AlfalfaGEDB | MS.gene52775

M. sativa cultivar XinJiangDaYe / MS.gene52775

KEGG: K14799
GO: GO:0005575 GO:0005634 GO:0008150 GO:0022613 GO:0042254 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044085 GO:0071840 GO:0110165
PFAM: PF04950.15 PF08142.15

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene52775.t1	XP_013462264.1	96.5	793	16	1	1	781	1	793	0.00E+00	1497.3

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene52775.t1	Q5R434	37.5	800	441	19	3	771	7	778	4.6e-122	440.3

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene52775.t1	A0A072V2P5	96.5	793	16	1	1	781	1	793	0.0e+00	1497.3

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene058030	MS.gene52775	0.818905	1.54E-52	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene059422	MS.gene52775	PPI
MS.gene52775	MS.gene001986	PPI
MS.gene95472	MS.gene52775	PPI
MS.gene08205	MS.gene52775	PPI
MS.gene056257	MS.gene52775	PPI
MS.gene04128	MS.gene52775	PPI
MS.gene03006	MS.gene52775	PPI
MS.gene053381	MS.gene52775	PPI
MS.gene054186	MS.gene52775	PPI
MS.gene004705	MS.gene52775	PPI
MS.gene20681	MS.gene52775	PPI
MS.gene41916	MS.gene52775	PPI
MS.gene05721	MS.gene52775	PPI
MS.gene070323	MS.gene52775	PPI
MS.gene52775	MS.gene030418	PPI
MS.gene41329	MS.gene52775	PPI
MS.gene59369	MS.gene52775	PPI
MS.gene016898	MS.gene52775	PPI
MS.gene037324	MS.gene52775	PPI
MS.gene51868	MS.gene52775	PPI
MS.gene08073	MS.gene52775	PPI
MS.gene52775	MS.gene048789	PPI
MS.gene028153	MS.gene52775	PPI
MS.gene99744	MS.gene52775	PPI
MS.gene53720	MS.gene52775	PPI
MS.gene52775	MS.gene83444	PPI
MS.gene063568	MS.gene52775	PPI
MS.gene029242	MS.gene52775	PPI
MS.gene29719	MS.gene52775	PPI
MS.gene37608	MS.gene52775	PPI
MS.gene004704	MS.gene52775	PPI
MS.gene32092	MS.gene52775	PPI
MS.gene51111	MS.gene52775	PPI
MS.gene52775	MS.gene32091	PPI
MS.gene72768	MS.gene52775	PPI
MS.gene52775	MS.gene95471	PPI
MS.gene82426	MS.gene52775	PPI
MS.gene65479	MS.gene52775	PPI
MS.gene52775	MS.gene067809	PPI
MS.gene39781	MS.gene52775	PPI
MS.gene40019	MS.gene52775	PPI
MS.gene98889	MS.gene52775	PPI
MS.gene07159	MS.gene52775	PPI
MS.gene063209	MS.gene52775	PPI
MS.gene20679	MS.gene52775	PPI
MS.gene40020	MS.gene52775	PPI
MS.gene04368	MS.gene52775	PPI
MS.gene52775	MS.gene47032	PPI
MS.gene53789	MS.gene52775	PPI
MS.gene94183	MS.gene52775	PPI
MS.gene029825	MS.gene52775	PPI
MS.gene52775	MS.gene005653	PPI
MS.gene037902	MS.gene52775	PPI
MS.gene72163	MS.gene52775	PPI
MS.gene43350	MS.gene52775	PPI
MS.gene75013	MS.gene52775	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene52775.t1	MTR_3g115250	96.469	793	16	1	1	781	1	793	0.0	1575
MS.gene52775.t1	MTR_7g029115	69.946	742	148	9	56	778	1	686	0.0	984

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene52775.t1	AT1G42440	65.195	793	261	5	1	779	1	792	0.0	1061

Find 177 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATTATCAAACTCATAAATTT+TGG	0.146199	3.1:+91208585	None:intergenic
ATTCACAAAACCTCTGTTAA+AGG	0.169380	3.1:-91213808	MS.gene52775:intron
AACTATCTGTCCTTCATTTC+AGG	0.183357	3.1:-91208369	MS.gene52775:intron
GTCAATGCCTTTCTGTATTT+AGG	0.217493	3.1:-91212425	MS.gene52775:CDS
TTTGTTCAGGTTCATGTATC+AGG	0.277316	3.1:-91211686	MS.gene52775:intron
CGCTTAAGGATTATCCTATC+TGG	0.301245	3.1:+91207940	None:intergenic
TAACTCTTCCTTGGATTTGA+TGG	0.308367	3.1:+91208191	None:intergenic
TTTCTTGAATTCAAAGGAAA+TGG	0.310959	3.1:+91211620	None:intergenic
