+AGG 0.277316 7.1:-67999573 MS.gene53798:intron
TCCGGGGACTTCAGAATATC+AGG 0.288711 7.1:-67996631 MS.gene53798:intron
TCTACAGTACTCCCAGGATT+TGG 0.296755 7.1:-68001074 MS.gene53798:CDS
GACACGGTTCGCAAAATATA+AGG 0.298723 7.1:-67995638 MS.gene53798:CDS
TAACTCTTCCTTGGATTTGA+TGG 0.304439 7.1:+67995084 None:intergenic
CTTTCTGTATTTAGGTCTCT+TGG 0.308891 7.1:-68000474 MS.gene53798:CDS
CGATATTCTAATCTTATATT+CGG 0.320602 7.1:+68001031 None:intergenic
CCGTCAGAATAACGCGCTTC+AGG 0.325079 7.1:+67994736 None:intergenic
AGTCTATTCGGAATTCTATA+TGG 0.326490 7.1:-67995609 MS.gene53798:CDS
TACCAACCGGTTCTTTAATT+CGG 0.327324 7.1:+67994166 None:intergenic
TTTGTACCATCAACCTCATT+TGG 0.334257 7.1:+67996702 None:intergenic
TAATATTTCATGTTGGGTTT+CGG 0.340526 7.1:-67995063 MS.gene53798:CDS
TCTCAGTACATTGATTCGTT+TGG 0.345900 7.1:-68000507 MS.gene53798:CDS
GCACCAGAAGTAGCTGCTTT+GGG 0.354608 7.1:-67994792 MS.gene53798:CDS
TTAAAGAATTTAACATCCTC+TGG 0.355436 7.1:+67994353 None:intergenic
ATGAAATATTAACTCTTCCT+TGG 0.358498 7.1:+67995075 None:intergenic
GTTTCAGGTCATTCGTTCTC+TGG 0.359229 7.1:-67997013 MS.gene53798:intron
TCGATTACAGAGAAATAAAA+TGG 0.359523 7.1:-68002156 MS.gene53798:intron
AAAAGATGGTTTGGCCTCTT+GGG 0.360897 7.1:+67993935 None:intergenic
GGAAAGGGAGAAAATGAAAT+AGG 0.361457 7.1:+67994849 None:intergenic
GAGCCCAAAGCAGCTACTTC+TGG 0.367122 7.1:+67994789 None:intergenic
TGCACCAGAAGTAGCTGCTT+TGG 0.374949 7.1:-67994793 MS.gene53798:CDS
GGAGGATCAAAATGCAGTTT+AGG 0.379707 7.1:-67993876 None:intergenic
GTTGTAGGTTGCTGATCTAC+TGG 0.383059 7.1:-68000571 MS.gene53798:intron
GGTTTCGGCAATTTGTTTGC+AGG 0.386760 7.1:-67995048 MS.gene53798:intron
TTCCAGTTGGCTCATACATT+AGG 0.389048 7.1:-67995382 MS.gene53798:CDS
TTGTACCATCAACCTCATTT+GGG 0.389451 7.1:+67996703 None:intergenic
CGAATATAAGATTAGAATAT+CGG 0.392691 7.1:-68001030 MS.gene53798:intron
TTCAGATTCACTTCCATGTA+TGG 0.394866 7.1:-67993897 MS.gene53798:CDS
TTGAATTCGCATGAGAAAAT+CGG 0.400083 7.1:+67994942 None:intergenic
TCTTGCTAAAGCTTTAGAAA+TGG 0.404433 7.1:-67995429 MS.gene53798:CDS
TACAGATACGTGAACAGAAA+AGG 0.406730 7.1:-68001563 MS.gene53798:intron
AAGAGTTAATATTTCATGTT+GGG 0.407651 7.1:-67995069 MS.gene53798:CDS
ATAAGGGACTCAAGTCTATT+CGG 0.408251 7.1:-67995621 MS.gene53798:CDS
TTTGCGAACCGTGTCCTAGC+TGG 0.418030 7.1:+67995646 None:intergenic
ATACATTAGGCTGCATATCA+TGG 0.427320 7.1:-67995369 MS.gene53798:CDS
ATCTTACCTCATGGCTCATA+AGG 0.433597 7.1:-67999998 MS.gene53798:intron
GCATCTCATCTGAACCCATT+AGG 0.442312 7.1:+67999475 None:intergenic
TATACCAAACGCAGTATTCG+TGG 0.443764 7.1:-67994189 MS.gene53798:CDS
TTTACGTTTCGACACTCGTT+GGG 0.446883 7.1:+67994403 None:intergenic
GCTCTCTTGAGGATTATTGT+AGG 0.451656 7.1:+67994828 None:intergenic
ACTGTTGGTATTCCAAATCC+TGG 0.452598 7.1:+68001062 None:intergenic
GGTTCCAGATCGTCAAAATC+AGG 0.454731 7.1:-67996992 MS.gene53798:CDS
TGAAAACTGTTGATCGAGAT+AGG 0.455302 7.1:-67994764 MS.gene53798:CDS
