AlfalfaGEDB | MS.gene62834

M. sativa cultivar XinJiangDaYe / MS.gene62834

KEGG: K02953
GO: GO:0003674 GO:0003735 GO:0005198 GO:0005575 GO:0005840 GO:0006412 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0019538 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0071704 GO:0110165 GO:1901564 GO:1901566 GO:1901576
PFAM: PF00312.25 PF08069.15

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene62834.t1	XP_003608807.1	100	151	0	0	1	151	1	151	6.00E-78	300.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene62834.t1	P59224	92.1	151	12	0	1	151	1	151	1.2e-74	280.4

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene62834.t1	G7JLB5	100.0	151	0	0	1	151	1	151	4.3e-78	300.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049129	MS.gene62834	-0.857442	1.63E-62	-1.69E-46
MS.gene049140	MS.gene62834	0.836268	1.03E-56	-1.69E-46
MS.gene049166	MS.gene62834	0.804306	2.30E-49	-1.69E-46
MS.gene049255	MS.gene62834	0.829635	4.61E-55	-1.69E-46
MS.gene049411	MS.gene62834	0.838674	2.50E-57	-1.69E-46
MS.gene049580	MS.gene62834	0.853181	2.83E-61	-1.69E-46
MS.gene049887	MS.gene62834	0.811414	7.09E-51	-1.69E-46
MS.gene050277	MS.gene62834	0.873638	1.26E-67	-1.69E-46
MS.gene050317	MS.gene62834	0.802917	4.47E-49	-1.69E-46
MS.gene050320	MS.gene62834	0.866308	3.13E-65	-1.69E-46
MS.gene050437	MS.gene62834	0.816856	4.46E-52	-1.69E-46
MS.gene050689	MS.gene62834	0.807287	5.44E-50	-1.69E-46
MS.gene050752	MS.gene62834	0.893891	4.12E-75	-1.69E-46
MS.gene050838	MS.gene62834	0.90944	5.68E-82	-1.69E-46
MS.gene050945	MS.gene62834	0.811394	7.16E-51	-1.69E-46
MS.gene050955	MS.gene62834	0.872193	3.84E-67	-1.69E-46
MS.gene051003	MS.gene62834	0.87767	5.22E-69	-1.69E-46
MS.gene051063	MS.gene62834	0.827167	1.82E-54	-1.69E-46
MS.gene051233	MS.gene62834	0.843739	1.16E-58	-1.69E-46
MS.gene051234	MS.gene62834	0.876742	1.10E-68	-1.69E-46
MS.gene051245	MS.gene62834	0.809542	1.80E-50	-1.69E-46
MS.gene051328	MS.gene62834	0.817209	3.71E-52	-1.69E-46
MS.gene051330	MS.gene62834	0.849691	2.75E-60	-1.69E-46
MS.gene051343	MS.gene62834	0.840788	7.04E-58	-1.69E-46
MS.gene05134	MS.gene62834	0.830703	2.53E-55	-1.69E-46
MS.gene051451	MS.gene62834	0.834821	2.40E-56	-1.69E-46
MS.gene051676	MS.gene62834	0.804117	2.52E-49	-1.69E-46
MS.gene051700	MS.gene62834	0.824289	8.75E-54	-1.69E-46
MS.gene051746	MS.gene62834	0.891515	3.70E-74	-1.69E-46
MS.gene051748	MS.gene62834	0.893155	8.18E-75	-1.69E-46
MS.gene051756	MS.gene62834	0.850081	2.14E-60	-1.69E-46
MS.gene051850	MS.gene62834	0.87346	1.45E-67	-1.69E-46
MS.gene051885	MS.gene62834	0.820299	7.38E-53	-1.69E-46
MS.gene05188	MS.gene62834	0.853079	3.03E-61	-1.69E-46
MS.gene051902	MS.gene62834	0.83258	8.72E-56	-1.69E-46
MS.gene051903	MS.gene62834	0.923579	2.21E-89	-1.69E-46
MS.gene051975	MS.gene62834	0.842535	2.44E-58	-1.69E-46
MS.gene052072	MS.gene62834	0.808099	3.66E-50	-1.69E-46
MS.gene052133	MS.gene62834	0.808077	3.70E-50	-1.69E-46
MS.gene052296	MS.gene62834	0.820542	6.49E-53	-1.69E-46
