AlfalfaGEDB | MS.gene064831

M. sativa cultivar XinJiangDaYe / MS.gene064831

KEGG: K14799
GO: GO:0005575 GO:0005634 GO:0008150 GO:0022613 GO:0042254 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044085 GO:0071840 GO:0110165
PFAM: PF04950.15 PF08142.15

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene064831.t1	XP_013462264.1	96.5	793	16	1	1	781	1	793	0.00E+00	1497.3

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene064831.t1	Q5R434	37.5	800	441	19	3	771	7	778	4.6e-122	440.3

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene064831.t1	A0A072V2P5	96.5	793	16	1	1	781	1	793	0.0e+00	1497.3

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene058030	MS.gene064831	0.81788	2.62E-52	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene064831	MS.gene83444	PPI
MS.gene016898	MS.gene064831	PPI
MS.gene37608	MS.gene064831	PPI
MS.gene004704	MS.gene064831	PPI
MS.gene32092	MS.gene064831	PPI
MS.gene72768	MS.gene064831	PPI
MS.gene82426	MS.gene064831	PPI
MS.gene39781	MS.gene064831	PPI
MS.gene064831	MS.gene32091	PPI
MS.gene028153	MS.gene064831	PPI
MS.gene064831	MS.gene95471	PPI
MS.gene07159	MS.gene064831	PPI
MS.gene99744	MS.gene064831	PPI
MS.gene064831	MS.gene067809	PPI
MS.gene53720	MS.gene064831	PPI
MS.gene063209	MS.gene064831	PPI
MS.gene064831	MS.gene048789	PPI
MS.gene029242	MS.gene064831	PPI
MS.gene51111	MS.gene064831	PPI
MS.gene65479	MS.gene064831	PPI
MS.gene53789	MS.gene064831	PPI
MS.gene40019	MS.gene064831	PPI
MS.gene98889	MS.gene064831	PPI
MS.gene064831	MS.gene47032	PPI
MS.gene94183	MS.gene064831	PPI
MS.gene037902	MS.gene064831	PPI
MS.gene20679	MS.gene064831	PPI
MS.gene064831	MS.gene005653	PPI
MS.gene40020	MS.gene064831	PPI
MS.gene056257	MS.gene064831	PPI
MS.gene064831	MS.gene001986	PPI
MS.gene04368	MS.gene064831	PPI
MS.gene04128	MS.gene064831	PPI
MS.gene03006	MS.gene064831	PPI
MS.gene054186	MS.gene064831	PPI
MS.gene029825	MS.gene064831	PPI
MS.gene20681	MS.gene064831	PPI
MS.gene72163	MS.gene064831	PPI
MS.gene43350	MS.gene064831	PPI
MS.gene75013	MS.gene064831	PPI
MS.gene59369	MS.gene064831	PPI
MS.gene059422	MS.gene064831	PPI
MS.gene95472	MS.gene064831	PPI
MS.gene064831	MS.gene030418	PPI
MS.gene08205	MS.gene064831	PPI
MS.gene037324	MS.gene064831	PPI
MS.gene51868	MS.gene064831	PPI
MS.gene08073	MS.gene064831	PPI
MS.gene053381	MS.gene064831	PPI
MS.gene004705	MS.gene064831	PPI
MS.gene063568	MS.gene064831	PPI
MS.gene41916	MS.gene064831	PPI
MS.gene05721	MS.gene064831	PPI
MS.gene070323	MS.gene064831	PPI
MS.gene29719	MS.gene064831	PPI
MS.gene41329	MS.gene064831	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene064831.t1	MTR_3g115250	96.469	793	16	1	1	781	1	793	0.0	1575
MS.gene064831.t1	MTR_7g029115	69.946	742	148	9	56	778	1	686	0.0	984

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene064831.t1	AT1G42440	65.195	793	261	5	1	779	1	792	0.0	1061

Find 177 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATTATCAAACTCATAAATTT+TGG	0.146199	3.4:+98628640	None:intergenic
ATTCACAAAACCTCTGTTAA+AGG	0.169380	3.4:-98633867	MS.gene064831:intron
AACTATCTGTCCTTCATTTC+AGG	0.183357	3.4:-98628424	MS.gene064831:intron
GTCAATGCCTTTCTGTATTT+AGG	0.217493	3.4:-98632489	MS.gene064831:CDS
TTTGTTCAGGTTCATGTATC+AGG	0.277316	3.4:-98631750	MS.gene064831:intron
CGCTTAAGGATTATCCTATC+TGG	0.301245	3.4:+98627995	None:intergenic
TAACTCTTCCTTGGATTTGA+TGG	0.308367	3.4:+98628246	None:intergenic