TCTACTCTCATGCATGGAAA+TGG 0.456856 7.1:-68000689 MS.gene53798:CDS
CATAATTATACCTGAAATGA+AGG 0.458519 7.1:+67995249 None:intergenic
AGCAGACCACATGCTGTAAC+CGG 0.458582 7.1:+67995296 None:intergenic
AAGTGACAATGTTTCAATGA+TGG 0.459340 7.1:-67996096 MS.gene53798:intron
AATGGTGTATCCACTTCATC+AGG 0.460465 7.1:+67995676 None:intergenic
AACTCTTCCTTGGATTTGAT+GGG 0.460689 7.1:+67995085 None:intergenic
TGACAAGAATGCAGGACAGC+AGG 0.462004 7.1:-67996959 MS.gene53798:intron
ACAGAACGCAACGTCGGTAA+AGG 0.468268 7.1:-68002191 MS.gene53798:CDS
TCGGCCACGAATACTGCGTT+TGG 0.468726 7.1:+67994185 None:intergenic
TTGAGGATTATTGTAGGAAA+GGG 0.473102 7.1:+67994834 None:intergenic
TGGATAACATTTACAATCCT+CGG 0.476134 7.1:+68000230 None:intergenic
GATATTGATGATCATATTGA+TGG 0.479925 7.1:-67999729 MS.gene53798:CDS
TAGCCTCTCTGTGAATCAAA+TGG 0.480630 7.1:-67999658 MS.gene53798:intron
AACGGCTTAAAGTTCCTCAT+TGG 0.483127 7.1:-68000032 MS.gene53798:CDS
AACATACCGTGTGTACCAAC+CGG 0.484373 7.1:+67994153 None:intergenic
TCGTGGCCGAATTAAAGAAC+CGG 0.487872 7.1:-67994172 MS.gene53798:CDS
AAGAAAGAGAAAACTTCCTC+CGG 0.490075 7.1:-67996649 MS.gene53798:CDS
ACAGATACGTGAACAGAAAA+GGG 0.490199 7.1:-68001562 MS.gene53798:intron
TCTTCTAAATCTTCTCTCAA+AGG 0.496466 7.1:-68002326 MS.gene53798:intron
GGTTACAGCATGTGGTCTGC+TGG 0.496699 7.1:-67995294 MS.gene53798:CDS
CTTTGCTCTATGTGCTTCTG+TGG 0.498498 7.1:-68001147 MS.gene53798:CDS
TTTACTTGGGTTCAAAAGAA+GGG 0.500605 7.1:+67999506 None:intergenic
GAAGAGTTAATATTTCATGT+TGG 0.502923 7.1:-67995070 MS.gene53798:CDS
AGATCATCCTTTGTATCAGC+TGG 0.504240 7.1:+68000210 None:intergenic
GCACGCCCAAATGAGGTTGA+TGG 0.504852 7.1:-67996708 MS.gene53798:CDS
CTTTACGTTTCGACACTCGT+TGG 0.505082 7.1:+67994402 None:intergenic
CTTGAGGATTATTGTAGGAA+AGG 0.506116 7.1:+67994833 None:intergenic
CTGAAGCGCGTTATTCTGAC+GGG 0.506308 7.1:-67994735 MS.gene53798:CDS
CTTCATAATTGCAGTTCTTG+TGG 0.506384 7.1:-68000068 MS.gene53798:intron
CGTTTGGTATAAATCTCTAC+AGG 0.510956 7.1:+67994201 None:intergenic
GAATTCTATATGGAATCCTA+TGG 0.511247 7.1:-67995599 MS.gene53798:intron
TTGCGAACCGTGTCCTAGCT+GGG 0.517066 7.1:+67995647 None:intergenic
ACAATAATCCTCAAGAGAGC+TGG 0.517105 7.1:-67994825 MS.gene53798:CDS
ATGGAGAGGTTTCTCCATGC+TGG 0.517625 7.1:-67994900 MS.gene53798:CDS
AGCCTAATGTATGAGCCAAC+TGG 0.521673 7.1:+67995380 None:intergenic
GGATAACATTTACAATCCTC+GGG 0.524388 7.1:+68000231 None:intergenic
CATCCTCTCCAGCTCTCTTG+AGG 0.525164 7.1:+67994817 None:intergenic
ACACGGTTCGCAAAATATAA+GGG 0.526098 7.1:-67995637 MS.gene53798:CDS
AAATGCACCATTCTTCTCAC+TGG 0.535563 7.1:-67999696 MS.gene53798:CDS
GATATAGTTGACAAGAATGC+AGG 0.540085 7.1:-67996967 MS.gene53798:CDS
TAACTTTGAAGCAACGCCGC+AGG 0.546239 7.1:+67995340 None:intergenic
TGTAGAGTTTCCTGATGAAG+TGG 0.553217 7.1:-67995686 MS.gene53798:intron
AGAAAGAGAAAACTTCCTCC+GGG 0.557129 7.1:-67996648 MS.gene53798:CDS
GAACTTCAACTTTACACAGT+CGG 0.559401 7.1:+67999538 None:intergenic
GTCCTAGCTGGGACATCCAA+TGG 0.559681 7.1:+67995658 None:intergenic