MS.gene052335	MS.gene62834	0.808758	2.65E-50	-1.69E-46
MS.gene052434	MS.gene62834	0.800059	1.72E-48	-1.69E-46
MS.gene052479	MS.gene62834	0.847811	9.13E-60	-1.69E-46
MS.gene052818	MS.gene62834	-0.848725	5.10E-60	-1.69E-46
MS.gene052947	MS.gene62834	0.911662	4.72E-83	-1.69E-46
MS.gene053058	MS.gene62834	0.8677	1.13E-65	-1.69E-46
MS.gene053109	MS.gene62834	0.872921	2.19E-67	-1.69E-46
MS.gene053564	MS.gene62834	0.831669	1.46E-55	-1.69E-46
MS.gene053786	MS.gene62834	0.834611	2.71E-56	-1.69E-46
MS.gene053952	MS.gene62834	0.89198	2.42E-74	-1.69E-46
MS.gene054403	MS.gene62834	0.89579	6.86E-76	-1.69E-46
MS.gene05469	MS.gene62834	0.832517	9.04E-56	-1.69E-46
MS.gene054937	MS.gene62834	0.837292	5.67E-57	-1.69E-46
MS.gene055162	MS.gene62834	0.812267	4.62E-51	-1.69E-46
MS.gene055174	MS.gene62834	0.802394	5.73E-49	-1.69E-46
MS.gene055311	MS.gene62834	0.803755	3.00E-49	-1.69E-46
MS.gene055424	MS.gene62834	0.858748	6.66E-63	-1.69E-46
MS.gene055555	MS.gene62834	0.847905	8.60E-60	-1.69E-46
MS.gene055808	MS.gene62834	0.806949	6.41E-50	-1.69E-46
MS.gene056043	MS.gene62834	-0.819765	9.78E-53	-1.69E-46
MS.gene056075	MS.gene62834	0.896343	4.04E-76	-1.69E-46
MS.gene056091	MS.gene62834	0.82048	6.71E-53	-1.69E-46
MS.gene056181	MS.gene62834	0.800143	1.65E-48	-1.69E-46
MS.gene056215	MS.gene62834	0.80057	1.35E-48	-1.69E-46
MS.gene056403	MS.gene62834	0.81659	5.11E-52	-1.69E-46
MS.gene056580	MS.gene62834	0.826776	2.25E-54	-1.69E-46
MS.gene056605	MS.gene62834	0.812327	4.48E-51	-1.69E-46
MS.gene056631	MS.gene62834	0.878805	2.09E-69	-1.69E-46
MS.gene056752	MS.gene62834	0.822438	2.37E-53	-1.69E-46
MS.gene056896	MS.gene62834	0.806498	7.99E-50	-1.69E-46
MS.gene056986	MS.gene62834	0.852154	5.56E-61	-1.69E-46
MS.gene057057	MS.gene62834	0.83934	1.68E-57	-1.69E-46
MS.gene057094	MS.gene62834	0.915048	9.34E-85	-1.69E-46
MS.gene057102	MS.gene62834	0.812249	4.66E-51	-1.69E-46
MS.gene057206	MS.gene62834	0.801449	8.96E-49	-1.69E-46
MS.gene057234	MS.gene62834	0.868155	8.06E-66	-1.69E-46
MS.gene057694	MS.gene62834	0.808024	3.79E-50	-1.69E-46
MS.gene057705	MS.gene62834	0.887585	1.25E-72	-1.69E-46
MS.gene05781	MS.gene62834	0.875826	2.27E-68	-1.69E-46
MS.gene057890	MS.gene62834	-0.806622	7.52E-50	-1.69E-46
MS.gene057999	MS.gene62834	0.860038	2.73E-63	-1.69E-46
MS.gene058054	MS.gene62834	0.814775	1.30E-51	-1.69E-46
MS.gene058055	MS.gene62834	0.835085	2.06E-56	-1.69E-46
MS.gene058074	MS.gene62834	0.852936	3.33E-61	-1.69E-46
MS.gene058238	MS.gene62834	0.856879	2.39E-62	-1.69E-46
MS.gene058245	MS.gene62834	0.811099	8.29E-51	-1.69E-46
MS.gene058261	MS.gene62834	0.818117	2.32E-52	-1.69E-46
MS.gene058364	MS.gene62834	0.833568	4.95E-56	-1.69E-46
MS.gene058654	MS.gene62834	0.811919	5.50E-51	-1.69E-46
MS.gene058852	MS.gene62834	0.805523	1.28E-49	-1.69E-46
MS.gene058906	MS.gene62834	0.827117	1.87E-54	-1.69E-46
MS.gene059146	MS.gene62834	0.856981	2.23E-62	-1.69E-46
MS.gene059171	MS.gene62834	0.836082	1.15E-56	-1.69E-46
MS.gene059227	MS.gene62834	0.850382	1.76E-60	-1.69E-46