TTTCTTGAATTCAAAGGAAA+TGG	0.310959	3.4:+98631684	None:intergenic
GATGAAGTAGATGGGTTTCC+AGG	0.319944	3.4:-98630377	MS.gene064831:CDS
CTTTCTGTATTTAGGTCTCT+TGG	0.321593	3.4:-98632481	MS.gene064831:CDS
TCGACTTCAGAGAAATAAAA+TGG	0.331413	3.4:-98633686	MS.gene064831:intron
CAATTAAGTGTCTTCTCAAC+GGG	0.331541	3.4:-98626479	MS.gene064831:CDS
GTGCAAAATTGAGGTTCTTA+AGG	0.338028	3.4:-98631709	MS.gene064831:CDS
AAAAGGCCACATGTTGTAAT+CGG	0.338518	3.4:+98628461	None:intergenic
CATCCTCTCTAACTCTCTTT+AGG	0.340352	3.4:+98628062	None:intergenic
ATAATCCAGAGGATGTTAAA+TGG	0.346023	3.4:-98627536	MS.gene064831:CDS
GAATCTTCTGCGGTGCGGTC+AGG	0.349242	3.4:-98633085	MS.gene064831:CDS
ATGAAATATTAACTCTTCCT+TGG	0.358498	3.4:+98628237	None:intergenic
TCTTGCTAAAGCTTTAGAAT+TGG	0.375060	3.4:-98628594	MS.gene064831:CDS
TTGAACCATTTAACATCCTC+TGG	0.377883	3.4:+98627531	None:intergenic
GGAAGAGGAGGAAATGAAAT+TGG	0.381099	3.4:+98628094	None:intergenic
TGCCGGCACTTCAGAATATC+AGG	0.386971	3.4:-98630622	MS.gene064831:intron
GATTCTTGATTGTCAGGATC+TGG	0.387784	3.4:+98631107	None:intergenic
ACTAAAGATTCTTGATTGTC+AGG	0.389261	3.4:+98631101	None:intergenic
GTTGTAGGTTGCTGATCTAC+TGG	0.391585	3.4:-98632578	MS.gene064831:intron
TCTTACTTCACCGATTCATT+TGG	0.393122	3.4:-98632514	MS.gene064831:CDS
ACAGGGGACTCAAGTCCTTC+AGG	0.396817	3.4:-98628790	MS.gene064831:CDS
ACTCTCTTTAGGACTATTGT+AGG	0.403962	3.4:+98628073	None:intergenic
AATCACGCGAGGAGGACATT+TGG	0.407524	3.4:+98633527	None:intergenic
AAGAGTTAATATTTCATGTT+GGG	0.407651	3.4:-98628231	MS.gene064831:intron
TGCTCTCCAGCAAGAGGATC+AGG	0.407999	3.4:+98631065	None:intergenic
TGCGATTACCAGTTGATTCA+CGG	0.409640	3.4:+98631826	None:intergenic
AATGACGGGTCGGCCACTTC+GGG	0.410035	3.4:+98626406	None:intergenic
CCTACTATCCTGCATGGAAA+TGG	0.428337	3.4:-98632696	MS.gene064831:CDS
GAAGATACAAGATGAACTTA+AGG	0.430075	3.4:-98629210	MS.gene064831:CDS
AAAGGCCACATGTTGTAATC+GGG	0.432239	3.4:+98628462	None:intergenic
AGTCCTTCAGGACTTCTTCA+TGG	0.433581	3.4:-98628778	MS.gene064831:CDS
AACTCTTCCTTGGATTTGAT+GGG	0.435274	3.4:+98628247	None:intergenic
AATACACCTGATCCTCTTGC+TGG	0.436387	3.4:-98631071	MS.gene064831:CDS
TTTGCAAACCGCTTCCTAGC+TGG	0.439369	3.4:+98628815	None:intergenic
CCATTTCCATGCAGGATAGT+AGG	0.442246	3.4:+98632696	None:intergenic
AGGGAAGCATCAAATCAATA+AGG	0.443579	3.4:-98633928	MS.gene064831:CDS
CTGTCAAAATAACACGCTTA+AGG	0.448236	3.4:+98627981	None:intergenic
TTTCCAACTGTGCAAAATTG+AGG	0.449112	3.4:-98631718	MS.gene064831:CDS
AAATGACGGGTCGGCCACTT+CGG	0.452153	3.4:+98626405	None:intergenic
TGGATAAAATTTACAGTCCT+CGG	0.454419	3.4:+98632243	None:intergenic
TAACCTCTCCGTGAATCAAC+TGG	0.462651	3.4:-98631834	MS.gene064831:intron
TTTGCTCTTTAAAGAGGGAC+AGG	0.469357	3.4:+98632075	None:intergenic
TCGCCCACGAAGACCACGTT+TGG	0.469644	3.4:+98627350	None:intergenic
TATACCAAACGTGGTCTTCG+TGG	0.470607	3.4:-98627354	MS.gene064831:CDS
GGAAGCGGTTTGCAAAATAC+AGG	0.472373	3.4:-98628808	MS.gene064831:CDS
TAAGCCTTTGCTCTTTAAAG+AGG	0.475551	3.4:+98632069	None:intergenic
TACTCATTTCCCTCTTGACC+TGG	0.477883	3.4:+98630359	None:intergenic
AATGGTGTATCCACTTCATC+AGG	0.477899	3.4:+98628845	None:intergenic
AACATACCGTGTGTACCAAC+AGG	0.482792	3.4:+98627318	None:intergenic
TACCTTAGCCATTTCCATGC+AGG	0.483045	3.4:+98632688	None:intergenic
AAGAGGATCAGGTGTATTCT+CGG	0.486750	3.4:+98631076	None:intergenic
AGATCGTCCTTTGTATCAGC+TGG	0.489015	3.4:+98632223	None:intergenic