GATTCTTCTACAGTACTCCC+AGG 0.560569 7.1:-68001080 MS.gene53798:CDS
AAAGATGGTTTGGCCTCTTG+GGG 0.560815 7.1:+67993936 None:intergenic
AGAAGCTCATGCTGCAGATG+AGG 0.562053 7.1:-67995911 MS.gene53798:CDS
GAAGATACAAGATGAACTCA+AGG 0.564697 7.1:-67995941 MS.gene53798:CDS
TGATGAAGTGGATACACCAT+TGG 0.565241 7.1:-67995674 MS.gene53798:CDS
TGTGGCTCTTTAAAGAGCAA+CGG 0.565568 7.1:-68000050 MS.gene53798:CDS
CGAATGAATAGAACAGTGCT+TGG 0.565611 7.1:+68000447 None:intergenic
CGCGAGGACTGTATTCCAGT+TGG 0.565791 7.1:-67995395 MS.gene53798:CDS
GTTCAAGAACTCCGTTGAGA+AGG 0.567385 7.1:+67993999 None:intergenic
ATGTTATCCAGCTGATACAA+AGG 0.568034 7.1:-68000217 MS.gene53798:CDS
TATTCGGAAGAAGCAACTGT+TGG 0.570763 7.1:+68001047 None:intergenic
ACCTGATATTCTGAAGTCCC+CGG 0.571667 7.1:+67996630 None:intergenic
CATTGCAGAATGGGAATGAG+TGG 0.572525 7.1:-68002389 None:intergenic
TTACCAGGCACGCCCAAATG+AGG 0.574379 7.1:-67996715 MS.gene53798:intron
TTACTTGGGTTCAAAAGAAG+GGG 0.574385 7.1:+67999507 None:intergenic
CAAGAGACCTAAATACAGAA+AGG 0.576022 7.1:+68000475 None:intergenic
AACTTTGAAGCAACGCCGCA+GGG 0.578318 7.1:+67995341 None:intergenic
AAGATAACCAGTGAGAAGAA+TGG 0.578930 7.1:+67999689 None:intergenic
AGATGAGATGCATGATGCAA+AGG 0.579255 7.1:-67999463 MS.gene53798:intron
CCTGAAGCGCGTTATTCTGA+CGG 0.584069 7.1:-67994736 MS.gene53798:CDS
TGGTGATCTACTCTCATGCA+TGG 0.586716 7.1:-68000695 MS.gene53798:CDS
GAAGCTCATGCTGCAGATGA+GGG 0.590665 7.1:-67995910 MS.gene53798:intron
ACAATCCTCGGGAAATTCTG+AGG 0.594349 7.1:+68000242 None:intergenic
CTGTTGGTATTCCAAATCCT+GGG 0.598130 7.1:+68001063 None:intergenic
TATACTTGCAAAGACAATAC+CGG 0.601405 7.1:-67995315 MS.gene53798:CDS
ATGGGATGAATTCGATGAAG+AGG 0.601876 7.1:-67996165 MS.gene53798:CDS
CTCATGCATGGAAATGGTCA+AGG 0.602514 7.1:-68000683 MS.gene53798:intron
AGATGAAGATGAAGATTCTG+AGG 0.603742 7.1:-67996123 MS.gene53798:CDS
AACTCAACGATCTTACCTCA+TGG 0.611394 7.1:-68000007 MS.gene53798:CDS
AAACGCAGACAAGAACAAGA+TGG 0.613118 7.1:-67994919 MS.gene53798:CDS
AATCCTCAAGAGAGCTGGAG+AGG 0.613954 7.1:-67994820 MS.gene53798:CDS
CACCATTGGATGTCCCAGCT+AGG 0.619403 7.1:-67995660 MS.gene53798:CDS
ACAATACCGGTTACAGCATG+TGG 0.622534 7.1:-67995302 MS.gene53798:CDS
GAAGAGAAACGAGACTTGTG+AGG 0.623454 7.1:+68002344 None:intergenic
AGATTCACTTCCATGTATGG+AGG 0.623829 7.1:-67993894 MS.gene53798:CDS
TGGATGTCCCAGCTAGGACA+CGG 0.625915 7.1:-67995654 MS.gene53798:CDS
TCACACGCCCATCAAATCCA+AGG 0.638209 7.1:-67995092 MS.gene53798:CDS
AAATGAGGTTGATGGTACAA+AGG 0.639316 7.1:-67996700 MS.gene53798:CDS
ATTGCAGAATGGGAATGAGT+GGG 0.644370 7.1:-68002388 None:intergenic
CAGGTACTAAAAGCACCTCA+TGG 0.646730 7.1:-68000715 MS.gene53798:CDS
AAAGAACCGGTTGGTACACA+CGG 0.647276 7.1:-67994159 MS.gene53798:intron
GATCGTTGAGTTCTCCAATG+AGG 0.650248 7.1:+68000018 None:intergenic
GCAATGAAGTGCCTTCTCAA+CGG 0.651139 7.1:-67994010 MS.gene53798:CDS
TTACCATTTGATTCACAGAG+AGG 0.652193 7.1:+67999655 None:intergenic