MS.gene059726	MS.gene62834	0.814524	1.47E-51	-1.69E-46
MS.gene059830	MS.gene62834	0.800688	1.28E-48	-1.69E-46
MS.gene059898	MS.gene62834	0.815846	7.50E-52	-1.69E-46
MS.gene06001	MS.gene62834	0.909187	7.52E-82	-1.69E-46
MS.gene06011	MS.gene62834	0.89083	6.91E-74	-1.69E-46
MS.gene060429	MS.gene62834	0.826429	2.73E-54	-1.69E-46
MS.gene060463	MS.gene62834	0.805394	1.36E-49	-1.69E-46
MS.gene060465	MS.gene62834	0.80887	2.50E-50	-1.69E-46
MS.gene060586	MS.gene62834	0.806836	6.78E-50	-1.69E-46
MS.gene060763	MS.gene62834	0.884702	1.53E-71	-1.69E-46
MS.gene060830	MS.gene62834	0.840428	8.75E-58	-1.69E-46
MS.gene060917	MS.gene62834	0.810489	1.12E-50	-1.69E-46
MS.gene061100	MS.gene62834	0.803919	2.77E-49	-1.69E-46
MS.gene061145	MS.gene62834	0.82516	5.45E-54	-1.69E-46
MS.gene06118	MS.gene62834	0.828419	9.08E-55	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene62834	MS.gene64519	PPI
MS.gene62834	MS.gene003175	PPI
MS.gene62834	MS.gene89206	PPI
MS.gene003693	MS.gene62834	PPI
MS.gene017434	MS.gene62834	PPI
MS.gene62834	MS.gene019309	PPI
MS.gene62834	MS.gene72285	PPI
MS.gene070323	MS.gene62834	PPI
MS.gene59369	MS.gene62834	PPI
MS.gene62834	MS.gene26077	PPI
MS.gene62834	MS.gene83444	PPI
MS.gene62834	MS.gene030418	PPI
MS.gene62834	MS.gene015586	PPI
MS.gene028153	MS.gene62834	PPI
MS.gene01984	MS.gene62834	PPI
MS.gene62834	MS.gene50744	PPI
MS.gene62834	MS.gene072782	PPI
MS.gene74552	MS.gene62834	PPI
MS.gene62834	MS.gene073888	PPI
MS.gene62834	MS.gene048789	PPI
MS.gene62834	MS.gene58159	PPI
MS.gene62834	MS.gene053443	PPI
MS.gene62834	MS.gene048301	PPI
MS.gene53517	MS.gene62834	PPI
MS.gene82426	MS.gene62834	PPI
MS.gene02090	MS.gene62834	PPI
MS.gene62834	MS.gene70303	PPI
MS.gene62834	MS.gene52173	PPI
MS.gene023799	MS.gene62834	PPI
MS.gene62834	MS.gene72768	PPI
MS.gene011464	MS.gene62834	PPI
MS.gene42236	MS.gene62834	PPI
MS.gene27648	MS.gene62834	PPI
MS.gene03126	MS.gene62834	PPI
MS.gene003290	MS.gene62834	PPI
MS.gene62834	MS.gene061898	PPI
MS.gene02854	MS.gene62834	PPI
MS.gene018560	MS.gene62834	PPI
MS.gene030707	MS.gene62834	PPI
MS.gene28161	MS.gene62834	PPI
MS.gene62834	MS.gene29448	PPI
MS.gene09852	MS.gene62834	PPI
MS.gene72163	MS.gene62834	PPI
MS.gene62834	MS.gene23314	PPI

Query id	Subject id	identity %	alignment length	mismatches	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene62834.t1	MTR_4g102170	100.000	151	0	1	151	1	151	7.05e-109	306
MS.gene62834.t1	MTR_4g024550	94.040	151	9	1	151	1	151	3.21e-102	289
MS.gene62834.t1	MTR_5g011910	92.715	151	11	1	151	1	151	1.51e-100	285
MS.gene62834.t1	MTR_4g024265	92.035	113	9	1	113	1	113	9.29e-70	215

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene62834.t1	AT4G00100	92.053	151	12	0	1	151	1	151	7.67e-101	286
MS.gene62834.t1	AT3G60770	92.053	151	12	0	1	151	1	151	1.91e-100	285

Find 44 sgRNAs with CRISPR-Local

Find 112 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTCAGATCGGTGTTATTCTT+AGG	0.199752	8.1:-21354262	MS.gene62834:CDS