ATATGCTAGGCTGCATATCA+AGG	0.493076	3.4:-98628534	MS.gene064831:CDS
TATATACACACCTGAAATGA+AGG	0.498018	3.4:+98628414	None:intergenic
TGATCCTCTTGCTGGAGAGC+AGG	0.499589	3.4:-98631063	MS.gene064831:intron
CGTTTGGTATAGAGCTCTAC+AGG	0.500904	3.4:+98627366	None:intergenic
CAATTGCCTCTTCTGAATAC+AGG	0.502229	3.4:-98633060	MS.gene064831:CDS
GAAGAGTTAATATTTCATGT+TGG	0.502923	3.4:-98628232	MS.gene064831:CDS
GTCCTTCAGGACTTCTTCAT+GGG	0.505346	3.4:-98628777	MS.gene064831:CDS
TGGTGTTGGATGAAGTAGAT+GGG	0.505680	3.4:-98630385	MS.gene064831:CDS
CAGGTTCATGTATCAGGTGC+AGG	0.506352	3.4:-98631744	MS.gene064831:CDS
AGCCTAGCATATGAGCCAAC+TGG	0.510335	3.4:+98628545	None:intergenic
AATCTTCTGCGGTGCGGTCA+GGG	0.510484	3.4:-98633084	MS.gene064831:CDS
GGATAAAATTTACAGTCCTC+GGG	0.510534	3.4:+98632244	None:intergenic
TTGATGCTTCCCTCCTCCCA+TGG	0.511308	3.4:+98633938	None:intergenic
TTTGCTATTTCAGCTTCCGT+TGG	0.516802	3.4:+98630693	None:intergenic
TAAATCCACAGTAGCACAAA+GGG	0.517278	3.4:+98633147	None:intergenic
ATGGAGAGGTTTCTCCATGC+TGG	0.517625	3.4:-98628145	MS.gene064831:CDS
AGAGGATGTTAAATGGTTCA+AGG	0.518162	3.4:-98627529	MS.gene064831:intron
AAAGGCTTAAAACTCCTCAT+TGG	0.520870	3.4:-98632055	MS.gene064831:CDS
TGAAAACCGTTGATCCAGAT+AGG	0.524381	3.4:-98628009	MS.gene064831:CDS
ATCTAATAAAGGAAAATGAC+GGG	0.525110	3.4:+98626392	None:intergenic
CAATGAAGATGATGATGGTA+TGG	0.528365	3.4:-98630405	MS.gene064831:CDS
GCATTGACTTCCAAATGAAT+CGG	0.531196	3.4:+98632504	None:intergenic
TCAATCATCACCATGGGAGG+AGG	0.532809	3.4:-98633948	None:intergenic
ATGGTGTTGGATGAAGTAGA+TGG	0.532968	3.4:-98630386	MS.gene064831:CDS
AGTAAGATGTACCGTTACTC+TGG	0.533325	3.4:+98633036	None:intergenic
TTTAGGACTATTGTAGGAAG+AGG	0.534660	3.4:+98628079	None:intergenic
AACAGCAGCCACTGCTGGTG+TGG	0.536206	3.4:+98628039	None:intergenic
TTCCAGTTGGCTCATATGCT+AGG	0.538547	3.4:-98628547	MS.gene064831:CDS
AGATGATGATGGTATGGTGT+TGG	0.539111	3.4:-98630399	MS.gene064831:CDS
CGAATAAAGACAGCAGTGCT+TGG	0.542983	3.4:+98632454	None:intergenic
AATCTAATAAAGGAAAATGA+CGG	0.546362	3.4:+98626391	None:intergenic
TTCCTAGCTGGAACATCCAA+TGG	0.546547	3.4:+98628827	None:intergenic
AAGCCTTTGCTCTTTAAAGA+GGG	0.548670	3.4:+98632070	None:intergenic
TGTCCCTCTTTAAAGAGCAA+AGG	0.550901	3.4:-98632073	MS.gene064831:CDS
TGGATGTTCCAGCTAGGAAG+CGG	0.553467	3.4:-98628823	MS.gene064831:CDS
TACCTGATATTCTGAAGTGC+CGG	0.557584	3.4:+98630620	None:intergenic
TGATATTCTGAAGTGCCGGC+AGG	0.559210	3.4:+98630624	None:intergenic
TATTTAGATCACGATGGCGA+TGG	0.561928	3.4:-98630338	MS.gene064831:CDS
AGAAGCACATGCTGCAGATG+AGG	0.564536	3.4:-98629180	MS.gene064831:CDS
ACACCAGCAGTGGCTGCTGT+TGG	0.565022	3.4:-98628037	MS.gene064831:CDS
AGGAAGTAGATAACATGACT+AGG	0.565206	3.4:-98629235	MS.gene064831:CDS
CAGGTCGACACGGTATATGA+TGG	0.565557	3.4:-98631905	MS.gene064831:CDS
TTAAACGTGCATACCCGAAG+TGG	0.566938	3.4:-98626419	MS.gene064831:CDS
ATCCTGCATGGAAATGGCTA+AGG	0.567897	3.4:-98632690	MS.gene064831:intron
GAACCAACAGCAGCCACTGC+TGG	0.569329	3.4:+98628034	None:intergenic
AGGACTATTGTAGGAAGAGG+AGG	0.571987	3.4:+98628082	None:intergenic
CAAGAGACCTAAATACAGAA+AGG	0.576022	3.4:+98632482	None:intergenic
TGATGAAGTGGATACACCAT+TGG	0.577749	3.4:-98628843	MS.gene064831:CDS
ATACCAAACGTGGTCTTCGT+GGG	0.578191	3.4:-98627353	MS.gene064831:CDS
TGACAATGATTCAGTGATGA+TGG	0.580300	3.4:-98630279	MS.gene064831:intron
AGAAAGAGGAAGCTTCCTGC+CGG	0.580799	3.4:-98630639	MS.gene064831:CDS
TGACTCTGATGACGAGGAGT+CGG	0.581992	3.4:-98630435	MS.gene064831:CDS