GATGAAGTAGATGGGTTTCC+AGG	0.319944	3.1:-91210313	MS.gene52775:CDS
CTTTCTGTATTTAGGTCTCT+TGG	0.321593	3.1:-91212417	MS.gene52775:CDS
TCGACTTCAGAGAAATAAAA+TGG	0.331413	3.1:-91213622	MS.gene52775:intron
CAATTAAGTGTCTTCTCAAC+GGG	0.331541	3.1:-91206428	MS.gene52775:CDS
GTGCAAAATTGAGGTTCTTA+AGG	0.338028	3.1:-91211645	MS.gene52775:CDS
AAAAGGCCACATGTTGTAAT+CGG	0.338518	3.1:+91208406	None:intergenic
CATCCTCTCTAACTCTCTTT+AGG	0.340352	3.1:+91208007	None:intergenic
ATAATCCAGAGGATGTTAAA+TGG	0.346023	3.1:-91207481	MS.gene52775:CDS
GAATCTTCTGCGGTGCGGTC+AGG	0.349242	3.1:-91213021	MS.gene52775:CDS
ATGAAATATTAACTCTTCCT+TGG	0.358498	3.1:+91208182	None:intergenic
TCTTGCTAAAGCTTTAGAAT+TGG	0.375060	3.1:-91208539	MS.gene52775:CDS
TTGAACCATTTAACATCCTC+TGG	0.377883	3.1:+91207476	None:intergenic
GGAAGAGGAGGAAATGAAAT+TGG	0.381099	3.1:+91208039	None:intergenic
TGCCGGCACTTCAGAATATC+AGG	0.386971	3.1:-91210558	MS.gene52775:intron
GATTCTTGATTGTCAGGATC+TGG	0.387784	3.1:+91211043	None:intergenic
ACTAAAGATTCTTGATTGTC+AGG	0.389261	3.1:+91211037	None:intergenic
GTTGTAGGTTGCTGATCTAC+TGG	0.391585	3.1:-91212514	MS.gene52775:intron
TCTTACTTCACCGATTCATT+TGG	0.393122	3.1:-91212450	MS.gene52775:CDS
ACAGGGGACTCAAGTCCTTC+AGG	0.396817	3.1:-91208735	MS.gene52775:CDS
ACTCTCTTTAGGACTATTGT+AGG	0.403962	3.1:+91208018	None:intergenic
AATCACGCGAGGAGGACATT+TGG	0.407524	3.1:+91213463	None:intergenic
AAGAGTTAATATTTCATGTT+GGG	0.407651	3.1:-91208176	MS.gene52775:intron
TGCTCTCCAGCAAGAGGATC+AGG	0.407999	3.1:+91211001	None:intergenic
TGCGATTACCAGTTGATTCA+CGG	0.409640	3.1:+91211762	None:intergenic
AATGACGGGTCGGCCACTTC+GGG	0.410035	3.1:+91206355	None:intergenic
CCTACTATCCTGCATGGAAA+TGG	0.428337	3.1:-91212632	MS.gene52775:CDS
GAAGATACAAGATGAACTTA+AGG	0.430075	3.1:-91209146	MS.gene52775:CDS
AAAGGCCACATGTTGTAATC+GGG	0.432239	3.1:+91208407	None:intergenic
AGTCCTTCAGGACTTCTTCA+TGG	0.433581	3.1:-91208723	MS.gene52775:CDS
AACTCTTCCTTGGATTTGAT+GGG	0.435274	3.1:+91208192	None:intergenic
AATACACCTGATCCTCTTGC+TGG	0.436387	3.1:-91211007	MS.gene52775:CDS
TTTGCAAACCGCTTCCTAGC+TGG	0.439369	3.1:+91208760	None:intergenic
CCATTTCCATGCAGGATAGT+AGG	0.442246	3.1:+91212632	None:intergenic
AGGGAAGCATCAAATCAATA+AGG	0.443579	3.1:-91213869	MS.gene52775:CDS
CTGTCAAAATAACACGCTTA+AGG	0.448236	3.1:+91207926	None:intergenic
TTTCCAACTGTGCAAAATTG+AGG	0.449112	3.1:-91211654	MS.gene52775:CDS
AAATGACGGGTCGGCCACTT+CGG	0.452153	3.1:+91206354	None:intergenic
TGGATAAAATTTACAGTCCT+CGG	0.454419	3.1:+91212179	None:intergenic
TAACCTCTCCGTGAATCAAC+TGG	0.462651	3.1:-91211770	MS.gene52775:intron
TTTGCTCTTTAAAGAGGGAC+AGG	0.469357	3.1:+91212011	None:intergenic
TCGCCCACGAAGACCACGTT+TGG	0.469644	3.1:+91207300	None:intergenic
TATACCAAACGTGGTCTTCG+TGG	0.470607	3.1:-91207304	MS.gene52775:CDS
GGAAGCGGTTTGCAAAATAC+AGG	0.472373	3.1:-91208753	MS.gene52775:CDS
TAAGCCTTTGCTCTTTAAAG+AGG	0.475551	3.1:+91212005	None:intergenic
TACTCATTTCCCTCTTGACC+TGG	0.477883	3.1:+91210295	None:intergenic
AATGGTGTATCCACTTCATC+AGG	0.477899	3.1:+91208790	None:intergenic
AACATACCGTGTGTACCAAC+AGG	0.482792	3.1:+91207268	None:intergenic
TACCTTAGCCATTTCCATGC+AGG	0.483045	3.1:+91212624	None:intergenic
AAGAGGATCAGGTGTATTCT+CGG	0.486750	3.1:+91211012	None:intergenic
AGATCGTCCTTTGTATCAGC+TGG	0.489015	3.1:+91212159	None:intergenic
ATATGCTAGGCTGCATATCA+AGG	0.493076	3.1:-91208479	MS.gene52775:CDS