CCAGACTGGTGGGAGCTTCT+TGG	0.208703	8.1:+21353416	None:intergenic
ACTTGGAGTCCTTATCCTTT+CGG	0.353333	8.1:+21353496	None:intergenic
TCAAGAAGGCAGTTTCAATT+AGG	0.353735	8.1:-21353536	MS.gene62834:CDS
TACAGATCCTCAGGAATTTC+CGG	0.365553	8.1:+21353567	None:intergenic
CACAAGAATCAACCTGAACT+TGG	0.390376	8.1:+21353479	None:intergenic
TCAGATCGGTGTTATTCTTA+GGG	0.403625	8.1:-21354261	MS.gene62834:CDS
AGTTTCAATTAGGAAGCATT+TGG	0.418745	8.1:-21353526	MS.gene62834:CDS
CCAAGAAGCTCCCACCAGTC+TGG	0.424976	8.1:-21353416	MS.gene62834:CDS
AAACTGCCTTCTTGATCAAA+TGG	0.434219	8.1:+21353544	None:intergenic
TATTTGCAAGTTTGCAAAGA+AGG	0.458801	8.1:-21354297	MS.gene62834:CDS
GGAGAGGAACCGAAAGGATA+AGG	0.464398	8.1:-21353505	MS.gene62834:CDS
AGGATAAGGACTCCAAGTTC+AGG	0.467196	8.1:-21353491	MS.gene62834:CDS
ATCAAATGGTACAGATCCTC+AGG	0.478375	8.1:+21353558	None:intergenic
TCACTGGCAGCAAAATCCTT+AGG	0.488968	8.1:-21354208	MS.gene62834:CDS
CAAGTTCAGGTTGATTCTTG+TGG	0.500791	8.1:-21353478	MS.gene62834:CDS
GTTATTCTTAGGGATTCTCA+TGG	0.504564	8.1:-21354251	MS.gene62834:CDS
GCTCAAGTTAAGTTTATCAC+TGG	0.507100	8.1:-21354224	MS.gene62834:CDS
CATGAGCCTTGAGGATCCTA+AGG	0.520024	8.1:+21354192	None:intergenic
ATCAACAACTGCCAGCACTT+TGG	0.526669	8.1:-21352729	MS.gene62834:CDS
CCTCTGCTTTACCATACAAA+AGG	0.527826	8.1:-21354453	MS.gene62834:CDS
ATTTGCAAGTTTGCAAAGAA+GGG	0.531484	8.1:-21354296	MS.gene62834:CDS
GTAGAGGTCTTGAGCCATCC+TGG	0.536330	8.1:+21354424	None:intergenic
AGAATAACACCGATCTGAGA+TGG	0.551609	8.1:+21354266	None:intergenic
CTTAGGATCCTCAAGGCTCA+TGG	0.558577	8.1:-21354191	MS.gene62834:intron
TCTCTAAGCAACCAAAGTGC+TGG	0.564231	8.1:+21352718	None:intergenic
GTTGATTGTAGGACTTGCAC+CGG	0.579296	8.1:-21353586	MS.gene62834:intron
TCTGTACCATTTGATCAAGA+AGG	0.592710	8.1:-21353550	MS.gene62834:CDS
ACTTACTACTTCCAGACTGG+TGG	0.595917	8.1:+21353405	None:intergenic
CCATACAAAAGGTCTGCACC+AGG	0.597287	8.1:-21354442	MS.gene62834:CDS
ATCATGGGGCGTATGCATAG+TGG	0.599233	8.1:-21354612	MS.gene62834:CDS
GGTACTTACTACTTCCAGAC+TGG	0.601291	8.1:+21353402	None:intergenic
CAATTAGGAAGCATTTGGAG+AGG	0.603553	8.1:-21353521	MS.gene62834:CDS
ATGGGGCGTATGCATAGTGG+CGG	0.611401	8.1:-21354609	MS.gene62834:CDS
TGGGGCGTATGCATAGTGGC+GGG	0.622617	8.1:-21354608	MS.gene62834:intron
AGAACATACCATGAGCCTTG+AGG	0.623812	8.1:+21354183	None:intergenic
TGTAATAGCGAGCAAGACGG+TGG	0.633533	8.1:+21353445	None:intergenic
ACAAAAGGTCTGCACCAGGA+TGG	0.633754	8.1:-21354438	MS.gene62834:CDS
CAAAATCCTTAGGATCCTCA+AGG	0.639899	8.1:-21354198	MS.gene62834:CDS
CTTACTACTTCCAGACTGGT+GGG	0.659946	8.1:+21353406	None:intergenic
GCATTTGGAGAGGAACCGAA+AGG	0.672061	8.1:-21353511	MS.gene62834:CDS
GGTTTGACTCCATCTCAGAT+CGG	0.677869	8.1:-21354275	MS.gene62834:CDS
TCTTGTAATAGCGAGCAAGA+CGG	0.689009	8.1:+21353442	None:intergenic
ACTTGCACCGGAAATTCCTG+AGG	0.709274	8.1:-21353574	MS.gene62834:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATACATAAAAGAAAAAAAAA+TGG	+	chr8.1:21354030-21354049	None:intergenic	10.0%