GATTATCCTATCTGGATCAA+CGG	0.583547	3.4:+98628003	None:intergenic
GCAATTAAGTGTCTTCTCAA+CGG	0.585539	3.4:-98626480	MS.gene064831:CDS
GGAAGTAGATAACATGACTA+GGG	0.586770	3.4:-98629234	MS.gene064831:CDS
CAATCATCACCATGGGAGGA+GGG	0.588445	3.4:-98633947	None:intergenic
TGATGCACCCATCAAATCCA+AGG	0.589101	3.4:-98628254	MS.gene064831:CDS
GAAGAACGAACCTTTAACAG+AGG	0.589133	3.4:+98633857	None:intergenic
AGATGGGTTTCCAGGTCAAG+AGG	0.591240	3.4:-98630369	MS.gene064831:CDS
GAAGCACATGCTGCAGATGA+GGG	0.593148	3.4:-98629179	MS.gene064831:intron
TCTACCTGCTCTCCAGCAAG+AGG	0.594437	3.4:+98631059	None:intergenic
AGTCCTAAAGAGAGTTAGAG+AGG	0.596044	3.4:-98628065	MS.gene064831:CDS
AATGACCGCAATATTGGCAA+AGG	0.600026	3.4:-98633721	MS.gene064831:CDS
CCCTAAATTACAGGTCGACA+CGG	0.600237	3.4:-98631915	MS.gene064831:intron
ATCTTACCTCATGGCTAACA+AGG	0.601088	3.4:-98632021	MS.gene064831:intron
TCTGGTCCTGTATTCAGAAG+AGG	0.604211	3.4:+98633054	None:intergenic
CAATCAATCATCACCATGGG+AGG	0.605426	3.4:-98633951	None:intergenic
AAACACAGACAAGAACAAGA+TGG	0.607069	3.4:-98628164	MS.gene064831:CDS
AACGGAAGCTGAAATAGCAA+AGG	0.610424	3.4:-98630691	MS.gene064831:CDS
AACTCAACGATCTTACCTCA+TGG	0.611394	3.4:-98632030	MS.gene064831:CDS
GATGGAGCTTCACTAAGACT+TGG	0.614741	3.4:-98630320	MS.gene064831:CDS
GTCAAAAGATCATCTGCAAG+TGG	0.617065	3.4:+98633121	None:intergenic
ATCCCATGAAGAAGTCCTGA+AGG	0.620725	3.4:+98628775	None:intergenic
AGAGGATGCCACACCAGCAG+TGG	0.621106	3.4:-98628047	MS.gene064831:CDS
GAAGCGGTTTGCAAAATACA+GGG	0.623219	3.4:-98628807	MS.gene064831:CDS
GAAGGTAACCGCTGAGAACG+AGG	0.626118	3.4:+98631864	None:intergenic
TGGTGACCTACTATCCTGCA+TGG	0.628570	3.4:-98632702	MS.gene064831:CDS
GATGGGTTTCCAGGTCAAGA+GGG	0.631294	3.4:-98630368	MS.gene064831:CDS
TGTAGAGTATCCTGATGAAG+TGG	0.631648	3.4:-98628855	MS.gene064831:intron
TTACCAGTTGATTCACGGAG+AGG	0.634966	3.4:+98631831	None:intergenic
AATAAAGGAAAATGACGGGT+CGG	0.635423	3.4:+98626396	None:intergenic
AGAGAGGACTGTGTTCCAGT+TGG	0.636400	3.4:-98628560	MS.gene064831:CDS
GAGCACCTTTGCCAATATTG+CGG	0.638112	3.4:+98633716	None:intergenic
TTGTTGCCAGACATGGCCAA+CGG	0.638255	3.4:-98630709	MS.gene064831:intron
TCTTGCCTCTGAGTTTCCCG+AGG	0.638569	3.4:-98632260	MS.gene064831:CDS
CAACTGAAAAGCGTCCAGCA+TGG	0.638608	3.4:+98628131	None:intergenic
TTCAAACCTTGTTAGCCATG+AGG	0.642327	3.4:+98632015	None:intergenic
CTAAATCCACAGTAGCACAA+AGG	0.644222	3.4:+98633146	None:intergenic
TTCAGATGAAGTGCATGATG+TGG	0.644636	3.4:-98631643	MS.gene064831:CDS
AAAGAACCTGTTGGTACACA+CGG	0.646711	3.4:-98627324	MS.gene064831:intron
CAGACAAGAACAAGATGGAG+AGG	0.647406	3.4:-98628159	MS.gene064831:CDS
CACCATTGGATGTTCCAGCT+AGG	0.649403	3.4:-98628829	MS.gene064831:CDS
GATCGTTGAGTTCTCCAATG+AGG	0.650248	3.4:+98632041	None:intergenic
GGGCGAATTAAAGAACCTGT+TGG	0.652133	3.4:-98627333	MS.gene064831:CDS
TGAATACAGGACCAGAGTAA+CGG	0.652860	3.4:-98633047	MS.gene064831:intron
TGTGACAATGAAGATGATGA+TGG	0.653424	3.4:-98630410	MS.gene064831:CDS
AAGGCCACATGTTGTAATCG+GGG	0.656159	3.4:+98628463	None:intergenic
ACAACCCCGATTACAACATG+TGG	0.659265	3.4:-98628467	MS.gene064831:CDS
TTTATTTCTCTGAAGTCGAG+CGG	0.660431	3.4:+98633690	None:intergenic
CAGGTACTAAAAGCACCTCA+TGG	0.661304	3.4:-98632722	MS.gene064831:CDS
GTTATCTAAAGAATCTTCTG+CGG	0.661401	3.4:-98633095	MS.gene064831:CDS
AGATGAAGTGCATGATGTGG+AGG	0.666002	3.4:-98631640	MS.gene064831:intron