TATATACACACCTGAAATGA+AGG	0.498018	3.1:+91208359	None:intergenic
TGATCCTCTTGCTGGAGAGC+AGG	0.499589	3.1:-91210999	MS.gene52775:intron
CGTTTGGTATAGAGCTCTAC+AGG	0.500904	3.1:+91207316	None:intergenic
CAATTGCCTCTTCTGAATAC+AGG	0.502229	3.1:-91212996	MS.gene52775:CDS
GAAGAGTTAATATTTCATGT+TGG	0.502923	3.1:-91208177	MS.gene52775:CDS
GTCCTTCAGGACTTCTTCAT+GGG	0.505346	3.1:-91208722	MS.gene52775:CDS
TGGTGTTGGATGAAGTAGAT+GGG	0.505680	3.1:-91210321	MS.gene52775:CDS
CAGGTTCATGTATCAGGTGC+AGG	0.506352	3.1:-91211680	MS.gene52775:CDS
AGCCTAGCATATGAGCCAAC+TGG	0.510335	3.1:+91208490	None:intergenic
AATCTTCTGCGGTGCGGTCA+GGG	0.510484	3.1:-91213020	MS.gene52775:CDS
GGATAAAATTTACAGTCCTC+GGG	0.510534	3.1:+91212180	None:intergenic
TTGATGCTTCCCTCCTCCCA+TGG	0.511308	3.1:+91213879	None:intergenic
TTTGCTATTTCAGCTTCCGT+TGG	0.516802	3.1:+91210629	None:intergenic
TAAATCCACAGTAGCACAAA+GGG	0.517278	3.1:+91213083	None:intergenic
ATGGAGAGGTTTCTCCATGC+TGG	0.517625	3.1:-91208090	MS.gene52775:CDS
AGAGGATGTTAAATGGTTCA+AGG	0.518162	3.1:-91207474	MS.gene52775:intron
AAAGGCTTAAAACTCCTCAT+TGG	0.520870	3.1:-91211991	MS.gene52775:CDS
TGAAAACCGTTGATCCAGAT+AGG	0.524381	3.1:-91207954	MS.gene52775:CDS
ATCTAATAAAGGAAAATGAC+GGG	0.525110	3.1:+91206341	None:intergenic
CAATGAAGATGATGATGGTA+TGG	0.528365	3.1:-91210341	MS.gene52775:CDS
GCATTGACTTCCAAATGAAT+CGG	0.531196	3.1:+91212440	None:intergenic
TCAATCATCACCATGGGAGG+AGG	0.532809	3.1:-91213889	None:intergenic
ATGGTGTTGGATGAAGTAGA+TGG	0.532968	3.1:-91210322	MS.gene52775:CDS
AGTAAGATGTACCGTTACTC+TGG	0.533325	3.1:+91212972	None:intergenic
TTTAGGACTATTGTAGGAAG+AGG	0.534660	3.1:+91208024	None:intergenic
AACAGCAGCCACTGCTGGTG+TGG	0.536206	3.1:+91207984	None:intergenic
TTCCAGTTGGCTCATATGCT+AGG	0.538547	3.1:-91208492	MS.gene52775:CDS
AGATGATGATGGTATGGTGT+TGG	0.539111	3.1:-91210335	MS.gene52775:CDS
CGAATAAAGACAGCAGTGCT+TGG	0.542983	3.1:+91212390	None:intergenic
AATCTAATAAAGGAAAATGA+CGG	0.546362	3.1:+91206340	None:intergenic
TTCCTAGCTGGAACATCCAA+TGG	0.546547	3.1:+91208772	None:intergenic
AAGCCTTTGCTCTTTAAAGA+GGG	0.548670	3.1:+91212006	None:intergenic
TGTCCCTCTTTAAAGAGCAA+AGG	0.550901	3.1:-91212009	MS.gene52775:CDS
TGGATGTTCCAGCTAGGAAG+CGG	0.553467	3.1:-91208768	MS.gene52775:CDS
TACCTGATATTCTGAAGTGC+CGG	0.557584	3.1:+91210556	None:intergenic
TGATATTCTGAAGTGCCGGC+AGG	0.559210	3.1:+91210560	None:intergenic
TATTTAGATCACGATGGCGA+TGG	0.561928	3.1:-91210274	MS.gene52775:CDS
AGAAGCACATGCTGCAGATG+AGG	0.564536	3.1:-91209116	MS.gene52775:CDS
ACACCAGCAGTGGCTGCTGT+TGG	0.565022	3.1:-91207982	MS.gene52775:CDS
AGGAAGTAGATAACATGACT+AGG	0.565206	3.1:-91209171	MS.gene52775:CDS
CAGGTCGACACGGTATATGA+TGG	0.565557	3.1:-91211841	MS.gene52775:CDS
TTAAACGTGCATACCCGAAG+TGG	0.566938	3.1:-91206368	MS.gene52775:CDS
ATCCTGCATGGAAATGGCTA+AGG	0.567897	3.1:-91212626	MS.gene52775:intron
GAACCAACAGCAGCCACTGC+TGG	0.569329	3.1:+91207979	None:intergenic
AGGACTATTGTAGGAAGAGG+AGG	0.571987	3.1:+91208027	None:intergenic
CAAGAGACCTAAATACAGAA+AGG	0.576022	3.1:+91212418	None:intergenic
TGATGAAGTGGATACACCAT+TGG	0.577749	3.1:-91208788	MS.gene52775:CDS
ATACCAAACGTGGTCTTCGT+GGG	0.578191	3.1:-91207303	MS.gene52775:CDS
TGACAATGATTCAGTGATGA+TGG	0.580300	3.1:-91210215	MS.gene52775:intron
AGAAAGAGGAAGCTTCCTGC+CGG	0.580799	3.1:-91210575	MS.gene52775:CDS
TGACTCTGATGACGAGGAGT+CGG	0.581992	3.1:-91210371	MS.gene52775:CDS