!!	CTATATATCTAATAATATAA+TGG	-	chr8.1:21354324-21354343	MS.gene62834:intron	10.0%
!!	ATCAATATGAATAAACAAAT+AGG	+	chr8.1:21353953-21353972	None:intergenic	15.0%
!!	TCAATATGAATAAACAAATA+GGG	+	chr8.1:21353952-21353971	None:intergenic	15.0%
!!	TTTATATTGAAATTCTATTC+TGG	-	chr8.1:21354392-21354411	MS.gene62834:intron	15.0%
!!!	GATTGATTTATTTGAATTAT+AGG	-	chr8.1:21353000-21353019	MS.gene62834:intron	15.0%
!!!	TTTTGAATTGTTTCAATTTT+TGG	-	chr8.1:21352834-21352853	MS.gene62834:intron	15.0%
!!	ACATTTAATACAATAGCATA+GGG	+	chr8.1:21354131-21354150	None:intergenic	20.0%
!!	AGATTATTTGATCTATTTGA+AGG	-	chr8.1:21354094-21354113	MS.gene62834:intron	20.0%
!!	ATATTATAAGCACTTATGAT+AGG	-	chr8.1:21353648-21353667	MS.gene62834:intron	20.0%
!!	ATTGACAAAAAAATGATGAT+GGG	+	chr8.1:21352954-21352973	None:intergenic	20.0%
!!	TGATTTATTTGAATTATAGG+TGG	-	chr8.1:21353003-21353022	MS.gene62834:intron	20.0%
!!	TTATGTGAATTTAGATAAAC+AGG	-	chr8.1:21353543-21353562	MS.gene62834:CDS	20.0%
!!!	ATTTGTGTCATTATAGATTA+TGG	-	chr8.1:21353194-21353213	MS.gene62834:intron	20.0%
!!!	GTTTTCAGTTTATTTACATA+TGG	-	chr8.1:21353318-21353337	MS.gene62834:intron	20.0%
!!!	TAGTAAATGAGATTTCTTTT+GGG	-	chr8.1:21353721-21353740	MS.gene62834:intron	20.0%
!!!	TAGTACTAGAAAAATGATTT+TGG	-	chr8.1:21354002-21354021	MS.gene62834:intron	20.0%
!!!	TATATAGCTTTTGTTGAAAA+TGG	+	chr8.1:21354311-21354330	None:intergenic	20.0%
!!!	TTTGTGTCATTATAGATTAT+GGG	-	chr8.1:21353195-21353214	MS.gene62834:intron	20.0%
!	AAAAATTACATCTTGTGTAG+AGG	+	chr8.1:21352925-21352944	None:intergenic	25.0%
!	ACTACCAAATAAGTACTTAT+GGG	+	chr8.1:21353235-21353254	None:intergenic	25.0%
!	ATTTAATACAATAGCATAGG+GGG	+	chr8.1:21354129-21354148	None:intergenic	25.0%
!	CACCAAAAAATACAAGATAT+TGG	+	chr8.1:21354533-21354552	None:intergenic	25.0%
!	CATTGACAAAAAAATGATGA+TGG	+	chr8.1:21352955-21352974	None:intergenic	25.0%
!	CATTTAATACAATAGCATAG+GGG	+	chr8.1:21354130-21354149	None:intergenic	25.0%
!	CTAAATTAAAACTAGAGCAT+AGG	+	chr8.1:21353676-21353695	None:intergenic	25.0%
!	CTTATGAAAACAGGTTATAT+TGG	-	chr8.1:21353571-21353590	MS.gene62834:CDS	25.0%
!	GAATGTTACATTTGATACTA+TGG	-	chr8.1:21354364-21354383	MS.gene62834:intron	25.0%
!	GACATTTAATACAATAGCAT+AGG	+	chr8.1:21354132-21354151	None:intergenic	25.0%
!	GTTGAATAAAACAAAGTTTC+AGG	-	chr8.1:21354241-21354260	MS.gene62834:CDS	25.0%
!	TACTACCAAATAAGTACTTA+TGG	+	chr8.1:21353236-21353255	None:intergenic	25.0%
!	TTAAATGTCAACCTATTTGA+AGG	-	chr8.1:21354143-21354162	MS.gene62834:intron	25.0%
!	TTATAGAAACAGTGTATTAC+AGG	-	chr8.1:21353520-21353539	MS.gene62834:CDS	25.0%
!!	AGTAAATGAGATTTCTTTTG+GGG	-	chr8.1:21353722-21353741	MS.gene62834:intron	25.0%
!!	CATTTTTCTACTCTTTCTAT+TGG	-	chr8.1:21354207-21354226	MS.gene62834:CDS	25.0%
!!	GTAGTAAATGAGATTTCTTT+TGG	-	chr8.1:21353720-21353739	MS.gene62834:intron	25.0%
!!!	TAGAATGTTATTGCTTTTGT+CGG	-	chr8.1:21354500-21354519	MS.gene62834:intron	25.0%
!!!	TCAATTTTTGGTTACAGTAA+GGG	-	chr8.1:21352846-21352865	MS.gene62834:intron	25.0%