CTAAAGAATCTTCTGCGGTG+CGG	0.670106	3.4:-98633090	MS.gene064831:CDS
TACAAAGGACGATCTTCACA+AGG	0.679750	3.4:-98632215	MS.gene064831:intron
TTACTCACAATCACGCGAGG+AGG	0.685766	3.4:+98633519	None:intergenic
ACAGTCCTCGGGAAACTCAG+AGG	0.686282	3.4:+98632255	None:intergenic
AAGGTAACCGCTGAGAACGA+GGG	0.686769	3.4:+98631865	None:intergenic
TTCATACGAAGACCTTGCAG+AGG	0.693755	3.4:+98632546	None:intergenic
CGGAGAGGTTACGAGCACGA+AGG	0.696764	3.4:+98631846	None:intergenic
ACACATGTTCTATAATCCAG+AGG	0.697379	3.4:-98627547	MS.gene064831:CDS
AATTTACTCACAATCACGCG+AGG	0.710656	3.4:+98633516	None:intergenic
AATGAGTATTTAGATCACGA+TGG	0.713624	3.4:-98630344	MS.gene064831:CDS
AAGCGGTTTGCAAAATACAG+GGG	0.725642	3.4:-98628806	MS.gene064831:CDS
AGATGCACCCTCGTTCTCAG+CGG	0.727564	3.4:-98631872	MS.gene064831:CDS
GTAGAGCTCTATACCAAACG+TGG	0.732540	3.4:-98627363	MS.gene064831:CDS
TGTTGATGACTCTGATGACG+AGG	0.734881	3.4:-98630441	MS.gene064831:CDS
CAGGATAGTAGGTCACCATG+AGG	0.742498	3.4:+98632707	None:intergenic
AATTAAGTGTCTTCTCAACG+GGG	0.760621	3.4:-98626478	MS.gene064831:CDS
TATCAAGGAAGTGCCCAGTG+CGG	0.762764	3.4:-98628519	MS.gene064831:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
chr3.4	gene	98626386	98633958	98626386	ID=MS.gene064831
chr3.4	mRNA	98626386	98633958	98626386	ID=MS.gene064831.t1;Parent=MS.gene064831
chr3.4	exon	98633868	98633958	98633868	ID=MS.gene064831.t1.exon1;Parent=MS.gene064831.t1
chr3.4	CDS	98633868	98633958	98633868	ID=cds.MS.gene064831.t1;Parent=MS.gene064831.t1
chr3.4	exon	98633687	98633763	98633687	ID=MS.gene064831.t1.exon2;Parent=MS.gene064831.t1
chr3.4	CDS	98633687	98633763	98633687	ID=cds.MS.gene064831.t1;Parent=MS.gene064831.t1
chr3.4	exon	98633527	98633604	98633527	ID=MS.gene064831.t1.exon3;Parent=MS.gene064831.t1
chr3.4	CDS	98633527	98633604	98633527	ID=cds.MS.gene064831.t1;Parent=MS.gene064831.t1
chr3.4	exon	98633048	98633179	98633048	ID=MS.gene064831.t1.exon4;Parent=MS.gene064831.t1
chr3.4	CDS	98633048	98633179	98633048	ID=cds.MS.gene064831.t1;Parent=MS.gene064831.t1
chr3.4	exon	98632691	98632741	98632691	ID=MS.gene064831.t1.exon5;Parent=MS.gene064831.t1
chr3.4	CDS	98632691	98632741	98632691	ID=cds.MS.gene064831.t1;Parent=MS.gene064831.t1
chr3.4	exon	98632453	98632593	98632453	ID=MS.gene064831.t1.exon6;Parent=MS.gene064831.t1
chr3.4	CDS	98632453	98632593	98632453	ID=cds.MS.gene064831.t1;Parent=MS.gene064831.t1
chr3.4	exon	98632216	98632338	98632216	ID=MS.gene064831.t1.exon7;Parent=MS.gene064831.t1
chr3.4	CDS	98632216	98632338	98632216	ID=cds.MS.gene064831.t1;Parent=MS.gene064831.t1
chr3.4	exon	98632022	98632099	98632022	ID=MS.gene064831.t1.exon8;Parent=MS.gene064831.t1
chr3.4	CDS	98632022	98632099	98632022	ID=cds.MS.gene064831.t1;Parent=MS.gene064831.t1
chr3.4	exon	98631835	98631924	98631835	ID=MS.gene064831.t1.exon9;Parent=MS.gene064831.t1
chr3.4	CDS	98631835	98631924	98631835	ID=cds.MS.gene064831.t1;Parent=MS.gene064831.t1
chr3.4	exon	98631641	98631763	98631641	ID=MS.gene064831.t1.exon10;Parent=MS.gene064831.t1
chr3.4	CDS	98631641	98631763	98631641	ID=cds.MS.gene064831.t1;Parent=MS.gene064831.t1
chr3.4	exon	98631064	98631147	98631064	ID=MS.gene064831.t1.exon11;Parent=MS.gene064831.t1
chr3.4	CDS	98631064	98631147	98631064	ID=cds.MS.gene064831.t1;Parent=MS.gene064831.t1
chr3.4	exon	98630623	98630721	98630623	ID=MS.gene064831.t1.exon12;Parent=MS.gene064831.t1
chr3.4	CDS	98630623	98630721	98630623	ID=cds.MS.gene064831.t1;Parent=MS.gene064831.t1