GATTATCCTATCTGGATCAA+CGG	0.583547	3.1:+91207948	None:intergenic
GCAATTAAGTGTCTTCTCAA+CGG	0.585539	3.1:-91206429	MS.gene52775:CDS
GGAAGTAGATAACATGACTA+GGG	0.586770	3.1:-91209170	MS.gene52775:CDS
CAATCATCACCATGGGAGGA+GGG	0.588445	3.1:-91213888	None:intergenic
TGATGCACCCATCAAATCCA+AGG	0.589101	3.1:-91208199	MS.gene52775:CDS
GAAGAACGAACCTTTAACAG+AGG	0.589133	3.1:+91213798	None:intergenic
AGATGGGTTTCCAGGTCAAG+AGG	0.591240	3.1:-91210305	MS.gene52775:CDS
GAAGCACATGCTGCAGATGA+GGG	0.593148	3.1:-91209115	MS.gene52775:intron
TCTACCTGCTCTCCAGCAAG+AGG	0.594437	3.1:+91210995	None:intergenic
AGTCCTAAAGAGAGTTAGAG+AGG	0.596044	3.1:-91208010	MS.gene52775:CDS
ACAGTCCTCGGGAAATTCAG+AGG	0.597157	3.1:+91212191	None:intergenic
AATGACCGCAATATTGGCAA+AGG	0.600026	3.1:-91213657	MS.gene52775:CDS
CCCTAAATTACAGGTCGACA+CGG	0.600237	3.1:-91211851	MS.gene52775:intron
ATCTTACCTCATGGCTAACA+AGG	0.601088	3.1:-91211957	MS.gene52775:intron
TCTGGTCCTGTATTCAGAAG+AGG	0.604211	3.1:+91212990	None:intergenic
CAATCAATCATCACCATGGG+AGG	0.605426	3.1:-91213892	None:intergenic
AAACACAGACAAGAACAAGA+TGG	0.607069	3.1:-91208109	MS.gene52775:CDS
AACGGAAGCTGAAATAGCAA+AGG	0.610424	3.1:-91210627	MS.gene52775:CDS
AACTCAACGATCTTACCTCA+TGG	0.611394	3.1:-91211966	MS.gene52775:CDS
GATGGAGCTTCACTAAGACT+TGG	0.614741	3.1:-91210256	MS.gene52775:CDS
GTCAAAAGATCATCTGCAAG+TGG	0.617065	3.1:+91213057	None:intergenic
ATCCCATGAAGAAGTCCTGA+AGG	0.620725	3.1:+91208720	None:intergenic
AGAGGATGCCACACCAGCAG+TGG	0.621106	3.1:-91207992	MS.gene52775:CDS
GAAGCGGTTTGCAAAATACA+GGG	0.623219	3.1:-91208752	MS.gene52775:CDS
GAAGGTAACCGCTGAGAACG+AGG	0.626118	3.1:+91211800	None:intergenic
TGGTGACCTACTATCCTGCA+TGG	0.628570	3.1:-91212638	MS.gene52775:CDS
GATGGGTTTCCAGGTCAAGA+GGG	0.631294	3.1:-91210304	MS.gene52775:CDS
TGTAGAGTATCCTGATGAAG+TGG	0.631648	3.1:-91208800	MS.gene52775:intron
TTACCAGTTGATTCACGGAG+AGG	0.634966	3.1:+91211767	None:intergenic
AATAAAGGAAAATGACGGGT+CGG	0.635423	3.1:+91206345	None:intergenic
AGAGAGGACTGTGTTCCAGT+TGG	0.636400	3.1:-91208505	MS.gene52775:CDS
GAGCACCTTTGCCAATATTG+CGG	0.638112	3.1:+91213652	None:intergenic
TTGTTGCCAGACATGGCCAA+CGG	0.638255	3.1:-91210645	MS.gene52775:intron
TCTTGCCTCTGAATTTCCCG+AGG	0.638569	3.1:-91212196	MS.gene52775:CDS
CAACTGAAAAGCGTCCAGCA+TGG	0.638608	3.1:+91208076	None:intergenic
TTCAAACCTTGTTAGCCATG+AGG	0.642327	3.1:+91211951	None:intergenic
CTAAATCCACAGTAGCACAA+AGG	0.644222	3.1:+91213082	None:intergenic
TTCAGATGAAGTGCATGATG+TGG	0.644636	3.1:-91211579	MS.gene52775:CDS
AAAGAACCTGTTGGTACACA+CGG	0.646711	3.1:-91207274	MS.gene52775:intron
CAGACAAGAACAAGATGGAG+AGG	0.647406	3.1:-91208104	MS.gene52775:CDS
CACCATTGGATGTTCCAGCT+AGG	0.649403	3.1:-91208774	MS.gene52775:CDS
GATCGTTGAGTTCTCCAATG+AGG	0.650248	3.1:+91211977	None:intergenic
GGGCGAATTAAAGAACCTGT+TGG	0.652133	3.1:-91207283	MS.gene52775:CDS
TGAATACAGGACCAGAGTAA+CGG	0.652860	3.1:-91212983	MS.gene52775:intron
TGTGACAATGAAGATGATGA+TGG	0.653424	3.1:-91210346	MS.gene52775:CDS
AAGGCCACATGTTGTAATCG+GGG	0.656159	3.1:+91208408	None:intergenic
ACAACCCCGATTACAACATG+TGG	0.659265	3.1:-91208412	MS.gene52775:CDS
TTTATTTCTCTGAAGTCGAG+CGG	0.660431	3.1:+91213626	None:intergenic
CAGGTACTAAAAGCACCTCA+TGG	0.661304	3.1:-91212658	MS.gene52775:CDS
GTTATCTAAAGAATCTTCTG+CGG	0.661401	3.1:-91213031	MS.gene52775:CDS
AGATGAAGTGCATGATGTGG+AGG	0.666002	3.1:-91211576	MS.gene52775:intron