!!!	TGCCAATATCTTGTATTTTT+TGG	-	chr8.1:21354528-21354547	MS.gene62834:intron	25.0%
!!!	TTCAATTTTTGGTTACAGTA+AGG	-	chr8.1:21352845-21352864	MS.gene62834:intron	25.0%
	AAGCACTTGTAAAACTGATT+AGG	-	chr8.1:21353436-21353455	MS.gene62834:CDS	30.0%
	AAGCACTTGTGAAATTGATT+AGG	-	chr8.1:21353492-21353511	MS.gene62834:CDS	30.0%
	ACTCAACAAATCCTTCAAAT+AGG	+	chr8.1:21354157-21354176	None:intergenic	30.0%
	AGAGACAAGTCATTAATATC+AGG	+	chr8.1:21354571-21354590	None:intergenic	30.0%
	ATGAAATTGCGATTGAGAAT+GGG	+	chr8.1:21352761-21352780	None:intergenic	30.0%
	ATTTGCAAGTTTGCAAAGAA+GGG	-	chr8.1:21353034-21353053	MS.gene62834:intron	30.0%
	GACAAAAGCAATAACATTCT+AGG	+	chr8.1:21354501-21354520	None:intergenic	30.0%
	TAACCTAAAATTCTAGCATC+AGG	+	chr8.1:21354464-21354483	None:intergenic	30.0%
	TATTTGCAAGTTTGCAAAGA+AGG	-	chr8.1:21353033-21353052	MS.gene62834:intron	30.0%
	TCACTTCACACATAAAAACA+TGG	+	chr8.1:21354074-21354093	None:intergenic	30.0%
	TTGACCCATAAGTACTTATT+TGG	-	chr8.1:21353228-21353247	MS.gene62834:intron	30.0%
	TTGTTGAAAATGGATATCCA+CGG	+	chr8.1:21354301-21354320	None:intergenic	30.0%
!!	AGTTTCAATTAGGAAGCATT+TGG	-	chr8.1:21353804-21353823	MS.gene62834:intron	30.0%
!!	TCATTTTTCTAGTACTACCA+CGG	+	chr8.1:21353999-21354018	None:intergenic	30.0%
	AAACTGCCTTCTTGATCAAA+TGG	+	chr8.1:21353789-21353808	None:intergenic	35.0%
	CAGGTATAGCTTATGAAAAC+AGG	-	chr8.1:21353562-21353581	MS.gene62834:CDS	35.0%
	GAGTAGAAAAATGTCTGACA+AGG	+	chr8.1:21354200-21354219	None:intergenic	35.0%
	GATGAAATTGCGATTGAGAA+TGG	+	chr8.1:21352762-21352781	None:intergenic	35.0%
	GCTCAAGTTAAGTTTATCAC+TGG	-	chr8.1:21353106-21353125	MS.gene62834:intron	35.0%
	GTTATTCTTAGGGATTCTCA+TGG	-	chr8.1:21353079-21353098	MS.gene62834:intron	35.0%
	TCAAGAAGGCAGTTTCAATT+AGG	-	chr8.1:21353794-21353813	MS.gene62834:intron	35.0%
	TCTGTACCATTTGATCAAGA+AGG	-	chr8.1:21353780-21353799	MS.gene62834:intron	35.0%
	TGAAATTGCGATTGAGAATG+GGG	+	chr8.1:21352760-21352779	None:intergenic	35.0%
	TTATTTACATATGGCGTGTG+TGG	-	chr8.1:21353327-21353346	MS.gene62834:intron	35.0%
!	TTGATTGTCAATGTGTTGCT+TGG	-	chr8.1:21353968-21353987	MS.gene62834:intron	35.0%
!!	ATGTTATTGCTTTTGTCGGT+TGG	-	chr8.1:21354504-21354523	MS.gene62834:intron	35.0%
!!	CATTTTTCTAGTACTACCAC+GGG	+	chr8.1:21353998-21354017	None:intergenic	35.0%
!!	TCAGATCGGTGTTATTCTTA+GGG	-	chr8.1:21353069-21353088	MS.gene62834:intron	35.0%
!!!	TTTCTTTTGGGGTTGATTGT+AGG	-	chr8.1:21353733-21353752	MS.gene62834:intron	35.0%
	ACTTGGAGTCCTTATCCTTT+CGG	+	chr8.1:21353837-21353856	None:intergenic	40.0%
	AGAATAACACCGATCTGAGA+TGG	+	chr8.1:21353067-21353086	None:intergenic	40.0%
	ATCAAATGGTACAGATCCTC+AGG	+	chr8.1:21353775-21353794	None:intergenic	40.0%
	CAAAATCCTTAGGATCCTCA+AGG	-	chr8.1:21353132-21353151	MS.gene62834:intron	40.0%
	CACAAGAATCAACCTGAACT+TGG	+	chr8.1:21353854-21353873	None:intergenic	40.0%
	CCTCTGCTTTACCATACAAA+AGG	-	chr8.1:21352877-21352896	MS.gene62834:intron	40.0%
	CTAAAATTCTAGCATCAGGC+AGG	+	chr8.1:21354460-21354479	None:intergenic	40.0%