chr3.4	exon	98630280	98630474	98630280	ID=MS.gene064831.t1.exon13;Parent=MS.gene064831.t1
chr3.4	CDS	98630280	98630474	98630280	ID=cds.MS.gene064831.t1;Parent=MS.gene064831.t1
chr3.4	exon	98629180	98629255	98629180	ID=MS.gene064831.t1.exon14;Parent=MS.gene064831.t1
chr3.4	CDS	98629180	98629255	98629180	ID=cds.MS.gene064831.t1;Parent=MS.gene064831.t1
chr3.4	exon	98628769	98628872	98628769	ID=MS.gene064831.t1.exon15;Parent=MS.gene064831.t1
chr3.4	CDS	98628769	98628872	98628769	ID=cds.MS.gene064831.t1;Parent=MS.gene064831.t1
chr3.4	exon	98628425	98628684	98628425	ID=MS.gene064831.t1.exon16;Parent=MS.gene064831.t1
chr3.4	CDS	98628425	98628684	98628425	ID=cds.MS.gene064831.t1;Parent=MS.gene064831.t1
chr3.4	exon	98628232	98628297	98628232	ID=MS.gene064831.t1.exon17;Parent=MS.gene064831.t1
chr3.4	CDS	98628232	98628297	98628232	ID=cds.MS.gene064831.t1;Parent=MS.gene064831.t1
chr3.4	exon	98627980	98628195	98627980	ID=MS.gene064831.t1.exon18;Parent=MS.gene064831.t1
chr3.4	CDS	98627980	98628195	98627980	ID=cds.MS.gene064831.t1;Parent=MS.gene064831.t1
chr3.4	exon	98627530	98627608	98627530	ID=MS.gene064831.t1.exon19;Parent=MS.gene064831.t1
chr3.4	CDS	98627530	98627608	98627530	ID=cds.MS.gene064831.t1;Parent=MS.gene064831.t1
chr3.4	exon	98627325	98627388	98627325	ID=MS.gene064831.t1.exon20;Parent=MS.gene064831.t1
chr3.4	CDS	98627325	98627388	98627325	ID=cds.MS.gene064831.t1;Parent=MS.gene064831.t1
chr3.4	exon	98626386	98626504	98626386	ID=MS.gene064831.t1.exon21;Parent=MS.gene064831.t1
chr3.4	CDS	98626386	98626504	98626386	ID=cds.MS.gene064831.t1;Parent=MS.gene064831.t1

Gene Sequence

>MS.gene064831

ATGGGAGGAGGGAAGCATCAAATCAATAAGGCTCACAAGTCACGCTTCTCTTCTAAGTCTTCTCGCAACATTCACAAAACCTCTGTTAAAGGTTCGTTCTTCGTATTTTCAACATATCAAATGCTTTTTTCAATTTTTATAAATTTTTACATTTATAATTAATGTTTAGTTTTTGAATTGAATTGAATTGTTTAGATAGACTTGCAATCGTAAAAAATGACCGCAATATTGGCAAAGGTGCTCGTGCCGCTCGACTTCAGAGAAATAAAATGGTATTTTTTAATCTGTTTCAATGTTGCTGTTGTTTCTTTTCATTATATTTGCTTTCAGAATCATTGATTTGTAAATTTACAGATACGTGAGCAAAAAAAGGCTGCAGTCTTGAAAGAAAAAAGAGAATTGACTGGATCCAAATGTCCTCCTCGCGTGATTGTGAGTAAATTCATCCTCTCATTTCGATATGAATGCACTGTTTGGATAAACAGCTTAATTAAGCACTCCTATATAATTTTTTGCAACATAATACGGAACTAAGTATTTTTTTTAAGCTATAAGCTGATTTCATAAGCTATCCTAGAGAGCTGTTGGAAATAAACTTAAAACAGCTTATGTGCATGTGTTAAGCTGTTTCTACAAGTTTTCAAACAGGTTCACAAGTGTTTATGCTAGTAGATAAACTCATATAAGCCAATCCGAATAGGCCCTTATTCATCACATACTCATTTTGAATTCACTTTTACTGCACCCTCACATCCTTATTATTTTTTTGTTCCTTCCAGGTTCTTTTTGCCCTTTGTGCTACTGTGGATTTAGAACCACTTGCAGATGATCTTTTGACGTTGTTATCTAAAGAATCTTCTGCGGTGCGGTCAGGGACAATTGCCTCTTCTGAATACAGGACCAGAGTAACGGTACATCTTACTGCTGCCTTATTCTCTCAAAATTAGTTAATTTGTGGAGTCGTTTGTATATACAACATCGATTGAGTTAATTGCTACGATTTTTTTATTTTATGTATAATACTTAATAATAATTGTAATGATCTCAAGCTATGAATTTAGAATTCATAGTATAGACATGAACTTGTTTATTGAGAAATTAGGCAGTGGTTGTACTTCAAACATATGTTCAATTTGTATTTAATTATGTTTTTTGAATAGTCATTTCCCATGTATGTTTTAATGTACGGGATTTTACAACAATGTTATACGCCACAGGTACTAAAAGCACCTCATGGTGACCTACTATCCTGCATGGAAATGGCTAAGGTATTATCTATTGCTTTTAGCTTTTTTCAAGGATTTTAGTTTGAGGGTGTGGAAAACTTGGGTATGTGCTTACTGTTCGACACTATTTGTGTTGTAGGTTGCTGATCTACTGGTTTTTGTGGCCTCTGCAAGGTCTTCGTATGAAGATACTGATTCTTACTTCACCGATTCATTTGGAAGTCAATGCCTTTCTGTATTTAGGTCTCTTGGTTTACCAAGCACTGCTGTCTTTATTCGTGTAAGTTATGGTCATTCTTATTTTTGGAACTTATGGATTTACACGAGCTTACAATCATTTCACGAAGGAATTGACATTTAATCATTTATGCGGACTTCCATGTAATGCTTTCAGGATCTGCCAACCGAGCTAAAACAAAGAAATGAACTAAAGAAGATCTGTACATCTAGTCTTGCCTCTGAGTTTCCCGAGGACTGTAAATTTTATCCAGCTGATACAAAGGACGATCTTCACAAGGTAATTATTTCATTCATTCATGACGGAAAATTCCGATTCCACCTGCTGAATTTATCACCCATTGTATGCCCAGTTTTTGCCTAAGCCTTACACTTTTCTCATCTTTGCAATCACAGTTCCTGTCCCTCTTTAAAGAGCAAAGGCTTAAAACTCCTCATTGGAGAACTCAACGATCTTACCTCATGGCTAACAAGGTTTGAATTCATTATTTTGATCCAGATGTTTATTGATTCTATCAATTTACATATAGTTTTGCATATGCTTATCATGTTTTACCACCCTAAATTACAGGTCGACACGGTATATGATGGCAATTCTGAAAGATGCACCCTCGTTCTCAGCGGTTACCTTCGTGCTCGTAACCTCTCCGTGAATCAACTGGTAATCGCAAGATCATGGAATACATTTTAGTTCCATTTAGTTGTTTGTTGTCTCACATTTTGTTTGTTCAGGTTCATGTATCAGGTGCAGGAGATTTCCAACTGTGCAAAATTGAGGTTCTTAAGGATCCATTTCCTTTGAATTCAAGAAAAAATCAGGACTTGATGGATTCAGATGAAGTGCATGATGTGGAGGTATAGAGTTTTATCTAGTTTTCAACTAGACTGGTTAGGAACTCTTAAAGGAAGTGGCTTTTAAGATTGAGGTTCAATCTGGTTTTGCACATATATTATGTAAATATATAGCTGTATGTTAAAATGTATAATATGTACATATTCAGAAGGTAAGTAAAATAATGGCAATTAATATTGAATAACAATTTCAATTGGTAAATACCGTTTGTTCAAAAAATTGGTAAATACCGTTTTTTGTCAATCTGAAAACACCAACTCAGGTCCCTCTTAATTTTGATATACTGAAATTCCAAACCTTCTGTTCATGCAACACTTGGACATTATGATTTTTTTCTTACTCATATACCGTGTCGACCTGTTCATGCAACACTGTACATTATGATCTCAAACCACTTGGACATTATGATCTTTTTATACTCATTTAATCTCAAACCATTTATTTATACTTACATATTTACTTTTGCCTCATTTTTCCTACCTTTTAATGTTGTAGGTCATTCGTACTCTAGTTCCAGATCCTGACAATCAAGAATCTTTAGTTGCCGAGAATACACCTGATCCTCTTGCTGGAGAGCAGGTAGAATAAATTCTCATTTCTACTATTGCCATTTGTAAAATGTTATATTTGATTTACGAGGTTCAGTACTCATAATTTCTTAATGGACGTCATTTTAATTGATCATTAGAGTATTTTATAATTTTATTTTTTATATTATAGAATGGCAGTACAAGCTATGATGATTGGCTTGTAATTCAATCAGATGTTGCCTATTATCTGACTTCGCTTCACTATTTTAAGCCTAGAATTGGCCCAGTGTTTAAACAAATTAGTGGGTGCATTATCTGAATACCATGTGTTTATTTATTTGCAAGATTCTTTTGTTTAACGTTCTGGTATGATATTATTACTTGTTGCCAGACATGGCCAACGGAAGCTGAAATAGCAAAGGCTGATGAAGATCAAAAGCAAAAAAAGATAAGAAAGAGGAAGCTTCCTGCCGGCACTTCAGAATATCAGGTATGCGCTTGTATTCTTGTTTCACTTCTGATTGTTTTTTGGTCACCCTTATTGTTTTCAATACTCTTATTTGTATATATATGTTTTGACATTTCTGCTCATGAAGTATCTAGTATGGAAATAATAGGTATCTGGTATTTATTTTCAGGCTGCTTGGATTGTTGATGACTCTGATGACGAGGAGTCGGACTGTGACAATGAAGATGATGATGGTATGGTGTTGGATGAAGTAGATGGGTTTCCAGGTCAAGAGGGAAATGAGTATTTAGATCACGATGGCGATGGAGCTTCACTAAGACTTGGAGATTCTGAAGATGAAACTGACAATGATTCAGTGATGATGGTGAGCTTGTTAATACTTTTGCAACTCTAAAATAGTTATCCTTTAGACCTTTGTCCTCGTTGGACAGTTTCTTGTCCTTTATTTTGTTCCTGGCATTTGAACACTGTAAGTATTGGTAAGTTCTACTTAGGCTTTGTTTGGTTGGAGGGGAGGGGAAGGAAAGGCTTTGGGGGGACAAAAATATAGGGGAATTTAAGAATATTATTACAACATATATTAAATTTGAAGAATTCATATAAACCCCCCCAAACCCCCAAAAACCCTCCTCCAATACAATTTTTTAGTTCCCCCAAATGAGGAGGGTTTTATATTTTGAAGAAAAATAAGCCCCCCTAAGCCCTTCCTCCCATATGTCTTCTGTTTCTTCCACCTACTCCTTCCTTTTTTTTCCAAACTCTTCCTTCCCTTCCCCTCCAAACTCGCAAACAAAGCCTTAATCGAATCTCGCGAATCCGGTATTATGGATATTCAATTATTTTTGCGAGTTTTGCATTTACAGTATTTCAAATATTTTAAGGACACATGTTTTAATAATCCCGTCCCATTGCGGGGTGTCTGATTACTTTTCTCCTAAATTATTGGAAGGTATTTCTTCTTTTAAATGCATGTTTGTGTTTGAGTTTGGGATTTAATTGGCGTTGGTGCAAGACTTTATAACTTGTACCATTGAAAAAGTTCTTATAGAAAAAGTGCTTTAGACAATACCAAATGTTCATTGTATAAATAATTACTGTTTAAAACTTAAATTGCATCTTCAGATTAATGTATTTTGAGGTTAATAAACTTTTGTTGGCCGCATACAGAGAGAAATTATGAAAAAAAGTTATTATATTGCCCAATATTTTTCAAACATGGTGGTTATTTTTGTTTACTTAAAAAGTATATTATCCATCACTTTTAAGACAGTCAGCTCTCTTGGTAAACAATGTTGGATTATCTTTTTGCCAGATTAATTTTGATTTCCTTGGTGTCAGTGGATCATGGTCCATACCTTTATTGCATGATCACTATTTTGGGATTACAGGAAGTAGATAACATGACTAGGGAGAAGATACAAGATGAACTTAAGGAACTTAAAGAAGCACATGCTGCAGATGAGGGTATTTTTTTTCTTTTATTGTCTTATCAGTTTTATCACTATATATATGCCACACTTGCCTCTTTTTCGAAAAAGGCATGAAAGTATGGTCTGCTTTTTTGGTTGCTACTTTATATTTCATGTCCTGCCCTTGGCACTTTGTTGGGAATTTGACATAGATACCTTTTTTTGGATTTCCACCTTCGGGTTCCTACCTTTTGCCTTAGATGAGCAAGAATTGAGCCTTTATGGATGATTTGAAGTTGTATTGCTGGTATGATGATATTCTTATTGATTAGTTGCCTGCCATTTGTTTGTTGTTGGTGTAGAGTATCCTGATGAAGTGGATACACCATTGGATGTTCCAGCTAGGAAGCGGTTTGCAAAATACAGGGGACTCAAGTCCTTCAGGACTTCTTCATGGGATCCTAAAGTATGTTTGCCTTTTGGAGATTCTTTACAGCAATACATTGGTACTAAACAAGAAATAATAACCTGACATTTGTAATAATATCAGGAATCTCTACCTCAAGATTATGCCAAAATTTATGAGTTTGATAATTTTAAAAGACTACAAAAGCATGTTCTTGCTAAAGCTTTAGAATTGGAAAAAGAGAACAGAGAGGACTGTGTTCCAGTTGGCTCATATGCTAGGCTGCATATCAAGGAAGTGCCCAGTGCGGTTGCATCAAAATTATGTATAATTGCAAAGACAACCCCGATTACAACATGTGGCCTTTTGAAACACGAGTCAAAACTATCTGTCCTTCATTTCAGGTGTGTATATATGCTATATCATTTTACCATATTTGCTGTTTGTGCTTTTTAGTGCCCTCTCATCAAAAGTGGCTCTTTCTGAATATTTGAAAAATGTGTAATGAACAAAATCACTTGTGTTTTGTAGCGTGAAGAAGCATGAAACATATGATGCACCCATCAAATCCAAGGAAGAGTTAATATTTCATGTTGGGTTTCGGCAATTTGTTGGCAGACCAACTTTCTCTAGTGAGTTCATAAACACAGACAAGAACAAGATGGAGAGGTTTCTCCATGCTGGACGCTTTTCAGTTGCTTCAATTTATGCACCAATTTCATTTCCTCCTCTTCCTACAATAGTCCTAAAGAGAGTTAGAGAGGATGCCACACCAGCAGTGGCTGCTGTTGGTTCACTGAAAACCGTTGATCCAGATAGGATAATCCTTAAGCGTGTTATTTTGACAGGGTATGTTCATTTATTTTTGCCAAGGCCAAGATCCATCAACTGAAAACTTTTATATAATATTTCTTTATATCTCAATATTTTCTTAAGAGTATCTCAGTTTATCTCTTGGCATTAATTTCTATATTTATAAGTTGTAGACTATAGTCACGAGCTGTTTCCCCATTTATTCTTTTCTGAAACCCTATAATGTCAACAAAAAGCTTGCGTATTACTTATTGGTTCTATGGTCTTTTTGGTTGATGTCTTTGCATATCGAATTTGGGGGCAAAATGTAATTATTTTCATTTCAGAGTTGTTTGTGACATTCATGACAATCCACAACAAAATTACTGTCATGCTAATTAATAGTTTTTGAACATTTTGTGGTGCAGCTACCCCCAAAGAGTATCAAAACGTAAAGCTTCTGTGAGACACATGTTCTATAATCCAGAGGATGTTAAATGGTTCAAGGTAAGGAACAATTGTTGCCCAGTTTCTGAAATCATTAGATTTAATTTTGATGATTTGTAGAGTAATGAAAGAACTTGTTCTCTGGAAATTATCCTCAATTATCACCCTAACATGGTTTCTTAATGTGGGTGGTGGTTGCAGCCTGTAGAGCTCTATACCAAACGTGGTCTTCGTGGGCGAATTAAAGAACCTGTTGGTACACACGGTATGTTATGTTGCAAACCCTTATTGCCAATCTTCTTACTATGAACTTTCAGGCAGATACTCATTTTAGGGAGAAACTGATTATTTTATTGCTTCATTAATGACGGGCTTGTTTGTTGTTGCATTCCATGAATCTCATCATGACTCATTTTTTTAATGTTATATTGTAATTTTCTTATCCTGGTAAAATCTTTGTTTCAAATGGATTTTGCTATGCCGTTGATTTGAATTTACCTCCTACCTCATGTTCTTGTTAAGACGAGTAGATCTGATAAATTACAATTATTAGATCTGCCCCATTATTCGATATTGATTGAAATGATTGTTTGCCATGGGAAATCTTCACTGTTGGAAACACAATTGTGCCCATTTATGATTTTTTTTTTTTTTTTTTTATGCTTAGCTTCATAGCTTTTTGAAGATATATTATATTCTTCTGTGAAAGTTCTGCTGTAAGTACTGTCTAGTTCATTAGAATTATTACACATTGGGGTTTGATAAATATAAAAATGGTGCTAATGAAAAGGATAGATGAAACGAGTGATAAGGTACTTATGAAAAGGATAGATGAGACGAGTGATAAAAGTAAAGGCCGGAAAATATTTTCCTTAGCATGCCGCGCGGGTTGATAAATATAAAAATTAATCTTACTGAACTAATGACAATCAATTAGTTGTTTATTATTTTGTTGACTAAATGTAAATTCCCCGTGTATGTTTTTTTGCAATTGTTTTTTGGTTCATGTTTCAGCTTGCTTGTAGTCATTAGCATTCTCAAATAAATGTAGGATACCTATTGATCGTATTCTGTTTATTGTTCAGGAGCAATTAAGTGTCTTCTCAACGGGGTTCTTGAACAGCGTGATACTGTATGTTTGAATTTATTTAAACGTGCATACCCGAAGTGGCCGACCCGTCATTTTCCTTTATTAGATTTTTGA

Protein sequence

>MS.gene064831.t1

MGGGKHQINKAHKSRFSSKSSRNIHKTSVKDRLAIVKNDRNIGKGARAARLQRNKMIREQKKAAVLKEKRELTGSKCPPRVIVLFALCATVDLEPLADDLLTLLSKESSAVRSGTIASSEYRTRVTVLKAPHGDLLSCMEMAKVADLLVFVASARSSYEDTDSYFTDSFGSQCLSVFRSLGLPSTAVFIRDLPTELKQRNELKKICTSSLASEFPEDCKFYPADTKDDLHKFLSLFKEQRLKTPHWRTQRSYLMANKVDTVYDGNSERCTLVLSGYLRARNLSVNQLVHVSGAGDFQLCKIEVLKDPFPLNSRKNQDLMDSDEVHDVEVIRTLVPDPDNQESLVAENTPDPLAGEQTWPTEAEIAKADEDQKQKKIRKRKLPAGTSEYQAAWIVDDSDDEESDCDNEDDDGMVLDEVDGFPGQEGNEYLDHDGDGASLRLGDSEDETDNDSVMMEVDNMTREKIQDELKELKEAHAADEEYPDEVDTPLDVPARKRFAKYRGLKSFRTSSWDPKESLPQDYAKIYEFDNFKRLQKHVLAKALELEKENREDCVPVGSYARLHIKEVPSAVASKLCIIAKTTPITTCGLLKHESKLSVLHFSVKKHETYDAPIKSKEELIFHVGEFINTDKNKMERFLHAGRFSVASIYAPISFPPLPTIVLKRVREDATPAVAAVGSLKTVDPDRIILKRVILTGYPQRVSKRKASVRHMFYNPEDVKWFKPVELYTKRGLRGRIKEPVGTHGAIKCLLNGVLEQRDTVCLNLFKRAYPKWPTRHFPLLDF