ACAAACGTGCATTCCCCAAG+AGG 0.657234 7.1:-67993949 MS.gene53798:CDS
CTACTGAAAAGCGTCCAGCA+TGG 0.660758 7.1:+67994886 None:intergenic
GGCCGAATTAAAGAACCGGT+TGG 0.664191 7.1:-67994168 MS.gene53798:CDS
TACAAAGGATGATCTGCACA+AGG 0.676894 7.1:-68000202 MS.gene53798:intron
GATGAAGAGGAGTCAGACTG+TGG 0.677945 7.1:-67996152 MS.gene53798:CDS
GTGAAAACAGAACGCAACGT+CGG 0.679599 7.1:-68002197 MS.gene53798:CDS
TATTTACTCACAATTACACG+AGG 0.682064 7.1:+68001492 None:intergenic
TTACTCACAATTACACGAGG+CGG 0.686976 7.1:+68001495 None:intergenic
CAGACAAGAACAAGATGGAG+AGG 0.687695 7.1:-67994914 MS.gene53798:CDS
TCTTGCCTCAGAATTTCCCG+AGG 0.705216 7.1:-68000247 MS.gene53798:CDS
GAAAGAGAAAACTTCCTCCG+GGG 0.712956 7.1:-67996647 MS.gene53798:CDS
TCCAAACCTTATGAGCCATG+AGG 0.730501 7.1:+67999992 None:intergenic
TGAAGCGCGTTATTCTGACG+GGG 0.739162 7.1:-67994734 MS.gene53798:intron
CAACTGGAATACAGTCCTCG+CGG 0.743583 7.1:+67995396 None:intergenic
AAACAGAAAAGAGAACTCAG+TGG 0.752891 7.1:-68001528 MS.gene53798:CDS
CATATCATGGAAGTACCCTG+CGG 0.756040 7.1:-67995356 MS.gene53798:CDS
TGATATTCTGAAGTCCCCGG+AGG 0.765334 7.1:+67996633 None:intergenic
CATGAGAGTAGATCACCATG+AGG 0.766830 7.1:+68000700 None:intergenic
AATGGAACGAGAAAACCGCG+AGG 0.802550 7.1:-67995411 MS.gene53798:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr7.1 gene 67993877 68002402 67993877 ID=MS.gene53798
chr7.1 mRNA 67993877 68002402 67993877 ID=MS.gene53798.t1;Parent=MS.gene53798
chr7.1 exon 68002327 68002402 68002327 ID=MS.gene53798.t1.exon1;Parent=MS.gene53798.t1
chr7.1 CDS 68002327 68002402 68002327 ID=cds.MS.gene53798.t1;Parent=MS.gene53798.t1
chr7.1 exon 68002157 68002236 68002157 ID=MS.gene53798.t1.exon2;Parent=MS.gene53798.t1
chr7.1 CDS 68002157 68002236 68002157 ID=cds.MS.gene53798.t1;Parent=MS.gene53798.t1
chr7.1 exon 68001503 68001580 68001503 ID=MS.gene53798.t1.exon3;Parent=MS.gene53798.t1
chr7.1 CDS 68001503 68001580 68001503 ID=cds.MS.gene53798.t1;Parent=MS.gene53798.t1
chr7.1 exon 68001031 68001174 68001031 ID=MS.gene53798.t1.exon4;Parent=MS.gene53798.t1
chr7.1 CDS 68001031 68001174 68001031 ID=cds.MS.gene53798.t1;Parent=MS.gene53798.t1
chr7.1 exon 68000684 68000734 68000684 ID=MS.gene53798.t1.exon5;Parent=MS.gene53798.t1
chr7.1 CDS 68000684 68000734 68000684 ID=cds.MS.gene53798.t1;Parent=MS.gene53798.t1
chr7.1 exon 68000446 68000586 68000446 ID=MS.gene53798.t1.exon6;Parent=MS.gene53798.t1
chr7.1 CDS 68000446 68000586 68000446 ID=cds.MS.gene53798.t1;Parent=MS.gene53798.t1
chr7.1 exon 68000203 68000325 68000203 ID=MS.gene53798.t1.exon7;Parent=MS.gene53798.t1
chr7.1 CDS 68000203 68000325 68000203 ID=cds.MS.gene53798.t1;Parent=MS.gene53798.t1
chr7.1 exon 67999999 68000076 67999999 ID=MS.gene53798.t1.exon8;Parent=MS.gene53798.t1
chr7.1 CDS 67999999 68000076 67999999 ID=cds.MS.gene53798.t1;Parent=MS.gene53798.t1
chr7.1 exon 67999659 67999754 67999659 ID=MS.gene53798.t1.exon9;Parent=MS.gene53798.t1