CTAAAGAATCTTCTGCGGTG+CGG	0.670106	3.1:-91213026	MS.gene52775:CDS
TACAAAGGACGATCTTCACA+AGG	0.679750	3.1:-91212151	MS.gene52775:intron
TTACTCACAATCACGCGAGG+AGG	0.685766	3.1:+91213455	None:intergenic
AAGGTAACCGCTGAGAACGA+GGG	0.686769	3.1:+91211801	None:intergenic
TTCATACGAAGACCTTGCAG+AGG	0.693755	3.1:+91212482	None:intergenic
CGGAGAGGTTACGAGCACGA+AGG	0.696764	3.1:+91211782	None:intergenic
ACACATGTTCTATAATCCAG+AGG	0.697379	3.1:-91207492	MS.gene52775:CDS
AATTTACTCACAATCACGCG+AGG	0.710656	3.1:+91213452	None:intergenic
AATGAGTATTTAGATCACGA+TGG	0.713624	3.1:-91210280	MS.gene52775:CDS
AAGCGGTTTGCAAAATACAG+GGG	0.725642	3.1:-91208751	MS.gene52775:CDS
AGATGCACCCTCGTTCTCAG+CGG	0.727564	3.1:-91211808	MS.gene52775:CDS
GTAGAGCTCTATACCAAACG+TGG	0.732540	3.1:-91207313	MS.gene52775:CDS
TGTTGATGACTCTGATGACG+AGG	0.734881	3.1:-91210377	MS.gene52775:CDS
CAGGATAGTAGGTCACCATG+AGG	0.742498	3.1:+91212643	None:intergenic
AATTAAGTGTCTTCTCAACG+GGG	0.760621	3.1:-91206427	MS.gene52775:CDS
TATCAAGGAAGTGCCCAGTG+CGG	0.762764	3.1:-91208464	MS.gene52775:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
chr3.1	gene	91206335	91213899	91206335	ID=MS.gene52775
chr3.1	mRNA	91206335	91213899	91206335	ID=MS.gene52775.t1;Parent=MS.gene52775
chr3.1	exon	91213809	91213899	91213809	ID=MS.gene52775.t1.exon1;Parent=MS.gene52775.t1
chr3.1	CDS	91213809	91213899	91213809	ID=cds.MS.gene52775.t1;Parent=MS.gene52775.t1
chr3.1	exon	91213623	91213699	91213623	ID=MS.gene52775.t1.exon2;Parent=MS.gene52775.t1
chr3.1	CDS	91213623	91213699	91213623	ID=cds.MS.gene52775.t1;Parent=MS.gene52775.t1
chr3.1	exon	91213463	91213540	91213463	ID=MS.gene52775.t1.exon3;Parent=MS.gene52775.t1
chr3.1	CDS	91213463	91213540	91213463	ID=cds.MS.gene52775.t1;Parent=MS.gene52775.t1
chr3.1	exon	91212984	91213115	91212984	ID=MS.gene52775.t1.exon4;Parent=MS.gene52775.t1
chr3.1	CDS	91212984	91213115	91212984	ID=cds.MS.gene52775.t1;Parent=MS.gene52775.t1
chr3.1	exon	91212627	91212677	91212627	ID=MS.gene52775.t1.exon5;Parent=MS.gene52775.t1
chr3.1	CDS	91212627	91212677	91212627	ID=cds.MS.gene52775.t1;Parent=MS.gene52775.t1
chr3.1	exon	91212389	91212529	91212389	ID=MS.gene52775.t1.exon6;Parent=MS.gene52775.t1
chr3.1	CDS	91212389	91212529	91212389	ID=cds.MS.gene52775.t1;Parent=MS.gene52775.t1
chr3.1	exon	91212152	91212274	91212152	ID=MS.gene52775.t1.exon7;Parent=MS.gene52775.t1
chr3.1	CDS	91212152	91212274	91212152	ID=cds.MS.gene52775.t1;Parent=MS.gene52775.t1
chr3.1	exon	91211958	91212035	91211958	ID=MS.gene52775.t1.exon8;Parent=MS.gene52775.t1
chr3.1	CDS	91211958	91212035	91211958	ID=cds.MS.gene52775.t1;Parent=MS.gene52775.t1
chr3.1	exon	91211771	91211860	91211771	ID=MS.gene52775.t1.exon9;Parent=MS.gene52775.t1
chr3.1	CDS	91211771	91211860	91211771	ID=cds.MS.gene52775.t1;Parent=MS.gene52775.t1
chr3.1	exon	91211577	91211699	91211577	ID=MS.gene52775.t1.exon10;Parent=MS.gene52775.t1
chr3.1	CDS	91211577	91211699	91211577	ID=cds.MS.gene52775.t1;Parent=MS.gene52775.t1
chr3.1	exon	91211000	91211083	91211000	ID=MS.gene52775.t1.exon11;Parent=MS.gene52775.t1
chr3.1	CDS	91211000	91211083	91211000	ID=cds.MS.gene52775.t1;Parent=MS.gene52775.t1
chr3.1	exon	91210559	91210657	91210559	ID=MS.gene52775.t1.exon12;Parent=MS.gene52775.t1
chr3.1	CDS	91210559	91210657	91210559	ID=cds.MS.gene52775.t1;Parent=MS.gene52775.t1