	GCTCTCTTAATCAGTTTCAC+AGG	+	chr8.1:21353388-21353407	None:intergenic	40.0%
	TACAGATCCTCAGGAATTTC+CGG	+	chr8.1:21353766-21353785	None:intergenic	40.0%
	TCTTGTAATAGCGAGCAAGA+CGG	+	chr8.1:21353891-21353910	None:intergenic	40.0%
!	ACAAAGAAGCGCATCAAACA+AGG	+	chr8.1:21354420-21354439	None:intergenic	40.0%
!	CCTTTTGTATGGTAAAGCAG+AGG	+	chr8.1:21352880-21352899	None:intergenic	40.0%
!	CTGCCTGATGCTAGAATTTT+AGG	-	chr8.1:21354458-21354477	MS.gene62834:CDS	40.0%
!!	CAAGTTCAGGTTGATTCTTG+TGG	-	chr8.1:21353852-21353871	MS.gene62834:intron	40.0%
!!	CAATTAGGAAGCATTTGGAG+AGG	-	chr8.1:21353809-21353828	MS.gene62834:intron	40.0%
!!	CTCAGATCGGTGTTATTCTT+AGG	-	chr8.1:21353068-21353087	MS.gene62834:intron	40.0%
	ACTTACTACTTCCAGACTGG+TGG	+	chr8.1:21353928-21353947	None:intergenic	45.0%
	AGAACATACCATGAGCCTTG+AGG	+	chr8.1:21353150-21353169	None:intergenic	45.0%
	AGGATAAGGACTCCAAGTTC+AGG	-	chr8.1:21353839-21353858	MS.gene62834:intron	45.0%
	ATCAACAACTGCCAGCACTT+TGG	-	chr8.1:21354601-21354620	MS.gene62834:intron	45.0%
	CTTACTACTTCCAGACTGGT+GGG	+	chr8.1:21353927-21353946	None:intergenic	45.0%
	GGTACTTACTACTTCCAGAC+TGG	+	chr8.1:21353931-21353950	None:intergenic	45.0%
	GGTTTGACTCCATCTCAGAT+CGG	-	chr8.1:21353055-21353074	MS.gene62834:intron	45.0%
	GTTGATTGTAGGACTTGCAC+CGG	-	chr8.1:21353744-21353763	MS.gene62834:intron	45.0%
	TCACTGGCAGCAAAATCCTT+AGG	-	chr8.1:21353122-21353141	MS.gene62834:intron	45.0%
	TTGCGATTGAGAATGGGGAA+TGG	+	chr8.1:21352755-21352774	None:intergenic	45.0%
	ACAAAAGGTCTGCACCAGGA+TGG	-	chr8.1:21352892-21352911	MS.gene62834:intron	50.0%
	ACTTGCACCGGAAATTCCTG+AGG	-	chr8.1:21353756-21353775	MS.gene62834:intron	50.0%
	CATGAGCCTTGAGGATCCTA+AGG	+	chr8.1:21353141-21353160	None:intergenic	50.0%
	CCATACAAAAGGTCTGCACC+AGG	-	chr8.1:21352888-21352907	MS.gene62834:intron	50.0%
	CTTAGGATCCTCAAGGCTCA+TGG	-	chr8.1:21353139-21353158	MS.gene62834:intron	50.0%
	GCATTTGGAGAGGAACCGAA+AGG	-	chr8.1:21353819-21353838	MS.gene62834:intron	50.0%
	GGAGAGGAACCGAAAGGATA+AGG	-	chr8.1:21353825-21353844	MS.gene62834:intron	50.0%
	TGTAATAGCGAGCAAGACGG+TGG	+	chr8.1:21353888-21353907	None:intergenic	50.0%
	TGTCTTCGTGTTTGCTTCCG+TGG	-	chr8.1:21354281-21354300	MS.gene62834:CDS	50.0%
!	CCTGGTGCAGACCTTTTGTA+TGG	+	chr8.1:21352891-21352910	None:intergenic	50.0%
	ATGGGGCGTATGCATAGTGG+CGG	-	chr8.1:21352721-21352740	MS.gene62834:CDS	55.0%
	GTAGAGGTCTTGAGCCATCC+TGG	+	chr8.1:21352909-21352928	None:intergenic	55.0%
	TCTAGCATCAGGCAGGCATG+TGG	+	chr8.1:21354453-21354472	None:intergenic	55.0%
!!	TGTGTTGCTTGGTTTGCCCG+TGG	-	chr8.1:21353979-21353998	MS.gene62834:intron	55.0%
	CCAAGAAGCTCCCACCAGTC+TGG	-	chr8.1:21353914-21353933	MS.gene62834:intron	60.0%
	CCAGACTGGTGGGAGCTTCT+TGG	+	chr8.1:21353917-21353936	None:intergenic	60.0%
	TGGGGCGTATGCATAGTGGC+GGG	-	chr8.1:21352722-21352741	MS.gene62834:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.1	gene	21352721	21354631	21352721	ID=MS.gene62834
chr8.1	mRNA	21352721	21354631	21352721	ID=MS.gene62834.t1;Parent=MS.gene62834