chr7.1 CDS 67999659 67999754 67999659 ID=cds.MS.gene53798.t1;Parent=MS.gene53798.t1
chr7.1 exon 67999464 67999586 67999464 ID=MS.gene53798.t1.exon10;Parent=MS.gene53798.t1
chr7.1 CDS 67999464 67999586 67999464 ID=cds.MS.gene53798.t1;Parent=MS.gene53798.t1
chr7.1 exon 67996960 67997028 67996960 ID=MS.gene53798.t1.exon11;Parent=MS.gene53798.t1
chr7.1 CDS 67996960 67997028 67996960 ID=cds.MS.gene53798.t1;Parent=MS.gene53798.t1
chr7.1 exon 67996632 67996730 67996632 ID=MS.gene53798.t1.exon12;Parent=MS.gene53798.t1
chr7.1 CDS 67996632 67996730 67996632 ID=cds.MS.gene53798.t1;Parent=MS.gene53798.t1
chr7.1 exon 67996097 67996192 67996097 ID=MS.gene53798.t1.exon13;Parent=MS.gene53798.t1
chr7.1 CDS 67996097 67996192 67996097 ID=cds.MS.gene53798.t1;Parent=MS.gene53798.t1
chr7.1 exon 67995911 67995986 67995911 ID=MS.gene53798.t1.exon14;Parent=MS.gene53798.t1
chr7.1 CDS 67995911 67995986 67995911 ID=cds.MS.gene53798.t1;Parent=MS.gene53798.t1
chr7.1 exon 67995600 67995703 67995600 ID=MS.gene53798.t1.exon15;Parent=MS.gene53798.t1
chr7.1 CDS 67995600 67995703 67995600 ID=cds.MS.gene53798.t1;Parent=MS.gene53798.t1
chr7.1 exon 67995260 67995519 67995260 ID=MS.gene53798.t1.exon16;Parent=MS.gene53798.t1
chr7.1 CDS 67995260 67995519 67995260 ID=cds.MS.gene53798.t1;Parent=MS.gene53798.t1
chr7.1 exon 67995049 67995135 67995049 ID=MS.gene53798.t1.exon17;Parent=MS.gene53798.t1
chr7.1 CDS 67995049 67995135 67995049 ID=cds.MS.gene53798.t1;Parent=MS.gene53798.t1
chr7.1 exon 67994735 67994965 67994735 ID=MS.gene53798.t1.exon18;Parent=MS.gene53798.t1
chr7.1 CDS 67994735 67994965 67994735 ID=cds.MS.gene53798.t1;Parent=MS.gene53798.t1
chr7.1 exon 67994352 67994430 67994352 ID=MS.gene53798.t1.exon19;Parent=MS.gene53798.t1
chr7.1 CDS 67994352 67994430 67994352 ID=cds.MS.gene53798.t1;Parent=MS.gene53798.t1
chr7.1 exon 67994160 67994223 67994160 ID=MS.gene53798.t1.exon20;Parent=MS.gene53798.t1
chr7.1 CDS 67994160 67994223 67994160 ID=cds.MS.gene53798.t1;Parent=MS.gene53798.t1
chr7.1 exon 67993877 67994034 67993877 ID=MS.gene53798.t1.exon21;Parent=MS.gene53798.t1
chr7.1 CDS 67993877 67994034 67993877 ID=cds.MS.gene53798.t1;Parent=MS.gene53798.t1
Gene Sequence

>MS.gene53798

ATGGGAATGAGTGGGACGCGAGTGCAAGTGAATAAACCTCACAAGTCTCGTTTCTCTTCTAAATCTTCTCTCAAAGGTTTGTCACGTCATGATTTTGATCATCACGTATAATCTTCATGTATTGCTTTAATTAACGGCTTGTTTGCTTTTTTATTGAGTTGTTTAGATAGAATAATTCCAATTGTGAAAACAGAACGCAACGTCGGTAAAGGAGCACGTGCTGCTCGATTACAGAGAAATAAAATGGTACCTATTATATGTTCTTGTTTGTGCTTTACTCTATACTTGGAGCACTGACACTTCTGATCAAAGGTGTTTACAGACACATATAATTACATTCAATTATTCAAAATAGTACCGGTGTCGAAGTGCAGTGTTGGGCTGCTTTATAGGTGCTTTATCGTTGTATTTAGAAAGAGAGAAAAAAAAAACACAATTTAGTACCAAGTATATGAAAACCATCAAAATTTTTGTTGAGCCTTGCGGCAAAACTCGCATGCAAAGTGTCTGAGAAGTGGAAAATTGTGGGCTCGAATCTGCGCCCAACTTTTCAAATGTCCCTGCAGTATTCTGAGTAGGATACTGAAAATCGTCAATTTAGTCCTTGTAGTTATGAAAATTTGTAATGTCAGTCCTAACATCTAAATGACAGAGAAAAAATTGATGATTTTTATAACTTTAAGAACTAATTATTATATTTGTATACTTCAGAGACTAAATTAGATAGAGAGTGATACATCAAAGATTAATTGATGGTTTATTTATTCTTGTAGTTACTATTTCCAGAGTTGTCTCTGATTGATCTGTGAATTTACAATACAGATACGTGAACAGAAAAGGGCTGCAGTTTTGAAACAGAAAAGAGAACTCAGTGGCTCAACAACTCCGCCTCGTGTAATTGTGAGTAAATATTAATTCCGGCTGTCTTTTGTTAAATTGAATTTCACACTTATTTTCAGTATGGTACCGTGTGTCACACATGTCACTCGTTGGTTTTTACGATTTTTCACATAATACTAACTGTGCAGCATAGGTATTAAATATTCACAAGTACTTCAATTCTTTTTACATAATTGTCTATTTTCAAACATGGTTAAATCTTATTTGTGTCAAATAAATGAATATCCTTTCCAATATACATTCAAATGAAAGTATTTCCTGCAAAATTAGAGGTCAAGTTATTAAGTACAAAAGTCGACATTGCTGACATTTTAATGTGCCCTCACAGGTTCTCTTTGCTCTATGTGCTTCTGTGGATTTAGAATCACTTGCAAATGAGCTCTCATCATTATTATCTAAAGATTCTTCTACAGTACTCCCAGGATTTGGAATACCAACAGTTGCTTCTTCCGAATATAAGATTAGAATATCGGTACATTCATCTGATTGATTGCTGCCTTATTATTATCTGATAATTAGAAAATTTATTGTACATGAATTGAGTTGTTGATAGCTAAAATAGACTTTTGAATTTAATATTTAATGATATGAAGTCATGAATTTAATAATTTATTATTCATTCTCATATATCAGAATATTGACCTGCATTTGGGAAACTAGGACGACAATTGTAATTTAAACATGTTTTCGAATATATAATGATCCTTTTCCCAAGCACGCTGTGATGGATGGGATTTGACATGAACTTTGTATGCTACATGGCTACAGGTACTAAAAGCACCTCATGGTGATCTACTCTCATGCATGGAAATGGTCAAGGTATCAATTTTTACATTTGCGTTGCCTCCATGACTTCTGTTTATGGCTGTGGAATGGGTTTTGATTACTGCTGTGTTGGACACTGTTTATGTTGTAGGTTGCTGATCTACTGGTTTTTGTGGTCTCGGCAAAGTCTTCATGTGAAGAAACTGCTTCTCAGTACATTGATTCGTTTGGAAATCAATGCCTTTCTGTATTTAGGTCTCTTGGTCTACCAAGCACTGTTCTATTCATTCGTGTAAGTTAGGATGGATCATATTTTTGGAACTTATGAATTTATTTACATGAGCTTATAGTCATTTCATCAAGAAATTTAATTTTTAATTGATTATGTAGAATTTTTATTCTATGCTCTCAGGATCTTCCCACTGAGCTAAAACAAAGAAATGAACTAAAGAAGTTGTGCTCATCAAGTCTTGCCTCAGAATTTCCCGAGGATTGTAAATGTTATCCAGCTGATACAAAGGATGATCTGCACAAGGTAATTATTTCAACATTTGTTGGCTGAAAAAAATCTAATTGTAACCGTTAAGCTTATCGTCTAATGTATATCCAGTTTGATAGTTTAACTTTAAGCCTTTCACTCCTTCCGTCTTCATAATTGCAGTTCTTGTGGCTCTTTAAAGAGCAACGGCTTAAAGTTCCTCATTGGAGAACTCAACGATCTTACCTCATGGCTCATAAGGTTTGGACTCAACAGCCTAGTCATATTGGTTTCAATCATGTTTTCTAAGATAGTTTCTTAGTATATGTAGTTTTGTAGCACTAAACAATACACAATATTATAACTTTTTTAACACGGGTGAATAAATGATTTGTGATCATATTATATATATTCATCTTTTGTGTCAAGCCCTTATGTAATTTGTTTAAGATGTTGAATGATGCTATTGTATTGAGCTTATCATGTTTTCAACCCTAAATTACAGGTCGATATTGATGATCATATTGATGGTAATTCTGACAAATGCACCATTCTTCTCACTGGTTATCTTTGTGCTCATAGCCTCTCTGTGAATCAAATGGTAACGAGCAAAATCATGTAATAGGTTACAGTTTCATTAAATTGTTGGTGGTCTCACATTTTGTTTGTTCAGGTTCATGTATCAGGTGCTGAAGATTTCCGACTGTGTAAAGTTGAAGTTCTCGAAGATCCCCTTCTTTTGAACCCAAGTAAAAATCAGGACCTAATGGGTTCAGATGAGATGCATGATGCAAAGGTATAGAGTTGTACATAAAATTTTTAGCCATTAAGGGTTTCTACATATATTATTTAATTATATGACAGTAAGGTTAAAACATATAATACGCATATTTATAGGTCGGCTATGAGCCTGTGCAAAGAGGCTTGTAGCATGCAACCTCGAAGTTGTGAGGACCCCACATTCTCAAAAAGTGATGAGTTTAAGTGACCTTGCAACGAAGTTGTGTTTTCTATCAGTTTTGAGGGGCCTAAATTCATACTGGGAAATGTTCAACGCTTATAACAAAGGTTTTGAATACTGGCCCGCAAGTGCATTAATCATTGTTGGCAGACTCTAATGTCCTTTCTATACAACTTATTTATAGACATCTTCCCTGTATTTTGCTTGCCAAACCTGACGTGGGACTTACATCTTTGTTTAGTATGATGTTCAATGCAAACTTGTGTAGCAACTGGTGAACAAGATTCCCCATTTGCGCCTTGAACTTCTAGAGTTGGCATTGGGACTTCCACTTTCATATTCCGAGTTTGACGACCAACTACTAGGGAAACAGTTACGTTAGCTGCCTGATTCATTTGATTCTCTAGTGTTGACTTACAAACAAAATCCTCCACACCAACAACACAAGAATCCTTCATAAGAAAACCCGCTTCTTGAAGCTTGGATAACTTCATGAAAGATCCAGAACCAAAGGCTATTGAACTTGCATTGAAATCATGATTAAGTTCTTTTGTAATTGTCATGTTGGTATTGAGTTGATTGAATAAAAGCAACATAAGTTCCACATCTCTACTCCATCCCTTTGACAAATTAGCAGTTTTCATAGCCTCCAAATAAATTGATGAGAAGTTGTCTCCTTTGTGCCCTGTTGATACAGAAGAAAACTCCATGCACAGCCGCCAACGACTAAAGACTCAGAGTAAATCTTCTCAACATTCAACCGAGAGAAATTCTCAATCTTCCATGTGAATTTCTCAAAAATCTCAACACTTGTTTCTTGATGCTCTACTTCTACAAACACAATAAGATTGACGTAGCCAGCTTCTAAGAACGGCCCGACTTTGAAAGAGAAAGAAGTCACACTTACTGAGTTTGTAGAAATGGAACATCAAGAAACAATTGTTGAAATAGTTGAGAAATTCACATGGAAGACTGAAAACTTCTCTCGCTTGAATGTTGAGAAGATTTACTCTGAGCCTTTCGTTGTTGGTGGCTATCCATGGAGGATTCTTCTGTATCCACACGGGGCACAAAGGAGACAACATCTTGTAAATTTATTTGGTGGCTATGTGAACTGCCAATATGTCAAAGGGATGAAGTAGAGATGTGAAACGTAAGTTTTTTTTATTCAATCAATTCAATACCAACATTACAATTACAAAATAACTATGATTTCAATGCACGTTCCATAGCTCAGAGATCCGGATCATTCATGAAGTTATCTAAGCTTCAAGATCCTCAAATGAGTTTTCTTGTAAAAGATGCGCGTATTGTTGTACGGAGAATTTTCTTTTTAAGTCAAATCTTGAGAATCAAGTGAATCAAACAACTAACGTAACTGTTTCCCTAAGAGGTGGAAGTCAAACTGGGCATATGAAAGTAGAAAGTCCAATGCCAAATTCAGAAGTTCAAGGCCTAAATGTTGAAACTCATTCAACAATTTGTATACAAGTTTGTTAGTCCCACATCAGACAGTTTGGCAAGCAAAAGAGAGGGAAACTGTAAATAAGTTGTGTAGAATGGACTTCAGAGCGTGCAAACAAAGATTAATGCACTTACAGTCCCAGTATTCAGAAACTTGTTGTAAGTGTTGAACACTTCACAGTACAATTATTAATTTTTTTGTTGTTTTTATAATAGTTTCTATCTATGAGTTGTGTTTTGAATTAAAAAATCTGATTTAAAACCCAGCTTGGTTGAAGAGCCATTTAAACTCATCACTTTTTAGAATTTTGATCCCTCAAAATTTTGAGGCCCTGTTCCATGGGGATGTTTGTGCAAGCCCATAGCCGCCCCCGCCTAATACTATTAAGGATCCAAATTCATCTGCTCTAGAACACAATATCTCAGGAGTGTTAGGTCGGTTATTTCGTAGCCTTTAAAAAAAATTAACACAAGTAGGAACCTCTTTTTATATATGCAAGGCCGTCTTTAACACTTTGGAGGTCCTGCTCTAATCTAAAAGACGGCCTTGCATATTTAAGCATGTAAATAAAATCATTGAAATAACACTTTTAATTGGTGAGGTCATTTTTTAGTCTATTAGAAAACACTGTCACCCTTCCCCCTTTTAAGTTTGATATAATGAAATTTTAAGTCTACTGTGCATGCAACATTTGGACATTGTGATCTTCCAAATATTTTACCTTTTTAATCCATACGTTCTTTTACTATTTGTCTATATCTACACTTTACTTTTTCCTCTGCTTTCCTGCTTTATAATGTTTCAGGTCATTCGTTCTCTGGTTCCAGATCGTCAAAATCAGGAAGATATAGTTGACAAGAATGCAGGACAGCAGGTAGATAAGGAGATCCTATTTCTAATTCTGTCATTACCATTTGTTAATTGTAATATTTGATTTGAGATTCTCTACTACTAATTTCTGAACTGACATCATTGAATTGAATACACGAGTACTCTTTAATTTTATTTTTTGCACACGACAAAATGATAGAATTAGTTCATATTAACTGTAAGATTTTTCTTTTTAGCTTAGAATTTTGAGTGATATCATTCCCTATTACCAGGCACGCCCAAATGAGGTTGATGGTACAAAGGCTGACGAAGATCATAAGCATAAGAAAACAAGAAAGAGAAAACTTCCTCCGGGGACTTCAGAATATCAGGTTTGAGCTTGTTTTCTTGATACACTTATTTCTGAAAGATTTTCTCGCCCTTATTATTTTTATTATTTTTCCTGATGTTTTCTGTCATATTTATGCTTACCAAGTAGGTACTACCTACGTCTCATATTATATGTCTTTTTAAGATAATGCACATGTCCTAAGAAAATGATTAGTTATGTTGAATTCAATAGTAAAATAGTGTGTATAGTGTATATAGTCTAAACTACACATTAGTTAGAGGTTGAAAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTGAAATAGTTCGGTGGACTATTTAATTGAATGACAAATAACAAGTCACAAAAATGATTTAAATGAAACACTTATAATGAGACAGAGCCACGAAGGTAGTATCTAATATGGAAATAATAAGTTTCTGGCCTTTATTTTGATTTTCAGGCTGCATGGGATGAATTCGATGAAGAGGAGTCAGACTGTGGCATCGAAGATGAAGATGAAGATTCTGAGGAAGAAAGTGACAATGTTTCAATGATGGTTAGTTTCTAACAACTCAATACTGAAGTGTCTGTCTTGTCATCGAACCTTAGGCATCATTGGATAGTCTCCGGTCATCAATGCAAGATTATTTTTTTGTTGGATTTCAGGAAGTAGATGACATGACTGAAGAGAAGATACAAGATGAACTCAAGGCAATTAAAGAAGCTCATGCTGCAGATGAGGGTAATTTTATTATTTTATGTTCTCATGTTTTGTCCTTTTGTGTCTAAAGTTGAAATTAAACCTTGTATTTCAATTTACACTTTCTGGTTCCTACATCTTGCACTTTGTTGGAAATTTCGACATAGGTGACATGGAATATACCTGTCTGTGGATGATTTGCAGTTGTATTGTTTTGACGATTTGTTGCTTGATATACGTTTGTTGTAGAGTTTCCTGATGAAGTGGATACACCATTGGATGTCCCAGCTAGGACACGGTTCGCAAAATATAAGGGACTCAAGTCTATTCGGAATTCTATATGGAATCCTATGGTATGTTTATCATTTGGTTATTCTTTAATTAGTCGTTGCCATTAACAGCAAAAAATATCTGACATTTCTAATTATATCAGGGATCTCTACCCCAAGATTATCCCAAAAATTATAATTATCATAGTTTCAAAAGAACACAAAAACAGGTTCTTGCTAAAGCTTTAGAAATGGAACGAGAAAACCGCGAGGACTGTATTCCAGTTGGCTCATACATTAGGCTGCATATCATGGAAGTACCCTGCGGCGTTGCTTCAAAGTTATGTATACTTGCAAAGACAATACCGGTTACAGCATGTGGTCTGCTGGAACACGAAAACGAAGTATCTGTCCTTCATTTCAGGTATAATTATGCTTTATCATTTTACTATTTCATTGTTAGTGCTTTTAATGCCGTACTAATTAAAAAGTGATCCTCTGAATATTCAAAAGACGTGTCATGAAATAAAGTCGCTCATGTTTTGTAGTGTGAAGAAGCACGAAACGTATCACACGCCCATCAAATCCAAGGAAGAGTTAATATTTCATGTTGGGTTTCGGCAATTTGTTTGCAGGTATGGTATTCAATTTAAACAACCATGACATAATAAAACTCGTTAGGAAAAAAAAGTATAAGAAATGGTGACAAATTTTGCAGGCCGATTTTCTCATGCGAATTCAAAAACGCAGACAAGAACAAGATGGAGAGGTTTCTCCATGCTGGACGCTTTTCAGTAGCTTCAGTTTATGCACCTATTTCATTTTCTCCCTTTCCTACAATAATCCTCAAGAGAGCTGGAGAGGATGCTGCACCAGAAGTAGCTGCTTTGGGCTCACTGAAAACTGTTGATCGAGATAGGATAATCCTGAAGCGCGTTATTCTGACGGGGTATGTTTGTTGATGTTTGCCATAACCTATCAATTAAAAGCTGTTAGATATGAAAATATCTCATCATATATCAAAATTGTTTTATAATGTCTTAGGTTATCTATTTGCATTAGTTTCTATATTTCAATATTTCTACATTGTTATCGCCTATTACTTCAACAAAAATCCTTGCATGTTACTTTTTTGTCGACGCCTTTTCAATACTGATTCTGGCAACTTTGTAGTTATTGTCATTTAAGAGTTGGGACAATCCCCAATAAATTTGTTTTACTAATTAGAAGCTTTTAAACATTTTGTGGTGCAGTTACGCCCAACGAGTGTCGAAACGTAAAGCTTCTGTGAAACACATGTTTTATAATCCAGAGGATGTTAAATTCTTTAAGGTAAGAAAAAATGGTACCCAGTTTCTGAAATCATTACTTTCTCTCCATGATGAATTGGATAGAATTGACATTAATTTGTTCTCAGTTTTCACACTAACGAGATTTCTTAATGTGGGTGGTAATTGCAGCCTGTAGAGATTTATACCAAACGCAGTATTCGTGGCCGAATTAAAGAACCGGTTGGTACACACGGTATGTTATGTTAGAAATCTTTACCTTGTATCTTTCAAAGGTCATTTATTTATATTTCAGATTATATAGCATTCATATAAATCTATTATATCCTGATGGTATTATTCTGTTTATTGTTTGTTCAGGAGCAATGAAGTGCCTTCTCAACGGAGTTCTTGAACAGAGTGATACTGTATGCATGAATTTATACAAACGTGCATTCCCCAAGAGGCCAAACCATCTTTTTCCTTTAAGCTCTGCTTCAGATTCACTTCCATGTATGGAGGATCAAAATGCAGTTTAG

Protein sequence

>MS.gene53798.t1

MGMSGTRVQVNKPHKSRFSSKSSLKDRIIPIVKTERNVGKGARAARLQRNKMIREQKRAAVLKQKRELSGSTTPPRVIVLFALCASVDLESLANELSSLLSKDSSTVLPGFGIPTVASSEYKIRISVLKAPHGDLLSCMEMVKVADLLVFVVSAKSSCEETASQYIDSFGNQCLSVFRSLGLPSTVLFIRDLPTELKQRNELKKLCSSSLASEFPEDCKCYPADTKDDLHKFLWLFKEQRLKVPHWRTQRSYLMAHKVDIDDHIDGNSDKCTILLTGYLCAHSLSVNQMVHVSGAEDFRLCKVEVLEDPLLLNPSKNQDLMGSDEMHDAKVIRSLVPDRQNQEDIVDKNAGQQARPNEVDGTKADEDHKHKKTRKRKLPPGTSEYQAAWDEFDEEESDCGIEDEDEDSEEESDNVSMMEVDDMTEEKIQDELKAIKEAHAADEEFPDEVDTPLDVPARTRFAKYKGLKSIRNSIWNPMGSLPQDYPKNYNYHSFKRTQKQVLAKALEMERENREDCIPVGSYIRLHIMEVPCGVASKLCILAKTIPVTACGLLEHENEVSVLHFSVKKHETYHTPIKSKEELIFHVGFRQFVCRPIFSCEFKNADKNKMERFLHAGRFSVASVYAPISFSPFPTIILKRAGEDAAPEVAALGSLKTVDRDRIILKRVILTGYAQRVSKRKASVKHMFYNPEDVKFFKPVEIYTKRSIRGRIKEPVGTHGAMKCLLNGVLEQSDTVCMNLYKRAFPKRPNHLFPLSSASDSLPCMEDQNAV