chr3.1	exon	91210216	91210410	91210216	ID=MS.gene52775.t1.exon13;Parent=MS.gene52775.t1
chr3.1	CDS	91210216	91210410	91210216	ID=cds.MS.gene52775.t1;Parent=MS.gene52775.t1
chr3.1	exon	91209116	91209191	91209116	ID=MS.gene52775.t1.exon14;Parent=MS.gene52775.t1
chr3.1	CDS	91209116	91209191	91209116	ID=cds.MS.gene52775.t1;Parent=MS.gene52775.t1
chr3.1	exon	91208714	91208817	91208714	ID=MS.gene52775.t1.exon15;Parent=MS.gene52775.t1
chr3.1	CDS	91208714	91208817	91208714	ID=cds.MS.gene52775.t1;Parent=MS.gene52775.t1
chr3.1	exon	91208370	91208629	91208370	ID=MS.gene52775.t1.exon16;Parent=MS.gene52775.t1
chr3.1	CDS	91208370	91208629	91208370	ID=cds.MS.gene52775.t1;Parent=MS.gene52775.t1
chr3.1	exon	91208177	91208242	91208177	ID=MS.gene52775.t1.exon17;Parent=MS.gene52775.t1
chr3.1	CDS	91208177	91208242	91208177	ID=cds.MS.gene52775.t1;Parent=MS.gene52775.t1
chr3.1	exon	91207925	91208140	91207925	ID=MS.gene52775.t1.exon18;Parent=MS.gene52775.t1
chr3.1	CDS	91207925	91208140	91207925	ID=cds.MS.gene52775.t1;Parent=MS.gene52775.t1
chr3.1	exon	91207475	91207553	91207475	ID=MS.gene52775.t1.exon19;Parent=MS.gene52775.t1
chr3.1	CDS	91207475	91207553	91207475	ID=cds.MS.gene52775.t1;Parent=MS.gene52775.t1
chr3.1	exon	91207275	91207338	91207275	ID=MS.gene52775.t1.exon20;Parent=MS.gene52775.t1
chr3.1	CDS	91207275	91207338	91207275	ID=cds.MS.gene52775.t1;Parent=MS.gene52775.t1
chr3.1	exon	91206335	91206453	91206335	ID=MS.gene52775.t1.exon21;Parent=MS.gene52775.t1
chr3.1	CDS	91206335	91206453	91206335	ID=cds.MS.gene52775.t1;Parent=MS.gene52775.t1

Gene Sequence

>MS.gene52775

ATGGGAGGAGGGAAGCATCAAATCAATAAGGCTCACAAGTCACGCTTCTCTTCTAAGTCTTCTCGCAACATTCACAAAACCTCTGTTAAAGGTTCGTTCTTCGTATTTTCAACATATCAAATGCTTTTTTCAATTTTTATAAATTTTTACATTTATAATTAATGTTTAGTTTTTGAATTGAATTGAATTGAATTGTTTAGATAGACTTGCAATCGTAAAAAATGACCGCAATATTGGCAAAGGTGCTCGTGCCGCTCGACTTCAGAGAAATAAAATGGTATTTTTTAATCTGTTTCAATGTTGCTGTTGTTTCTTTTCATTATATTTGCTTTCAGAATCATTGATTTGTAAATTTACAGATACGTGAGCAAAAAAAGGCTGCAGTCTTGAAAGAAAAAAGAGAATTGACTGGATCCAAATGTCCTCCTCGCGTGATTGTGAGTAAATTCATCCTCTCATTTCGATATGAATGCACTGTTTGGATAAACAGCTTAATTAAGCACTCCTATATAATTTTTTGCAACATAATACGGAACTAAGTATTTTTTTTAAGCTATAAGCTGATTTCATAAGCTATCCTAGAGAGCTGTTGGAAATAAACTTAAAACAGCTTATGTGCATGTGTTAAGCTGTTTCTACAAGTTTTCAAACAGGTTCACAAGTGTTTATGCTAGTAGATAAACTCATATAAGCCAATCCGAATAGGCCCTTATTCATCACATACTCATTTTGAATTCACTTTTGCTGCACCCTCACATCCTTATTATTTTTTTGTTCCTTCCAGGTTCTTTTTGCCCTTTGTGCTACTGTGGATTTAGAACCACTTGCAGATGATCTTTTGACGTTGTTATCTAAAGAATCTTCTGCGGTGCGGTCAGGGACAATTGCCTCTTCTGAATACAGGACCAGAGTAACGGTACATCTTACTGCTGCCTTATTCTCTCAAAATTAGTTAATTTGTGGAGTCGTTTGTATATACAACATCGATTGAGTTAATTGCTACGATTTTTTTATTTTATGTATAATACTTAATAATAATTGTAATGATCTCAAGCTATGAATTTAGAATTCATAGTATAGACATGAACTTGTTTATTGAGAAATTAGGCAGTGGTTGTACTTCAAACATATGTTCAATTTGTATTTAATTATGTTTTTTGAATAGTCATTTCCCATGTATGTTTTAATGTACGGGATTTTACAACAATGTTATACGCCACAGGTACTAAAAGCACCTCATGGTGACCTACTATCCTGCATGGAAATGGCTAAGGTATTATCTATTGCTTTTAGCTTTTTTCAAGGATTTTAGTTTGAGGGTGTGGAAAACTTGGGTATGTGCTTACTGTTCGACACTATTTGTGTTGTAGGTTGCTGATCTACTGGTTTTTGTGGCCTCTGCAAGGTCTTCGTATGAAGATACTGATTCTTACTTCACCGATTCATTTGGAAGTCAATGCCTTTCTGTATTTAGGTCTCTTGGTTTACCAAGCACTGCTGTCTTTATTCGTGTAAGTTATGGTCATTCTTATTTTTGGAACTTATGGATTTACACGAGCTTACAATCATTTCACGAAGGAATTGACATTTAATCATTTATGCGGACTTCCATGTAATGCTTTCAGGATCTGCCAACCGAGCTAAAACAAAGAAATGAACTAAAGAAGATCTGTACATCTAGTCTTGCCTCTGAATTTCCCGAGGACTGTAAATTTTATCCAGCTGATACAAAGGACGATCTTCACAAGGTAATTATTTCATTCATTCATGACGGAAAATTCCGATTCCACCTGCTGAATTTATCACCCCTTGTATGCCCAGTTTTTGCCTAAGCCTTACACTTTTCTCATCTTTGCAATCACAGTTCCTGTCCCTCTTTAAAGAGCAAAGGCTTAAAACTCCTCATTGGAGAACTCAACGATCTTACCTCATGGCTAACAAGGTTTGAATTCATTATTTTGATCCAGATGTTTATTGATTCTATCAATTTACATATAGTTTTGCATATGCTTATCATGTTTTACCACCCTAAATTACAGGTCGACACGGTATATGATGGCAATTCTGAAAGATGCACCCTCGTTCTCAGCGGTTACCTTCGTGCTCGTAACCTCTCCGTGAATCAACTGGTAATCGCAAGATCATGGAATACATTTTAGTTCCATTTAGTTGTTTGTTGTCTCACATTTTGTTTGTTCAGGTTCATGTATCAGGTGCAGGAGATTTCCAACTGTGCAAAATTGAGGTTCTTAAGGATCCATTTCCTTTGAATTCAAGAAAAAATCAGGACTTGATGGATTCAGATGAAGTGCATGATGTGGAGGTATAGAGTTTTATCTAGTTTTCAACTAGACTGGTTAGGAACTCTTAAAGGAAGTGGCTTTTAAGATTGAGGTTCAATCTGGTTTTGCACATATATTATGTAAATATATAGCTGTATGTTAAAATGTATAATATGTACATATTCAGAAGGTAAGTAAAATAATGGCAATTAATATTGAATAACAATTTCAATTGGTAAATACCGTTTGTTCAAAAAATTGGTAAATACCGTTTTTTGTCAATCTGAAAACACCAACTCAGGTCCCTCTTAATTTTGATATACTGAAATTCCAAACCTTCTGTTCATGCAACACTTGGACATTATGATTTTTTTCTTACTCATATACCGTGTCGACCTGTTCATGCAACACTGTACATTATGATCTCAAACCACTTGGACATTATGATCTTTTTATACTCATTTAATCTCAAACCATTTATTTATACTTACATATTTACTTTTGCCTCATTTTTCCTACCTTTTAATGTTGTAGGTCATTCGTACTCTAGTTCCAGATCCTGACAATCAAGAATCTTTAGTTGCCGAGAATACACCTGATCCTCTTGCTGGAGAGCAGGTAGAATAAATTCTCATTTCTACTATTGCCATTTGTAAAATGTTATATTTGATTTACGAGGTTCAGTACTCATAATTTCTTAATGGACGTCATTTTAATTGATCATTAGAGTATTTTATAATTTTATTTTTTATATTATAGAATGGCAGTACAAGCTATGATGATTGGCTTGTAATTCAATCAGATGTTGCCTATTATCTGACTTCGCTTCACTATTTTAAGCCTAGAATTGGCCCAGTGTTTAAACAAATTAGTGGGTGCATTATCTGAATACCATGTGTTTATTTATTTGCAAGATTCTTTTGTTTAACGTTCTGGTATGATATTATTACTTGTTGCCAGACATGGCCAACGGAAGCTGAAATAGCAAAGGCTGATGAAGATCAAAAGCAAAAAAAGATAAGAAAGAGGAAGCTTCCTGCCGGCACTTCAGAATATCAGGTATGCGCTTGTATTCTTGTTTCACTTCTGATTGTTTTTTGGTCACCCTTATTGTTTTCAATACTCTTATTTGTATATATATGTTTTGACATTTCTGCTCATGAAGTATCTAGTATGGAAATAATAGGTATCTGGTATTTATTTTCAGGCTGCTTGGATTGTTGATGACTCTGATGACGAGGAGTCGGACTGTGACAATGAAGATGATGATGGTATGGTGTTGGATGAAGTAGATGGGTTTCCAGGTCAAGAGGGAAATGAGTATTTAGATCACGATGGCGATGGAGCTTCACTAAGACTTGGAGATTCTGAAGATGAAACTGACAATGATTCAGTGATGATGGTGAGCTTGTTAATACTTTTGCAACTCTAAAATAGTTATCCTTTAGACCTTTGTCCTCGTTGGACAGTTTCTTGTCCTTTATTTTGTTCCTGGCATTTGAACACTGTAAGTATTGGTAAGTTCTACTTAGGCTTTGTTTGGTTGGAGGGGAGGGGAAGGAAAGGCTTTGGGGGGACAAAAATATAGGGGAATTTAAGAATATTATTACAACATATATTAAATTTGAAGAATTCATATAAACCCCCCCAAACCCCCAAAAACCCTCCTCCAATACAATTTTTTAGTTCCCCCAAATGAGGAGGGTTTTATATTTTGAAGAAAAATAAGCCCCCCTAAGCCCTTCCTCCCATATGTCTTCTGTTTCTTCCACCTACTCCTTCCTTTTTTTTCCAAACTCTTCCTTCCCTTCCCCTCCAAACTCGCAAACAAAGCCTTAATCGAATCTCGCGAATCCGGTATTATGGATATTCAATTATTTTTGCGAGTTTTGCATTTACAGTATTTCAAATATTTTAAGGACACATGTTTTAATAATCCCGTCCCATTGCGGGGTGTCTGATTACTTTTCTCCTAAATTATTGGAAGGTATTTCTTCTTTTAAATGCATGTTTGTGTTTGAGTTTGGGATTTAATTGGCGTTGGTGCAAGACTTTATAACTTGTACCATTGAAAAAGTTCTTATAGAAAAAGTGCTTTAGACAATACCAAATGTTCATTGTATAAATAATTACTGTTTAAAACTTAAATTGCATCTTCAGATTAATGTATTTTGAGGTTAATAAACTTTTGTTGGCCGCATACAGAGAGAAATTATGAAAAAAAGTTATTATATTGCCCAATATTTTTCAAACATGGTGGTTATTTTTGTTTACTTAAAAAGTATATTATCCATCACTTTTAAGACAGTCAGCTCTCTTGGTAAACAATGTTGGATTATCTTTTTGCCAGATTAATTTTGATTTCCTTGGTGTCAGTGGATCATGGTCCATACCTTTATTGCATGATCACTATTTTGGGATTACAGGAAGTAGATAACATGACTAGGGAGAAGATACAAGATGAACTTAAGGAACTTAAAGAAGCACATGCTGCAGATGAGGGTATTTTTTTTCTTTTATTGTCTTATCAGTTTTATCACTATATATATGCCACACTTGCCTCTTTTTCTATATATAATGGTCTGCTTTTTTGGTTGCTACTTTATATTTCATGTCCTGCCCTTGGCACTTTGTTGGGAATTTGACATAGATACCTTTTTTTGGATTTCCACCTTCGGGTTCCTACCTTTTGCCTTAGATGAGCAAGAATTGAGCCTTTATGGATGATTTGAAGTTGTATTGCTGGTATGATGATATTCTTATTGATTAGTTGCCTGCCATTTGTTTGTTGTTGGTGTAGAGTATCCTGATGAAGTGGATACACCATTGGATGTTCCAGCTAGGAAGCGGTTTGCAAAATACAGGGGACTCAAGTCCTTCAGGACTTCTTCATGGGATCCTAAAGTATGTTTGCCTTTTGGAGATTCTTTACAGCAATACATTGGTACTAAACAAGAAATAATAACCTGACATTTGTAATAATATCAGGAATCTCTACCTCAAGATTATGCCAAAATTTATGAGTTTGATAATTTTAAAAGACTACAAAAGCATGTTCTTGCTAAAGCTTTAGAATTGGAAAAAGAGAACAGAGAGGACTGTGTTCCAGTTGGCTCATATGCTAGGCTGCATATCAAGGAAGTGCCCAGTGCGGTTGCATCAAAATTATGTATAATTGCAAAGACAACCCCGATTACAACATGTGGCCTTTTGAAACACGAGTCAAAACTATCTGTCCTTCATTTCAGGTGTGTATATATGCTATATCATTTTACCATATTTGCTGTTTGTGCTTTTTAGTGCCCTCTCATCAAAAGTGGCTCTTTCTGAATATTTGAAAAATGTGTAATGAACAAAATCACTTGTGTTTTGTAGCGTGAAGAAGCATGAAACATATGATGCACCCATCAAATCCAAGGAAGAGTTAATATTTCATGTTGGGTTTCGGCAATTTGTTGGCAGACCAACTTTCTCTAGTGAGTTCATAAACACAGACAAGAACAAGATGGAGAGGTTTCTCCATGCTGGACGCTTTTCAGTTGCTTCAATTTATGCACCAATTTCATTTCCTCCTCTTCCTACAATAGTCCTAAAGAGAGTTAGAGAGGATGCCACACCAGCAGTGGCTGCTGTTGGTTCACTGAAAACCGTTGATCCAGATAGGATAATCCTTAAGCGTGTTATTTTGACAGGGTATGTTCATTTATTTTTGCCAAGGCCAAGATCCATCAACTGAAAACTTTTATATAATATTTCTTTATATCTCAATATTTTCTTAAGAGTATCTCAGTTTATCTCTTGGCATTAATTTCTATATTTATAAGTTGTAGACTATAGTCACGAGCTGTTTCCCCATTTATTCTTTTCTGAAACCCTATAATGTCAACAAAAAGCTTGCGTATTACTTATTGGTTCTATGGTCTTTTTGGTTGATGTCTTTGCATATCGAATTTGGGGGCAAAATGTAATTATTTTCATTTCAGAGTTGTTTGTGACATTCATGACAATCCACAACAAAATTACTGTCATGCTAATTAATAGTTTTTGAACATTTTGTGGTGCAGCTACCCCCAAAGAGTATCAAAACGTAAAGCTTCTGTGAGACACATGTTCTATAATCCAGAGGATGTTAAATGGTTCAAGGTAAGGAACAATTGTTGCCCAGTTTCTGAAATCATTAGATTTAATTTTGATGATTTGTAGAGTAATGAAAGAACTTGTGGAAATTATCCTCAATTATCACCCTAACATGGTTTCTTAATGTGGGTGGTGGTTGCAGCCTGTAGAGCTCTATACCAAACGTGGTCTTCGTGGGCGAATTAAAGAACCTGTTGGTACACACGGTATGTTATGTTGCAAACCCTTATTGCCAATCTTCTTACTATGAACTTTCAGGCAGATACTCATTTTAGGGAGAAACTGATTATTTTATTGCTTCATTAATGACGGGCTTGTTTGTTGTTGCATTCCATGAATCTCATCATGACTCATTTTTTTAATGTTATATTGTAATTTTCTTATCCTGGTAAAATCTTTGTTTCAAATGGATTTTGCTATGCCGTTGATTTGAATTTACCTCCTACCTCATGTTCTTGTTAAGACGAGTAGATCTGATAAATTACAATTATTAGATCTGCCCCATTATTCGATATTGATTGAAATGATTGTTTGCCATGGGAAATCTTCACTGTTGGAAACACAATTGTGCCCATTTATGATTTTTTTTTTTTTTTTTTTTATGCTTAGCTTCATAGCTTTTTGAAGATATATTATATTCTTCTGTGAAAGTTCTGCTGTAAGTACTGTCTAGTTCATTAGAATTATTACACATTGGGGTTTGATAAATATAAAAATGGTACTAATGAAAAGGATAGATGAAACGAGTGATAAGGTACTTATGAAAAGGATAGATGAGACGAGTGATAAAAGTAAAGGCCGGAAAATATTTTCCTTAGCATGCTGCGCGGGTTGATAAATATAAAAATTAATCTTACTGAACTATTGACAATCAATTAGTTGTTTATTATTTTGTTGACTAAATGTAAATTCCCCGTGTATGTTTTTTTGCAATTGTTTTTTGGTTCATGTTTCAGCTTGCTTGTAGTCATTAGCATTCTCAAATAAATGTAGGATACCTATTGATCGTATTCTGTTTATTGTTCAGGAGCAATTAAGTGTCTTCTCAACGGGGTTCTTGAACAGCGTGATACTGTATGTTTGAATTTATTTAAACGTGCATACCCGAAGTGGCCGACCCGTCATTTTCCTTTATTAGATTTTTGA

Protein sequence

>MS.gene52775.t1

MGGGKHQINKAHKSRFSSKSSRNIHKTSVKDRLAIVKNDRNIGKGARAARLQRNKMIREQKKAAVLKEKRELTGSKCPPRVIVLFALCATVDLEPLADDLLTLLSKESSAVRSGTIASSEYRTRVTVLKAPHGDLLSCMEMAKVADLLVFVASARSSYEDTDSYFTDSFGSQCLSVFRSLGLPSTAVFIRDLPTELKQRNELKKICTSSLASEFPEDCKFYPADTKDDLHKFLSLFKEQRLKTPHWRTQRSYLMANKVDTVYDGNSERCTLVLSGYLRARNLSVNQLVHVSGAGDFQLCKIEVLKDPFPLNSRKNQDLMDSDEVHDVEVIRTLVPDPDNQESLVAENTPDPLAGEQTWPTEAEIAKADEDQKQKKIRKRKLPAGTSEYQAAWIVDDSDDEESDCDNEDDDGMVLDEVDGFPGQEGNEYLDHDGDGASLRLGDSEDETDNDSVMMEVDNMTREKIQDELKELKEAHAADEEYPDEVDTPLDVPARKRFAKYRGLKSFRTSSWDPKESLPQDYAKIYEFDNFKRLQKHVLAKALELEKENREDCVPVGSYARLHIKEVPSAVASKLCIIAKTTPITTCGLLKHESKLSVLHFSVKKHETYDAPIKSKEELIFHVGEFINTDKNKMERFLHAGRFSVASIYAPISFPPLPTIVLKRVREDATPAVAAVGSLKTVDPDRIILKRVILTGYPQRVSKRKASVRHMFYNPEDVKWFKPVELYTKRGLRGRIKEPVGTHGAIKCLLNGVLEQRDTVCLNLFKRAYPKWPTRHFPLLDF