chr8.1	exon	21354609	21354631	21354609	ID=MS.gene62834.t1.exon1;Parent=MS.gene62834.t1
chr8.1	CDS	21354609	21354631	21354609	ID=cds.MS.gene62834.t1;Parent=MS.gene62834.t1
chr8.1	exon	21354417	21354489	21354417	ID=MS.gene62834.t1.exon2;Parent=MS.gene62834.t1
chr8.1	CDS	21354417	21354489	21354417	ID=cds.MS.gene62834.t1;Parent=MS.gene62834.t1
chr8.1	exon	21354192	21354330	21354192	ID=MS.gene62834.t1.exon3;Parent=MS.gene62834.t1
chr8.1	CDS	21354192	21354330	21354192	ID=cds.MS.gene62834.t1;Parent=MS.gene62834.t1
chr8.1	exon	21353411	21353597	21353411	ID=MS.gene62834.t1.exon4;Parent=MS.gene62834.t1
chr8.1	CDS	21353411	21353597	21353411	ID=cds.MS.gene62834.t1;Parent=MS.gene62834.t1
chr8.1	exon	21352721	21352754	21352721	ID=MS.gene62834.t1.exon5;Parent=MS.gene62834.t1
chr8.1	CDS	21352721	21352754	21352721	ID=cds.MS.gene62834.t1;Parent=MS.gene62834.t1

Gene Sequence

>MS.gene62834

ATGGGGCGTATGCATAGTGGCGGGTTCGTTTCCATTCCCCATTCTCAATCGCAATTTCATCTATTTTTTCAATCAATTTCGTTTTCTTCGTTCAAAAATCAATGTTTTTTTTGTTTTGAATTGTTTCAATTTTTGGTTACAGTAAGGGTATTTCATCCTCTGCTTTACCATACAAAAGGTCTGCACCAGGATGGCTCAAGACCTCTACACAAGATGTAATTTTTCTCTTACCCATCATCATTTTTTTGTCAATGTTCTGTTGTTGTTATGTTATTAATTGATTGATTTATTTGAATTATAGGTGGAAGAGACTATTTGCAAGTTTGCAAAGAAGGGTTTGACTCCATCTCAGATCGGTGTTATTCTTAGGGATTCTCATGGAATTGCTCAAGTTAAGTTTATCACTGGCAGCAAAATCCTTAGGATCCTCAAGGCTCATGGTATGTTCTTTTCTGTTTGTAATTGTTATTAGAATTTGTGTCATTATAGATTATGGGCATGTTTGAATTGACCCATAAGTACTTATTTGGTAGTATAAGCATTTGTGAGACTGATTGAGAGAGCTTATTGAAACAGTGTATGACATTTGCATAAGTTGTTTTCAGTTTATTTACATATGGCGTGTGTGGATTGTCTTATTTGTACTTATTTAGTAGCATAAGCGCCTGTGAAACTGATTAAGAGAGCTTATAGAAACAGTGTATGACATTTACATAAGCACTTGTAAAACTGATTAGGAGAGCTTATAGAAACAATGTATCACATTAGCACAAGCACTTGTGAAATTGATTAGGAGAGCTTATAGAAACAGTGTATTACAGGTTATGTGAATTTAGATAAACAGGTATAGCTTATGAAAACAGGTTATATTGGTTATATTAAAGCATTTTGATTTATCTTATCTTTTGTTATTGAAATAGTTTATTTATATTATAAGCACTTATGATAGGAGCCTATGCTCTAGTTTTAATTTAGCTGTTTATATAAACATAGACATATGTAGTAAATGAGATTTCTTTTGGGGTTGATTGTAGGACTTGCACCGGAAATTCCTGAGGATCTGTACCATTTGATCAAGAAGGCAGTTTCAATTAGGAAGCATTTGGAGAGGAACCGAAAGGATAAGGACTCCAAGTTCAGGTTGATTCTTGTGGAGAGCAGAATCCACCGTCTTGCTCGCTATTACAAGAAGACCAAGAAGCTCCCACCAGTCTGGAAGTAGTAAGTACCCTATTTGTTTATTCATATTGATTGTCAATGTGTTGCTTGGTTTGCCCGTGGTAGTACTAGAAAAATGATTTTGGAGCCATTTTTTTTTCTTTTATGTATAAGTAATTTATTAGAATTTAACCATGTTTTTATGTGTGAAGTGAAGATTATTTGATCTATTTGAAGGATTTGTTTTCCCCCTATGCTATTGTATTAAATGTCAACCTATTTGAAGGATTTGTTGAGTTACAAATTTTACGCTTTGCACCTTGTCAGACATTTTTCTACTCTTTCTATTGGATGCATTTATAGTTGAATAAAACAAAGTTTCAGGAGCAGAACAATTAGTTATGTCTTCGTGTTTGCTTCCGTGGATATCCATTTTCAACAAAAGCTATATATCTAATAATATAATGGTTACGATTTATTATTATGAATGTTACATTTGATACTATGGTATTATTTATATTGAAATTCTATTCTGGTTCCTTGTTTGATGCGCTTCTTTGTTTTCTGTGCGCCACATGCCTGCCTGATGCTAGAATTTTAGGTTATGTTCTAATTTGATCCTAGAATGTTATTGCTTTTGTCGGTTGGATGCCAATATCTTGTATTTTTTGGTGCAAACTCTAATGTATCCTGATATTAATGACTTGTCTCTCTTGCAGCGAATCAACAACTGCCAGCACTTTGGTTGCTTAG

Protein sequence

>MS.gene62834.t1

MGRMHSGGKGISSSALPYKRSAPGWLKTSTQDVEETICKFAKKGLTPSQIGVILRDSHGIAQVKFITGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA